Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:06:12 (831859): wrapper (7.7.26015): starting
23:06:12 (831859): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 23:06:12] Arguments: --nthreads 9
[2026-01-10 23:06:12] Threads: 9
[2026-01-10 23:06:12] Checking for CVMFS
[2026-01-10 23:06:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 23:06:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 23:06:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 23:06:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 23:06:13] 2.13.3.0 14328 95766 159540 155002 2 386 39698724 40960000 27083 16776704 0 921179123 99.687 759810637 49942 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 23:06:13] CVMFS is ok
[2026-01-10 23:06:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 23:06:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 23:06:13] Further information can be found at the LHC@home message board.
[2026-01-10 23:06:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 23:06:13] Checking for apptainer binary...
[2026-01-10 23:06:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 23:06:13] Running /usr/bin/apptainer --version
[2026-01-10 23:06:13] apptainer version 1.4.5-2.el9
[2026-01-10 23:06:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 23:06:14] c8-16-2.aglt2.org
[2026-01-10 23:06:14] apptainer works
[2026-01-10 23:06:14] Set ATHENA_PROC_NUMBER=9
[2026-01-10 23:06:14] Set ATHENA_CORE_NUMBER=9
[2026-01-10 23:06:14] Starting ATLAS job with PandaID=6965941383
[2026-01-10 23:06:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 01:13:38]  *** The last 200 lines of the pilot log: ***
[2026-01-11 01:13:38] 2026-01-11 06:13:04,996 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 01:13:38] 2026-01-11 06:13:05,001 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3756.283093749999
[2026-01-11 01:13:38] 2026-01-11 06:13:05,013 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965941383/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 01:13:38] 2026-01-11 06:13:05,014 | INFO     | extracted standard info from prmon json
[2026-01-11 01:13:38] 2026-01-11 06:13:05,014 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 01:13:38] 2026-01-11 06:13:05,014 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 01:13:38] 2026-01-11 06:13:05,014 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 01:13:38] 2026-01-11 06:13:05,014 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 01:13:38] 2026-01-11 06:13:05,016 | INFO     | fitting pss+swap vs Time
[2026-01-11 01:13:38] 2026-01-11 06:13:05,016 | INFO     | sum of square deviations: 576985702.0
[2026-01-11 01:13:38] 2026-01-11 06:13:05,016 | INFO     | sum of deviations: 16115745611.000004
[2026-01-11 01:13:38] 2026-01-11 06:13:05,016 | INFO     | mean x: 1768108220.0
[2026-01-11 01:13:38] 2026-01-11 06:13:05,017 | INFO     | mean y: 2618002.5203252034
[2026-01-11 01:13:38] 2026-01-11 06:13:05,017 | INFO     | intersect: -49382283889.27392
[2026-01-11 01:13:38] 2026-01-11 06:13:05,017 | INFO     | chi2: 1.4505143084992138
[2026-01-11 01:13:38] 2026-01-11 06:13:05,017 | INFO     | sum of square deviations: 509440249.5
[2026-01-11 01:13:38] 2026-01-11 06:13:05,017 | INFO     | sum of deviations: 15424113733.499998
[2026-01-11 01:13:38] 2026-01-11 06:13:05,017 | INFO     | mean x: 1768108067.5
[2026-01-11 01:13:38] 2026-01-11 06:13:05,017 | INFO     | mean y: 2616455.533898305
[2026-01-11 01:13:38] 2026-01-11 06:13:05,017 | INFO     | intersect: -53529667169.493835
[2026-01-11 01:13:38] 2026-01-11 06:13:05,017 | INFO     | chi2: 1.452129516406358
[2026-01-11 01:13:38] 2026-01-11 06:13:05,017 | INFO     | current chi2=1.452129516406358 (change=-0.11135415195009535 %)
[2026-01-11 01:13:38] 2026-01-11 06:13:05,017 | INFO     | right removable region: 117
[2026-01-11 01:13:38] 2026-01-11 06:13:05,017 | INFO     | sum of square deviations: 509440249.5
[2026-01-11 01:13:38] 2026-01-11 06:13:05,018 | INFO     | sum of deviations: -3892477832.0000005
[2026-01-11 01:13:38] 2026-01-11 06:13:05,018 | INFO     | mean x: 1768108372.5
[2026-01-11 01:13:38] 2026-01-11 06:13:05,018 | INFO     | mean y: 2662441.3220338984
[2026-01-11 01:13:38] 2026-01-11 06:13:05,018 | INFO     | intersect: 13512240161.740942
[2026-01-11 01:13:38] 2026-01-11 06:13:05,018 | INFO     | chi2: 0.023421034023251085
[2026-01-11 01:13:38] 2026-01-11 06:13:05,018 | INFO     | current chi2=0.023421034023251085 (change=98.38532899082645 %)
[2026-01-11 01:13:38] 2026-01-11 06:13:05,018 | INFO     | sum of square deviations: 447383272.0
[2026-01-11 01:13:38] 2026-01-11 06:13:05,018 | INFO     | sum of deviations: -5305841793.0
[2026-01-11 01:13:38] 2026-01-11 06:13:05,018 | INFO     | mean x: 1768108525.0
[2026-01-11 01:13:38] 2026-01-11 06:13:05,018 | INFO     | mean y: 2665857.203539823
[2026-01-11 01:13:38] 2026-01-11 06:13:05,019 | INFO     | intersect: 20971943641.25217
[2026-01-11 01:13:38] 2026-01-11 06:13:05,019 | INFO     | chi2: 0.011478957245344252
[2026-01-11 01:13:38] 2026-01-11 06:13:05,019 | INFO     | current chi2=0.011478957245344252 (change=50.98868293368864 %)
[2026-01-11 01:13:38] 2026-01-11 06:13:05,019 | INFO     | sum of square deviations: 390582207.0
[2026-01-11 01:13:38] 2026-01-11 06:13:05,019 | INFO     | sum of deviations: -5541937748.5
[2026-01-11 01:13:38] 2026-01-11 06:13:05,019 | INFO     | mean x: 1768108677.5
[2026-01-11 01:13:38] 2026-01-11 06:13:05,019 | INFO     | mean y: 2666481.8796296297
[2026-01-11 01:13:38] 2026-01-11 06:13:05,019 | INFO     | intersect: 25090210275.92569
[2026-01-11 01:13:38] 2026-01-11 06:13:05,019 | INFO     | chi2: 0.009135779993710487
[2026-01-11 01:13:38] 2026-01-11 06:13:05,019 | INFO     | current chi2=0.009135779993710487 (change=20.41280581112133 %)
[2026-01-11 01:13:38] 2026-01-11 06:13:05,019 | INFO     | left removable region: 30
[2026-01-11 01:13:38] 2026-01-11 06:13:05,019 | INFO     | sum of square deviations: 204163828.0
[2026-01-11 01:13:38] 2026-01-11 06:13:05,020 | INFO     | sum of deviations: -3840698653.0
[2026-01-11 01:13:38] 2026-01-11 06:13:05,020 | INFO     | mean x: 1768108952.0
[2026-01-11 01:13:38] 2026-01-11 06:13:05,020 | INFO     | mean y: 2661993.6551724137
[2026-01-11 01:13:38] 2026-01-11 06:13:05,020 | INFO     | intersect: 33264056711.938187
[2026-01-11 01:13:38] 2026-01-11 06:13:05,020 | INFO     | chi2: 0.006786472105912481
[2026-01-11 01:13:38] 2026-01-11 06:13:05,020 | INFO     | current memory leak: -18.81 B/s (using 87 data points, chi2=0.01)
[2026-01-11 01:13:38] 2026-01-11 06:13:05,020 | INFO     | could have reported an average CPU frequency of 3793 MHz (8 samples)
[2026-01-11 01:13:38] 2026-01-11 06:13:05,020 | INFO     | ..............................
[2026-01-11 01:13:38] 2026-01-11 06:13:05,020 | INFO     | . Timing measurements:
[2026-01-11 01:13:38] 2026-01-11 06:13:05,020 | INFO     | . get job = 0 s
[2026-01-11 01:13:38] 2026-01-11 06:13:05,020 | INFO     | . initial setup = 2 s
[2026-01-11 01:13:38] 2026-01-11 06:13:05,020 | INFO     | . payload setup = 24 s
[2026-01-11 01:13:38] 2026-01-11 06:13:05,020 | INFO     | . stage-in = 0 s
[2026-01-11 01:13:38] 2026-01-11 06:13:05,020 | INFO     | . payload execution = 7489 s
[2026-01-11 01:13:38] 2026-01-11 06:13:05,020 | INFO     | . stage-out = 0 s
[2026-01-11 01:13:38] 2026-01-11 06:13:05,020 | INFO     | . log creation = 0 s
[2026-01-11 01:13:38] 2026-01-11 06:13:05,021 | INFO     | ..............................
[2026-01-11 01:13:38] 2026-01-11 06:13:05,071 | INFO     | 
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | job summary report
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | --------------------------------------------------
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | PanDA job id: 6965941383
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | task id: 48039250
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | errors: (none)
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | pilot state: finished 
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | transexitcode: 0
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | exeerrorcode: 0
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | exeerrordiag: 
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | exitcode: 0
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | exitmsg: OK
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | cpuconsumptiontime: 31981 s
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | nevents: 400
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | neventsw: 0
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | pid: 872985
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | pgrp: 872985
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | corecount: 9
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | event service: False
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | sizes: {0: 2284025, 11: 2284025, 17: 2284315, 22: 2284343, 7517: 2312030, 7519: 2321028, 7522: 2321212, 7526: 2321406}
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | --------------------------------------------------
[2026-01-11 01:13:38] 2026-01-11 06:13:05,072 | INFO     | 
[2026-01-11 01:13:38] 2026-01-11 06:13:05,073 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-11 01:13:38] 2026-01-11 06:13:05,091 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 01:13:38] 2026-01-11 06:13:05,091 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 01:13:38] 2026-01-11 06:13:05,091 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 01:13:38] 2026-01-11 06:13:05,091 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 01:13:38] 2026-01-11 06:13:05,091 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 01:13:38] 2026-01-11 06:13:05,091 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 01:13:38] 2026-01-11 06:13:05,091 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 01:13:38] 2026-01-11 06:13:05,091 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 01:13:38] 2026-01-11 06:13:05,091 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 01:13:38] 2026-01-11 06:13:05,091 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 01:13:38] 2026-01-11 06:13:05,091 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 01:13:38] 2026-01-11 06:13:05,091 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 01:13:38] 2026-01-11 06:13:05,091 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 01:13:38] 2026-01-11 06:13:05,092 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 01:13:38] 2026-01-11 06:13:05,092 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 01:13:38] 2026-01-11 06:13:05,092 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 01:13:38] 2026-01-11 06:13:05,092 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 01:13:38] 2026-01-11 06:13:05,092 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 01:13:38] 2026-01-11 06:13:05,092 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 01:13:38] 2026-01-11 06:13:05,092 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 01:13:38] 2026-01-11 06:13:05,092 | INFO     | job 6965941383 has completed (purged errors)
[2026-01-11 01:13:38] 2026-01-11 06:13:05,092 | INFO     | overall cleanup function is called
[2026-01-11 01:13:38] 2026-01-11 06:13:06,099 | INFO     | --- collectZombieJob: --- 10, [872985]
[2026-01-11 01:13:38] 2026-01-11 06:13:06,100 | INFO     | zombie collector waiting for pid 872985
[2026-01-11 01:13:38] 2026-01-11 06:13:06,100 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 01:13:38] 2026-01-11 06:13:06,100 | INFO     | collected zombie processes
[2026-01-11 01:13:38] 2026-01-11 06:13:06,100 | INFO     | will attempt to kill all subprocesses of pid=872985
[2026-01-11 01:13:38] 2026-01-11 06:13:06,455 | INFO     | process IDs to be killed: [872985] (in reverse order)
[2026-01-11 01:13:38] 2026-01-11 06:13:06,596 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 01:13:38] 2026-01-11 06:13:06,596 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 01:13:38] 2026-01-11 06:13:06,617 | INFO     | did not find any defunct processes belonging to 872985
[2026-01-11 01:13:38] 2026-01-11 06:13:06,637 | INFO     | did not find any defunct processes belonging to 872985
[2026-01-11 01:13:38] 2026-01-11 06:13:06,638 | INFO     | ready for new job
[2026-01-11 01:13:38] 2026-01-11 06:13:06,638 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 01:13:38] 2026-01-11 06:13:06,640 | INFO     | ***************************************
[2026-01-11 01:13:38] 2026-01-11 06:13:06,641 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 01:13:38] 2026-01-11 06:13:06,641 | INFO     | ***************************************
[2026-01-11 01:13:38] 2026-01-11 06:13:06,641 | INFO     | 
[2026-01-11 01:13:38] 2026-01-11 06:13:06,646 | INFO     | architecture information:
[2026-01-11 01:13:38] 2026-01-11 06:13:06,646 | INFO     | executing command: cat /etc/os-release
[2026-01-11 01:13:38] 2026-01-11 06:13:06,661 | INFO     | cat /etc/os-release:
[2026-01-11 01:13:38] NAME="CentOS Linux"
[2026-01-11 01:13:38] VERSION="7 (Core)"
[2026-01-11 01:13:38] ID="centos"
[2026-01-11 01:13:38] ID_LIKE="rhel fedora"
[2026-01-11 01:13:38] VERSION_ID="7"
[2026-01-11 01:13:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 01:13:38] ANSI_COLOR="0;31"
[2026-01-11 01:13:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 01:13:38] HOME_URL="https://www.centos.org/"
[2026-01-11 01:13:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 01:13:38] 
[2026-01-11 01:13:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 01:13:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 01:13:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 01:13:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 01:13:38] 
[2026-01-11 01:13:38] 2026-01-11 06:13:06,661 | INFO     | ***************************************
[2026-01-11 01:13:38] 2026-01-11 06:13:07,164 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-11 01:13:38] 2026-01-11 06:13:07,181 | INFO     | sufficient remaining disk space (172240142336 B)
[2026-01-11 01:13:38] 2026-01-11 06:13:07,182 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 01:13:38] 2026-01-11 06:13:07,182 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 01:13:38] 2026-01-11 06:13:07,182 | INFO     | update_server=False
[2026-01-11 01:13:38] 2026-01-11 06:13:07,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 01:13:38] 2026-01-11 06:13:07,182 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 01:13:38] 2026-01-11 06:13:07,348 | INFO     | all data control threads have been joined
[2026-01-11 01:13:38] 2026-01-11 06:13:07,436 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 01:13:38] 2026-01-11 06:13:07,436 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 01:13:38] 2026-01-11 06:13:07,436 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 01:13:38] 2026-01-11 06:13:07,436 | INFO     | will abort loop
[2026-01-11 01:13:38] 2026-01-11 06:13:08,055 | INFO     | all payload control threads have been joined
[2026-01-11 01:13:38] 2026-01-11 06:13:08,183 | INFO     | [job] retrieve thread has finished
[2026-01-11 01:13:38] 2026-01-11 06:13:08,226 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 01:13:38] 2026-01-11 06:13:08,287 | INFO     | [job] validate thread has finished
[2026-01-11 01:13:38] 2026-01-11 06:13:08,354 | INFO     | [data] control thread has finished
[2026-01-11 01:13:38] 2026-01-11 06:13:08,442 | INFO     | [job] job monitor thread has finished
[2026-01-11 01:13:38] 2026-01-11 06:13:08,451 | INFO     | all job control threads have been joined
[2026-01-11 01:13:38] 2026-01-11 06:13:08,561 | INFO     | [data] copytool_in thread has finished
[2026-01-11 01:13:38] 2026-01-11 06:13:08,731 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 01:13:38] 2026-01-11 06:13:08,903 | INFO     | [payload] failed_post thread has finished
[2026-01-11 01:13:38] 2026-01-11 06:13:08,989 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 01:13:38] 2026-01-11 06:13:09,060 | INFO     | [payload] control thread has finished
[2026-01-11 01:13:38] 2026-01-11 06:13:09,165 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 01:13:38] 2026-01-11 06:13:09,458 | INFO     | [job] control thread has finished
[2026-01-11 01:13:38] 2026-01-11 06:13:09,594 | INFO     | [payload] validate_post thread has finished
[2026-01-11 01:13:38] 2026-01-11 06:13:09,662 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 01:13:38] 2026-01-11 06:13:10,052 | INFO     | [monitor] cgroup control has ended
[2026-01-11 01:13:38] 2026-01-11 06:13:10,082 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 01:13:38] 2026-01-11 06:13:10,227 | INFO     | [data] copytool_out thread has finished
[2026-01-11 01:13:38] 2026-01-11 06:13:11,087 | INFO     | [job] queue monitor thread has finished
[2026-01-11 01:13:38] 2026-01-11 06:13:11,188 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 01:13:38] 2026-01-11 06:13:12,294 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139650082596672)>', '<ExcThread(monitor, started 139649292945152)>']
[2026-01-11 01:13:38] 2026-01-11 06:13:17,304 | INFO     | all workflow threads have been joined
[2026-01-11 01:13:38] 2026-01-11 06:13:17,304 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 01:13:38] 2026-01-11 06:13:17,304 | INFO     | traces error code: 0
[2026-01-11 01:13:38] 2026-01-11 06:13:17,304 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 01:13:38] 2026-01-11 06:13:38,229 | INFO     | PID=852707 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 01:13:38] 2026-01-11 06:13:38,230 | INFO     | .. there are 22 such processes running
[2026-01-11 01:13:38] 2026-01-11 06:13:38,231 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 01:13:38] 2026-01-11 06:13:38,231 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 01:13:38] 2026-01-11 06:13:38,231 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 01:13:38] 2026-01-11 06:13:38,231 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 01:13:38] 2026-01-11 06:13:38,231 | INFO     | [monitor] control thread has ended
[2026-01-11 01:13:38] 2026-01-11 06:13:38,392 [wrapper] ==== pilot stdout END ====
[2026-01-11 01:13:38] 2026-01-11 06:13:38,397 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 01:13:38] 2026-01-11 06:13:38,400 [wrapper] pilotpid: 852707
[2026-01-11 01:13:38] 2026-01-11 06:13:38,403 [wrapper] Pilot exit status: 0
[2026-01-11 01:13:38] 2026-01-11 06:13:38,414 [wrapper] pandaids: 6965941383
[2026-01-11 01:13:38] 2026-01-11 06:13:38,520 [wrapper] cleanup supervisor_pilot 1352781 852708
[2026-01-11 01:13:38] 2026-01-11 06:13:38,523 [wrapper] Test setup, not cleaning
[2026-01-11 01:13:38] 2026-01-11 06:13:38,527 [wrapper] apfmon messages muted
[2026-01-11 01:13:38] 2026-01-11 06:13:38,530 [wrapper] ==== wrapper stdout END ====
[2026-01-11 01:13:38] 2026-01-11 06:13:38,533 [wrapper] ==== wrapper stderr END ====
[2026-01-11 01:13:38]  *** Error codes and diagnostics ***
[2026-01-11 01:13:38]     "exeErrorCode": 0,
[2026-01-11 01:13:38]     "exeErrorDiag": "",
[2026-01-11 01:13:38]     "pilotErrorCode": 0,
[2026-01-11 01:13:38]     "pilotErrorDiag": "",
[2026-01-11 01:13:38]  *** Listing of results directory ***
[2026-01-11 01:13:38] total 1164796
[2026-01-11 01:13:38] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-11 01:13:38] -rwx------. 1 boincer umatlas     36322 Jan 10 22:30 runpilot2-wrapper.sh
[2026-01-11 01:13:38] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 22:30 queuedata.json
[2026-01-11 01:13:38] -rw-r--r--. 1 boincer umatlas       100 Jan 10 23:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 01:13:38] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 23:06 run_atlas
[2026-01-11 01:13:38] -rw-r--r--. 1 boincer umatlas       105 Jan 10 23:06 job.xml
[2026-01-11 01:13:38] -rw-r--r--. 2 boincer umatlas 926669133 Jan 10 23:06 EVNT.48039248._000029.pool.root.1
[2026-01-11 01:13:38] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 23:06 start_atlas.sh
[2026-01-11 01:13:38] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 23:06 shared
[2026-01-11 01:13:38] -rw-r--r--. 2 boincer umatlas    592421 Jan 10 23:06 input.tar.gz
[2026-01-11 01:13:38] -rw-r--r--. 1 boincer umatlas         0 Jan 10 23:06 boinc_lockfile
[2026-01-11 01:13:38] -rw-r--r--. 1 boincer umatlas      2591 Jan 10 23:06 pandaJob.out
[2026-01-11 01:13:38] -rw-------. 1 boincer umatlas        57 Jan 10 23:06 setup.sh.local
[2026-01-11 01:13:38] -rw-------. 1 boincer umatlas    989548 Jan 10 23:06 agis_schedconf.cvmfs.json
[2026-01-11 01:13:38] -rw-------. 1 boincer umatlas   1516240 Jan 10 23:06 agis_ddmendpoints.agis.ALL.json
[2026-01-11 01:13:38] drwx------. 5 boincer umatlas      4096 Jan 10 23:06 pilot3
[2026-01-11 01:13:38] -rw-r--r--. 1 boincer umatlas      7172 Jan 11 01:10 init_data.xml
[2026-01-11 01:13:38] -rw-------. 1 boincer umatlas 259312390 Jan 11 01:12 HITS.48039250._006947.pool.root.1
[2026-01-11 01:13:38] -rw-r--r--. 1 boincer umatlas       530 Jan 11 01:12 boinc_task_state.xml
[2026-01-11 01:13:38] -rw-------. 1 boincer umatlas      1033 Jan 11 01:12 memory_monitor_summary.json
[2026-01-11 01:13:38] -rw-------. 1 boincer umatlas    402407 Jan 11 01:12 log.48039250._006947.job.log.tgz.1
[2026-01-11 01:13:38] -rw-------. 1 boincer umatlas      7774 Jan 11 01:13 heartbeat.json
[2026-01-11 01:13:38] -rw-r--r--. 1 boincer umatlas        27 Jan 11 01:13 wrapper_checkpoint.txt
[2026-01-11 01:13:38] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 01:13 boinc_mmap_file
[2026-01-11 01:13:38] -rw-------. 1 boincer umatlas       822 Jan 11 01:13 pilotlog.txt
[2026-01-11 01:13:38] -rw-------. 1 boincer umatlas        95 Jan 11 01:13 pilot_heartbeat.json
[2026-01-11 01:13:38] -rw-------. 1 boincer umatlas   1025262 Jan 11 01:13 log.48039250._006947.job.log.1
[2026-01-11 01:13:38] -rw-------. 1 boincer umatlas       357 Jan 11 01:13 output.list
[2026-01-11 01:13:38] -rw-r--r--. 1 boincer umatlas       620 Jan 11 01:13 runtime_log
[2026-01-11 01:13:38] -rw-------. 1 boincer umatlas   1443840 Jan 11 01:13 result.tar.gz
[2026-01-11 01:13:38] -rw-r--r--. 1 boincer umatlas      9337 Jan 11 01:13 runtime_log.err
[2026-01-11 01:13:38] -rw-------. 1 boincer umatlas       652 Jan 11 01:13 GnCLDmGL1y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsymKDmYoT3tm.diag
[2026-01-11 01:13:38] -rw-r--r--. 1 boincer umatlas     21088 Jan 11 01:13 stderr.txt
[2026-01-11 01:13:38] HITS file was successfully produced:
[2026-01-11 01:13:38] -rw-------. 1 boincer umatlas 259312390 Jan 11 01:12 shared/HITS.pool.root.1
[2026-01-11 01:13:38]  *** Contents of shared directory: ***
[2026-01-11 01:13:38] total 1160204
[2026-01-11 01:13:38] -rw-r--r--. 2 boincer umatlas 926669133 Jan 10 23:06 ATLAS.root_0
[2026-01-11 01:13:38] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 23:06 start_atlas.sh
[2026-01-11 01:13:38] -rw-r--r--. 2 boincer umatlas    592421 Jan 10 23:06 input.tar.gz
[2026-01-11 01:13:38] -rw-------. 1 boincer umatlas 259312390 Jan 11 01:12 HITS.pool.root.1
[2026-01-11 01:13:38] -rw-------. 1 boincer umatlas   1443840 Jan 11 01:13 result.tar.gz
01:13:40 (831859): run_atlas exited; CPU time 32181.677791
01:13:40 (831859): called boinc_finish(0)

</stderr_txt>
]]>

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