Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:56:17 (1663032): wrapper (7.7.26015): starting
22:56:17 (1663032): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 22:56:17] Arguments: --nthreads 9
[2026-01-10 22:56:17] Threads: 9
[2026-01-10 22:56:17] Checking for CVMFS
[2026-01-10 22:56:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 22:56:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 22:56:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 22:56:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 22:56:18] 2.13.3.0 7345 25248 177536 155002 1 60 33497090 40960001 19489 16776704 0 42932950 99.780 22926378 43778 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 22:56:18] CVMFS is ok
[2026-01-10 22:56:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 22:56:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 22:56:18] Further information can be found at the LHC@home message board.
[2026-01-10 22:56:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 22:56:18] Checking for apptainer binary...
[2026-01-10 22:56:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 22:56:18] Running /usr/bin/apptainer --version
[2026-01-10 22:56:18] apptainer version 1.4.5-2.el9
[2026-01-10 22:56:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 22:56:18] c-212-14.aglt2.org
[2026-01-10 22:56:18] apptainer works
[2026-01-10 22:56:18] Set ATHENA_PROC_NUMBER=9
[2026-01-10 22:56:18] Set ATHENA_CORE_NUMBER=9
[2026-01-10 22:56:18] Starting ATLAS job with PandaID=6965941545
[2026-01-10 22:56:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 00:42:02]  *** The last 200 lines of the pilot log: ***
[2026-01-11 00:42:02] 2026-01-11 05:41:25,196 | INFO     | job 6965941545 has finished - writing final server update
[2026-01-11 00:42:02] 2026-01-11 05:41:25,196 | INFO     | total number of processed events: 400 (read)
[2026-01-11 00:42:02] 2026-01-11 05:41:25,197 | INFO     | executing command: lscpu
[2026-01-11 00:42:02] 2026-01-11 05:41:25,255 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 00:42:02] 2026-01-11 05:41:26,931 | INFO     | monitor loop #460: job 0:6965941545 is in state 'finished'
[2026-01-11 00:42:02] 2026-01-11 05:41:26,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 00:42:02] 2026-01-11 05:41:26,979 | INFO     | time since job start (6300s) is within the limit (349056.0s)
[2026-01-11 00:42:02] 2026-01-11 05:41:28,793 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 00:42:02] 2026-01-11 05:41:28,800 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3192.0915312500015
[2026-01-11 00:42:02] 2026-01-11 05:41:28,814 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965941545/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 00:42:02] 2026-01-11 05:41:28,815 | INFO     | extracted standard info from prmon json
[2026-01-11 00:42:02] 2026-01-11 05:41:28,815 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 00:42:02] 2026-01-11 05:41:28,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 00:42:02] 2026-01-11 05:41:28,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 00:42:02] 2026-01-11 05:41:28,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 00:42:02] 2026-01-11 05:41:28,817 | INFO     | fitting pss+swap vs Time
[2026-01-11 00:42:02] 2026-01-11 05:41:28,817 | INFO     | sum of square deviations: 338804492.0
[2026-01-11 00:42:02] 2026-01-11 05:41:28,818 | INFO     | sum of deviations: 3717292053.9999986
[2026-01-11 00:42:02] 2026-01-11 05:41:28,818 | INFO     | mean x: 1768106920.0
[2026-01-11 00:42:02] 2026-01-11 05:41:28,818 | INFO     | mean y: 2647444.8932038834
[2026-01-11 00:42:02] 2026-01-11 05:41:28,818 | INFO     | intersect: -19396652031.74541
[2026-01-11 00:42:02] 2026-01-11 05:41:28,818 | INFO     | chi2: 1.5109303490839885
[2026-01-11 00:42:02] 2026-01-11 05:41:28,818 | INFO     | sum of square deviations: 291817564.5
[2026-01-11 00:42:02] 2026-01-11 05:41:28,819 | INFO     | sum of deviations: 3560368212.0000014
[2026-01-11 00:42:02] 2026-01-11 05:41:28,819 | INFO     | mean x: 1768106767.5
[2026-01-11 00:42:02] 2026-01-11 05:41:28,819 | INFO     | mean y: 2646935.2653061226
[2026-01-11 00:42:02] 2026-01-11 05:41:28,819 | INFO     | intersect: -21569430609.87875
[2026-01-11 00:42:02] 2026-01-11 05:41:28,819 | INFO     | chi2: 1.5131055711314434
[2026-01-11 00:42:02] 2026-01-11 05:41:28,819 | INFO     | current chi2=1.5131055711314434 (change=-0.1439657393058289 %)
[2026-01-11 00:42:02] 2026-01-11 05:41:28,819 | INFO     | right removable region: 97
[2026-01-11 00:42:02] 2026-01-11 05:41:28,820 | INFO     | sum of square deviations: 291817564.5
[2026-01-11 00:42:02] 2026-01-11 05:41:28,820 | INFO     | sum of deviations: -10541163224.5
[2026-01-11 00:42:02] 2026-01-11 05:41:28,820 | INFO     | mean x: 1768107072.5
[2026-01-11 00:42:02] 2026-01-11 05:41:28,820 | INFO     | mean y: 2692492.9285714286
[2026-01-11 00:42:02] 2026-01-11 05:41:28,820 | INFO     | intersect: 63871038737.09495
[2026-01-11 00:42:02] 2026-01-11 05:41:28,820 | INFO     | chi2: 0.13498369134848467
[2026-01-11 00:42:02] 2026-01-11 05:41:28,821 | INFO     | current chi2=0.13498369134848467 (change=91.06618703963954 %)
[2026-01-11 00:42:02] 2026-01-11 05:41:28,821 | INFO     | sum of square deviations: 249388862.0
[2026-01-11 00:42:02] 2026-01-11 05:41:28,821 | INFO     | sum of deviations: -6397051395.0
[2026-01-11 00:42:02] 2026-01-11 05:41:28,821 | INFO     | mean x: 1768107225.0
[2026-01-11 00:42:02] 2026-01-11 05:41:28,821 | INFO     | mean y: 2677547.8279569894
[2026-01-11 00:42:02] 2026-01-11 05:41:28,821 | INFO     | intersect: 45356237845.143196
[2026-01-11 00:42:02] 2026-01-11 05:41:28,821 | INFO     | chi2: 0.11180039963112345
[2026-01-11 00:42:02] 2026-01-11 05:41:28,822 | INFO     | current chi2=0.11180039963112345 (change=17.17488348833889 %)
[2026-01-11 00:42:02] 2026-01-11 05:41:28,822 | INFO     | left removable region: 20
[2026-01-11 00:42:02] 2026-01-11 05:41:28,822 | INFO     | sum of square deviations: 141539398.0
[2026-01-11 00:42:02] 2026-01-11 05:41:28,822 | INFO     | sum of deviations: 486678069.0
[2026-01-11 00:42:02] 2026-01-11 05:41:28,822 | INFO     | mean x: 1768107347.0
[2026-01-11 00:42:02] 2026-01-11 05:41:28,822 | INFO     | mean y: 2648144.324675325
[2026-01-11 00:42:02] 2026-01-11 05:41:28,822 | INFO     | intersect: -6076924621.857875
[2026-01-11 00:42:02] 2026-01-11 05:41:28,823 | INFO     | chi2: 0.00043424109699249426
[2026-01-11 00:42:02] 2026-01-11 05:41:28,823 | INFO     | current memory leak: 3.44 B/s (using 77 data points, chi2=0.00)
[2026-01-11 00:42:02] 2026-01-11 05:41:28,823 | INFO     | could have reported an average CPU frequency of 3204 MHz (7 samples)
[2026-01-11 00:42:02] 2026-01-11 05:41:28,823 | INFO     | ..............................
[2026-01-11 00:42:02] 2026-01-11 05:41:28,823 | INFO     | . Timing measurements:
[2026-01-11 00:42:02] 2026-01-11 05:41:28,823 | INFO     | . get job = 0 s
[2026-01-11 00:42:02] 2026-01-11 05:41:28,823 | INFO     | . initial setup = 2 s
[2026-01-11 00:42:02] 2026-01-11 05:41:28,823 | INFO     | . payload setup = 4 s
[2026-01-11 00:42:02] 2026-01-11 05:41:28,823 | INFO     | . stage-in = 0 s
[2026-01-11 00:42:02] 2026-01-11 05:41:28,824 | INFO     | . payload execution = 6271 s
[2026-01-11 00:42:02] 2026-01-11 05:41:28,824 | INFO     | . stage-out = 0 s
[2026-01-11 00:42:02] 2026-01-11 05:41:28,824 | INFO     | . log creation = 0 s
[2026-01-11 00:42:02] 2026-01-11 05:41:28,824 | INFO     | ..............................
[2026-01-11 00:42:02] 2026-01-11 05:41:28,984 | INFO     | time since job start (6302s) is within the limit (349056.0s)
[2026-01-11 00:42:02] 2026-01-11 05:41:28,987 | INFO     | 
[2026-01-11 00:42:02] 2026-01-11 05:41:28,988 | INFO     | job summary report
[2026-01-11 00:42:02] 2026-01-11 05:41:28,988 | INFO     | --------------------------------------------------
[2026-01-11 00:42:02] 2026-01-11 05:41:28,988 | INFO     | PanDA job id: 6965941545
[2026-01-11 00:42:02] 2026-01-11 05:41:28,988 | INFO     | task id: 48039250
[2026-01-11 00:42:02] 2026-01-11 05:41:28,988 | INFO     | errors: (none)
[2026-01-11 00:42:02] 2026-01-11 05:41:28,988 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 00:42:02] 2026-01-11 05:41:28,988 | INFO     | pilot state: finished 
[2026-01-11 00:42:02] 2026-01-11 05:41:28,988 | INFO     | transexitcode: 0
[2026-01-11 00:42:02] 2026-01-11 05:41:28,988 | INFO     | exeerrorcode: 0
[2026-01-11 00:42:02] 2026-01-11 05:41:28,988 | INFO     | exeerrordiag: 
[2026-01-11 00:42:02] 2026-01-11 05:41:28,988 | INFO     | exitcode: 0
[2026-01-11 00:42:02] 2026-01-11 05:41:28,988 | INFO     | exitmsg: OK
[2026-01-11 00:42:02] 2026-01-11 05:41:28,988 | INFO     | cpuconsumptiontime: 42727 s
[2026-01-11 00:42:02] 2026-01-11 05:41:28,988 | INFO     | nevents: 400
[2026-01-11 00:42:02] 2026-01-11 05:41:28,989 | INFO     | neventsw: 0
[2026-01-11 00:42:02] 2026-01-11 05:41:28,989 | INFO     | pid: 1673112
[2026-01-11 00:42:02] 2026-01-11 05:41:28,989 | INFO     | pgrp: 1673112
[2026-01-11 00:42:02] 2026-01-11 05:41:28,989 | INFO     | corecount: 9
[2026-01-11 00:42:02] 2026-01-11 05:41:28,989 | INFO     | event service: False
[2026-01-11 00:42:02] 2026-01-11 05:41:28,989 | INFO     | sizes: {0: 2284026, 4: 2284288, 11: 2284316, 6279: 2311516, 6281: 2320514, 6283: 2320570, 6288: 2320892}
[2026-01-11 00:42:02] 2026-01-11 05:41:28,989 | INFO     | --------------------------------------------------
[2026-01-11 00:42:02] 2026-01-11 05:41:28,989 | INFO     | 
[2026-01-11 00:42:02] 2026-01-11 05:41:28,989 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 00:42:02] 2026-01-11 05:41:29,006 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 00:42:02] 2026-01-11 05:41:29,007 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 00:42:02] 2026-01-11 05:41:29,007 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 00:42:02] 2026-01-11 05:41:29,007 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 00:42:02] 2026-01-11 05:41:29,007 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 00:42:02] 2026-01-11 05:41:29,007 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 00:42:02] 2026-01-11 05:41:29,007 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 00:42:02] 2026-01-11 05:41:29,007 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 00:42:02] 2026-01-11 05:41:29,007 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 00:42:02] 2026-01-11 05:41:29,007 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 00:42:02] 2026-01-11 05:41:29,007 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 00:42:02] 2026-01-11 05:41:29,007 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 00:42:02] 2026-01-11 05:41:29,007 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 00:42:02] 2026-01-11 05:41:29,008 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 00:42:02] 2026-01-11 05:41:29,008 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 00:42:02] 2026-01-11 05:41:29,008 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 00:42:02] 2026-01-11 05:41:29,008 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 00:42:02] 2026-01-11 05:41:29,008 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 00:42:02] 2026-01-11 05:41:29,008 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 00:42:02] 2026-01-11 05:41:29,008 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 00:42:02] 2026-01-11 05:41:29,008 | INFO     | job 6965941545 has completed (purged errors)
[2026-01-11 00:42:02] 2026-01-11 05:41:29,008 | INFO     | overall cleanup function is called
[2026-01-11 00:42:02] 2026-01-11 05:41:30,017 | INFO     | --- collectZombieJob: --- 10, [1673112]
[2026-01-11 00:42:02] 2026-01-11 05:41:30,023 | INFO     | zombie collector waiting for pid 1673112
[2026-01-11 00:42:02] 2026-01-11 05:41:30,024 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 00:42:02] 2026-01-11 05:41:30,024 | INFO     | collected zombie processes
[2026-01-11 00:42:02] 2026-01-11 05:41:30,024 | INFO     | will attempt to kill all subprocesses of pid=1673112
[2026-01-11 00:42:02] 2026-01-11 05:41:30,321 | INFO     | process IDs to be killed: [1673112] (in reverse order)
[2026-01-11 00:42:02] 2026-01-11 05:41:30,435 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 00:42:02] 2026-01-11 05:41:30,436 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 00:42:02] 2026-01-11 05:41:30,449 | INFO     | did not find any defunct processes belonging to 1673112
[2026-01-11 00:42:02] 2026-01-11 05:41:30,461 | INFO     | did not find any defunct processes belonging to 1673112
[2026-01-11 00:42:02] 2026-01-11 05:41:30,461 | INFO     | ready for new job
[2026-01-11 00:42:02] 2026-01-11 05:41:30,461 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 00:42:02] 2026-01-11 05:41:30,463 | INFO     | ***************************************
[2026-01-11 00:42:02] 2026-01-11 05:41:30,463 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 00:42:02] 2026-01-11 05:41:30,463 | INFO     | ***************************************
[2026-01-11 00:42:02] 2026-01-11 05:41:30,463 | INFO     | 
[2026-01-11 00:42:02] 2026-01-11 05:41:30,468 | INFO     | architecture information:
[2026-01-11 00:42:02] 2026-01-11 05:41:30,468 | INFO     | executing command: cat /etc/os-release
[2026-01-11 00:42:02] 2026-01-11 05:41:30,492 | INFO     | cat /etc/os-release:
[2026-01-11 00:42:02] NAME="CentOS Linux"
[2026-01-11 00:42:02] VERSION="7 (Core)"
[2026-01-11 00:42:02] ID="centos"
[2026-01-11 00:42:02] ID_LIKE="rhel fedora"
[2026-01-11 00:42:02] VERSION_ID="7"
[2026-01-11 00:42:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 00:42:02] ANSI_COLOR="0;31"
[2026-01-11 00:42:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 00:42:02] HOME_URL="https://www.centos.org/"
[2026-01-11 00:42:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 00:42:02] 
[2026-01-11 00:42:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 00:42:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 00:42:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 00:42:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 00:42:02] 
[2026-01-11 00:42:02] 2026-01-11 05:41:30,492 | INFO     | ***************************************
[2026-01-11 00:42:02] 2026-01-11 05:41:30,994 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 00:42:02] 2026-01-11 05:41:31,010 | INFO     | sufficient remaining disk space (128339410944 B)
[2026-01-11 00:42:02] 2026-01-11 05:41:31,010 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 00:42:02] 2026-01-11 05:41:31,010 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 00:42:02] 2026-01-11 05:41:31,010 | INFO     | update_server=False
[2026-01-11 00:42:02] 2026-01-11 05:41:31,010 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 00:42:02] 2026-01-11 05:41:31,010 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 00:42:02] 2026-01-11 05:41:31,011 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 00:42:02] 2026-01-11 05:41:31,011 | INFO     | aborting loop
[2026-01-11 00:42:02] 2026-01-11 05:41:31,858 | INFO     | all data control threads have been joined
[2026-01-11 00:42:02] 2026-01-11 05:41:32,011 | INFO     | [job] retrieve thread has finished
[2026-01-11 00:42:02] 2026-01-11 05:41:32,015 | INFO     | [job] job monitor thread has finished
[2026-01-11 00:42:02] 2026-01-11 05:41:32,025 | INFO     | [payload] validate_post thread has finished
[2026-01-11 00:42:02] 2026-01-11 05:41:32,399 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 00:42:02] 2026-01-11 05:41:32,451 | INFO     | all job control threads have been joined
[2026-01-11 00:42:02] 2026-01-11 05:41:32,461 | INFO     | [data] copytool_in thread has finished
[2026-01-11 00:42:02] 2026-01-11 05:41:32,463 | INFO     | all payload control threads have been joined
[2026-01-11 00:42:02] 2026-01-11 05:41:32,469 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 00:42:02] 2026-01-11 05:41:32,726 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 00:42:02] 2026-01-11 05:41:32,800 | INFO     | [job] validate thread has finished
[2026-01-11 00:42:02] 2026-01-11 05:41:32,809 | INFO     | [payload] failed_post thread has finished
[2026-01-11 00:42:02] 2026-01-11 05:41:32,863 | INFO     | [data] control thread has finished
[2026-01-11 00:42:02] 2026-01-11 05:41:33,114 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 00:42:02] 2026-01-11 05:41:33,458 | INFO     | [job] control thread has finished
[2026-01-11 00:42:02] 2026-01-11 05:41:33,468 | INFO     | [payload] control thread has finished
[2026-01-11 00:42:02] 2026-01-11 05:41:33,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 00:42:02] 2026-01-11 05:41:34,400 | INFO     | [data] copytool_out thread has finished
[2026-01-11 00:42:02] 2026-01-11 05:41:34,918 | INFO     | [job] queue monitor thread has finished
[2026-01-11 00:42:02] 2026-01-11 05:41:35,014 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 00:42:02] 2026-01-11 05:41:36,340 | INFO     | [monitor] cgroup control has ended
[2026-01-11 00:42:02] 2026-01-11 05:41:41,125 | INFO     | job.realtimelogging is not enabled
[2026-01-11 00:42:02] 2026-01-11 05:41:42,129 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 00:42:02] 2026-01-11 05:41:42,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139908135622464)>', '<ExcThread(monitor, started 139907594962688)>']
[2026-01-11 00:42:02] 2026-01-11 05:41:47,628 | INFO     | all workflow threads have been joined
[2026-01-11 00:42:02] 2026-01-11 05:41:47,629 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 00:42:02] 2026-01-11 05:41:47,629 | INFO     | traces error code: 0
[2026-01-11 00:42:02] 2026-01-11 05:41:47,629 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 00:42:02] 2026-01-11 05:42:02,402 | INFO     | PID=1666744 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 00:42:02] 2026-01-11 05:42:02,402 | INFO     | .. there are 13 such processes running
[2026-01-11 00:42:02] 2026-01-11 05:42:02,403 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 00:42:02] 2026-01-11 05:42:02,403 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 00:42:02] 2026-01-11 05:42:02,403 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 00:42:02] 2026-01-11 05:42:02,403 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 00:42:02] 2026-01-11 05:42:02,403 | INFO     | [monitor] control thread has ended
[2026-01-11 00:42:02] 2026-01-11 05:42:02,504 [wrapper] ==== pilot stdout END ====
[2026-01-11 00:42:02] 2026-01-11 05:42:02,507 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 00:42:02] 2026-01-11 05:42:02,509 [wrapper] pilotpid: 1666744
[2026-01-11 00:42:02] 2026-01-11 05:42:02,512 [wrapper] Pilot exit status: 0
[2026-01-11 00:42:02] 2026-01-11 05:42:02,523 [wrapper] pandaids: 6965941545
[2026-01-11 00:42:02] 2026-01-11 05:42:02,598 [wrapper] cleanup supervisor_pilot 1855297 1666745
[2026-01-11 00:42:02] 2026-01-11 05:42:02,601 [wrapper] Test setup, not cleaning
[2026-01-11 00:42:02] 2026-01-11 05:42:02,603 [wrapper] apfmon messages muted
[2026-01-11 00:42:02] 2026-01-11 05:42:02,606 [wrapper] ==== wrapper stdout END ====
[2026-01-11 00:42:02] 2026-01-11 05:42:02,608 [wrapper] ==== wrapper stderr END ====
[2026-01-11 00:42:02]  *** Error codes and diagnostics ***
[2026-01-11 00:42:02]     "exeErrorCode": 0,
[2026-01-11 00:42:02]     "exeErrorDiag": "",
[2026-01-11 00:42:02]     "pilotErrorCode": 0,
[2026-01-11 00:42:02]     "pilotErrorDiag": "",
[2026-01-11 00:42:02]  *** Listing of results directory ***
[2026-01-11 00:42:02] total 1159460
[2026-01-11 00:42:02] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-11 00:42:02] -rwx------. 1 boincer umatlas     36322 Jan 10 22:34 runpilot2-wrapper.sh
[2026-01-11 00:42:02] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 22:35 queuedata.json
[2026-01-11 00:42:02] -rw-r--r--. 1 boincer umatlas       100 Jan 10 22:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 00:42:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 22:56 run_atlas
[2026-01-11 00:42:02] -rw-r--r--. 1 boincer umatlas       105 Jan 10 22:56 job.xml
[2026-01-11 00:42:02] -rw-r--r--. 2 boincer umatlas 927129514 Jan 10 22:56 EVNT.48039248._000052.pool.root.1
[2026-01-11 00:42:02] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:56 start_atlas.sh
[2026-01-11 00:42:02] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 22:56 shared
[2026-01-11 00:42:02] -rw-r--r--. 2 boincer umatlas    592424 Jan 10 22:56 input.tar.gz
[2026-01-11 00:42:02] -rw-r--r--. 1 boincer umatlas         0 Jan 10 22:56 boinc_lockfile
[2026-01-11 00:42:02] -rw-r--r--. 1 boincer umatlas      2592 Jan 10 22:56 pandaJob.out
[2026-01-11 00:42:02] -rw-------. 1 boincer umatlas        57 Jan 10 22:56 setup.sh.local
[2026-01-11 00:42:02] -rw-------. 1 boincer umatlas    989548 Jan 10 22:56 agis_schedconf.cvmfs.json
[2026-01-11 00:42:02] -rw-------. 1 boincer umatlas   1516240 Jan 10 22:56 agis_ddmendpoints.agis.ALL.json
[2026-01-11 00:42:02] drwx------. 5 boincer umatlas      4096 Jan 10 22:56 pilot3
[2026-01-11 00:42:02] -rw-r--r--. 1 boincer umatlas      6956 Jan 11 00:39 init_data.xml
[2026-01-11 00:42:02] -rw-------. 1 boincer umatlas 253675133 Jan 11 00:40 HITS.48039250._007013.pool.root.1
[2026-01-11 00:42:02] -rw-r--r--. 1 boincer umatlas       531 Jan 11 00:40 boinc_task_state.xml
[2026-01-11 00:42:02] -rw-------. 1 boincer umatlas      1050 Jan 11 00:41 memory_monitor_summary.json
[2026-01-11 00:42:02] -rw-------. 1 boincer umatlas    377634 Jan 11 00:41 log.48039250._007013.job.log.tgz.1
[2026-01-11 00:42:02] -rw-------. 1 boincer umatlas      7808 Jan 11 00:41 heartbeat.json
[2026-01-11 00:42:02] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 00:41 boinc_mmap_file
[2026-01-11 00:42:02] -rw-r--r--. 1 boincer umatlas        27 Jan 11 00:41 wrapper_checkpoint.txt
[2026-01-11 00:42:02] -rw-------. 1 boincer umatlas       823 Jan 11 00:42 pilotlog.txt
[2026-01-11 00:42:02] -rw-------. 1 boincer umatlas        95 Jan 11 00:42 pilot_heartbeat.json
[2026-01-11 00:42:02] -rw-------. 1 boincer umatlas    907918 Jan 11 00:42 log.48039250._007013.job.log.1
[2026-01-11 00:42:02] -rw-------. 1 boincer umatlas       357 Jan 11 00:42 output.list
[2026-01-11 00:42:02] -rw-r--r--. 1 boincer umatlas       620 Jan 11 00:42 runtime_log
[2026-01-11 00:42:02] -rw-------. 1 boincer umatlas   1300480 Jan 11 00:42 result.tar.gz
[2026-01-11 00:42:02] -rw-r--r--. 1 boincer umatlas      9342 Jan 11 00:42 runtime_log.err
[2026-01-11 00:42:02] -rw-------. 1 boincer umatlas       658 Jan 11 00:42 7iiMDmoO1y8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGihKDmv16nHo.diag
[2026-01-11 00:42:02] -rw-r--r--. 1 boincer umatlas     21310 Jan 11 00:42 stderr.txt
[2026-01-11 00:42:02] HITS file was successfully produced:
[2026-01-11 00:42:02] -rw-------. 1 boincer umatlas 253675133 Jan 11 00:40 shared/HITS.pool.root.1
[2026-01-11 00:42:02]  *** Contents of shared directory: ***
[2026-01-11 00:42:02] total 1155008
[2026-01-11 00:42:02] -rw-r--r--. 2 boincer umatlas 927129514 Jan 10 22:56 ATLAS.root_0
[2026-01-11 00:42:02] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:56 start_atlas.sh
[2026-01-11 00:42:02] -rw-r--r--. 2 boincer umatlas    592424 Jan 10 22:56 input.tar.gz
[2026-01-11 00:42:02] -rw-------. 1 boincer umatlas 253675133 Jan 11 00:40 HITS.pool.root.1
[2026-01-11 00:42:02] -rw-------. 1 boincer umatlas   1300480 Jan 11 00:42 result.tar.gz
00:42:24 (1663032): run_atlas exited; CPU time 42811.063932
00:42:24 (1663032): called boinc_finish(0)

</stderr_txt>
]]>

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