Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:39:10 (901559): wrapper (7.7.26015): starting
22:39:10 (901559): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 22:39:10] Arguments: --nthreads 9
[2026-01-10 22:39:10] Threads: 9
[2026-01-10 22:39:10] Checking for CVMFS
[2026-01-10 22:39:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 22:39:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 22:39:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 22:39:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 22:39:11] 2.13.3.0 6968 25228 222852 155002 0 194 22844474 40960001 23615 16776704 0 87147455 99.594 92713633 34633 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 22:39:11] CVMFS is ok
[2026-01-10 22:39:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 22:39:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 22:39:11] Further information can be found at the LHC@home message board.
[2026-01-10 22:39:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 22:39:11] Checking for apptainer binary...
[2026-01-10 22:39:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 22:39:11] Running /usr/bin/apptainer --version
[2026-01-10 22:39:11] apptainer version 1.4.5-2.el9
[2026-01-10 22:39:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 22:39:11] c-212-5.aglt2.org
[2026-01-10 22:39:11] apptainer works
[2026-01-10 22:39:11] Set ATHENA_PROC_NUMBER=9
[2026-01-10 22:39:11] Set ATHENA_CORE_NUMBER=9
[2026-01-10 22:39:12] Starting ATLAS job with PandaID=6965941629
[2026-01-10 22:39:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 02:47:07]  *** The last 200 lines of the pilot log: ***
[2026-01-11 02:47:07] 2026-01-11 07:46:08,535 | INFO     | time since job start (14793s) is within the limit (349056.0s)
[2026-01-11 02:47:07] 2026-01-11 07:46:08,927 | INFO     | monitor loop #911: job 0:6965941629 is in state 'finished'
[2026-01-11 02:47:07] 2026-01-11 07:46:08,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 02:47:07] 2026-01-11 07:46:10,542 | INFO     | time since job start (14795s) is within the limit (349056.0s)
[2026-01-11 02:47:07] 2026-01-11 07:46:11,432 | INFO     | monitor loop #912: job 0:6965941629 is in state 'finished'
[2026-01-11 02:47:07] 2026-01-11 07:46:11,432 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 02:47:07] 2026-01-11 07:46:12,548 | INFO     | time since job start (14797s) is within the limit (349056.0s)
[2026-01-11 02:47:07] 2026-01-11 07:46:13,936 | INFO     | monitor loop #913: job 0:6965941629 is in state 'finished'
[2026-01-11 02:47:07] 2026-01-11 07:46:13,937 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 02:47:07] 2026-01-11 07:46:13,989 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 02:47:07] 2026-01-11 07:46:13,994 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3222.0531354166656
[2026-01-11 02:47:07] 2026-01-11 07:46:14,007 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965941629/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 02:47:07] 2026-01-11 07:46:14,007 | INFO     | extracted standard info from prmon json
[2026-01-11 02:47:07] 2026-01-11 07:46:14,008 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 02:47:07] 2026-01-11 07:46:14,008 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 02:47:07] 2026-01-11 07:46:14,008 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 02:47:07] 2026-01-11 07:46:14,008 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 02:47:07] 2026-01-11 07:46:14,011 | INFO     | fitting pss+swap vs Time
[2026-01-11 02:47:07] 2026-01-11 07:46:14,012 | INFO     | sum of square deviations: 4394509583.6901
[2026-01-11 02:47:07] 2026-01-11 07:46:14,013 | INFO     | sum of deviations: 48272607993.603294
[2026-01-11 02:47:07] 2026-01-11 07:46:14,013 | INFO     | mean x: 1768110162.5578513
[2026-01-11 02:47:07] 2026-01-11 07:46:14,013 | INFO     | mean y: 2601349.3140495867
[2026-01-11 02:47:07] 2026-01-11 07:46:14,013 | INFO     | intersect: -19419654340.703426
[2026-01-11 02:47:07] 2026-01-11 07:46:14,013 | INFO     | chi2: 1.2798979403927218
[2026-01-11 02:47:07] 2026-01-11 07:46:14,014 | INFO     | sum of square deviations: 4127708851.173
[2026-01-11 02:47:07] 2026-01-11 07:46:14,015 | INFO     | sum of deviations: 46751365629.48945
[2026-01-11 02:47:07] 2026-01-11 07:46:14,015 | INFO     | mean x: 1768110010.0590718
[2026-01-11 02:47:07] 2026-01-11 07:46:14,015 | INFO     | mean y: 2600479.6793248947
[2026-01-11 02:47:07] 2026-01-11 07:46:14,015 | INFO     | intersect: -20023414080.417717
[2026-01-11 02:47:07] 2026-01-11 07:46:14,015 | INFO     | chi2: 1.2803111924203903
[2026-01-11 02:47:07] 2026-01-11 07:46:14,015 | INFO     | current chi2=1.2803111924203903 (change=-0.03228788910635387 %)
[2026-01-11 02:47:07] 2026-01-11 07:46:14,015 | INFO     | right removable region: 236
[2026-01-11 02:47:07] 2026-01-11 07:46:14,016 | INFO     | sum of square deviations: 4127700311.173
[2026-01-11 02:47:07] 2026-01-11 07:46:14,017 | INFO     | sum of deviations: 12066811164.324902
[2026-01-11 02:47:07] 2026-01-11 07:46:14,017 | INFO     | mean x: 1768110315.0590718
[2026-01-11 02:47:07] 2026-01-11 07:46:14,017 | INFO     | mean y: 2621862.476793249
[2026-01-11 02:47:07] 2026-01-11 07:46:14,017 | INFO     | intersect: -5166225602.481187
[2026-01-11 02:47:07] 2026-01-11 07:46:14,017 | INFO     | chi2: 0.02281956737828196
[2026-01-11 02:47:07] 2026-01-11 07:46:14,017 | INFO     | current chi2=0.02281956737828196 (change=98.21707913903822 %)
[2026-01-11 02:47:07] 2026-01-11 07:46:14,018 | INFO     | sum of square deviations: 3871914501.1551766
[2026-01-11 02:47:07] 2026-01-11 07:46:14,019 | INFO     | sum of deviations: 11014673978.301727
[2026-01-11 02:47:07] 2026-01-11 07:46:14,019 | INFO     | mean x: 1768110467.560345
[2026-01-11 02:47:07] 2026-01-11 07:46:14,019 | INFO     | mean y: 2622477.228448276
[2026-01-11 02:47:07] 2026-01-11 07:46:14,019 | INFO     | intersect: -5027230416.472966
[2026-01-11 02:47:07] 2026-01-11 07:46:14,019 | INFO     | chi2: 0.019983863318934387
[2026-01-11 02:47:07] 2026-01-11 07:46:14,019 | INFO     | current chi2=0.019983863318934387 (change=12.42663374085871 %)
[2026-01-11 02:47:07] 2026-01-11 07:46:14,020 | INFO     | left removable region: 20
[2026-01-11 02:47:07] 2026-01-11 07:46:14,020 | INFO     | sum of square deviations: 3124778937.092595
[2026-01-11 02:47:07] 2026-01-11 07:46:14,021 | INFO     | sum of deviations: 12615382534.972223
[2026-01-11 02:47:07] 2026-01-11 07:46:14,021 | INFO     | mean x: 1768110589.5648148
[2026-01-11 02:47:07] 2026-01-11 07:46:14,021 | INFO     | mean y: 2620299.1805555555
[2026-01-11 02:47:07] 2026-01-11 07:46:14,021 | INFO     | intersect: -7135609924.634615
[2026-01-11 02:47:07] 2026-01-11 07:46:14,021 | INFO     | chi2: 0.014713702982616225
[2026-01-11 02:47:07] 2026-01-11 07:46:14,021 | INFO     | current memory leak: 4.04 B/s (using 216 data points, chi2=0.01)
[2026-01-11 02:47:07] 2026-01-11 07:46:14,022 | INFO     | could have reported an average CPU frequency of 3140 MHz (12 samples)
[2026-01-11 02:47:07] 2026-01-11 07:46:14,022 | INFO     | ..............................
[2026-01-11 02:47:07] 2026-01-11 07:46:14,022 | INFO     | . Timing measurements:
[2026-01-11 02:47:07] 2026-01-11 07:46:14,022 | INFO     | . get job = 0 s
[2026-01-11 02:47:07] 2026-01-11 07:46:14,022 | INFO     | . initial setup = 3 s
[2026-01-11 02:47:07] 2026-01-11 07:46:14,022 | INFO     | . payload setup = 9 s
[2026-01-11 02:47:07] 2026-01-11 07:46:14,022 | INFO     | . stage-in = 0 s
[2026-01-11 02:47:07] 2026-01-11 07:46:14,022 | INFO     | . payload execution = 14751 s
[2026-01-11 02:47:07] 2026-01-11 07:46:14,022 | INFO     | . stage-out = 3 s
[2026-01-11 02:47:07] 2026-01-11 07:46:14,023 | INFO     | . log creation = 0 s
[2026-01-11 02:47:07] 2026-01-11 07:46:14,023 | INFO     | ..............................
[2026-01-11 02:47:07] 2026-01-11 07:46:14,095 | INFO     | 
[2026-01-11 02:47:07] 2026-01-11 07:46:14,096 | INFO     | job summary report
[2026-01-11 02:47:07] 2026-01-11 07:46:14,096 | INFO     | --------------------------------------------------
[2026-01-11 02:47:07] 2026-01-11 07:46:14,096 | INFO     | PanDA job id: 6965941629
[2026-01-11 02:47:07] 2026-01-11 07:46:14,096 | INFO     | task id: 48039250
[2026-01-11 02:47:07] 2026-01-11 07:46:14,096 | INFO     | errors: (none)
[2026-01-11 02:47:07] 2026-01-11 07:46:14,096 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 02:47:07] 2026-01-11 07:46:14,096 | INFO     | pilot state: finished 
[2026-01-11 02:47:07] 2026-01-11 07:46:14,096 | INFO     | transexitcode: 0
[2026-01-11 02:47:07] 2026-01-11 07:46:14,096 | INFO     | exeerrorcode: 0
[2026-01-11 02:47:07] 2026-01-11 07:46:14,096 | INFO     | exeerrordiag: 
[2026-01-11 02:47:07] 2026-01-11 07:46:14,096 | INFO     | exitcode: 0
[2026-01-11 02:47:07] 2026-01-11 07:46:14,096 | INFO     | exitmsg: OK
[2026-01-11 02:47:07] 2026-01-11 07:46:14,096 | INFO     | cpuconsumptiontime: 43778 s
[2026-01-11 02:47:07] 2026-01-11 07:46:14,096 | INFO     | nevents: 400
[2026-01-11 02:47:07] 2026-01-11 07:46:14,097 | INFO     | neventsw: 0
[2026-01-11 02:47:07] 2026-01-11 07:46:14,097 | INFO     | pid: 938635
[2026-01-11 02:47:07] 2026-01-11 07:46:14,097 | INFO     | pgrp: 938635
[2026-01-11 02:47:07] 2026-01-11 07:46:14,097 | INFO     | corecount: 9
[2026-01-11 02:47:07] 2026-01-11 07:46:14,097 | INFO     | event service: False
[2026-01-11 02:47:07] 2026-01-11 07:46:14,097 | INFO     | sizes: {0: 2284028, 10: 2284290, 11: 2284318, 14765: 2315253, 14769: 2324251, 14771: 2324307, 14779: 2324629}
[2026-01-11 02:47:07] 2026-01-11 07:46:14,097 | INFO     | --------------------------------------------------
[2026-01-11 02:47:07] 2026-01-11 07:46:14,097 | INFO     | 
[2026-01-11 02:47:07] 2026-01-11 07:46:14,097 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-11 02:47:07] 2026-01-11 07:46:14,125 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 02:47:07] 2026-01-11 07:46:14,125 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 02:47:07] 2026-01-11 07:46:14,125 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 02:47:07] 2026-01-11 07:46:14,125 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 02:47:07] 2026-01-11 07:46:14,126 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 02:47:07] 2026-01-11 07:46:14,126 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 02:47:07] 2026-01-11 07:46:14,126 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 02:47:07] 2026-01-11 07:46:14,126 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 02:47:07] 2026-01-11 07:46:14,126 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 02:47:07] 2026-01-11 07:46:14,126 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 02:47:07] 2026-01-11 07:46:14,126 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 02:47:07] 2026-01-11 07:46:14,126 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 02:47:07] 2026-01-11 07:46:14,126 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 02:47:07] 2026-01-11 07:46:14,126 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 02:47:07] 2026-01-11 07:46:14,126 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 02:47:07] 2026-01-11 07:46:14,126 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 02:47:07] 2026-01-11 07:46:14,126 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 02:47:07] 2026-01-11 07:46:14,127 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 02:47:07] 2026-01-11 07:46:14,127 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 02:47:07] 2026-01-11 07:46:14,127 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 02:47:07] 2026-01-11 07:46:14,127 | INFO     | job 6965941629 has completed (purged errors)
[2026-01-11 02:47:07] 2026-01-11 07:46:14,127 | INFO     | overall cleanup function is called
[2026-01-11 02:47:07] 2026-01-11 07:46:15,136 | INFO     | --- collectZombieJob: --- 10, [938635]
[2026-01-11 02:47:07] 2026-01-11 07:46:15,137 | INFO     | zombie collector waiting for pid 938635
[2026-01-11 02:47:07] 2026-01-11 07:46:15,137 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 02:47:07] 2026-01-11 07:46:15,137 | INFO     | collected zombie processes
[2026-01-11 02:47:07] 2026-01-11 07:46:15,137 | INFO     | will attempt to kill all subprocesses of pid=938635
[2026-01-11 02:47:07] 2026-01-11 07:46:15,660 | INFO     | process IDs to be killed: [938635] (in reverse order)
[2026-01-11 02:47:07] 2026-01-11 07:46:15,815 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 02:47:07] 2026-01-11 07:46:15,816 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 02:47:07] 2026-01-11 07:46:15,834 | INFO     | did not find any defunct processes belonging to 938635
[2026-01-11 02:47:07] 2026-01-11 07:46:15,887 | INFO     | did not find any defunct processes belonging to 938635
[2026-01-11 02:47:07] 2026-01-11 07:46:15,888 | INFO     | ready for new job
[2026-01-11 02:47:07] 2026-01-11 07:46:15,888 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 02:47:07] 2026-01-11 07:46:15,890 | INFO     | ***************************************
[2026-01-11 02:47:07] 2026-01-11 07:46:15,890 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 02:47:07] 2026-01-11 07:46:15,890 | INFO     | ***************************************
[2026-01-11 02:47:07] 2026-01-11 07:46:15,890 | INFO     | 
[2026-01-11 02:47:07] 2026-01-11 07:46:15,900 | INFO     | architecture information:
[2026-01-11 02:47:07] 2026-01-11 07:46:15,904 | INFO     | executing command: cat /etc/os-release
[2026-01-11 02:47:07] 2026-01-11 07:46:16,006 | INFO     | cat /etc/os-release:
[2026-01-11 02:47:07] NAME="CentOS Linux"
[2026-01-11 02:47:07] VERSION="7 (Core)"
[2026-01-11 02:47:07] ID="centos"
[2026-01-11 02:47:07] ID_LIKE="rhel fedora"
[2026-01-11 02:47:07] VERSION_ID="7"
[2026-01-11 02:47:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 02:47:07] ANSI_COLOR="0;31"
[2026-01-11 02:47:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 02:47:07] HOME_URL="https://www.centos.org/"
[2026-01-11 02:47:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 02:47:07] 
[2026-01-11 02:47:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 02:47:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 02:47:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 02:47:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 02:47:07] 
[2026-01-11 02:47:07] 2026-01-11 07:46:16,006 | INFO     | ***************************************
[2026-01-11 02:47:07] 2026-01-11 07:46:16,509 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-11 02:47:07] 2026-01-11 07:46:16,534 | INFO     | sufficient remaining disk space (126299930624 B)
[2026-01-11 02:47:07] 2026-01-11 07:46:16,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 02:47:07] 2026-01-11 07:46:16,535 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 02:47:07] 2026-01-11 07:46:16,535 | INFO     | update_server=False
[2026-01-11 02:47:07] 2026-01-11 07:46:16,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 02:47:07] 2026-01-11 07:46:16,535 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 02:47:07] 2026-01-11 07:46:16,795 | INFO     | all payload control threads have been joined
[2026-01-11 02:47:07] 2026-01-11 07:46:16,807 | INFO     | all data control threads have been joined
[2026-01-11 02:47:07] 2026-01-11 07:46:16,994 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 02:47:07] 2026-01-11 07:46:17,213 | INFO     | all job control threads have been joined
[2026-01-11 02:47:07] 2026-01-11 07:46:17,447 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 02:47:07] 2026-01-11 07:46:17,448 | INFO     | aborting loop
[2026-01-11 02:47:07] 2026-01-11 07:46:17,541 | INFO     | [job] retrieve thread has finished
[2026-01-11 02:47:07] 2026-01-11 07:46:17,615 | INFO     | [job] validate thread has finished
[2026-01-11 02:47:07] 2026-01-11 07:46:17,796 | INFO     | [payload] control thread has finished
[2026-01-11 02:47:07] 2026-01-11 07:46:17,796 | INFO     | [payload] failed_post thread has finished
[2026-01-11 02:47:07] 2026-01-11 07:46:17,812 | INFO     | [data] control thread has finished
[2026-01-11 02:47:07] 2026-01-11 07:46:18,014 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 02:47:07] 2026-01-11 07:46:18,047 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 02:47:07] 2026-01-11 07:46:18,218 | INFO     | [job] control thread has finished
[2026-01-11 02:47:07] 2026-01-11 07:46:18,431 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 02:47:07] 2026-01-11 07:46:18,453 | INFO     | [job] job monitor thread has finished
[2026-01-11 02:47:07] 2026-01-11 07:46:18,532 | INFO     | [payload] validate_post thread has finished
[2026-01-11 02:47:07] 2026-01-11 07:46:18,595 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 02:47:07] 2026-01-11 07:46:19,001 | INFO     | [data] copytool_out thread has finished
[2026-01-11 02:47:07] 2026-01-11 07:46:19,014 | INFO     | [data] copytool_in thread has finished
[2026-01-11 02:47:07] 2026-01-11 07:46:19,121 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 02:47:07] 2026-01-11 07:46:20,126 | INFO     | [job] queue monitor thread has finished
[2026-01-11 02:47:07] 2026-01-11 07:46:20,543 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 02:47:07] 2026-01-11 07:46:46,173 | INFO     | PID=912728 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 02:47:07] 2026-01-11 07:46:46,173 | INFO     | .. there are 21 such processes running
[2026-01-11 02:47:07] 2026-01-11 07:46:46,173 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 02:47:07] 2026-01-11 07:46:46,173 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 02:47:07] 2026-01-11 07:46:46,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 02:47:07] 2026-01-11 07:47:00,638 | INFO     | [monitor] cgroup control has ended
[2026-01-11 02:47:07] 2026-01-11 07:47:02,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139881382438720)>', '<ExcThread(monitor, started 139881003067136)>']
[2026-01-11 02:47:07] 2026-01-11 07:47:02,266 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 02:47:07] 2026-01-11 07:47:02,267 | INFO     | [monitor] control thread has ended
[2026-01-11 02:47:07] 2026-01-11 07:47:07,092 | INFO     | all workflow threads have been joined
[2026-01-11 02:47:07] 2026-01-11 07:47:07,092 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 02:47:07] 2026-01-11 07:47:07,093 | INFO     | traces error code: 0
[2026-01-11 02:47:07] 2026-01-11 07:47:07,094 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 02:47:07] 2026-01-11 07:47:07,227 [wrapper] ==== pilot stdout END ====
[2026-01-11 02:47:07] 2026-01-11 07:47:07,233 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 02:47:07] 2026-01-11 07:47:07,237 [wrapper] pilotpid: 912728
[2026-01-11 02:47:07] 2026-01-11 07:47:07,240 [wrapper] Pilot exit status: 0
[2026-01-11 02:47:07] 2026-01-11 07:47:07,255 [wrapper] pandaids: 6965941629
[2026-01-11 02:47:07] 2026-01-11 07:47:07,379 [wrapper] cleanup supervisor_pilot 1610785 912729
[2026-01-11 02:47:07] 2026-01-11 07:47:07,383 [wrapper] Test setup, not cleaning
[2026-01-11 02:47:07] 2026-01-11 07:47:07,418 [wrapper] apfmon messages muted
[2026-01-11 02:47:07] 2026-01-11 07:47:07,423 [wrapper] ==== wrapper stdout END ====
[2026-01-11 02:47:07] 2026-01-11 07:47:07,426 [wrapper] ==== wrapper stderr END ====
[2026-01-11 02:47:07]  *** Error codes and diagnostics ***
[2026-01-11 02:47:07]     "exeErrorCode": 0,
[2026-01-11 02:47:07]     "exeErrorDiag": "",
[2026-01-11 02:47:07]     "pilotErrorCode": 0,
[2026-01-11 02:47:07]     "pilotErrorDiag": "",
[2026-01-11 02:47:07]  *** Listing of results directory ***
[2026-01-11 02:47:07] total 1166860
[2026-01-11 02:47:07] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-11 02:47:07] -rwx------. 1 boincer umatlas     36322 Jan 10 22:34 runpilot2-wrapper.sh
[2026-01-11 02:47:07] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 22:35 queuedata.json
[2026-01-11 02:47:07] -rw-r--r--. 1 boincer umatlas       100 Jan 10 22:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 02:47:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 22:39 run_atlas
[2026-01-11 02:47:07] -rw-r--r--. 1 boincer umatlas       105 Jan 10 22:39 job.xml
[2026-01-11 02:47:07] -rw-r--r--. 2 boincer umatlas 928212843 Jan 10 22:39 EVNT.48039248._000059.pool.root.1
[2026-01-11 02:47:07] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:39 start_atlas.sh
[2026-01-11 02:47:07] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 22:39 shared
[2026-01-11 02:47:07] -rw-r--r--. 2 boincer umatlas    592414 Jan 10 22:39 input.tar.gz
[2026-01-11 02:47:07] -rw-r--r--. 1 boincer umatlas         0 Jan 10 22:39 boinc_lockfile
[2026-01-11 02:47:07] -rw-r--r--. 1 boincer umatlas      2593 Jan 10 22:39 pandaJob.out
[2026-01-11 02:47:07] -rw-------. 1 boincer umatlas        57 Jan 10 22:39 setup.sh.local
[2026-01-11 02:47:07] -rw-------. 1 boincer umatlas    989548 Jan 10 22:39 agis_schedconf.cvmfs.json
[2026-01-11 02:47:07] drwx------. 5 boincer umatlas      4096 Jan 10 22:39 pilot3
[2026-01-11 02:47:07] -rw-------. 1 boincer umatlas 257836952 Jan 11 02:45 HITS.48039250._007097.pool.root.1
[2026-01-11 02:47:07] -rw-r--r--. 1 boincer umatlas       532 Jan 11 02:45 boinc_task_state.xml
[2026-01-11 02:47:07] -rw-r--r--. 1 boincer umatlas      6958 Jan 11 02:45 init_data.xml
[2026-01-11 02:47:07] -rw-------. 1 boincer umatlas      1035 Jan 11 02:45 memory_monitor_summary.json
[2026-01-11 02:47:07] -rw-------. 1 boincer umatlas   1516240 Jan 11 02:46 agis_ddmendpoints.agis.ALL.json
[2026-01-11 02:47:07] -rw-------. 1 boincer umatlas    545054 Jan 11 02:46 log.48039250._007097.job.log.tgz.1
[2026-01-11 02:47:07] -rw-------. 1 boincer umatlas        95 Jan 11 02:46 pilot_heartbeat.json
[2026-01-11 02:47:07] -rw-------. 1 boincer umatlas      7774 Jan 11 02:46 heartbeat.json
[2026-01-11 02:47:07] -rw-r--r--. 1 boincer umatlas        28 Jan 11 02:47 wrapper_checkpoint.txt
[2026-01-11 02:47:07] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 02:47 boinc_mmap_file
[2026-01-11 02:47:07] -rw-------. 1 boincer umatlas      4824 Jan 11 02:47 pilotlog.txt
[2026-01-11 02:47:07] -rw-------. 1 boincer umatlas   1899528 Jan 11 02:47 log.48039250._007097.job.log.1
[2026-01-11 02:47:07] -rw-------. 1 boincer umatlas       357 Jan 11 02:47 output.list
[2026-01-11 02:47:07] -rw-r--r--. 1 boincer umatlas       620 Jan 11 02:47 runtime_log
[2026-01-11 02:47:07] -rw-------. 1 boincer umatlas   2467840 Jan 11 02:47 result.tar.gz
[2026-01-11 02:47:07] -rw-------. 1 boincer umatlas       654 Jan 11 02:47 YV6NDmoO1y8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4ihKDmwiZklm.diag
[2026-01-11 02:47:07] -rw-r--r--. 1 boincer umatlas      9338 Jan 11 02:47 runtime_log.err
[2026-01-11 02:47:07] -rw-r--r--. 1 boincer umatlas     21392 Jan 11 02:47 stderr.txt
[2026-01-11 02:47:07] HITS file was successfully produced:
[2026-01-11 02:47:07] -rw-------. 1 boincer umatlas 257836952 Jan 11 02:45 shared/HITS.pool.root.1
[2026-01-11 02:47:07]  *** Contents of shared directory: ***
[2026-01-11 02:47:07] total 1161272
[2026-01-11 02:47:07] -rw-r--r--. 2 boincer umatlas 928212843 Jan 10 22:39 ATLAS.root_0
[2026-01-11 02:47:07] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:39 start_atlas.sh
[2026-01-11 02:47:07] -rw-r--r--. 2 boincer umatlas    592414 Jan 10 22:39 input.tar.gz
[2026-01-11 02:47:07] -rw-------. 1 boincer umatlas 257836952 Jan 11 02:45 HITS.pool.root.1
[2026-01-11 02:47:07] -rw-------. 1 boincer umatlas   2467840 Jan 11 02:47 result.tar.gz
02:47:09 (901559): run_atlas exited; CPU time 44254.742937
02:47:09 (901559): called boinc_finish(0)

</stderr_txt>
]]>

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