Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:39:09 (12418): wrapper (7.7.26015): starting
22:39:09 (12418): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 22:39:09] Arguments: --nthreads 8
[2026-01-10 22:39:09] Threads: 8
[2026-01-10 22:39:09] Checking for CVMFS
[2026-01-10 22:39:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 22:39:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 22:39:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 22:39:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 22:39:10] 2.11.2.0 3869 169104 130996 155002 2 1 12637093 18432001 1 130560 0 117340179 99.987 6038617 33105 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 22:39:10] CVMFS is ok
[2026-01-10 22:39:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 22:39:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 22:39:10] Further information can be found at the LHC@home message board.
[2026-01-10 22:39:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 22:39:10] Checking for apptainer binary...
[2026-01-10 22:39:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 22:39:10] Running /usr/bin/apptainer --version
[2026-01-10 22:39:10] apptainer version 1.3.2-1.el7
[2026-01-10 22:39:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 22:39:11] c-206-12.aglt2.org
[2026-01-10 22:39:11] apptainer works
[2026-01-10 22:39:11] Set ATHENA_PROC_NUMBER=8
[2026-01-10 22:39:11] Set ATHENA_CORE_NUMBER=8
[2026-01-10 22:39:11] Starting ATLAS job with PandaID=6965941600
[2026-01-10 22:39:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 02:40:56]  *** The last 200 lines of the pilot log: ***
[2026-01-11 02:40:56] 2026-01-11 07:39:46,643 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 02:40:56] 2026-01-11 07:39:47,517 | INFO     | PID=19658 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 02:40:56] 2026-01-11 07:39:47,517 | INFO     | .. there are 3 such processes running
[2026-01-11 02:40:56] 2026-01-11 07:39:48,518 | INFO     | time since job start (14422s) is within the limit (349056.0s)
[2026-01-11 02:40:56] 2026-01-11 07:39:49,204 | WARNING  | process 7818 can no longer be monitored (due to stat problems) - aborting
[2026-01-11 02:40:56] 2026-01-11 07:39:49,204 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965941600/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 02:40:56] 2026-01-11 07:39:49,362 | INFO     | number of running child processes to parent process 7818: 1
[2026-01-11 02:40:56] 2026-01-11 07:39:49,362 | INFO     | maximum number of monitored processes: 6
[2026-01-11 02:40:56] 2026-01-11 07:39:50,526 | INFO     | time since job start (14424s) is within the limit (349056.0s)
[2026-01-11 02:40:56] 2026-01-11 07:39:50,667 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-11 02:40:56] 2026-01-11 07:39:50,674 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2477.8333333333335
[2026-01-11 02:40:56] 2026-01-11 07:39:50,678 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965941600/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 02:40:56] 2026-01-11 07:39:50,679 | INFO     | extracted standard info from prmon json
[2026-01-11 02:40:56] 2026-01-11 07:39:50,679 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 02:40:56] 2026-01-11 07:39:50,679 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 02:40:56] 2026-01-11 07:39:50,680 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 02:40:56] 2026-01-11 07:39:50,680 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 02:40:56] 2026-01-11 07:39:50,687 | INFO     | fitting pss+swap vs Time
[2026-01-11 02:40:56] 2026-01-11 07:39:50,687 | INFO     | sum of square deviations: 4075741535.0
[2026-01-11 02:40:56] 2026-01-11 07:39:50,690 | INFO     | sum of deviations: 34528103432.50003
[2026-01-11 02:40:56] 2026-01-11 07:39:50,690 | INFO     | mean x: 1768109963.5
[2026-01-11 02:40:56] 2026-01-11 07:39:50,690 | INFO     | mean y: 2532316.9618644067
[2026-01-11 02:40:56] 2026-01-11 07:39:50,690 | INFO     | intersect: -14976210367.162205
[2026-01-11 02:40:56] 2026-01-11 07:39:50,691 | INFO     | chi2: 1.410997620754583
[2026-01-11 02:40:56] 2026-01-11 07:39:50,691 | INFO     | sum of square deviations: 3822136780.0
[2026-01-11 02:40:56] 2026-01-11 07:39:50,694 | INFO     | sum of deviations: 33562084466.000008
[2026-01-11 02:40:56] 2026-01-11 07:39:50,694 | INFO     | mean x: 1768109811.0
[2026-01-11 02:40:56] 2026-01-11 07:39:50,694 | INFO     | mean y: 2531735.9826839827
[2026-01-11 02:40:56] 2026-01-11 07:39:50,694 | INFO     | intersect: -15523194902.702734
[2026-01-11 02:40:56] 2026-01-11 07:39:50,695 | INFO     | chi2: 1.4116429674572444
[2026-01-11 02:40:56] 2026-01-11 07:39:50,695 | INFO     | current chi2=1.4116429674572444 (change=-0.045736909344776415 %)
[2026-01-11 02:40:56] 2026-01-11 07:39:50,695 | INFO     | right removable region: 230
[2026-01-11 02:40:56] 2026-01-11 07:39:50,695 | INFO     | sum of square deviations: 3822136780.0
[2026-01-11 02:40:56] 2026-01-11 07:39:50,698 | INFO     | sum of deviations: -2667161376.9999995
[2026-01-11 02:40:56] 2026-01-11 07:39:50,698 | INFO     | mean x: 1768110116.0
[2026-01-11 02:40:56] 2026-01-11 07:39:50,698 | INFO     | mean y: 2554490.341991342
[2026-01-11 02:40:56] 2026-01-11 07:39:50,698 | INFO     | intersect: 1236376115.0296848
[2026-01-11 02:40:56] 2026-01-11 07:39:50,699 | INFO     | chi2: 0.017302271686291008
[2026-01-11 02:40:56] 2026-01-11 07:39:50,699 | INFO     | current chi2=0.017302271686291008 (change=98.77375614020966 %)
[2026-01-11 02:40:56] 2026-01-11 07:39:50,699 | INFO     | sum of square deviations: 3579276412.5
[2026-01-11 02:40:56] 2026-01-11 07:39:50,701 | INFO     | sum of deviations: -2939463943.499999
[2026-01-11 02:40:56] 2026-01-11 07:39:50,702 | INFO     | mean x: 1768110268.5
[2026-01-11 02:40:56] 2026-01-11 07:39:50,702 | INFO     | mean y: 2554656.4380530976
[2026-01-11 02:40:56] 2026-01-11 07:39:50,702 | INFO     | intersect: 1454606910.4179914
[2026-01-11 02:40:56] 2026-01-11 07:39:50,703 | INFO     | chi2: 0.01688544762506094
[2026-01-11 02:40:56] 2026-01-11 07:39:50,703 | INFO     | current chi2=0.01688544762506094 (change=2.409071298772454 %)
[2026-01-11 02:40:56] 2026-01-11 07:39:50,703 | INFO     | left removable region: 20
[2026-01-11 02:40:56] 2026-01-11 07:39:50,703 | INFO     | sum of square deviations: 2871616632.5
[2026-01-11 02:40:56] 2026-01-11 07:39:50,705 | INFO     | sum of deviations: -65352289.000000834
[2026-01-11 02:40:56] 2026-01-11 07:39:50,705 | INFO     | mean x: 1768110390.5
[2026-01-11 02:40:56] 2026-01-11 07:39:50,706 | INFO     | mean y: 2552340.685714286
[2026-01-11 02:40:56] 2026-01-11 07:39:50,706 | INFO     | intersect: 42791020.15152572
[2026-01-11 02:40:56] 2026-01-11 07:39:50,706 | INFO     | chi2: 0.013447233552764901
[2026-01-11 02:40:56] 2026-01-11 07:39:50,707 | INFO     | current memory leak: -0.02 B/s (using 210 data points, chi2=0.01)
[2026-01-11 02:40:56] 2026-01-11 07:39:50,707 | INFO     | could have reported an average CPU frequency of 2406 MHz (11 samples)
[2026-01-11 02:40:56] 2026-01-11 07:39:50,707 | INFO     | ..............................
[2026-01-11 02:40:56] 2026-01-11 07:39:50,708 | INFO     | . Timing measurements:
[2026-01-11 02:40:56] 2026-01-11 07:39:50,708 | INFO     | . get job = 0 s
[2026-01-11 02:40:56] 2026-01-11 07:39:50,708 | INFO     | . initial setup = 2 s
[2026-01-11 02:40:56] 2026-01-11 07:39:50,708 | INFO     | . payload setup = 6 s
[2026-01-11 02:40:56] 2026-01-11 07:39:50,708 | INFO     | . stage-in = 0 s
[2026-01-11 02:40:56] 2026-01-11 07:39:50,708 | INFO     | . payload execution = 14390 s
[2026-01-11 02:40:56] 2026-01-11 07:39:50,709 | INFO     | . stage-out = 2 s
[2026-01-11 02:40:56] 2026-01-11 07:39:50,709 | INFO     | . log creation = 0 s
[2026-01-11 02:40:56] 2026-01-11 07:39:50,709 | INFO     | ..............................
[2026-01-11 02:40:56] 2026-01-11 07:39:50,800 | INFO     | 
[2026-01-11 02:40:56] 2026-01-11 07:39:50,801 | INFO     | job summary report
[2026-01-11 02:40:56] 2026-01-11 07:39:50,801 | INFO     | --------------------------------------------------
[2026-01-11 02:40:56] 2026-01-11 07:39:50,801 | INFO     | PanDA job id: 6965941600
[2026-01-11 02:40:56] 2026-01-11 07:39:50,801 | INFO     | task id: 48039250
[2026-01-11 02:40:56] 2026-01-11 07:39:50,801 | INFO     | errors: (none)
[2026-01-11 02:40:56] 2026-01-11 07:39:50,801 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 02:40:56] 2026-01-11 07:39:50,802 | INFO     | pilot state: finished 
[2026-01-11 02:40:56] 2026-01-11 07:39:50,802 | INFO     | transexitcode: 0
[2026-01-11 02:40:56] 2026-01-11 07:39:50,802 | INFO     | exeerrorcode: 0
[2026-01-11 02:40:56] 2026-01-11 07:39:50,802 | INFO     | exeerrordiag: 
[2026-01-11 02:40:56] 2026-01-11 07:39:50,802 | INFO     | exitcode: 0
[2026-01-11 02:40:56] 2026-01-11 07:39:50,802 | INFO     | exitmsg: OK
[2026-01-11 02:40:56] 2026-01-11 07:39:50,803 | INFO     | cpuconsumptiontime: 110146 s
[2026-01-11 02:40:56] 2026-01-11 07:39:50,803 | INFO     | nevents: 400
[2026-01-11 02:40:56] 2026-01-11 07:39:50,803 | INFO     | neventsw: 0
[2026-01-11 02:40:56] 2026-01-11 07:39:50,803 | INFO     | pid: 7818
[2026-01-11 02:40:56] 2026-01-11 07:39:50,803 | INFO     | pgrp: 7818
[2026-01-11 02:40:56] 2026-01-11 07:39:50,803 | INFO     | corecount: 8
[2026-01-11 02:40:56] 2026-01-11 07:39:50,804 | INFO     | event service: False
[2026-01-11 02:40:56] 2026-01-11 07:39:50,804 | INFO     | sizes: {0: 2283857, 1: 2284056, 5: 2284318, 12: 2284374, 14401: 2315066, 14405: 2324248, 14409: 2324386}
[2026-01-11 02:40:56] 2026-01-11 07:39:50,804 | INFO     | --------------------------------------------------
[2026-01-11 02:40:56] 2026-01-11 07:39:50,804 | INFO     | 
[2026-01-11 02:40:56] 2026-01-11 07:39:50,804 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 02:40:56] 2026-01-11 07:39:50,818 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 02:40:56] 2026-01-11 07:39:50,818 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 02:40:56] 2026-01-11 07:39:50,819 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 02:40:56] 2026-01-11 07:39:50,819 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 02:40:56] 2026-01-11 07:39:50,819 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 02:40:56] 2026-01-11 07:39:50,819 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 02:40:56] 2026-01-11 07:39:50,819 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 02:40:56] 2026-01-11 07:39:50,820 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 02:40:56] 2026-01-11 07:39:50,820 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 02:40:56] 2026-01-11 07:39:50,820 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 02:40:56] 2026-01-11 07:39:50,820 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 02:40:56] 2026-01-11 07:39:50,820 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 02:40:56] 2026-01-11 07:39:50,820 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 02:40:56] 2026-01-11 07:39:50,821 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 02:40:56] 2026-01-11 07:39:50,821 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 02:40:56] 2026-01-11 07:39:50,821 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 02:40:56] 2026-01-11 07:39:50,821 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 02:40:56] 2026-01-11 07:39:50,821 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 02:40:56] 2026-01-11 07:39:50,821 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 02:40:56] 2026-01-11 07:39:50,821 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 02:40:56] 2026-01-11 07:39:50,821 | INFO     | job 6965941600 has completed (purged errors)
[2026-01-11 02:40:56] 2026-01-11 07:39:50,821 | INFO     | overall cleanup function is called
[2026-01-11 02:40:56] 2026-01-11 07:39:51,829 | INFO     | --- collectZombieJob: --- 10, [7818]
[2026-01-11 02:40:56] 2026-01-11 07:39:51,829 | INFO     | zombie collector waiting for pid 7818
[2026-01-11 02:40:56] 2026-01-11 07:39:51,829 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 02:40:56] 2026-01-11 07:39:51,829 | INFO     | collected zombie processes
[2026-01-11 02:40:56] 2026-01-11 07:39:51,830 | INFO     | will attempt to kill all subprocesses of pid=7818
[2026-01-11 02:40:56] 2026-01-11 07:39:51,988 | INFO     | process IDs to be killed: [7818] (in reverse order)
[2026-01-11 02:40:56] 2026-01-11 07:39:52,034 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 02:40:56] 2026-01-11 07:39:52,034 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 02:40:56] 2026-01-11 07:39:52,037 | INFO     | did not find any defunct processes belonging to 7818
[2026-01-11 02:40:56] 2026-01-11 07:39:52,039 | INFO     | did not find any defunct processes belonging to 7818
[2026-01-11 02:40:56] 2026-01-11 07:39:52,039 | INFO     | ready for new job
[2026-01-11 02:40:56] 2026-01-11 07:39:52,040 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 02:40:56] 2026-01-11 07:39:52,041 | INFO     | ***************************************
[2026-01-11 02:40:56] 2026-01-11 07:39:52,041 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 02:40:56] 2026-01-11 07:39:52,041 | INFO     | ***************************************
[2026-01-11 02:40:56] 2026-01-11 07:39:52,041 | INFO     | 
[2026-01-11 02:40:56] 2026-01-11 07:39:52,042 | INFO     | architecture information:
[2026-01-11 02:40:56] 2026-01-11 07:39:52,043 | INFO     | executing command: cat /etc/os-release
[2026-01-11 02:40:56] 2026-01-11 07:39:52,055 | INFO     | cat /etc/os-release:
[2026-01-11 02:40:56] NAME="CentOS Linux"
[2026-01-11 02:40:56] VERSION="7 (Core)"
[2026-01-11 02:40:56] ID="centos"
[2026-01-11 02:40:56] ID_LIKE="rhel fedora"
[2026-01-11 02:40:56] VERSION_ID="7"
[2026-01-11 02:40:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 02:40:56] ANSI_COLOR="0;31"
[2026-01-11 02:40:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 02:40:56] HOME_URL="https://www.centos.org/"
[2026-01-11 02:40:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 02:40:56] 
[2026-01-11 02:40:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 02:40:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 02:40:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 02:40:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 02:40:56] 
[2026-01-11 02:40:56] 2026-01-11 07:39:52,055 | INFO     | ***************************************
[2026-01-11 02:40:56] 2026-01-11 07:39:52,556 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 02:40:56] 2026-01-11 07:39:52,569 | INFO     | sufficient remaining disk space (23522705408 B)
[2026-01-11 02:40:56] 2026-01-11 07:39:52,570 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 02:40:56] 2026-01-11 07:39:52,570 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 02:40:56] 2026-01-11 07:39:52,570 | INFO     | update_server=False
[2026-01-11 02:40:56] 2026-01-11 07:39:52,570 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 02:40:56] 2026-01-11 07:39:52,571 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 02:40:56] 2026-01-11 07:39:52,571 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 02:40:56] 2026-01-11 07:39:52,571 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 02:40:56] 2026-01-11 07:39:52,613 | INFO     | all job control threads have been joined
[2026-01-11 02:40:56] 2026-01-11 07:39:52,874 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 02:40:56] 2026-01-11 07:39:52,875 | INFO     | aborting loop
[2026-01-11 02:40:56] 2026-01-11 07:39:53,147 | INFO     | all payload control threads have been joined
[2026-01-11 02:40:56] 2026-01-11 07:39:53,413 | INFO     | all data control threads have been joined
[2026-01-11 02:40:56] 2026-01-11 07:39:53,574 | INFO     | [job] retrieve thread has finished
[2026-01-11 02:40:56] 2026-01-11 07:39:53,577 | INFO     | [job] queue monitor thread has finished
[2026-01-11 02:40:56] 2026-01-11 07:39:53,620 | INFO     | [job] control thread has finished
[2026-01-11 02:40:56] 2026-01-11 07:39:53,841 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 02:40:56] 2026-01-11 07:39:53,842 | INFO     | [data] copytool_in thread has finished
[2026-01-11 02:40:56] 2026-01-11 07:39:53,872 | INFO     | [job] validate thread has finished
[2026-01-11 02:40:56] 2026-01-11 07:39:53,876 | INFO     | [payload] failed_post thread has finished
[2026-01-11 02:40:56] 2026-01-11 07:39:53,880 | INFO     | [job] job monitor thread has finished
[2026-01-11 02:40:56] 2026-01-11 07:39:53,911 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 02:40:56] 2026-01-11 07:39:54,153 | INFO     | [payload] control thread has finished
[2026-01-11 02:40:56] 2026-01-11 07:39:54,179 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 02:40:56] 2026-01-11 07:39:54,412 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 02:40:56] 2026-01-11 07:39:54,417 | INFO     | [data] control thread has finished
[2026-01-11 02:40:56] 2026-01-11 07:39:54,578 | INFO     | [data] copytool_out thread has finished
[2026-01-11 02:40:56] 2026-01-11 07:39:54,887 | INFO     | [payload] validate_post thread has finished
[2026-01-11 02:40:56] 2026-01-11 07:39:56,580 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 02:40:56] 2026-01-11 07:40:23,786 | INFO     | PID=19658 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 02:40:56] 2026-01-11 07:40:23,786 | INFO     | .. there are 3 such processes running
[2026-01-11 02:40:56] 2026-01-11 07:40:23,786 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 02:40:56] 2026-01-11 07:40:23,787 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 02:40:56] 2026-01-11 07:40:23,787 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 02:40:56] 2026-01-11 07:40:49,722 | INFO     | [monitor] cgroup control has ended
[2026-01-11 02:40:56] 2026-01-11 07:40:51,367 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140035786884928)>', '<ExcThread(monitor, started 140035487672064)>']
[2026-01-11 02:40:56] 2026-01-11 07:40:51,924 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 02:40:56] 2026-01-11 07:40:51,925 | INFO     | [monitor] control thread has ended
[2026-01-11 02:40:56] 2026-01-11 07:40:56,388 | INFO     | all workflow threads have been joined
[2026-01-11 02:40:56] 2026-01-11 07:40:56,397 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 02:40:56] 2026-01-11 07:40:56,398 | INFO     | traces error code: 0
[2026-01-11 02:40:56] 2026-01-11 07:40:56,399 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 02:40:56] 2026-01-11 07:40:56,536 [wrapper] ==== pilot stdout END ====
[2026-01-11 02:40:56] 2026-01-11 07:40:56,538 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 02:40:56] 2026-01-11 07:40:56,541 [wrapper] pilotpid: 19658
[2026-01-11 02:40:56] 2026-01-11 07:40:56,543 [wrapper] Pilot exit status: 0
[2026-01-11 02:40:56] 2026-01-11 07:40:56,553 [wrapper] pandaids: 6965941600
[2026-01-11 02:40:56] 2026-01-11 07:40:56,593 [wrapper] cleanup supervisor_pilot  4432 19659
[2026-01-11 02:40:56] 2026-01-11 07:40:56,595 [wrapper] Test setup, not cleaning
[2026-01-11 02:40:56] 2026-01-11 07:40:56,597 [wrapper] apfmon messages muted
[2026-01-11 02:40:56] 2026-01-11 07:40:56,600 [wrapper] ==== wrapper stdout END ====
[2026-01-11 02:40:56] 2026-01-11 07:40:56,602 [wrapper] ==== wrapper stderr END ====
[2026-01-11 02:40:56]  *** Error codes and diagnostics ***
[2026-01-11 02:40:56]     "exeErrorCode": 0,
[2026-01-11 02:40:56]     "exeErrorDiag": "",
[2026-01-11 02:40:56]     "pilotErrorCode": 0,
[2026-01-11 02:40:56]     "pilotErrorDiag": "",
[2026-01-11 02:40:56]  *** Listing of results directory ***
[2026-01-11 02:40:56] total 1157952
[2026-01-11 02:40:56] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-11 02:40:56] -rwx------ 1 boincer umatlas     36322 Jan 10 22:34 runpilot2-wrapper.sh
[2026-01-11 02:40:56] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 22:35 queuedata.json
[2026-01-11 02:40:56] -rw-r--r-- 1 boincer umatlas       100 Jan 10 22:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 02:40:56] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 22:38 run_atlas
[2026-01-11 02:40:56] -rw-r--r-- 1 boincer umatlas       105 Jan 10 22:38 job.xml
[2026-01-11 02:40:56] -rw-r--r-- 2 boincer umatlas 930603383 Jan 10 22:39 EVNT.48039248._000056.pool.root.1
[2026-01-11 02:40:56] -rw-r--r-- 2 boincer umatlas    592419 Jan 10 22:39 input.tar.gz
[2026-01-11 02:40:56] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 22:39 start_atlas.sh
[2026-01-11 02:40:56] drwxrwx--x 2 boincer umatlas      4096 Jan 10 22:39 shared
[2026-01-11 02:40:56] -rw-r--r-- 1 boincer umatlas         0 Jan 10 22:39 boinc_lockfile
[2026-01-11 02:40:56] -rw-r--r-- 1 boincer umatlas      2593 Jan 10 22:39 pandaJob.out
[2026-01-11 02:40:56] -rw------- 1 boincer umatlas        57 Jan 10 22:39 setup.sh.local
[2026-01-11 02:40:56] -rw------- 1 boincer umatlas    989548 Jan 10 22:39 agis_schedconf.cvmfs.json
[2026-01-11 02:40:56] drwx------ 5 boincer umatlas      4096 Jan 10 22:39 pilot3
[2026-01-11 02:40:56] -rw-r--r-- 1 boincer umatlas      5953 Jan 11 02:36 init_data.xml
[2026-01-11 02:40:56] -rw------- 1 boincer umatlas 246231463 Jan 11 02:39 HITS.48039250._007068.pool.root.1
[2026-01-11 02:40:56] -rw-r--r-- 1 boincer umatlas       533 Jan 11 02:39 boinc_task_state.xml
[2026-01-11 02:40:56] -rw------- 1 boincer umatlas      1048 Jan 11 02:39 memory_monitor_summary.json
[2026-01-11 02:40:56] -rw------- 1 boincer umatlas        95 Jan 11 02:39 pilot_heartbeat.json
[2026-01-11 02:40:56] -rw------- 1 boincer umatlas   1516240 Jan 11 02:39 agis_ddmendpoints.agis.ALL.json
[2026-01-11 02:40:56] -rw------- 1 boincer umatlas    492530 Jan 11 02:39 log.48039250._007068.job.log.tgz.1
[2026-01-11 02:40:56] -rw------- 1 boincer umatlas      7849 Jan 11 02:39 heartbeat.json
[2026-01-11 02:40:56] -rw-r--r-- 1 boincer umatlas        29 Jan 11 02:40 wrapper_checkpoint.txt
[2026-01-11 02:40:56] -rw-r--r-- 1 boincer umatlas      8192 Jan 11 02:40 boinc_mmap_file
[2026-01-11 02:40:56] -rw------- 1 boincer umatlas      4821 Jan 11 02:40 pilotlog.txt
[2026-01-11 02:40:56] -rw------- 1 boincer umatlas   2000784 Jan 11 02:40 log.48039250._007068.job.log.1
[2026-01-11 02:40:56] -rw------- 1 boincer umatlas       357 Jan 11 02:40 output.list
[2026-01-11 02:40:56] -rw-r--r-- 1 boincer umatlas       620 Jan 11 02:40 runtime_log
[2026-01-11 02:40:56] -rw------- 1 boincer umatlas   2508800 Jan 11 02:40 result.tar.gz
[2026-01-11 02:40:56] -rw-r--r-- 1 boincer umatlas      9343 Jan 11 02:40 runtime_log.err
[2026-01-11 02:40:56] -rw------- 1 boincer umatlas       664 Jan 11 02:40 M0gNDmoO1y8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpihKDmxFaOSm.diag
[2026-01-11 02:40:56] -rw-r--r-- 1 boincer umatlas     21477 Jan 11 02:40 stderr.txt
[2026-01-11 02:40:56] HITS file was successfully produced:
[2026-01-11 02:40:56] -rw------- 1 boincer umatlas 246231463 Jan 11 02:39 shared/HITS.pool.root.1
[2026-01-11 02:40:56]  *** Contents of shared directory: ***
[2026-01-11 02:40:56] total 1152316
[2026-01-11 02:40:56] -rw-r--r-- 2 boincer umatlas 930603383 Jan 10 22:39 ATLAS.root_0
[2026-01-11 02:40:56] -rw-r--r-- 2 boincer umatlas    592419 Jan 10 22:39 input.tar.gz
[2026-01-11 02:40:56] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 22:39 start_atlas.sh
[2026-01-11 02:40:56] -rw------- 1 boincer umatlas 246231463 Jan 11 02:39 HITS.pool.root.1
[2026-01-11 02:40:56] -rw------- 1 boincer umatlas   2508800 Jan 11 02:40 result.tar.gz
02:40:58 (12418): run_atlas exited; CPU time 110417.693688
02:40:58 (12418): called boinc_finish(0)

</stderr_txt>
]]>

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