Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:40:21 (599281): wrapper (7.7.26015): starting
22:40:21 (599281): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 22:40:21] Arguments: --nthreads 8
[2026-01-10 22:40:21] Threads: 8
[2026-01-10 22:40:21] Checking for CVMFS
[2026-01-10 22:40:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 22:40:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 22:40:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 22:40:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 22:40:22] 2.13.3.0 11460 95763 162740 155002 1 260 19917054 32935937 19949 16776704 0 760223589 99.641 695972865 35562 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 22:40:22] CVMFS is ok
[2026-01-10 22:40:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 22:40:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 22:40:22] Further information can be found at the LHC@home message board.
[2026-01-10 22:40:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 22:40:22] Checking for apptainer binary...
[2026-01-10 22:40:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 22:40:22] Running /usr/bin/apptainer --version
[2026-01-10 22:40:22] apptainer version 1.4.5-2.el9
[2026-01-10 22:40:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 22:40:22] c7-3-34.aglt2.org
[2026-01-10 22:40:22] apptainer works
[2026-01-10 22:40:22] Set ATHENA_PROC_NUMBER=8
[2026-01-10 22:40:22] Set ATHENA_CORE_NUMBER=8
[2026-01-10 22:40:22] Starting ATLAS job with PandaID=6965941585
[2026-01-10 22:40:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 04:27:12]  *** The last 200 lines of the pilot log: ***
[2026-01-11 04:27:12] 2026-01-11 09:26:04,729 | INFO     | .. there are 13 such processes running
[2026-01-11 04:27:12] 2026-01-11 09:26:04,921 | INFO     | monitor loop #1351: job 0:6965941585 is in state 'finished'
[2026-01-11 04:27:12] 2026-01-11 09:26:04,921 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:27:12] 2026-01-11 09:26:05,729 | INFO     | time since job start (20735s) is within the limit (349056.0s)
[2026-01-11 04:27:12] 2026-01-11 09:26:07,427 | INFO     | monitor loop #1352: job 0:6965941585 is in state 'finished'
[2026-01-11 04:27:12] 2026-01-11 09:26:07,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:27:12] 2026-01-11 09:26:07,735 | INFO     | time since job start (20737s) is within the limit (349056.0s)
[2026-01-11 04:27:12] 2026-01-11 09:26:08,082 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 04:27:12] 2026-01-11 09:26:08,088 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3173.0463020833336
[2026-01-11 04:27:12] 2026-01-11 09:26:08,100 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6965941585/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 04:27:12] 2026-01-11 09:26:08,101 | INFO     | extracted standard info from prmon json
[2026-01-11 04:27:12] 2026-01-11 09:26:08,101 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 04:27:12] 2026-01-11 09:26:08,101 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 04:27:12] 2026-01-11 09:26:08,101 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 04:27:12] 2026-01-11 09:26:08,101 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 04:27:12] 2026-01-11 09:26:08,106 | INFO     | fitting pss+swap vs Time
[2026-01-11 04:27:12] 2026-01-11 09:26:08,106 | INFO     | sum of square deviations: 12187492157.011814
[2026-01-11 04:27:12] 2026-01-11 09:26:08,108 | INFO     | sum of deviations: 145301308243.34106
[2026-01-11 04:27:12] 2026-01-11 09:26:08,108 | INFO     | mean x: 1768113191.5764706
[2026-01-11 04:27:12] 2026-01-11 09:26:08,108 | INFO     | mean y: 2517606.217647059
[2026-01-11 04:27:12] 2026-01-11 09:26:08,108 | INFO     | intersect: -21077221896.265896
[2026-01-11 04:27:12] 2026-01-11 09:26:08,109 | INFO     | chi2: 2.8310728949702524
[2026-01-11 04:27:12] 2026-01-11 09:26:08,109 | INFO     | sum of square deviations: 11657685501.982027
[2026-01-11 04:27:12] 2026-01-11 09:26:08,111 | INFO     | sum of deviations: 163512501035.58505
[2026-01-11 04:27:12] 2026-01-11 09:26:08,111 | INFO     | mean x: 1768113039.077612
[2026-01-11 04:27:12] 2026-01-11 09:26:08,111 | INFO     | mean y: 2522772.1313432837
[2026-01-11 04:27:12] 2026-01-11 09:26:08,111 | INFO     | intersect: -24797304353.42077
[2026-01-11 04:27:12] 2026-01-11 09:26:08,112 | INFO     | chi2: 2.138941043764402
[2026-01-11 04:27:12] 2026-01-11 09:26:08,112 | INFO     | current chi2=2.138941043764402 (change=24.447687392137006 %)
[2026-01-11 04:27:12] 2026-01-11 09:26:08,112 | INFO     | right removable region: 334
[2026-01-11 04:27:12] 2026-01-11 09:26:08,112 | INFO     | sum of square deviations: 11657669641.982027
[2026-01-11 04:27:12] 2026-01-11 09:26:08,114 | INFO     | sum of deviations: 74584274971.1582
[2026-01-11 04:27:12] 2026-01-11 09:26:08,114 | INFO     | mean x: 1768113344.077612
[2026-01-11 04:27:12] 2026-01-11 09:26:08,114 | INFO     | mean y: 2537882.647761194
[2026-01-11 04:27:12] 2026-01-11 09:26:08,115 | INFO     | intersect: -11309624486.403355
[2026-01-11 04:27:12] 2026-01-11 09:26:08,115 | INFO     | chi2: 1.022554128764999
[2026-01-11 04:27:12] 2026-01-11 09:26:08,115 | INFO     | current chi2=1.022554128764999 (change=63.881038507284934 %)
[2026-01-11 04:27:12] 2026-01-11 09:26:08,115 | INFO     | sum of square deviations: 11143428814.4515
[2026-01-11 04:27:12] 2026-01-11 09:26:08,117 | INFO     | sum of deviations: 46929273723.13342
[2026-01-11 04:27:12] 2026-01-11 09:26:08,117 | INFO     | mean x: 1768113496.5787878
[2026-01-11 04:27:12] 2026-01-11 09:26:08,117 | INFO     | mean y: 2546073.533333333
[2026-01-11 04:27:12] 2026-01-11 09:26:08,118 | INFO     | intersect: -7443661340.37356
[2026-01-11 04:27:12] 2026-01-11 09:26:08,118 | INFO     | chi2: 0.8259478595889888
[2026-01-11 04:27:12] 2026-01-11 09:26:08,118 | INFO     | current chi2=0.8259478595889888 (change=19.226979153999768 %)
[2026-01-11 04:27:12] 2026-01-11 09:26:08,118 | INFO     | left removable region: 20
[2026-01-11 04:27:12] 2026-01-11 09:26:08,118 | INFO     | sum of square deviations: 9599877250.347172
[2026-01-11 04:27:12] 2026-01-11 09:26:08,120 | INFO     | sum of deviations: 35397172744.66243
[2026-01-11 04:27:12] 2026-01-11 09:26:08,120 | INFO     | mean x: 1768113618.5828025
[2026-01-11 04:27:12] 2026-01-11 09:26:08,120 | INFO     | mean y: 2561343.974522293
[2026-01-11 04:27:12] 2026-01-11 09:26:08,120 | INFO     | intersect: -6516920265.741087
[2026-01-11 04:27:12] 2026-01-11 09:26:08,121 | INFO     | chi2: 0.004344104567579517
[2026-01-11 04:27:12] 2026-01-11 09:26:08,121 | INFO     | current memory leak: 3.69 B/s (using 314 data points, chi2=0.00)
[2026-01-11 04:27:12] 2026-01-11 09:26:08,121 | INFO     | could have reported an average CPU frequency of 3204 MHz (15 samples)
[2026-01-11 04:27:12] 2026-01-11 09:26:08,121 | INFO     | ..............................
[2026-01-11 04:27:12] 2026-01-11 09:26:08,121 | INFO     | . Timing measurements:
[2026-01-11 04:27:12] 2026-01-11 09:26:08,122 | INFO     | . get job = 0 s
[2026-01-11 04:27:12] 2026-01-11 09:26:08,122 | INFO     | . initial setup = 2 s
[2026-01-11 04:27:12] 2026-01-11 09:26:08,122 | INFO     | . payload setup = 3 s
[2026-01-11 04:27:12] 2026-01-11 09:26:08,122 | INFO     | . stage-in = 0 s
[2026-01-11 04:27:12] 2026-01-11 09:26:08,122 | INFO     | . payload execution = 20700 s
[2026-01-11 04:27:12] 2026-01-11 09:26:08,122 | INFO     | . stage-out = 2 s
[2026-01-11 04:27:12] 2026-01-11 09:26:08,122 | INFO     | . log creation = 0 s
[2026-01-11 04:27:12] 2026-01-11 09:26:08,122 | INFO     | ..............................
[2026-01-11 04:27:12] 2026-01-11 09:26:08,355 | INFO     | 
[2026-01-11 04:27:12] 2026-01-11 09:26:08,355 | INFO     | job summary report
[2026-01-11 04:27:12] 2026-01-11 09:26:08,356 | INFO     | --------------------------------------------------
[2026-01-11 04:27:12] 2026-01-11 09:26:08,356 | INFO     | PanDA job id: 6965941585
[2026-01-11 04:27:12] 2026-01-11 09:26:08,356 | INFO     | task id: 48039250
[2026-01-11 04:27:12] 2026-01-11 09:26:08,356 | INFO     | errors: (none)
[2026-01-11 04:27:12] 2026-01-11 09:26:08,356 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 04:27:12] 2026-01-11 09:26:08,356 | INFO     | pilot state: finished 
[2026-01-11 04:27:12] 2026-01-11 09:26:08,356 | INFO     | transexitcode: 0
[2026-01-11 04:27:12] 2026-01-11 09:26:08,356 | INFO     | exeerrorcode: 0
[2026-01-11 04:27:12] 2026-01-11 09:26:08,356 | INFO     | exeerrordiag: 
[2026-01-11 04:27:12] 2026-01-11 09:26:08,356 | INFO     | exitcode: 0
[2026-01-11 04:27:12] 2026-01-11 09:26:08,356 | INFO     | exitmsg: OK
[2026-01-11 04:27:12] 2026-01-11 09:26:08,356 | INFO     | cpuconsumptiontime: 41842 s
[2026-01-11 04:27:12] 2026-01-11 09:26:08,356 | INFO     | nevents: 400
[2026-01-11 04:27:12] 2026-01-11 09:26:08,356 | INFO     | neventsw: 0
[2026-01-11 04:27:12] 2026-01-11 09:26:08,356 | INFO     | pid: 623330
[2026-01-11 04:27:12] 2026-01-11 09:26:08,356 | INFO     | pgrp: 623330
[2026-01-11 04:27:12] 2026-01-11 09:26:08,356 | INFO     | corecount: 8
[2026-01-11 04:27:12] 2026-01-11 09:26:08,357 | INFO     | event service: False
[2026-01-11 04:27:12] 2026-01-11 09:26:08,357 | INFO     | sizes: {0: 2283855, 1: 2284054, 4: 2284316, 11: 2284344, 20708: 2318362, 20710: 2327360, 20713: 2327544, 20723: 2327738}
[2026-01-11 04:27:12] 2026-01-11 09:26:08,357 | INFO     | --------------------------------------------------
[2026-01-11 04:27:12] 2026-01-11 09:26:08,357 | INFO     | 
[2026-01-11 04:27:12] 2026-01-11 09:26:08,357 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-11 04:27:12] 2026-01-11 09:26:08,378 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 04:27:12] 2026-01-11 09:26:08,378 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 04:27:12] 2026-01-11 09:26:08,378 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 04:27:12] 2026-01-11 09:26:08,378 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 04:27:12] 2026-01-11 09:26:08,378 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 04:27:12] 2026-01-11 09:26:08,379 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 04:27:12] 2026-01-11 09:26:08,379 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 04:27:12] 2026-01-11 09:26:08,379 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 04:27:12] 2026-01-11 09:26:08,379 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 04:27:12] 2026-01-11 09:26:08,379 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 04:27:12] 2026-01-11 09:26:08,379 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 04:27:12] 2026-01-11 09:26:08,379 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 04:27:12] 2026-01-11 09:26:08,379 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 04:27:12] 2026-01-11 09:26:08,379 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 04:27:12] 2026-01-11 09:26:08,379 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 04:27:12] 2026-01-11 09:26:08,379 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 04:27:12] 2026-01-11 09:26:08,379 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 04:27:12] 2026-01-11 09:26:08,379 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 04:27:12] 2026-01-11 09:26:08,379 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 04:27:12] 2026-01-11 09:26:08,379 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 04:27:12] 2026-01-11 09:26:08,379 | INFO     | job 6965941585 has completed (purged errors)
[2026-01-11 04:27:12] 2026-01-11 09:26:08,380 | INFO     | overall cleanup function is called
[2026-01-11 04:27:12] 2026-01-11 09:26:09,387 | INFO     | --- collectZombieJob: --- 10, [623330]
[2026-01-11 04:27:12] 2026-01-11 09:26:09,387 | INFO     | zombie collector waiting for pid 623330
[2026-01-11 04:27:12] 2026-01-11 09:26:09,388 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 04:27:12] 2026-01-11 09:26:09,388 | INFO     | collected zombie processes
[2026-01-11 04:27:12] 2026-01-11 09:26:09,388 | INFO     | will attempt to kill all subprocesses of pid=623330
[2026-01-11 04:27:12] 2026-01-11 09:26:09,797 | INFO     | process IDs to be killed: [623330] (in reverse order)
[2026-01-11 04:27:12] 2026-01-11 09:26:09,934 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 04:27:12] 2026-01-11 09:26:09,934 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 04:27:12] 2026-01-11 09:26:09,950 | INFO     | did not find any defunct processes belonging to 623330
[2026-01-11 04:27:12] 2026-01-11 09:26:09,966 | INFO     | did not find any defunct processes belonging to 623330
[2026-01-11 04:27:12] 2026-01-11 09:26:09,966 | INFO     | ready for new job
[2026-01-11 04:27:12] 2026-01-11 09:26:09,966 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 04:27:12] 2026-01-11 09:26:09,968 | INFO     | ***************************************
[2026-01-11 04:27:12] 2026-01-11 09:26:09,969 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 04:27:12] 2026-01-11 09:26:09,969 | INFO     | ***************************************
[2026-01-11 04:27:12] 2026-01-11 09:26:09,969 | INFO     | 
[2026-01-11 04:27:12] 2026-01-11 09:26:09,973 | INFO     | architecture information:
[2026-01-11 04:27:12] 2026-01-11 09:26:09,974 | INFO     | executing command: cat /etc/os-release
[2026-01-11 04:27:12] 2026-01-11 09:26:09,989 | INFO     | cat /etc/os-release:
[2026-01-11 04:27:12] NAME="CentOS Linux"
[2026-01-11 04:27:12] VERSION="7 (Core)"
[2026-01-11 04:27:12] ID="centos"
[2026-01-11 04:27:12] ID_LIKE="rhel fedora"
[2026-01-11 04:27:12] VERSION_ID="7"
[2026-01-11 04:27:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 04:27:12] ANSI_COLOR="0;31"
[2026-01-11 04:27:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 04:27:12] HOME_URL="https://www.centos.org/"
[2026-01-11 04:27:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 04:27:12] 
[2026-01-11 04:27:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 04:27:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 04:27:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 04:27:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 04:27:12] 
[2026-01-11 04:27:12] 2026-01-11 09:26:09,989 | INFO     | ***************************************
[2026-01-11 04:27:12] 2026-01-11 09:26:10,492 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-11 04:27:12] 2026-01-11 09:26:10,553 | INFO     | sufficient remaining disk space (75101110272 B)
[2026-01-11 04:27:12] 2026-01-11 09:26:10,553 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 04:27:12] 2026-01-11 09:26:10,553 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 04:27:12] 2026-01-11 09:26:10,553 | INFO     | update_server=False
[2026-01-11 04:27:12] 2026-01-11 09:26:10,553 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 04:27:12] 2026-01-11 09:26:10,592 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 04:27:12] 2026-01-11 09:26:10,934 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:27:12] 2026-01-11 09:26:10,935 | INFO     | aborting loop
[2026-01-11 04:27:12] 2026-01-11 09:26:11,260 | INFO     | all data control threads have been joined
[2026-01-11 04:27:12] 2026-01-11 09:26:11,559 | INFO     | [job] retrieve thread has finished
[2026-01-11 04:27:12] 2026-01-11 09:26:11,601 | INFO     | [payload] validate_post thread has finished
[2026-01-11 04:27:12] 2026-01-11 09:26:11,802 | INFO     | all job control threads have been joined
[2026-01-11 04:27:12] 2026-01-11 09:26:11,860 | INFO     | all payload control threads have been joined
[2026-01-11 04:27:12] 2026-01-11 09:26:11,906 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 04:27:12] 2026-01-11 09:26:11,940 | INFO     | [job] job monitor thread has finished
[2026-01-11 04:27:12] 2026-01-11 09:26:11,988 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 04:27:12] 2026-01-11 09:26:12,028 | INFO     | [job] validate thread has finished
[2026-01-11 04:27:12] 2026-01-11 09:26:12,265 | INFO     | [data] control thread has finished
[2026-01-11 04:27:12] 2026-01-11 09:26:12,601 | INFO     | [data] copytool_out thread has finished
[2026-01-11 04:27:12] 2026-01-11 09:26:12,801 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 04:27:12] 2026-01-11 09:26:12,808 | INFO     | [job] control thread has finished
[2026-01-11 04:27:12] 2026-01-11 09:26:12,859 | INFO     | [data] copytool_in thread has finished
[2026-01-11 04:27:12] 2026-01-11 09:26:12,865 | INFO     | [payload] control thread has finished
[2026-01-11 04:27:12] 2026-01-11 09:26:12,944 | INFO     | [payload] failed_post thread has finished
[2026-01-11 04:27:12] 2026-01-11 09:26:13,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:27:12] 2026-01-11 09:26:13,289 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 04:27:12] 2026-01-11 09:26:14,203 | INFO     | [job] queue monitor thread has finished
[2026-01-11 04:27:12] 2026-01-11 09:26:17,296 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 04:27:12] 2026-01-11 09:26:21,157 | INFO     | job.realtimelogging is not enabled
[2026-01-11 04:27:12] 2026-01-11 09:26:22,163 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 04:27:12] 2026-01-11 09:26:39,798 | INFO     | 20741s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-11 04:27:12] 2026-01-11 09:26:41,296 | INFO     | PID=604406 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 04:27:12] 2026-01-11 09:26:41,296 | INFO     | .. there are 13 such processes running
[2026-01-11 04:27:12] 2026-01-11 09:26:41,296 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 04:27:12] 2026-01-11 09:26:41,296 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 04:27:12] 2026-01-11 09:26:41,296 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 04:27:12] 2026-01-11 09:27:05,495 | INFO     | [monitor] cgroup control has ended
[2026-01-11 04:27:12] 2026-01-11 09:27:07,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140420295747392)>', '<ExcThread(monitor, started 140419593664256)>']
[2026-01-11 04:27:12] 2026-01-11 09:27:07,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 04:27:12] 2026-01-11 09:27:07,437 | INFO     | [monitor] control thread has ended
[2026-01-11 04:27:12] 2026-01-11 09:27:12,202 | INFO     | all workflow threads have been joined
[2026-01-11 04:27:12] 2026-01-11 09:27:12,202 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 04:27:12] 2026-01-11 09:27:12,203 | INFO     | traces error code: 0
[2026-01-11 04:27:12] 2026-01-11 09:27:12,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 04:27:12] 2026-01-11 09:27:12,363 [wrapper] ==== pilot stdout END ====
[2026-01-11 04:27:12] 2026-01-11 09:27:12,370 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 04:27:12] 2026-01-11 09:27:12,393 [wrapper] pilotpid: 604406
[2026-01-11 04:27:12] 2026-01-11 09:27:12,409 [wrapper] Pilot exit status: 0
[2026-01-11 04:27:12] 2026-01-11 09:27:12,463 [wrapper] pandaids: 6965941585
[2026-01-11 04:27:12] 2026-01-11 09:27:12,542 [wrapper] cleanup supervisor_pilot 1395010 604407
[2026-01-11 04:27:12] 2026-01-11 09:27:12,546 [wrapper] Test setup, not cleaning
[2026-01-11 04:27:12] 2026-01-11 09:27:12,552 [wrapper] apfmon messages muted
[2026-01-11 04:27:12] 2026-01-11 09:27:12,555 [wrapper] ==== wrapper stdout END ====
[2026-01-11 04:27:12] 2026-01-11 09:27:12,561 [wrapper] ==== wrapper stderr END ====
[2026-01-11 04:27:12]  *** Error codes and diagnostics ***
[2026-01-11 04:27:12]     "exeErrorCode": 0,
[2026-01-11 04:27:12]     "exeErrorDiag": "",
[2026-01-11 04:27:12]     "pilotErrorCode": 0,
[2026-01-11 04:27:12]     "pilotErrorDiag": "",
[2026-01-11 04:27:12]  *** Listing of results directory ***
[2026-01-11 04:27:12] total 1165064
[2026-01-11 04:27:12] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-11 04:27:12] -rwx------. 1 boincer umatlas     36322 Jan 10 22:34 runpilot2-wrapper.sh
[2026-01-11 04:27:12] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 22:35 queuedata.json
[2026-01-11 04:27:12] -rw-r--r--. 1 boincer umatlas       100 Jan 10 22:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 04:27:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 22:40 run_atlas
[2026-01-11 04:27:12] -rw-r--r--. 1 boincer umatlas       105 Jan 10 22:40 job.xml
[2026-01-11 04:27:12] -rw-r--r--. 2 boincer umatlas 930603383 Jan 10 22:40 EVNT.48039248._000056.pool.root.1
[2026-01-11 04:27:12] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:40 start_atlas.sh
[2026-01-11 04:27:12] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 22:40 shared
[2026-01-11 04:27:12] -rw-r--r--. 2 boincer umatlas    592423 Jan 10 22:40 input.tar.gz
[2026-01-11 04:27:12] -rw-r--r--. 1 boincer umatlas         0 Jan 10 22:40 boinc_lockfile
[2026-01-11 04:27:12] -rw-r--r--. 1 boincer umatlas      2592 Jan 10 22:40 pandaJob.out
[2026-01-11 04:27:12] -rw-------. 1 boincer umatlas        57 Jan 10 22:40 setup.sh.local
[2026-01-11 04:27:12] -rw-------. 1 boincer umatlas    989548 Jan 10 22:40 agis_schedconf.cvmfs.json
[2026-01-11 04:27:12] drwx------. 5 boincer umatlas      4096 Jan 10 22:40 pilot3
[2026-01-11 04:27:12] -rw-r--r--. 1 boincer umatlas      6946 Jan 11 04:21 init_data.xml
[2026-01-11 04:27:12] -rw-r--r--. 1 boincer umatlas       531 Jan 11 04:25 boinc_task_state.xml
[2026-01-11 04:27:12] -rw-------. 1 boincer umatlas 251887540 Jan 11 04:25 HITS.48039250._007053.pool.root.1
[2026-01-11 04:27:12] -rw-------. 1 boincer umatlas      1042 Jan 11 04:25 memory_monitor_summary.json
[2026-01-11 04:27:12] -rw-------. 1 boincer umatlas        95 Jan 11 04:25 pilot_heartbeat.json
[2026-01-11 04:27:12] -rw-------. 1 boincer umatlas   1516240 Jan 11 04:25 agis_ddmendpoints.agis.ALL.json
[2026-01-11 04:27:12] -rw-------. 1 boincer umatlas    555317 Jan 11 04:25 log.48039250._007053.job.log.tgz.1
[2026-01-11 04:27:12] -rw-------. 1 boincer umatlas      7788 Jan 11 04:26 heartbeat.json
[2026-01-11 04:27:12] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 04:27 boinc_mmap_file
[2026-01-11 04:27:12] -rw-r--r--. 1 boincer umatlas        28 Jan 11 04:27 wrapper_checkpoint.txt
[2026-01-11 04:27:12] -rw-------. 1 boincer umatlas      5011 Jan 11 04:27 pilotlog.txt
[2026-01-11 04:27:12] -rw-------. 1 boincer umatlas   2748656 Jan 11 04:27 log.48039250._007053.job.log.1
[2026-01-11 04:27:12] -rw-------. 1 boincer umatlas       357 Jan 11 04:27 output.list
[2026-01-11 04:27:12] -rw-r--r--. 1 boincer umatlas       620 Jan 11 04:27 runtime_log
[2026-01-11 04:27:12] -rw-------. 1 boincer umatlas   3328000 Jan 11 04:27 result.tar.gz
[2026-01-11 04:27:12] -rw-------. 1 boincer umatlas       658 Jan 11 04:27 vGTNDmoO1y8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgihKDm8ZKsom.diag
[2026-01-11 04:27:12] -rw-r--r--. 1 boincer umatlas      9338 Jan 11 04:27 runtime_log.err
[2026-01-11 04:27:12] -rw-r--r--. 1 boincer umatlas     21351 Jan 11 04:27 stderr.txt
[2026-01-11 04:27:12] HITS file was successfully produced:
[2026-01-11 04:27:12] -rw-------. 1 boincer umatlas 251887540 Jan 11 04:25 shared/HITS.pool.root.1
[2026-01-11 04:27:12]  *** Contents of shared directory: ***
[2026-01-11 04:27:12] total 1158636
[2026-01-11 04:27:12] -rw-r--r--. 2 boincer umatlas 930603383 Jan 10 22:40 ATLAS.root_0
[2026-01-11 04:27:12] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:40 start_atlas.sh
[2026-01-11 04:27:12] -rw-r--r--. 2 boincer umatlas    592423 Jan 10 22:40 input.tar.gz
[2026-01-11 04:27:12] -rw-------. 1 boincer umatlas 251887540 Jan 11 04:25 HITS.pool.root.1
[2026-01-11 04:27:12] -rw-------. 1 boincer umatlas   3328000 Jan 11 04:27 result.tar.gz
04:27:13 (599281): run_atlas exited; CPU time 42617.912686
04:27:13 (599281): called boinc_finish(0)

</stderr_txt>
]]>

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