Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:38:26 (543953): wrapper (7.7.26015): starting
22:38:26 (543953): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 22:38:26] Arguments: --nthreads 8
[2026-01-10 22:38:26] Threads: 8
[2026-01-10 22:38:26] Checking for CVMFS
[2026-01-10 22:38:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 22:38:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 22:38:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 22:38:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 22:38:26] 2.13.3.0 11460 95761 156280 155002 3 128 19916756 32935937 17973 16776704 0 760068400 99.641 695972847 35562 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 22:38:26] CVMFS is ok
[2026-01-10 22:38:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 22:38:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 22:38:26] Further information can be found at the LHC@home message board.
[2026-01-10 22:38:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 22:38:26] Checking for apptainer binary...
[2026-01-10 22:38:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 22:38:26] Running /usr/bin/apptainer --version
[2026-01-10 22:38:26] apptainer version 1.4.5-2.el9
[2026-01-10 22:38:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 22:38:26] c7-3-34.aglt2.org
[2026-01-10 22:38:26] apptainer works
[2026-01-10 22:38:26] Set ATHENA_PROC_NUMBER=8
[2026-01-10 22:38:26] Set ATHENA_CORE_NUMBER=8
[2026-01-10 22:38:26] Starting ATLAS job with PandaID=6965941561
[2026-01-10 22:38:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 02:09:03]  *** The last 200 lines of the pilot log: ***
[2026-01-11 02:09:03] 2026-01-11 07:08:23,330 | INFO     | monitor loop #827: job 0:6965941561 is in state 'finished'
[2026-01-11 02:09:03] 2026-01-11 07:08:23,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 02:09:03] 2026-01-11 07:08:23,951 | INFO     | time since job start (12587s) is within the limit (349056.0s)
[2026-01-11 02:09:03] 2026-01-11 07:08:25,835 | INFO     | monitor loop #828: job 0:6965941561 is in state 'finished'
[2026-01-11 02:09:03] 2026-01-11 07:08:25,835 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 02:09:03] 2026-01-11 07:08:25,957 | INFO     | time since job start (12589s) is within the limit (349056.0s)
[2026-01-11 02:09:03] 2026-01-11 07:08:27,968 | INFO     | time since job start (12591s) is within the limit (349056.0s)
[2026-01-11 02:09:03] 2026-01-11 07:08:28,180 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 02:09:03] 2026-01-11 07:08:28,185 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3123.386677083334
[2026-01-11 02:09:03] 2026-01-11 07:08:28,199 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965941561/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 02:09:03] 2026-01-11 07:08:28,200 | INFO     | extracted standard info from prmon json
[2026-01-11 02:09:03] 2026-01-11 07:08:28,200 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 02:09:03] 2026-01-11 07:08:28,200 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 02:09:03] 2026-01-11 07:08:28,200 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 02:09:03] 2026-01-11 07:08:28,200 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 02:09:03] 2026-01-11 07:08:28,204 | INFO     | fitting pss+swap vs Time
[2026-01-11 02:09:03] 2026-01-11 07:08:28,205 | INFO     | sum of square deviations: 2710616345.48057
[2026-01-11 02:09:03] 2026-01-11 07:08:28,206 | INFO     | sum of deviations: 24401228415.04855
[2026-01-11 02:09:03] 2026-01-11 07:08:28,206 | INFO     | mean x: 1768108992.5097086
[2026-01-11 02:09:03] 2026-01-11 07:08:28,206 | INFO     | mean y: 2535115.475728155
[2026-01-11 02:09:03] 2026-01-11 07:08:28,206 | INFO     | intersect: -15914151678.236382
[2026-01-11 02:09:03] 2026-01-11 07:08:28,206 | INFO     | chi2: 1.1584260228799341
[2026-01-11 02:09:03] 2026-01-11 07:08:28,206 | INFO     | sum of square deviations: 2517990087.9800944
[2026-01-11 02:09:03] 2026-01-11 07:08:28,207 | INFO     | sum of deviations: 23397697349.358246
[2026-01-11 02:09:03] 2026-01-11 07:08:28,207 | INFO     | mean x: 1768108840.0099502
[2026-01-11 02:09:03] 2026-01-11 07:08:28,207 | INFO     | mean y: 2534320.8208955224
[2026-01-11 02:09:03] 2026-01-11 07:08:28,208 | INFO     | intersect: -16427107605.396542
[2026-01-11 02:09:03] 2026-01-11 07:08:28,208 | INFO     | chi2: 1.1590104191362598
[2026-01-11 02:09:03] 2026-01-11 07:08:28,208 | INFO     | current chi2=1.1590104191362598 (change=-0.05044743857469784 %)
[2026-01-11 02:09:03] 2026-01-11 07:08:28,208 | INFO     | right removable region: 200
[2026-01-11 02:09:03] 2026-01-11 07:08:28,208 | INFO     | sum of square deviations: 2517988867.9800944
[2026-01-11 02:09:03] 2026-01-11 07:08:28,209 | INFO     | sum of deviations: -1954917065.711442
[2026-01-11 02:09:03] 2026-01-11 07:08:28,209 | INFO     | mean x: 1768109145.0099502
[2026-01-11 02:09:03] 2026-01-11 07:08:28,209 | INFO     | mean y: 2555754.855721393
[2026-01-11 02:09:03] 2026-01-11 07:08:28,209 | INFO     | intersect: 1375280942.6335347
[2026-01-11 02:09:03] 2026-01-11 07:08:28,210 | INFO     | chi2: 0.014035676139595867
[2026-01-11 02:09:03] 2026-01-11 07:08:28,210 | INFO     | current chi2=0.014035676139595867 (change=98.78838390519732 %)
[2026-01-11 02:09:03] 2026-01-11 07:08:28,210 | INFO     | sum of square deviations: 2334710402.979599
[2026-01-11 02:09:03] 2026-01-11 07:08:28,211 | INFO     | sum of deviations: -2482143278.4081664
[2026-01-11 02:09:03] 2026-01-11 07:08:28,211 | INFO     | mean x: 1768109297.510204
[2026-01-11 02:09:03] 2026-01-11 07:08:28,211 | INFO     | mean y: 2556186.9540816327
[2026-01-11 02:09:03] 2026-01-11 07:08:28,211 | INFO     | intersect: 1882318491.8228137
[2026-01-11 02:09:03] 2026-01-11 07:08:28,211 | INFO     | chi2: 0.013359383586500927
[2026-01-11 02:09:03] 2026-01-11 07:08:28,211 | INFO     | current chi2=0.013359383586500927 (change=4.818382430377255 %)
[2026-01-11 02:09:03] 2026-01-11 07:08:28,211 | INFO     | left removable region: 20
[2026-01-11 02:09:03] 2026-01-11 07:08:28,212 | INFO     | sum of square deviations: 1808337254.9777846
[2026-01-11 02:09:03] 2026-01-11 07:08:28,212 | INFO     | sum of deviations: -1153342023.1111083
[2026-01-11 02:09:03] 2026-01-11 07:08:28,212 | INFO     | mean x: 1768109419.511111
[2026-01-11 02:09:03] 2026-01-11 07:08:28,213 | INFO     | mean y: 2554169.8055555555
[2026-01-11 02:09:03] 2026-01-11 07:08:28,213 | INFO     | intersect: 1130239223.778413
[2026-01-11 02:09:03] 2026-01-11 07:08:28,213 | INFO     | chi2: 0.011718138916340087
[2026-01-11 02:09:03] 2026-01-11 07:08:28,213 | INFO     | current memory leak: -0.64 B/s (using 180 data points, chi2=0.01)
[2026-01-11 02:09:03] 2026-01-11 07:08:28,213 | INFO     | could have reported an average CPU frequency of 3185 MHz (10 samples)
[2026-01-11 02:09:03] 2026-01-11 07:08:28,213 | INFO     | ..............................
[2026-01-11 02:09:03] 2026-01-11 07:08:28,214 | INFO     | . Timing measurements:
[2026-01-11 02:09:03] 2026-01-11 07:08:28,214 | INFO     | . get job = 0 s
[2026-01-11 02:09:03] 2026-01-11 07:08:28,214 | INFO     | . initial setup = 2 s
[2026-01-11 02:09:03] 2026-01-11 07:08:28,214 | INFO     | . payload setup = 5 s
[2026-01-11 02:09:03] 2026-01-11 07:08:28,214 | INFO     | . stage-in = 0 s
[2026-01-11 02:09:03] 2026-01-11 07:08:28,214 | INFO     | . payload execution = 12554 s
[2026-01-11 02:09:03] 2026-01-11 07:08:28,214 | INFO     | . stage-out = 2 s
[2026-01-11 02:09:03] 2026-01-11 07:08:28,214 | INFO     | . log creation = 0 s
[2026-01-11 02:09:03] 2026-01-11 07:08:28,214 | INFO     | ..............................
[2026-01-11 02:09:03] 2026-01-11 07:08:28,285 | INFO     | 
[2026-01-11 02:09:03] 2026-01-11 07:08:28,286 | INFO     | job summary report
[2026-01-11 02:09:03] 2026-01-11 07:08:28,287 | INFO     | --------------------------------------------------
[2026-01-11 02:09:03] 2026-01-11 07:08:28,287 | INFO     | PanDA job id: 6965941561
[2026-01-11 02:09:03] 2026-01-11 07:08:28,287 | INFO     | task id: 48039250
[2026-01-11 02:09:03] 2026-01-11 07:08:28,287 | INFO     | errors: (none)
[2026-01-11 02:09:03] 2026-01-11 07:08:28,287 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 02:09:03] 2026-01-11 07:08:28,287 | INFO     | pilot state: finished 
[2026-01-11 02:09:03] 2026-01-11 07:08:28,287 | INFO     | transexitcode: 0
[2026-01-11 02:09:03] 2026-01-11 07:08:28,287 | INFO     | exeerrorcode: 0
[2026-01-11 02:09:03] 2026-01-11 07:08:28,287 | INFO     | exeerrordiag: 
[2026-01-11 02:09:03] 2026-01-11 07:08:28,287 | INFO     | exitcode: 0
[2026-01-11 02:09:03] 2026-01-11 07:08:28,287 | INFO     | exitmsg: OK
[2026-01-11 02:09:03] 2026-01-11 07:08:28,287 | INFO     | cpuconsumptiontime: 44615 s
[2026-01-11 02:09:03] 2026-01-11 07:08:28,287 | INFO     | nevents: 400
[2026-01-11 02:09:03] 2026-01-11 07:08:28,287 | INFO     | neventsw: 0
[2026-01-11 02:09:03] 2026-01-11 07:08:28,287 | INFO     | pid: 554018
[2026-01-11 02:09:03] 2026-01-11 07:08:28,287 | INFO     | pgrp: 554018
[2026-01-11 02:09:03] 2026-01-11 07:08:28,287 | INFO     | corecount: 8
[2026-01-11 02:09:03] 2026-01-11 07:08:28,287 | INFO     | event service: False
[2026-01-11 02:09:03] 2026-01-11 07:08:28,288 | INFO     | sizes: {0: 2283855, 1: 2284054, 4: 2284316, 11: 2284344, 12563: 2314534, 12567: 2323716, 12577: 2323854}
[2026-01-11 02:09:03] 2026-01-11 07:08:28,288 | INFO     | --------------------------------------------------
[2026-01-11 02:09:03] 2026-01-11 07:08:28,288 | INFO     | 
[2026-01-11 02:09:03] 2026-01-11 07:08:28,288 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 02:09:03] 2026-01-11 07:08:28,313 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 02:09:03] 2026-01-11 07:08:28,314 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 02:09:03] 2026-01-11 07:08:28,314 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 02:09:03] 2026-01-11 07:08:28,314 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 02:09:03] 2026-01-11 07:08:28,314 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 02:09:03] 2026-01-11 07:08:28,314 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 02:09:03] 2026-01-11 07:08:28,314 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 02:09:03] 2026-01-11 07:08:28,314 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 02:09:03] 2026-01-11 07:08:28,314 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 02:09:03] 2026-01-11 07:08:28,314 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 02:09:03] 2026-01-11 07:08:28,314 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 02:09:03] 2026-01-11 07:08:28,314 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 02:09:03] 2026-01-11 07:08:28,314 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 02:09:03] 2026-01-11 07:08:28,314 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 02:09:03] 2026-01-11 07:08:28,314 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 02:09:03] 2026-01-11 07:08:28,314 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 02:09:03] 2026-01-11 07:08:28,315 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 02:09:03] 2026-01-11 07:08:28,315 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 02:09:03] 2026-01-11 07:08:28,315 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 02:09:03] 2026-01-11 07:08:28,315 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 02:09:03] 2026-01-11 07:08:28,315 | INFO     | job 6965941561 has completed (purged errors)
[2026-01-11 02:09:03] 2026-01-11 07:08:28,315 | INFO     | overall cleanup function is called
[2026-01-11 02:09:03] 2026-01-11 07:08:29,325 | INFO     | --- collectZombieJob: --- 10, [554018]
[2026-01-11 02:09:03] 2026-01-11 07:08:29,326 | INFO     | zombie collector waiting for pid 554018
[2026-01-11 02:09:03] 2026-01-11 07:08:29,326 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 02:09:03] 2026-01-11 07:08:29,327 | INFO     | collected zombie processes
[2026-01-11 02:09:03] 2026-01-11 07:08:29,327 | INFO     | will attempt to kill all subprocesses of pid=554018
[2026-01-11 02:09:03] 2026-01-11 07:08:30,084 | INFO     | PID=547637 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 02:09:03] 2026-01-11 07:08:30,084 | INFO     | .. there are 15 such processes running
[2026-01-11 02:09:03] 2026-01-11 07:08:30,116 | INFO     | process IDs to be killed: [554018] (in reverse order)
[2026-01-11 02:09:03] 2026-01-11 07:08:30,242 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 02:09:03] 2026-01-11 07:08:30,242 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 02:09:03] 2026-01-11 07:08:30,260 | INFO     | did not find any defunct processes belonging to 554018
[2026-01-11 02:09:03] 2026-01-11 07:08:30,276 | INFO     | did not find any defunct processes belonging to 554018
[2026-01-11 02:09:03] 2026-01-11 07:08:30,277 | INFO     | ready for new job
[2026-01-11 02:09:03] 2026-01-11 07:08:30,277 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 02:09:03] 2026-01-11 07:08:30,279 | INFO     | ***************************************
[2026-01-11 02:09:03] 2026-01-11 07:08:30,279 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 02:09:03] 2026-01-11 07:08:30,279 | INFO     | ***************************************
[2026-01-11 02:09:03] 2026-01-11 07:08:30,279 | INFO     | 
[2026-01-11 02:09:03] 2026-01-11 07:08:30,284 | INFO     | architecture information:
[2026-01-11 02:09:03] 2026-01-11 07:08:30,284 | INFO     | executing command: cat /etc/os-release
[2026-01-11 02:09:03] 2026-01-11 07:08:30,297 | INFO     | cat /etc/os-release:
[2026-01-11 02:09:03] NAME="CentOS Linux"
[2026-01-11 02:09:03] VERSION="7 (Core)"
[2026-01-11 02:09:03] ID="centos"
[2026-01-11 02:09:03] ID_LIKE="rhel fedora"
[2026-01-11 02:09:03] VERSION_ID="7"
[2026-01-11 02:09:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 02:09:03] ANSI_COLOR="0;31"
[2026-01-11 02:09:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 02:09:03] HOME_URL="https://www.centos.org/"
[2026-01-11 02:09:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 02:09:03] 
[2026-01-11 02:09:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 02:09:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 02:09:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 02:09:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 02:09:03] 
[2026-01-11 02:09:03] 2026-01-11 07:08:30,297 | INFO     | ***************************************
[2026-01-11 02:09:03] 2026-01-11 07:08:30,801 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 02:09:03] 2026-01-11 07:08:30,874 | INFO     | sufficient remaining disk space (72653733888 B)
[2026-01-11 02:09:03] 2026-01-11 07:08:30,875 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 02:09:03] 2026-01-11 07:08:30,875 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 02:09:03] 2026-01-11 07:08:30,875 | INFO     | update_server=False
[2026-01-11 02:09:03] 2026-01-11 07:08:30,875 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 02:09:03] 2026-01-11 07:08:30,876 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-11 02:09:03] 2026-01-11 07:08:30,877 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 02:09:03] 2026-01-11 07:08:30,877 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 02:09:03] 2026-01-11 07:08:30,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 02:09:03] 2026-01-11 07:08:30,880 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 02:09:03] 2026-01-11 07:08:31,168 | INFO     | all job control threads have been joined
[2026-01-11 02:09:03] 2026-01-11 07:08:31,335 | INFO     | all data control threads have been joined
[2026-01-11 02:09:03] 2026-01-11 07:08:31,339 | INFO     | all payload control threads have been joined
[2026-01-11 02:09:03] 2026-01-11 07:08:31,871 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 02:09:03] 2026-01-11 07:08:31,871 | INFO     | aborting loop
[2026-01-11 02:09:03] 2026-01-11 07:08:31,882 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 02:09:03] 2026-01-11 07:08:31,884 | INFO     | [job] retrieve thread has finished
[2026-01-11 02:09:03] 2026-01-11 07:08:32,173 | INFO     | [job] control thread has finished
[2026-01-11 02:09:03] 2026-01-11 07:08:32,267 | INFO     | [job] validate thread has finished
[2026-01-11 02:09:03] 2026-01-11 07:08:32,341 | INFO     | [data] control thread has finished
[2026-01-11 02:09:03] 2026-01-11 07:08:32,344 | INFO     | [payload] control thread has finished
[2026-01-11 02:09:03] 2026-01-11 07:08:32,479 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 02:09:03] 2026-01-11 07:08:32,655 | INFO     | [data] copytool_in thread has finished
[2026-01-11 02:09:03] 2026-01-11 07:08:32,723 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 02:09:03] 2026-01-11 07:08:32,876 | INFO     | [job] job monitor thread has finished
[2026-01-11 02:09:03] 2026-01-11 07:08:32,887 | INFO     | [data] copytool_out thread has finished
[2026-01-11 02:09:03] 2026-01-11 07:08:32,888 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 02:09:03] 2026-01-11 07:08:32,892 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 02:09:03] 2026-01-11 07:08:32,938 | INFO     | [payload] validate_post thread has finished
[2026-01-11 02:09:03] 2026-01-11 07:08:33,301 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 02:09:03] 2026-01-11 07:08:33,401 | INFO     | [payload] failed_post thread has finished
[2026-01-11 02:09:03] 2026-01-11 07:08:34,306 | INFO     | [job] queue monitor thread has finished
[2026-01-11 02:09:03] 2026-01-11 07:08:34,686 [wrapper] supervise_pilot (15 min periods counter: 15)
[2026-01-11 02:09:03] 2026-01-11 07:08:36,896 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 02:09:03] 2026-01-11 07:08:57,356 | INFO     | [monitor] cgroup control has ended
[2026-01-11 02:09:03] 2026-01-11 07:08:58,380 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140557694605120)>', '<ExcThread(monitor, started 140556747396864)>']
[2026-01-11 02:09:03] 2026-01-11 07:08:59,032 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 02:09:03] 2026-01-11 07:08:59,032 | INFO     | [monitor] control thread has ended
[2026-01-11 02:09:03] 2026-01-11 07:09:03,406 | INFO     | all workflow threads have been joined
[2026-01-11 02:09:03] 2026-01-11 07:09:03,406 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 02:09:03] 2026-01-11 07:09:03,407 | INFO     | traces error code: 0
[2026-01-11 02:09:03] 2026-01-11 07:09:03,407 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 02:09:03] 2026-01-11 07:09:03,592 [wrapper] ==== pilot stdout END ====
[2026-01-11 02:09:03] 2026-01-11 07:09:03,606 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 02:09:03] 2026-01-11 07:09:03,609 [wrapper] pilotpid: 547637
[2026-01-11 02:09:03] 2026-01-11 07:09:03,612 [wrapper] Pilot exit status: 0
[2026-01-11 02:09:03] 2026-01-11 07:09:03,638 [wrapper] pandaids: 6965941561
[2026-01-11 02:09:03] 2026-01-11 07:09:03,736 [wrapper] cleanup supervisor_pilot 1140769 547638
[2026-01-11 02:09:03] 2026-01-11 07:09:03,762 [wrapper] Test setup, not cleaning
[2026-01-11 02:09:03] 2026-01-11 07:09:03,769 [wrapper] apfmon messages muted
[2026-01-11 02:09:03] 2026-01-11 07:09:03,772 [wrapper] ==== wrapper stdout END ====
[2026-01-11 02:09:03] 2026-01-11 07:09:03,778 [wrapper] ==== wrapper stderr END ====
[2026-01-11 02:09:03]  *** Error codes and diagnostics ***
[2026-01-11 02:09:03]     "exeErrorCode": 0,
[2026-01-11 02:09:03]     "exeErrorDiag": "",
[2026-01-11 02:09:03]     "pilotErrorCode": 0,
[2026-01-11 02:09:03]     "pilotErrorDiag": "",
[2026-01-11 02:09:03]  *** Listing of results directory ***
[2026-01-11 02:09:03] total 1154300
[2026-01-11 02:09:03] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-11 02:09:03] -rwx------. 1 boincer umatlas     36322 Jan 10 22:34 runpilot2-wrapper.sh
[2026-01-11 02:09:03] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 22:35 queuedata.json
[2026-01-11 02:09:03] -rw-r--r--. 1 boincer umatlas       100 Jan 10 22:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 02:09:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 22:38 run_atlas
[2026-01-11 02:09:03] -rw-r--r--. 1 boincer umatlas       105 Jan 10 22:38 job.xml
[2026-01-11 02:09:03] -rw-r--r--. 2 boincer umatlas 916416990 Jan 10 22:38 EVNT.48039248._000054.pool.root.1
[2026-01-11 02:09:03] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:38 start_atlas.sh
[2026-01-11 02:09:03] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 22:38 shared
[2026-01-11 02:09:03] -rw-r--r--. 2 boincer umatlas    592424 Jan 10 22:38 input.tar.gz
[2026-01-11 02:09:03] -rw-r--r--. 1 boincer umatlas         0 Jan 10 22:38 boinc_lockfile
[2026-01-11 02:09:03] -rw-r--r--. 1 boincer umatlas      2592 Jan 10 22:38 pandaJob.out
[2026-01-11 02:09:03] -rw-------. 1 boincer umatlas        57 Jan 10 22:38 setup.sh.local
[2026-01-11 02:09:03] -rw-------. 1 boincer umatlas    989548 Jan 10 22:38 agis_schedconf.cvmfs.json
[2026-01-11 02:09:03] drwx------. 5 boincer umatlas      4096 Jan 10 22:38 pilot3
[2026-01-11 02:09:03] -rw-r--r--. 1 boincer umatlas      6946 Jan 11 02:03 init_data.xml
[2026-01-11 02:09:03] -rw-------. 1 boincer umatlas 257424603 Jan 11 02:07 HITS.48039250._007029.pool.root.1
[2026-01-11 02:09:03] -rw-r--r--. 1 boincer umatlas       531 Jan 11 02:07 boinc_task_state.xml
[2026-01-11 02:09:03] -rw-------. 1 boincer umatlas        95 Jan 11 02:07 pilot_heartbeat.json
[2026-01-11 02:09:03] -rw-------. 1 boincer umatlas      1033 Jan 11 02:08 memory_monitor_summary.json
[2026-01-11 02:09:03] -rw-------. 1 boincer umatlas   1516240 Jan 11 02:08 agis_ddmendpoints.agis.ALL.json
[2026-01-11 02:09:03] -rw-------. 1 boincer umatlas    442219 Jan 11 02:08 log.48039250._007029.job.log.tgz.1
[2026-01-11 02:09:03] -rw-------. 1 boincer umatlas      7768 Jan 11 02:08 heartbeat.json
[2026-01-11 02:09:03] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 02:09 boinc_mmap_file
[2026-01-11 02:09:03] -rw-r--r--. 1 boincer umatlas        28 Jan 11 02:09 wrapper_checkpoint.txt
[2026-01-11 02:09:03] -rw-------. 1 boincer umatlas      4552 Jan 11 02:09 pilotlog.txt
[2026-01-11 02:09:03] -rw-------. 1 boincer umatlas   1679520 Jan 11 02:09 log.48039250._007029.job.log.1
[2026-01-11 02:09:03] -rw-------. 1 boincer umatlas       357 Jan 11 02:09 output.list
[2026-01-11 02:09:03] -rw-r--r--. 1 boincer umatlas       620 Jan 11 02:09 runtime_log
[2026-01-11 02:09:03] -rw-------. 1 boincer umatlas   2140160 Jan 11 02:09 result.tar.gz
[2026-01-11 02:09:03] -rw-r--r--. 1 boincer umatlas      9338 Jan 11 02:09 runtime_log.err
[2026-01-11 02:09:03] -rw-------. 1 boincer umatlas       658 Jan 11 02:09 pFzMDmoO1y8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSihKDmQ1VoTm.diag
[2026-01-11 02:09:03] -rw-r--r--. 1 boincer umatlas     21389 Jan 11 02:09 stderr.txt
[2026-01-11 02:09:04] HITS file was successfully produced:
[2026-01-11 02:09:04] -rw-------. 1 boincer umatlas 257424603 Jan 11 02:07 shared/HITS.pool.root.1
[2026-01-11 02:09:04]  *** Contents of shared directory: ***
[2026-01-11 02:09:04] total 1149028
[2026-01-11 02:09:04] -rw-r--r--. 2 boincer umatlas 916416990 Jan 10 22:38 ATLAS.root_0
[2026-01-11 02:09:04] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:38 start_atlas.sh
[2026-01-11 02:09:04] -rw-r--r--. 2 boincer umatlas    592424 Jan 10 22:38 input.tar.gz
[2026-01-11 02:09:04] -rw-------. 1 boincer umatlas 257424603 Jan 11 02:07 HITS.pool.root.1
[2026-01-11 02:09:04] -rw-------. 1 boincer umatlas   2140160 Jan 11 02:09 result.tar.gz
02:09:05 (543953): run_atlas exited; CPU time 45037.063283
02:09:05 (543953): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN