Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:04:23 (142000): wrapper (7.7.26015): starting
23:04:23 (142000): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 23:04:24] Arguments: --nthreads 8
[2026-01-10 23:04:24] Threads: 8
[2026-01-10 23:04:24] Checking for CVMFS
[2026-01-10 23:04:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 23:04:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 23:04:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 23:04:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 23:04:24] 2.13.3.0 16090 95738 417996 155002 1 862 30337971 32935937 36978 16776704 0 1026145022 99.551 1183186410 52171 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 23:04:24] CVMFS is ok
[2026-01-10 23:04:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 23:04:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 23:04:24] Further information can be found at the LHC@home message board.
[2026-01-10 23:04:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 23:04:24] Checking for apptainer binary...
[2026-01-10 23:04:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 23:04:24] Running /usr/bin/apptainer --version
[2026-01-10 23:04:24] apptainer version 1.4.5-2.el9
[2026-01-10 23:04:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 23:04:24] c7-9-15.aglt2.org
[2026-01-10 23:04:24] apptainer works
[2026-01-10 23:04:24] Set ATHENA_PROC_NUMBER=8
[2026-01-10 23:04:24] Set ATHENA_CORE_NUMBER=8
[2026-01-10 23:04:24] Starting ATLAS job with PandaID=6965941524
[2026-01-10 23:04:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 00:27:09]  *** The last 200 lines of the pilot log: ***
[2026-01-11 00:27:09]  status_code=0
[2026-01-11 00:27:09]  storage_token=
[2026-01-11 00:27:09]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6965941524/log.48039250._006992.job.log.tgz.1
[2026-01-11 00:27:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/48/log.48039250._006992.job.log.tgz.1
[2026-01-11 00:27:09]  workdir=None
[2026-01-11 00:27:09] ]
[2026-01-11 00:27:09] 2026-01-11 05:26:27,357 | INFO     | transferring file log.48039250._006992.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6965941524/log.48039250._006992.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-11 00:27:09] 2026-01-11 05:26:27,357 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6965941524/log.48039250._006992.job.log.tgz.1 /tmp/boinchome/slots/5/log.48039250._006992.job
[2026-01-11 00:27:09] 2026-01-11 05:26:27,381 | INFO     | adding to output.list: log.48039250._006992.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/48/log.48039250._006992.job.log.tg
[2026-01-11 00:27:09] 2026-01-11 05:26:27,383 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 00:27:09] 2026-01-11 05:26:27,383 | INFO     | summary of transferred files:
[2026-01-11 00:27:09] 2026-01-11 05:26:27,383 | INFO     |  -- lfn=log.48039250._006992.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 00:27:09] 2026-01-11 05:26:27,383 | INFO     | stage-out finished correctly
[2026-01-11 00:27:09] 2026-01-11 05:26:27,434 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 00:27:09] 2026-01-11 05:26:27,481 | INFO     | job 6965941524 has state=finished
[2026-01-11 00:27:09] 2026-01-11 05:26:27,482 | INFO     | preparing for final server update for job 6965941524 in state='finished'
[2026-01-11 00:27:09] 2026-01-11 05:26:27,482 | INFO     | this job has now completed (state=finished)
[2026-01-11 00:27:09] 2026-01-11 05:26:27,482 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 00:27:09] 2026-01-11 05:26:27,482 | INFO     | log transfer has been attempted: DONE
[2026-01-11 00:27:09] 2026-01-11 05:26:27,482 | INFO     | job 6965941524 has finished - writing final server update
[2026-01-11 00:27:09] 2026-01-11 05:26:27,482 | INFO     | total number of processed events: 400 (read)
[2026-01-11 00:27:09] 2026-01-11 05:26:27,488 | INFO     | executing command: lscpu
[2026-01-11 00:27:09] 2026-01-11 05:26:27,551 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 00:27:09] 2026-01-11 05:26:28,621 | INFO     | PID=145910 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 00:27:09] 2026-01-11 05:26:28,623 | INFO     | .. there are 39 such processes running
[2026-01-11 00:27:09] 2026-01-11 05:26:28,727 | INFO     | monitor loop #342: job 0:6965941524 is in state 'finished'
[2026-01-11 00:27:09] 2026-01-11 05:26:28,727 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 00:27:09] 2026-01-11 05:26:29,624 | INFO     | time since job start (4906s) is within the limit (349056.0s)
[2026-01-11 00:27:09] 2026-01-11 05:26:31,231 | INFO     | monitor loop #343: job 0:6965941524 is in state 'finished'
[2026-01-11 00:27:09] 2026-01-11 05:26:31,231 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 00:27:09] 2026-01-11 05:26:31,633 | INFO     | time since job start (4908s) is within the limit (349056.0s)
[2026-01-11 00:27:09] 2026-01-11 05:26:33,640 | INFO     | time since job start (4910s) is within the limit (349056.0s)
[2026-01-11 00:27:09] 2026-01-11 05:26:33,734 | INFO     | monitor loop #344: job 0:6965941524 is in state 'finished'
[2026-01-11 00:27:09] 2026-01-11 05:26:33,734 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 00:27:09] 2026-01-11 05:26:35,647 | INFO     | time since job start (4912s) is within the limit (349056.0s)
[2026-01-11 00:27:09] 2026-01-11 05:26:36,021 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 00:27:09] 2026-01-11 05:26:36,026 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.1857265625
[2026-01-11 00:27:09] 2026-01-11 05:26:36,038 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6965941524/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 00:27:09] 2026-01-11 05:26:36,038 | INFO     | extracted standard info from prmon json
[2026-01-11 00:27:09] 2026-01-11 05:26:36,039 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 00:27:09] 2026-01-11 05:26:36,039 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 00:27:09] 2026-01-11 05:26:36,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 00:27:09] 2026-01-11 05:26:36,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 00:27:09] 2026-01-11 05:26:36,040 | INFO     | fitting pss+swap vs Time
[2026-01-11 00:27:09] 2026-01-11 05:26:36,040 | INFO     | sum of square deviations: 120605052.0
[2026-01-11 00:27:09] 2026-01-11 05:26:36,040 | INFO     | sum of deviations: 545432781.0000001
[2026-01-11 00:27:09] 2026-01-11 05:26:36,040 | INFO     | mean x: 1768106822.0
[2026-01-11 00:27:09] 2026-01-11 05:26:36,040 | INFO     | mean y: 2552495.109589041
[2026-01-11 00:27:09] 2026-01-11 05:26:36,040 | INFO     | intersect: -7993658318.916114
[2026-01-11 00:27:09] 2026-01-11 05:26:36,040 | INFO     | chi2: 0.0008220983078171097
[2026-01-11 00:27:09] 2026-01-11 05:26:36,040 | INFO     | current memory leak: 4.52 B/s (using 73 data points, chi2=0.00)
[2026-01-11 00:27:09] 2026-01-11 05:26:36,040 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2026-01-11 00:27:09] 2026-01-11 05:26:36,040 | INFO     | ..............................
[2026-01-11 00:27:09] 2026-01-11 05:26:36,041 | INFO     | . Timing measurements:
[2026-01-11 00:27:09] 2026-01-11 05:26:36,041 | INFO     | . get job = 0 s
[2026-01-11 00:27:09] 2026-01-11 05:26:36,041 | INFO     | . initial setup = 3 s
[2026-01-11 00:27:09] 2026-01-11 05:26:36,041 | INFO     | . payload setup = 12 s
[2026-01-11 00:27:09] 2026-01-11 05:26:36,041 | INFO     | . stage-in = 0 s
[2026-01-11 00:27:09] 2026-01-11 05:26:36,041 | INFO     | . payload execution = 4868 s
[2026-01-11 00:27:09] 2026-01-11 05:26:36,041 | INFO     | . stage-out = 0 s
[2026-01-11 00:27:09] 2026-01-11 05:26:36,041 | INFO     | . log creation = 0 s
[2026-01-11 00:27:09] 2026-01-11 05:26:36,041 | INFO     | ..............................
[2026-01-11 00:27:09] 2026-01-11 05:26:36,089 | INFO     | 
[2026-01-11 00:27:09] 2026-01-11 05:26:36,089 | INFO     | job summary report
[2026-01-11 00:27:09] 2026-01-11 05:26:36,089 | INFO     | --------------------------------------------------
[2026-01-11 00:27:09] 2026-01-11 05:26:36,089 | INFO     | PanDA job id: 6965941524
[2026-01-11 00:27:09] 2026-01-11 05:26:36,089 | INFO     | task id: 48039250
[2026-01-11 00:27:09] 2026-01-11 05:26:36,089 | INFO     | errors: (none)
[2026-01-11 00:27:09] 2026-01-11 05:26:36,089 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 00:27:09] 2026-01-11 05:26:36,089 | INFO     | pilot state: finished 
[2026-01-11 00:27:09] 2026-01-11 05:26:36,089 | INFO     | transexitcode: 0
[2026-01-11 00:27:09] 2026-01-11 05:26:36,089 | INFO     | exeerrorcode: 0
[2026-01-11 00:27:09] 2026-01-11 05:26:36,089 | INFO     | exeerrordiag: 
[2026-01-11 00:27:09] 2026-01-11 05:26:36,089 | INFO     | exitcode: 0
[2026-01-11 00:27:09] 2026-01-11 05:26:36,090 | INFO     | exitmsg: OK
[2026-01-11 00:27:09] 2026-01-11 05:26:36,090 | INFO     | cpuconsumptiontime: 31680 s
[2026-01-11 00:27:09] 2026-01-11 05:26:36,090 | INFO     | nevents: 400
[2026-01-11 00:27:09] 2026-01-11 05:26:36,090 | INFO     | neventsw: 0
[2026-01-11 00:27:09] 2026-01-11 05:26:36,090 | INFO     | pid: 153313
[2026-01-11 00:27:09] 2026-01-11 05:26:36,090 | INFO     | pgrp: 153313
[2026-01-11 00:27:09] 2026-01-11 05:26:36,090 | INFO     | corecount: 8
[2026-01-11 00:27:09] 2026-01-11 05:26:36,090 | INFO     | event service: False
[2026-01-11 00:27:09] 2026-01-11 05:26:36,090 | INFO     | sizes: {0: 2284028, 9: 2284290, 11: 2284318, 4884: 2310678, 4885: 2319676, 4886: 2319732, 4894: 2320054}
[2026-01-11 00:27:09] 2026-01-11 05:26:36,090 | INFO     | --------------------------------------------------
[2026-01-11 00:27:09] 2026-01-11 05:26:36,090 | INFO     | 
[2026-01-11 00:27:09] 2026-01-11 05:26:36,090 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-11 00:27:09] 2026-01-11 05:26:36,105 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 00:27:09] 2026-01-11 05:26:36,105 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 00:27:09] 2026-01-11 05:26:36,105 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 00:27:09] 2026-01-11 05:26:36,105 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 00:27:09] 2026-01-11 05:26:36,105 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 00:27:09] 2026-01-11 05:26:36,105 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 00:27:09] 2026-01-11 05:26:36,105 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 00:27:09] 2026-01-11 05:26:36,105 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 00:27:09] 2026-01-11 05:26:36,105 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 00:27:09] 2026-01-11 05:26:36,105 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 00:27:09] 2026-01-11 05:26:36,105 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 00:27:09] 2026-01-11 05:26:36,105 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 00:27:09] 2026-01-11 05:26:36,105 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 00:27:09] 2026-01-11 05:26:36,105 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 00:27:09] 2026-01-11 05:26:36,105 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 00:27:09] 2026-01-11 05:26:36,105 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 00:27:09] 2026-01-11 05:26:36,105 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 00:27:09] 2026-01-11 05:26:36,105 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 00:27:09] 2026-01-11 05:26:36,106 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 00:27:09] 2026-01-11 05:26:36,106 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 00:27:09] 2026-01-11 05:26:36,106 | INFO     | job 6965941524 has completed (purged errors)
[2026-01-11 00:27:09] 2026-01-11 05:26:36,106 | INFO     | overall cleanup function is called
[2026-01-11 00:27:09] 2026-01-11 05:26:37,113 | INFO     | --- collectZombieJob: --- 10, [153313]
[2026-01-11 00:27:09] 2026-01-11 05:26:37,113 | INFO     | zombie collector waiting for pid 153313
[2026-01-11 00:27:09] 2026-01-11 05:26:37,114 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 00:27:09] 2026-01-11 05:26:37,114 | INFO     | collected zombie processes
[2026-01-11 00:27:09] 2026-01-11 05:26:37,114 | INFO     | will attempt to kill all subprocesses of pid=153313
[2026-01-11 00:27:09] 2026-01-11 05:26:37,558 | INFO     | process IDs to be killed: [153313] (in reverse order)
[2026-01-11 00:27:09] 2026-01-11 05:26:37,692 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 00:27:09] 2026-01-11 05:26:37,692 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 00:27:09] 2026-01-11 05:26:37,712 | INFO     | did not find any defunct processes belonging to 153313
[2026-01-11 00:27:09] 2026-01-11 05:26:37,731 | INFO     | did not find any defunct processes belonging to 153313
[2026-01-11 00:27:09] 2026-01-11 05:26:37,731 | INFO     | ready for new job
[2026-01-11 00:27:09] 2026-01-11 05:26:37,731 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 00:27:09] 2026-01-11 05:26:37,732 | INFO     | ***************************************
[2026-01-11 00:27:09] 2026-01-11 05:26:37,732 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 00:27:09] 2026-01-11 05:26:37,732 | INFO     | ***************************************
[2026-01-11 00:27:09] 2026-01-11 05:26:37,732 | INFO     | 
[2026-01-11 00:27:09] 2026-01-11 05:26:37,737 | INFO     | architecture information:
[2026-01-11 00:27:09] 2026-01-11 05:26:37,737 | INFO     | executing command: cat /etc/os-release
[2026-01-11 00:27:09] 2026-01-11 05:26:37,753 | INFO     | cat /etc/os-release:
[2026-01-11 00:27:09] NAME="CentOS Linux"
[2026-01-11 00:27:09] VERSION="7 (Core)"
[2026-01-11 00:27:09] ID="centos"
[2026-01-11 00:27:09] ID_LIKE="rhel fedora"
[2026-01-11 00:27:09] VERSION_ID="7"
[2026-01-11 00:27:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 00:27:09] ANSI_COLOR="0;31"
[2026-01-11 00:27:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 00:27:09] HOME_URL="https://www.centos.org/"
[2026-01-11 00:27:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 00:27:09] 
[2026-01-11 00:27:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 00:27:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 00:27:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 00:27:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 00:27:09] 
[2026-01-11 00:27:09] 2026-01-11 05:26:37,753 | INFO     | ***************************************
[2026-01-11 00:27:09] 2026-01-11 05:26:38,256 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-11 00:27:09] 2026-01-11 05:26:38,289 | INFO     | sufficient remaining disk space (67361570816 B)
[2026-01-11 00:27:09] 2026-01-11 05:26:38,289 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 00:27:09] 2026-01-11 05:26:38,289 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 00:27:09] 2026-01-11 05:26:38,289 | INFO     | update_server=False
[2026-01-11 00:27:09] 2026-01-11 05:26:38,289 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 00:27:09] 2026-01-11 05:26:38,289 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 00:27:09] 2026-01-11 05:26:38,290 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 00:27:09] 2026-01-11 05:26:38,621 | INFO     | all payload control threads have been joined
[2026-01-11 00:27:09] 2026-01-11 05:26:38,753 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 00:27:09] 2026-01-11 05:26:38,753 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 00:27:09] 2026-01-11 05:26:38,753 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 00:27:09] 2026-01-11 05:26:38,753 | INFO     | will abort loop
[2026-01-11 00:27:09] 2026-01-11 05:26:38,851 | INFO     | all job control threads have been joined
[2026-01-11 00:27:09] 2026-01-11 05:26:39,295 | INFO     | [job] retrieve thread has finished
[2026-01-11 00:27:09] 2026-01-11 05:26:39,353 | INFO     | all data control threads have been joined
[2026-01-11 00:27:09] 2026-01-11 05:26:39,443 | INFO     | [job] validate thread has finished
[2026-01-11 00:27:09] 2026-01-11 05:26:39,610 | INFO     | [data] copytool_in thread has finished
[2026-01-11 00:27:09] 2026-01-11 05:26:39,627 | INFO     | [payload] control thread has finished
[2026-01-11 00:27:09] 2026-01-11 05:26:39,763 | INFO     | [job] job monitor thread has finished
[2026-01-11 00:27:09] 2026-01-11 05:26:39,795 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 00:27:09] 2026-01-11 05:26:39,857 | INFO     | [job] control thread has finished
[2026-01-11 00:27:09] 2026-01-11 05:26:40,017 | INFO     | [payload] validate_post thread has finished
[2026-01-11 00:27:09] 2026-01-11 05:26:40,074 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 00:27:09] 2026-01-11 05:26:40,296 | INFO     | [data] copytool_out thread has finished
[2026-01-11 00:27:09] 2026-01-11 05:26:40,360 | INFO     | [data] control thread has finished
[2026-01-11 00:27:09] 2026-01-11 05:26:40,624 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 00:27:09] 2026-01-11 05:26:40,656 | INFO     | [payload] failed_post thread has finished
[2026-01-11 00:27:09] 2026-01-11 05:26:41,107 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 00:27:09] 2026-01-11 05:26:42,112 | INFO     | [job] queue monitor thread has finished
[2026-01-11 00:27:09] 2026-01-11 05:26:42,299 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 00:27:09] 2026-01-11 05:26:48,932 | INFO     | job.realtimelogging is not enabled
[2026-01-11 00:27:09] 2026-01-11 05:26:49,945 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 00:27:09] 2026-01-11 05:26:50,693 | INFO     | [monitor] cgroup control has ended
[2026-01-11 00:27:09] 2026-01-11 05:26:51,267 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139703867270976)>', '<ExcThread(monitor, started 139702929712896)>']
[2026-01-11 00:27:09] 2026-01-11 05:26:56,292 | INFO     | all workflow threads have been joined
[2026-01-11 00:27:09] 2026-01-11 05:26:56,294 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 00:27:09] 2026-01-11 05:26:56,294 | INFO     | traces error code: 0
[2026-01-11 00:27:09] 2026-01-11 05:26:56,295 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 00:27:09] 2026-01-11 05:27:09,161 | INFO     | PID=145910 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 00:27:09] 2026-01-11 05:27:09,162 | INFO     | .. there are 39 such processes running
[2026-01-11 00:27:09] 2026-01-11 05:27:09,162 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 00:27:09] 2026-01-11 05:27:09,163 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 00:27:09] 2026-01-11 05:27:09,163 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 00:27:09] 2026-01-11 05:27:09,163 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 00:27:09] 2026-01-11 05:27:09,163 | INFO     | [monitor] control thread has ended
[2026-01-11 00:27:09] 2026-01-11 05:27:09,279 [wrapper] ==== pilot stdout END ====
[2026-01-11 00:27:09] 2026-01-11 05:27:09,281 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 00:27:09] 2026-01-11 05:27:09,285 [wrapper] pilotpid: 145910
[2026-01-11 00:27:09] 2026-01-11 05:27:09,288 [wrapper] Pilot exit status: 0
[2026-01-11 00:27:09] 2026-01-11 05:27:09,296 [wrapper] pandaids: 6965941524
[2026-01-11 00:27:09] 2026-01-11 05:27:09,393 [wrapper] cleanup supervisor_pilot  518643 145911
[2026-01-11 00:27:09] 2026-01-11 05:27:09,397 [wrapper] Test setup, not cleaning
[2026-01-11 00:27:09] 2026-01-11 05:27:09,400 [wrapper] apfmon messages muted
[2026-01-11 00:27:09] 2026-01-11 05:27:09,410 [wrapper] ==== wrapper stdout END ====
[2026-01-11 00:27:09] 2026-01-11 05:27:09,420 [wrapper] ==== wrapper stderr END ====
[2026-01-11 00:27:09]  *** Error codes and diagnostics ***
[2026-01-11 00:27:09]     "exeErrorCode": 0,
[2026-01-11 00:27:09]     "exeErrorDiag": "",
[2026-01-11 00:27:09]     "pilotErrorCode": 0,
[2026-01-11 00:27:09]     "pilotErrorDiag": "",
[2026-01-11 00:27:09]  *** Listing of results directory ***
[2026-01-11 00:27:09] total 1153064
[2026-01-11 00:27:09] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-11 00:27:09] -rwx------. 1 boincer umatlas     36322 Jan 10 22:34 runpilot2-wrapper.sh
[2026-01-11 00:27:09] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 22:35 queuedata.json
[2026-01-11 00:27:09] -rw-r--r--. 1 boincer umatlas       100 Jan 10 23:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 00:27:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 23:04 run_atlas
[2026-01-11 00:27:09] -rw-r--r--. 1 boincer umatlas       105 Jan 10 23:04 job.xml
[2026-01-11 00:27:09] -rw-r--r--. 2 boincer umatlas 916354918 Jan 10 23:04 EVNT.48039248._000058.pool.root.1
[2026-01-11 00:27:09] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 23:04 start_atlas.sh
[2026-01-11 00:27:09] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 23:04 shared
[2026-01-11 00:27:09] -rw-r--r--. 2 boincer umatlas    592418 Jan 10 23:04 input.tar.gz
[2026-01-11 00:27:09] -rw-r--r--. 1 boincer umatlas         0 Jan 10 23:04 boinc_lockfile
[2026-01-11 00:27:09] -rw-r--r--. 1 boincer umatlas      2593 Jan 10 23:04 pandaJob.out
[2026-01-11 00:27:09] -rw-------. 1 boincer umatlas        57 Jan 10 23:04 setup.sh.local
[2026-01-11 00:27:09] -rw-------. 1 boincer umatlas    989548 Jan 10 23:04 agis_schedconf.cvmfs.json
[2026-01-11 00:27:09] -rw-------. 1 boincer umatlas   1516240 Jan 10 23:04 agis_ddmendpoints.agis.ALL.json
[2026-01-11 00:27:09] drwx------. 5 boincer umatlas      4096 Jan 10 23:04 pilot3
[2026-01-11 00:27:09] -rw-r--r--. 1 boincer umatlas      7171 Jan 11 00:19 init_data.xml
[2026-01-11 00:27:09] -rw-------. 1 boincer umatlas 258354802 Jan 11 00:25 HITS.48039250._006992.pool.root.1
[2026-01-11 00:27:09] -rw-r--r--. 1 boincer umatlas       530 Jan 11 00:26 boinc_task_state.xml
[2026-01-11 00:27:09] -rw-------. 1 boincer umatlas      1030 Jan 11 00:26 memory_monitor_summary.json
[2026-01-11 00:27:09] -rw-------. 1 boincer umatlas    346345 Jan 11 00:26 log.48039250._006992.job.log.tgz.1
[2026-01-11 00:27:09] -rw-------. 1 boincer umatlas      7768 Jan 11 00:26 heartbeat.json
[2026-01-11 00:27:09] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 00:27 boinc_mmap_file
[2026-01-11 00:27:09] -rw-r--r--. 1 boincer umatlas        27 Jan 11 00:27 wrapper_checkpoint.txt
[2026-01-11 00:27:09] -rw-------. 1 boincer umatlas       822 Jan 11 00:27 pilotlog.txt
[2026-01-11 00:27:09] -rw-------. 1 boincer umatlas        95 Jan 11 00:27 pilot_heartbeat.json
[2026-01-11 00:27:09] -rw-------. 1 boincer umatlas    709609 Jan 11 00:27 log.48039250._006992.job.log.1
[2026-01-11 00:27:09] -rw-------. 1 boincer umatlas       357 Jan 11 00:27 output.list
[2026-01-11 00:27:09] -rw-r--r--. 1 boincer umatlas       620 Jan 11 00:27 runtime_log
[2026-01-11 00:27:09] -rw-------. 1 boincer umatlas   1075200 Jan 11 00:27 result.tar.gz
[2026-01-11 00:27:09] -rw-r--r--. 1 boincer umatlas      9337 Jan 11 00:27 runtime_log.err
[2026-01-11 00:27:09] -rw-------. 1 boincer umatlas       651 Jan 11 00:27 0YlLDmoO1y8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwhhKDmusq5an.diag
[2026-01-11 00:27:09] -rw-r--r--. 1 boincer umatlas     22191 Jan 11 00:27 stderr.txt
[2026-01-11 00:27:09] HITS file was successfully produced:
[2026-01-11 00:27:09] -rw-------. 1 boincer umatlas 258354802 Jan 11 00:25 shared/HITS.pool.root.1
[2026-01-11 00:27:09]  *** Contents of shared directory: ***
[2026-01-11 00:27:09] total 1148836
[2026-01-11 00:27:09] -rw-r--r--. 2 boincer umatlas 916354918 Jan 10 23:04 ATLAS.root_0
[2026-01-11 00:27:09] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 23:04 start_atlas.sh
[2026-01-11 00:27:09] -rw-r--r--. 2 boincer umatlas    592418 Jan 10 23:04 input.tar.gz
[2026-01-11 00:27:09] -rw-------. 1 boincer umatlas 258354802 Jan 11 00:25 HITS.pool.root.1
[2026-01-11 00:27:09] -rw-------. 1 boincer umatlas   1075200 Jan 11 00:27 result.tar.gz
00:27:10 (142000): run_atlas exited; CPU time 31783.516841
00:27:10 (142000): called boinc_finish(0)

</stderr_txt>
]]>

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