Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:49:57 (128672): wrapper (7.7.26015): starting
23:49:57 (128672): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 23:49:57] Arguments: --nthreads 8
[2026-01-10 23:49:57] Threads: 8
[2026-01-10 23:49:57] Checking for CVMFS
[2026-01-10 23:49:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 23:49:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 23:49:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 23:49:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 23:49:59] 2.13.3.0 7268 25305 207100 155004 2 372 39000407 40960001 27572 16776704 0 63827970 99.658 58455964 39091 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 23:49:59] CVMFS is ok
[2026-01-10 23:49:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 23:49:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 23:49:59] Further information can be found at the LHC@home message board.
[2026-01-10 23:49:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 23:49:59] Checking for apptainer binary...
[2026-01-10 23:49:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 23:49:59] Running /usr/bin/apptainer --version
[2026-01-10 23:49:59] apptainer version 1.4.5-2.el9
[2026-01-10 23:49:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 23:49:59] c-212-18.aglt2.org
[2026-01-10 23:49:59] apptainer works
[2026-01-10 23:50:00] Set ATHENA_PROC_NUMBER=8
[2026-01-10 23:50:00] Set ATHENA_CORE_NUMBER=8
[2026-01-10 23:50:00] Starting ATLAS job with PandaID=6965941512
[2026-01-10 23:50:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 03:15:13]  *** The last 200 lines of the pilot log: ***
[2026-01-11 03:15:13] 2026-01-11 08:14:28,301 | INFO     | monitor loop #792: job 0:6965941512 is in state 'finished'
[2026-01-11 03:15:13] 2026-01-11 08:14:28,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:15:13] 2026-01-11 08:14:30,303 | INFO     | time since job start (12223s) is within the limit (349056.0s)
[2026-01-11 03:15:13] 2026-01-11 08:14:30,805 | INFO     | monitor loop #793: job 0:6965941512 is in state 'finished'
[2026-01-11 03:15:13] 2026-01-11 08:14:30,805 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:15:13] 2026-01-11 08:14:32,310 | INFO     | time since job start (12225s) is within the limit (349056.0s)
[2026-01-11 03:15:13] 2026-01-11 08:14:33,206 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 03:15:13] 2026-01-11 08:14:33,217 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3341.6283541666658
[2026-01-11 03:15:13] 2026-01-11 08:14:33,238 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6965941512/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 03:15:13] 2026-01-11 08:14:33,239 | INFO     | extracted standard info from prmon json
[2026-01-11 03:15:13] 2026-01-11 08:14:33,239 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 03:15:13] 2026-01-11 08:14:33,239 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 03:15:13] 2026-01-11 08:14:33,239 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 03:15:13] 2026-01-11 08:14:33,239 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 03:15:13] 2026-01-11 08:14:33,263 | INFO     | fitting pss+swap vs Time
[2026-01-11 03:15:13] 2026-01-11 08:14:33,264 | INFO     | sum of square deviations: 2443499945.497476
[2026-01-11 03:15:13] 2026-01-11 08:14:33,265 | INFO     | sum of deviations: 45570400304.673325
[2026-01-11 03:15:13] 2026-01-11 08:14:33,265 | INFO     | mean x: 1768113189.0502512
[2026-01-11 03:15:13] 2026-01-11 08:14:33,265 | INFO     | mean y: 2503234.5326633165
[2026-01-11 03:15:13] 2026-01-11 08:14:33,265 | INFO     | intersect: -32972175548.440823
[2026-01-11 03:15:13] 2026-01-11 08:14:33,265 | INFO     | chi2: 3.81668150373525
[2026-01-11 03:15:13] 2026-01-11 08:14:33,265 | INFO     | sum of square deviations: 2263899627.9845266
[2026-01-11 03:15:13] 2026-01-11 08:14:33,266 | INFO     | sum of deviations: 58511900245.28354
[2026-01-11 03:15:13] 2026-01-11 08:14:33,266 | INFO     | mean x: 1768113036.5515463
[2026-01-11 03:15:13] 2026-01-11 08:14:33,266 | INFO     | mean y: 2513975.2216494847
[2026-01-11 03:15:13] 2026-01-11 08:14:33,266 | INFO     | intersect: -45695472074.271416
[2026-01-11 03:15:13] 2026-01-11 08:14:33,267 | INFO     | chi2: 2.9644635797896393
[2026-01-11 03:15:13] 2026-01-11 08:14:33,278 | INFO     | current chi2=2.9644635797896393 (change=22.328767100728093 %)
[2026-01-11 03:15:13] 2026-01-11 08:14:33,278 | INFO     | right removable region: 193
[2026-01-11 03:15:13] 2026-01-11 08:14:33,278 | INFO     | sum of square deviations: 2263893527.9845266
[2026-01-11 03:15:13] 2026-01-11 08:14:33,279 | INFO     | sum of deviations: -8155044467.298972
[2026-01-11 03:15:13] 2026-01-11 08:14:33,279 | INFO     | mean x: 1768113341.5515463
[2026-01-11 03:15:13] 2026-01-11 08:14:33,279 | INFO     | mean y: 2548693.3298969073
[2026-01-11 03:15:13] 2026-01-11 08:14:33,279 | INFO     | intersect: 6371683436.346834
[2026-01-11 03:15:13] 2026-01-11 08:14:33,280 | INFO     | chi2: 1.0395348657241616
[2026-01-11 03:15:13] 2026-01-11 08:14:33,280 | INFO     | current chi2=1.0395348657241616 (change=72.7633845080653 %)
[2026-01-11 03:15:13] 2026-01-11 08:14:33,280 | INFO     | sum of square deviations: 2093310535.4709048
[2026-01-11 03:15:13] 2026-01-11 08:14:33,281 | INFO     | sum of deviations: -12366699316.830688
[2026-01-11 03:15:13] 2026-01-11 08:14:33,281 | INFO     | mean x: 1768113494.05291
[2026-01-11 03:15:13] 2026-01-11 08:14:33,281 | INFO     | mean y: 2552396.783068783
[2026-01-11 03:15:13] 2026-01-11 08:14:33,281 | INFO     | intersect: 10448077591.669836
[2026-01-11 03:15:13] 2026-01-11 08:14:33,281 | INFO     | chi2: 0.9978148142825144
[2026-01-11 03:15:13] 2026-01-11 08:14:33,281 | INFO     | current chi2=0.9978148142825144 (change=4.013338351338913 %)
[2026-01-11 03:15:13] 2026-01-11 08:14:33,281 | INFO     | left removable region: 20
[2026-01-11 03:15:13] 2026-01-11 08:14:33,281 | INFO     | sum of square deviations: 1605413622.716764
[2026-01-11 03:15:13] 2026-01-11 08:14:33,301 | INFO     | sum of deviations: 9570346465.167633
[2026-01-11 03:15:13] 2026-01-11 08:14:33,302 | INFO     | mean x: 1768113616.0404625
[2026-01-11 03:15:13] 2026-01-11 08:14:33,302 | INFO     | mean y: 2556769.4046242773
[2026-01-11 03:15:13] 2026-01-11 08:14:33,302 | INFO     | intersect: -10537692581.820036
[2026-01-11 03:15:13] 2026-01-11 08:14:33,302 | INFO     | chi2: 0.005863371234963418
[2026-01-11 03:15:13] 2026-01-11 08:14:33,302 | INFO     | current memory leak: 5.96 B/s (using 173 data points, chi2=0.01)
[2026-01-11 03:15:13] 2026-01-11 08:14:33,303 | INFO     | could have reported an average CPU frequency of 3307 MHz (10 samples)
[2026-01-11 03:15:13] 2026-01-11 08:14:33,303 | INFO     | ..............................
[2026-01-11 03:15:13] 2026-01-11 08:14:33,303 | INFO     | . Timing measurements:
[2026-01-11 03:15:13] 2026-01-11 08:14:33,303 | INFO     | . get job = 0 s
[2026-01-11 03:15:13] 2026-01-11 08:14:33,303 | INFO     | . initial setup = 6 s
[2026-01-11 03:15:13] 2026-01-11 08:14:33,303 | INFO     | . payload setup = 35 s
[2026-01-11 03:15:13] 2026-01-11 08:14:33,303 | INFO     | . stage-in = 0 s
[2026-01-11 03:15:13] 2026-01-11 08:14:33,303 | INFO     | . payload execution = 12127 s
[2026-01-11 03:15:13] 2026-01-11 08:14:33,303 | INFO     | . stage-out = 2 s
[2026-01-11 03:15:13] 2026-01-11 08:14:33,303 | INFO     | . log creation = 0 s
[2026-01-11 03:15:13] 2026-01-11 08:14:33,303 | INFO     | ..............................
[2026-01-11 03:15:13] 2026-01-11 08:14:33,373 | INFO     | 
[2026-01-11 03:15:13] 2026-01-11 08:14:33,374 | INFO     | job summary report
[2026-01-11 03:15:13] 2026-01-11 08:14:33,374 | INFO     | --------------------------------------------------
[2026-01-11 03:15:13] 2026-01-11 08:14:33,374 | INFO     | PanDA job id: 6965941512
[2026-01-11 03:15:13] 2026-01-11 08:14:33,374 | INFO     | task id: 48039250
[2026-01-11 03:15:13] 2026-01-11 08:14:33,374 | INFO     | errors: (none)
[2026-01-11 03:15:13] 2026-01-11 08:14:33,374 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 03:15:13] 2026-01-11 08:14:33,374 | INFO     | pilot state: finished 
[2026-01-11 03:15:13] 2026-01-11 08:14:33,374 | INFO     | transexitcode: 0
[2026-01-11 03:15:13] 2026-01-11 08:14:33,374 | INFO     | exeerrorcode: 0
[2026-01-11 03:15:13] 2026-01-11 08:14:33,375 | INFO     | exeerrordiag: 
[2026-01-11 03:15:13] 2026-01-11 08:14:33,375 | INFO     | exitcode: 0
[2026-01-11 03:15:13] 2026-01-11 08:14:33,375 | INFO     | exitmsg: OK
[2026-01-11 03:15:13] 2026-01-11 08:14:33,375 | INFO     | cpuconsumptiontime: 42073 s
[2026-01-11 03:15:13] 2026-01-11 08:14:33,375 | INFO     | nevents: 400
[2026-01-11 03:15:13] 2026-01-11 08:14:33,375 | INFO     | neventsw: 0
[2026-01-11 03:15:13] 2026-01-11 08:14:33,375 | INFO     | pid: 146129
[2026-01-11 03:15:13] 2026-01-11 08:14:33,375 | INFO     | pgrp: 146129
[2026-01-11 03:15:13] 2026-01-11 08:14:33,375 | INFO     | corecount: 8
[2026-01-11 03:15:13] 2026-01-11 08:14:33,375 | INFO     | event service: False
[2026-01-11 03:15:13] 2026-01-11 08:14:33,375 | INFO     | sizes: {0: 2283198, 1: 2283799, 2: 2283911, 3: 2284110, 14: 2284110, 17: 2284400, 25: 2284556, 12168: 2314379, 12171: 2323377, 12173: 2323433, 12182: 2323627}
[2026-01-11 03:15:13] 2026-01-11 08:14:33,375 | INFO     | --------------------------------------------------
[2026-01-11 03:15:13] 2026-01-11 08:14:33,375 | INFO     | 
[2026-01-11 03:15:13] 2026-01-11 08:14:33,375 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-11 03:15:13] 2026-01-11 08:14:33,421 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 03:15:13] 2026-01-11 08:14:33,421 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 03:15:13] 2026-01-11 08:14:33,422 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 03:15:13] 2026-01-11 08:14:33,422 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 03:15:13] 2026-01-11 08:14:33,422 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 03:15:13] 2026-01-11 08:14:33,422 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 03:15:13] 2026-01-11 08:14:33,422 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 03:15:13] 2026-01-11 08:14:33,422 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 03:15:13] 2026-01-11 08:14:33,422 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 03:15:13] 2026-01-11 08:14:33,422 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 03:15:13] 2026-01-11 08:14:33,422 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 03:15:13] 2026-01-11 08:14:33,422 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 03:15:13] 2026-01-11 08:14:33,422 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 03:15:13] 2026-01-11 08:14:33,422 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 03:15:13] 2026-01-11 08:14:33,423 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 03:15:13] 2026-01-11 08:14:33,423 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 03:15:13] 2026-01-11 08:14:33,423 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 03:15:13] 2026-01-11 08:14:33,423 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 03:15:13] 2026-01-11 08:14:33,423 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 03:15:13] 2026-01-11 08:14:33,423 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 03:15:13] 2026-01-11 08:14:33,423 | INFO     | job 6965941512 has completed (purged errors)
[2026-01-11 03:15:13] 2026-01-11 08:14:33,423 | INFO     | overall cleanup function is called
[2026-01-11 03:15:13] 2026-01-11 08:14:34,432 | INFO     | --- collectZombieJob: --- 10, [146129]
[2026-01-11 03:15:13] 2026-01-11 08:14:34,432 | INFO     | zombie collector waiting for pid 146129
[2026-01-11 03:15:13] 2026-01-11 08:14:34,432 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 03:15:13] 2026-01-11 08:14:34,433 | INFO     | collected zombie processes
[2026-01-11 03:15:13] 2026-01-11 08:14:34,433 | INFO     | will attempt to kill all subprocesses of pid=146129
[2026-01-11 03:15:13] 2026-01-11 08:14:34,920 | INFO     | process IDs to be killed: [146129] (in reverse order)
[2026-01-11 03:15:13] 2026-01-11 08:14:35,066 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 03:15:13] 2026-01-11 08:14:35,066 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 03:15:13] 2026-01-11 08:14:35,083 | INFO     | did not find any defunct processes belonging to 146129
[2026-01-11 03:15:13] 2026-01-11 08:14:35,100 | INFO     | did not find any defunct processes belonging to 146129
[2026-01-11 03:15:13] 2026-01-11 08:14:35,101 | INFO     | ready for new job
[2026-01-11 03:15:13] 2026-01-11 08:14:35,101 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 03:15:13] 2026-01-11 08:14:35,104 | INFO     | ***************************************
[2026-01-11 03:15:13] 2026-01-11 08:14:35,104 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 03:15:13] 2026-01-11 08:14:35,104 | INFO     | ***************************************
[2026-01-11 03:15:13] 2026-01-11 08:14:35,104 | INFO     | 
[2026-01-11 03:15:13] 2026-01-11 08:14:35,131 | INFO     | architecture information:
[2026-01-11 03:15:13] 2026-01-11 08:14:35,152 | INFO     | executing command: cat /etc/os-release
[2026-01-11 03:15:13] 2026-01-11 08:14:35,169 | INFO     | cat /etc/os-release:
[2026-01-11 03:15:13] NAME="CentOS Linux"
[2026-01-11 03:15:13] VERSION="7 (Core)"
[2026-01-11 03:15:13] ID="centos"
[2026-01-11 03:15:13] ID_LIKE="rhel fedora"
[2026-01-11 03:15:13] VERSION_ID="7"
[2026-01-11 03:15:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 03:15:13] ANSI_COLOR="0;31"
[2026-01-11 03:15:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 03:15:13] HOME_URL="https://www.centos.org/"
[2026-01-11 03:15:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 03:15:13] 
[2026-01-11 03:15:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 03:15:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 03:15:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 03:15:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 03:15:13] 
[2026-01-11 03:15:13] 2026-01-11 08:14:35,169 | INFO     | ***************************************
[2026-01-11 03:15:13] 2026-01-11 08:14:35,672 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-11 03:15:13] 2026-01-11 08:14:35,702 | INFO     | sufficient remaining disk space (124198584320 B)
[2026-01-11 03:15:13] 2026-01-11 08:14:35,703 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 03:15:13] 2026-01-11 08:14:35,703 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 03:15:13] 2026-01-11 08:14:35,703 | INFO     | update_server=False
[2026-01-11 03:15:13] 2026-01-11 08:14:35,703 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 03:15:13] 2026-01-11 08:14:35,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 03:15:13] 2026-01-11 08:14:35,704 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 03:15:13] 2026-01-11 08:14:35,826 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 03:15:13] 2026-01-11 08:14:35,826 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 03:15:13] 2026-01-11 08:14:35,826 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 03:15:13] 2026-01-11 08:14:35,826 | INFO     | will abort loop
[2026-01-11 03:15:13] 2026-01-11 08:14:35,870 | INFO     | all job control threads have been joined
[2026-01-11 03:15:13] 2026-01-11 08:14:36,015 | INFO     | all data control threads have been joined
[2026-01-11 03:15:13] 2026-01-11 08:14:36,708 | INFO     | [job] retrieve thread has finished
[2026-01-11 03:15:13] 2026-01-11 08:14:36,727 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 03:15:13] 2026-01-11 08:14:36,832 | INFO     | [job] job monitor thread has finished
[2026-01-11 03:15:13] 2026-01-11 08:14:36,875 | INFO     | [job] control thread has finished
[2026-01-11 03:15:13] 2026-01-11 08:14:37,021 | INFO     | [data] control thread has finished
[2026-01-11 03:15:13] 2026-01-11 08:14:37,162 | INFO     | all payload control threads have been joined
[2026-01-11 03:15:13] 2026-01-11 08:14:37,708 | INFO     | [data] copytool_out thread has finished
[2026-01-11 03:15:13] 2026-01-11 08:14:37,814 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 03:15:13] 2026-01-11 08:14:37,928 | INFO     | [payload] failed_post thread has finished
[2026-01-11 03:15:13] 2026-01-11 08:14:38,088 | INFO     | [data] copytool_in thread has finished
[2026-01-11 03:15:13] 2026-01-11 08:14:38,093 | INFO     | [job] validate thread has finished
[2026-01-11 03:15:13] 2026-01-11 08:14:38,095 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 03:15:13] 2026-01-11 08:14:38,172 | INFO     | [payload] control thread has finished
[2026-01-11 03:15:13] 2026-01-11 08:14:38,294 | INFO     | [payload] validate_post thread has finished
[2026-01-11 03:15:13] 2026-01-11 08:14:38,386 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 03:15:13] 2026-01-11 08:14:39,392 | INFO     | [job] queue monitor thread has finished
[2026-01-11 03:15:13] 2026-01-11 08:14:39,712 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 03:15:13] 2026-01-11 08:14:46,198 | INFO     | job.realtimelogging is not enabled
[2026-01-11 03:15:13] 2026-01-11 08:14:47,207 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 03:15:13] 2026-01-11 08:15:05,895 | INFO     | PID=134525 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 03:15:13] 2026-01-11 08:15:05,895 | INFO     | .. there are 29 such processes running
[2026-01-11 03:15:13] 2026-01-11 08:15:05,896 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 03:15:13] 2026-01-11 08:15:05,896 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 03:15:13] 2026-01-11 08:15:05,896 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 03:15:13] 2026-01-11 08:15:07,754 | INFO     | [monitor] cgroup control has ended
[2026-01-11 03:15:13] 2026-01-11 08:15:08,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140029190547264)>', '<ExcThread(monitor, started 140028835501824)>']
[2026-01-11 03:15:13] 2026-01-11 08:15:08,912 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 03:15:13] 2026-01-11 08:15:08,912 | INFO     | [monitor] control thread has ended
[2026-01-11 03:15:13] 2026-01-11 08:15:13,383 | INFO     | all workflow threads have been joined
[2026-01-11 03:15:13] 2026-01-11 08:15:13,383 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 03:15:13] 2026-01-11 08:15:13,384 | INFO     | traces error code: 0
[2026-01-11 03:15:13] 2026-01-11 08:15:13,384 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 03:15:13] 2026-01-11 08:15:13,609 [wrapper] ==== pilot stdout END ====
[2026-01-11 03:15:13] 2026-01-11 08:15:13,620 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 03:15:13] 2026-01-11 08:15:13,623 [wrapper] pilotpid: 134525
[2026-01-11 03:15:13] 2026-01-11 08:15:13,626 [wrapper] Pilot exit status: 0
[2026-01-11 03:15:13] 2026-01-11 08:15:13,644 [wrapper] pandaids: 6965941512
[2026-01-11 03:15:13] 2026-01-11 08:15:13,746 [wrapper] cleanup supervisor_pilot 1114943 134526
[2026-01-11 03:15:13] 2026-01-11 08:15:13,765 [wrapper] Test setup, not cleaning
[2026-01-11 03:15:13] 2026-01-11 08:15:13,769 [wrapper] apfmon messages muted
[2026-01-11 03:15:13] 2026-01-11 08:15:13,772 [wrapper] ==== wrapper stdout END ====
[2026-01-11 03:15:13] 2026-01-11 08:15:13,779 [wrapper] ==== wrapper stderr END ====
[2026-01-11 03:15:13]  *** Error codes and diagnostics ***
[2026-01-11 03:15:13]     "exeErrorCode": 0,
[2026-01-11 03:15:13]     "exeErrorDiag": "",
[2026-01-11 03:15:13]     "pilotErrorCode": 0,
[2026-01-11 03:15:13]     "pilotErrorDiag": "",
[2026-01-11 03:15:13]  *** Listing of results directory ***
[2026-01-11 03:15:13] total 1153184
[2026-01-11 03:15:13] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-11 03:15:13] -rwx------. 1 boincer umatlas     36322 Jan 10 22:34 runpilot2-wrapper.sh
[2026-01-11 03:15:13] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 22:35 queuedata.json
[2026-01-11 03:15:13] -rw-r--r--. 1 boincer umatlas       100 Jan 10 23:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 03:15:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 23:49 run_atlas
[2026-01-11 03:15:13] -rw-r--r--. 1 boincer umatlas       105 Jan 10 23:49 job.xml
[2026-01-11 03:15:13] -rw-r--r--. 2 boincer umatlas 916354918 Jan 10 23:49 EVNT.48039248._000058.pool.root.1
[2026-01-11 03:15:13] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 23:49 start_atlas.sh
[2026-01-11 03:15:13] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 23:49 shared
[2026-01-11 03:15:13] -rw-r--r--. 2 boincer umatlas    592422 Jan 10 23:49 input.tar.gz
[2026-01-11 03:15:13] -rw-r--r--. 1 boincer umatlas         0 Jan 10 23:49 boinc_lockfile
[2026-01-11 03:15:13] -rw-r--r--. 1 boincer umatlas      2592 Jan 10 23:50 pandaJob.out
[2026-01-11 03:15:13] -rw-------. 1 boincer umatlas        57 Jan 10 23:50 setup.sh.local
[2026-01-11 03:15:13] -rw-------. 1 boincer umatlas    989548 Jan 10 23:50 agis_schedconf.cvmfs.json
[2026-01-11 03:15:13] drwx------. 5 boincer umatlas      4096 Jan 10 23:50 pilot3
[2026-01-11 03:15:13] -rw-r--r--. 1 boincer umatlas      6957 Jan 11 03:10 init_data.xml
[2026-01-11 03:15:13] -rw-------. 1 boincer umatlas 256509789 Jan 11 03:13 HITS.48039250._006980.pool.root.1
[2026-01-11 03:15:13] -rw-r--r--. 1 boincer umatlas       532 Jan 11 03:13 boinc_task_state.xml
[2026-01-11 03:15:13] -rw-------. 1 boincer umatlas      1036 Jan 11 03:14 memory_monitor_summary.json
[2026-01-11 03:15:13] -rw-------. 1 boincer umatlas   1516240 Jan 11 03:14 agis_ddmendpoints.agis.ALL.json
[2026-01-11 03:15:13] -rw-------. 1 boincer umatlas    429782 Jan 11 03:14 log.48039250._006980.job.log.tgz.1
[2026-01-11 03:15:13] -rw-------. 1 boincer umatlas      7780 Jan 11 03:14 heartbeat.json
[2026-01-11 03:15:13] -rw-------. 1 boincer umatlas        95 Jan 11 03:15 pilot_heartbeat.json
[2026-01-11 03:15:13] -rw-------. 1 boincer umatlas      5082 Jan 11 03:15 pilotlog.txt
[2026-01-11 03:15:13] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 03:15 boinc_mmap_file
[2026-01-11 03:15:13] -rw-r--r--. 1 boincer umatlas        28 Jan 11 03:15 wrapper_checkpoint.txt
[2026-01-11 03:15:13] -rw-------. 1 boincer umatlas   1609148 Jan 11 03:15 log.48039250._006980.job.log.1
[2026-01-11 03:15:13] -rw-------. 1 boincer umatlas       357 Jan 11 03:15 output.list
[2026-01-11 03:15:13] -rw-r--r--. 1 boincer umatlas       620 Jan 11 03:15 runtime_log
[2026-01-11 03:15:13] -rw-------. 1 boincer umatlas   2058240 Jan 11 03:15 result.tar.gz
[2026-01-11 03:15:13] -rw-r--r--. 1 boincer umatlas      9343 Jan 11 03:15 runtime_log.err
[2026-01-11 03:15:13] -rw-------. 1 boincer umatlas       656 Jan 11 03:15 i2SLDmoO1y8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkhhKDmVmOCqn.diag
[2026-01-11 03:15:13] -rw-r--r--. 1 boincer umatlas     21388 Jan 11 03:15 stderr.txt
[2026-01-11 03:15:13] HITS file was successfully produced:
[2026-01-11 03:15:13] -rw-------. 1 boincer umatlas 256509789 Jan 11 03:13 shared/HITS.pool.root.1
[2026-01-11 03:15:13]  *** Contents of shared directory: ***
[2026-01-11 03:15:13] total 1147996
[2026-01-11 03:15:13] -rw-r--r--. 2 boincer umatlas 916354918 Jan 10 23:49 ATLAS.root_0
[2026-01-11 03:15:13] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 23:49 start_atlas.sh
[2026-01-11 03:15:13] -rw-r--r--. 2 boincer umatlas    592422 Jan 10 23:49 input.tar.gz
[2026-01-11 03:15:13] -rw-------. 1 boincer umatlas 256509789 Jan 11 03:13 HITS.pool.root.1
[2026-01-11 03:15:13] -rw-------. 1 boincer umatlas   2058240 Jan 11 03:15 result.tar.gz
03:15:35 (128672): run_atlas exited; CPU time 42414.188224
03:15:35 (128672): called boinc_finish(0)

</stderr_txt>
]]>

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