Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:03:42 (985476): wrapper (7.7.26015): starting
23:03:42 (985476): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 23:03:42] Arguments: --nthreads 8
[2026-01-10 23:03:42] Threads: 8
[2026-01-10 23:03:42] Checking for CVMFS
[2026-01-10 23:03:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 23:03:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 23:03:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 23:03:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 23:03:45] 2.13.3.0 5695 26184 179360 155002 3 236 26608376 40960001 11554 16776704 0 20305393 99.708 17487940 46307 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 23:03:45] CVMFS is ok
[2026-01-10 23:03:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 23:03:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 23:03:45] Further information can be found at the LHC@home message board.
[2026-01-10 23:03:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 23:03:45] Checking for apptainer binary...
[2026-01-10 23:03:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 23:03:45] Running /usr/bin/apptainer --version
[2026-01-10 23:03:45] apptainer version 1.4.5-2.el9
[2026-01-10 23:03:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 23:03:47] c-210-37-4.aglt2.org
[2026-01-10 23:03:47] apptainer works
[2026-01-10 23:03:47] Set ATHENA_PROC_NUMBER=8
[2026-01-10 23:03:47] Set ATHENA_CORE_NUMBER=8
[2026-01-10 23:03:47] Starting ATLAS job with PandaID=6965941713
[2026-01-10 23:03:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 04:02:14]  *** The last 200 lines of the pilot log: ***
[2026-01-11 04:02:14] 2026-01-11 09:01:41,580 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3164.011374999999
[2026-01-11 04:02:14] 2026-01-11 09:01:41,590 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965941713/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 04:02:14] 2026-01-11 09:01:41,590 | INFO     | extracted standard info from prmon json
[2026-01-11 04:02:14] 2026-01-11 09:01:41,590 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 04:02:14] 2026-01-11 09:01:41,590 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 04:02:14] 2026-01-11 09:01:41,591 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 04:02:14] 2026-01-11 09:01:41,591 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 04:02:14] 2026-01-11 09:01:41,596 | INFO     | fitting pss+swap vs Time
[2026-01-11 04:02:14] 2026-01-11 09:01:41,596 | INFO     | sum of square deviations: 7483718575.238717
[2026-01-11 04:02:14] 2026-01-11 09:01:41,598 | INFO     | sum of deviations: 128440181739.8097
[2026-01-11 04:02:14] 2026-01-11 09:01:41,598 | INFO     | mean x: 1768113297.602076
[2026-01-11 04:02:14] 2026-01-11 09:01:41,598 | INFO     | mean y: 2529125.650519031
[2026-01-11 04:02:14] 2026-01-11 09:01:41,598 | INFO     | intersect: -30342918929.007374
[2026-01-11 04:02:14] 2026-01-11 09:01:41,599 | INFO     | chi2: 4.336492220016203
[2026-01-11 04:02:14] 2026-01-11 09:01:41,599 | INFO     | sum of square deviations: 7101978438.394365
[2026-01-11 04:02:14] 2026-01-11 09:01:41,601 | INFO     | sum of deviations: 143692937441.87323
[2026-01-11 04:02:14] 2026-01-11 09:01:41,601 | INFO     | mean x: 1768113145.1126761
[2026-01-11 04:02:14] 2026-01-11 09:01:41,601 | INFO     | mean y: 2535112.7852112674
[2026-01-11 04:02:14] 2026-01-11 09:01:41,602 | INFO     | intersect: -35771351523.833374
[2026-01-11 04:02:14] 2026-01-11 09:01:41,602 | INFO     | chi2: 3.6659852457330344
[2026-01-11 04:02:14] 2026-01-11 09:01:41,602 | INFO     | current chi2=3.6659852457330344 (change=15.46196649882756 %)
[2026-01-11 04:02:14] 2026-01-11 09:01:41,602 | INFO     | right removable region: 283
[2026-01-11 04:02:14] 2026-01-11 09:01:41,603 | INFO     | sum of square deviations: 7101889683.616193
[2026-01-11 04:02:14] 2026-01-11 09:01:41,604 | INFO     | sum of deviations: 45190447306.37323
[2026-01-11 04:02:14] 2026-01-11 09:01:41,604 | INFO     | mean x: 1768113450.109155
[2026-01-11 04:02:14] 2026-01-11 09:01:41,604 | INFO     | mean y: 2562300.471830986
[2026-01-11 04:02:14] 2026-01-11 09:01:41,605 | INFO     | intersect: -11248223231.043568
[2026-01-11 04:02:14] 2026-01-11 09:01:41,605 | INFO     | chi2: 1.2912335194201239
[2026-01-11 04:02:14] 2026-01-11 09:01:41,605 | INFO     | current chi2=1.2912335194201239 (change=70.22400931656003 %)
[2026-01-11 04:02:14] 2026-01-11 09:01:41,605 | INFO     | sum of square deviations: 6733288276.193588
[2026-01-11 04:02:14] 2026-01-11 09:01:41,607 | INFO     | sum of deviations: 14308439002.967735
[2026-01-11 04:02:14] 2026-01-11 09:01:41,607 | INFO     | mean x: 1768113602.612903
[2026-01-11 04:02:14] 2026-01-11 09:01:41,607 | INFO     | mean y: 2575081.2867383515
[2026-01-11 04:02:14] 2026-01-11 09:01:41,607 | INFO     | intersect: -3754719214.6892643
[2026-01-11 04:02:14] 2026-01-11 09:01:41,608 | INFO     | chi2: 0.920461884121408
[2026-01-11 04:02:14] 2026-01-11 09:01:41,608 | INFO     | current chi2=0.920461884121408 (change=28.714529922149527 %)
[2026-01-11 04:02:14] 2026-01-11 09:01:41,608 | INFO     | sum of square deviations: 6377697772.715297
[2026-01-11 04:02:14] 2026-01-11 09:01:41,610 | INFO     | sum of deviations: -3012329588.4525547
[2026-01-11 04:02:14] 2026-01-11 09:01:41,610 | INFO     | mean x: 1768113755.109489
[2026-01-11 04:02:14] 2026-01-11 09:01:41,610 | INFO     | mean y: 2582485.9817518247
[2026-01-11 04:02:14] 2026-01-11 09:01:41,610 | INFO     | intersect: 837702237.6658567
[2026-01-11 04:02:14] 2026-01-11 09:01:41,610 | INFO     | chi2: 0.786563870853623
[2026-01-11 04:02:14] 2026-01-11 09:01:41,611 | INFO     | current chi2=0.786563870853623 (change=14.546828671302583 %)
[2026-01-11 04:02:14] 2026-01-11 09:01:41,611 | INFO     | left removable region: 30
[2026-01-11 04:02:14] 2026-01-11 09:01:41,611 | INFO     | sum of square deviations: 5020746940.474302
[2026-01-11 04:02:14] 2026-01-11 09:01:41,612 | INFO     | sum of deviations: 4220409411.2253003
[2026-01-11 04:02:14] 2026-01-11 09:01:41,612 | INFO     | mean x: 1768114029.604743
[2026-01-11 04:02:14] 2026-01-11 09:01:41,612 | INFO     | mean y: 2593876.3122529644
[2026-01-11 04:02:14] 2026-01-11 09:01:41,613 | INFO     | intersect: -1483672047.6895664
[2026-01-11 04:02:14] 2026-01-11 09:01:41,613 | INFO     | chi2: 0.038131425943282574
[2026-01-11 04:02:14] 2026-01-11 09:01:41,613 | INFO     | current memory leak: 0.84 B/s (using 253 data points, chi2=0.04)
[2026-01-11 04:02:14] 2026-01-11 09:01:41,614 | INFO     | could have reported an average CPU frequency of 3115 MHz (13 samples)
[2026-01-11 04:02:14] 2026-01-11 09:01:41,614 | INFO     | ..............................
[2026-01-11 04:02:14] 2026-01-11 09:01:41,614 | INFO     | . Timing measurements:
[2026-01-11 04:02:14] 2026-01-11 09:01:41,614 | INFO     | . get job = 0 s
[2026-01-11 04:02:14] 2026-01-11 09:01:41,614 | INFO     | . initial setup = 10 s
[2026-01-11 04:02:14] 2026-01-11 09:01:41,614 | INFO     | . payload setup = 52 s
[2026-01-11 04:02:14] 2026-01-11 09:01:41,614 | INFO     | . stage-in = 0 s
[2026-01-11 04:02:14] 2026-01-11 09:01:41,614 | INFO     | . payload execution = 17605 s
[2026-01-11 04:02:14] 2026-01-11 09:01:41,614 | INFO     | . stage-out = 1 s
[2026-01-11 04:02:14] 2026-01-11 09:01:41,614 | INFO     | . log creation = 0 s
[2026-01-11 04:02:14] 2026-01-11 09:01:41,614 | INFO     | ..............................
[2026-01-11 04:02:14] 2026-01-11 09:01:41,697 | INFO     | 
[2026-01-11 04:02:14] 2026-01-11 09:01:41,697 | INFO     | job summary report
[2026-01-11 04:02:14] 2026-01-11 09:01:41,697 | INFO     | --------------------------------------------------
[2026-01-11 04:02:14] 2026-01-11 09:01:41,697 | INFO     | PanDA job id: 6965941713
[2026-01-11 04:02:14] 2026-01-11 09:01:41,697 | INFO     | task id: 48039250
[2026-01-11 04:02:14] 2026-01-11 09:01:41,697 | INFO     | errors: (none)
[2026-01-11 04:02:14] 2026-01-11 09:01:41,697 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 04:02:14] 2026-01-11 09:01:41,697 | INFO     | pilot state: finished 
[2026-01-11 04:02:14] 2026-01-11 09:01:41,698 | INFO     | transexitcode: 0
[2026-01-11 04:02:14] 2026-01-11 09:01:41,698 | INFO     | exeerrorcode: 0
[2026-01-11 04:02:14] 2026-01-11 09:01:41,698 | INFO     | exeerrordiag: 
[2026-01-11 04:02:14] 2026-01-11 09:01:41,698 | INFO     | exitcode: 0
[2026-01-11 04:02:14] 2026-01-11 09:01:41,698 | INFO     | exitmsg: OK
[2026-01-11 04:02:14] 2026-01-11 09:01:41,698 | INFO     | cpuconsumptiontime: 51794 s
[2026-01-11 04:02:14] 2026-01-11 09:01:41,698 | INFO     | nevents: 400
[2026-01-11 04:02:14] 2026-01-11 09:01:41,698 | INFO     | neventsw: 0
[2026-01-11 04:02:14] 2026-01-11 09:01:41,698 | INFO     | pid: 998813
[2026-01-11 04:02:14] 2026-01-11 09:01:41,698 | INFO     | pgrp: 998813
[2026-01-11 04:02:14] 2026-01-11 09:01:41,698 | INFO     | corecount: 8
[2026-01-11 04:02:14] 2026-01-11 09:01:41,698 | INFO     | event service: False
[2026-01-11 04:02:14] 2026-01-11 09:01:41,698 | INFO     | sizes: {0: 2283200, 1: 2283885, 2: 2283885, 3: 2283885, 4: 2284084, 15: 2284112, 26: 2284268, 38: 2284296, 49: 2284324, 53: 2284614, 61: 2284642, 17661: 2316977, 1
[2026-01-11 04:02:14] 2026-01-11 09:01:41,698 | INFO     | --------------------------------------------------
[2026-01-11 04:02:14] 2026-01-11 09:01:41,698 | INFO     | 
[2026-01-11 04:02:14] 2026-01-11 09:01:41,699 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-11 04:02:14] 2026-01-11 09:01:41,718 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 04:02:14] 2026-01-11 09:01:41,719 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 04:02:14] 2026-01-11 09:01:41,719 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 04:02:14] 2026-01-11 09:01:41,719 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 04:02:14] 2026-01-11 09:01:41,719 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 04:02:14] 2026-01-11 09:01:41,719 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 04:02:14] 2026-01-11 09:01:41,719 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 04:02:14] 2026-01-11 09:01:41,719 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 04:02:14] 2026-01-11 09:01:41,719 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 04:02:14] 2026-01-11 09:01:41,719 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 04:02:14] 2026-01-11 09:01:41,719 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 04:02:14] 2026-01-11 09:01:41,720 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 04:02:14] 2026-01-11 09:01:41,720 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 04:02:14] 2026-01-11 09:01:41,720 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 04:02:14] 2026-01-11 09:01:41,720 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 04:02:14] 2026-01-11 09:01:41,720 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 04:02:14] 2026-01-11 09:01:41,720 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 04:02:14] 2026-01-11 09:01:41,720 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 04:02:14] 2026-01-11 09:01:41,720 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 04:02:14] 2026-01-11 09:01:41,720 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 04:02:14] 2026-01-11 09:01:41,720 | INFO     | job 6965941713 has completed (purged errors)
[2026-01-11 04:02:14] 2026-01-11 09:01:41,720 | INFO     | overall cleanup function is called
[2026-01-11 04:02:14] 2026-01-11 09:01:42,118 | INFO     | PID=991066 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 04:02:14] 2026-01-11 09:01:42,118 | INFO     | .. there are 8 such processes running
[2026-01-11 04:02:14] 2026-01-11 09:01:42,729 | INFO     | --- collectZombieJob: --- 10, [998813]
[2026-01-11 04:02:14] 2026-01-11 09:01:42,729 | INFO     | zombie collector waiting for pid 998813
[2026-01-11 04:02:14] 2026-01-11 09:01:42,729 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 04:02:14] 2026-01-11 09:01:42,729 | INFO     | collected zombie processes
[2026-01-11 04:02:14] 2026-01-11 09:01:42,730 | INFO     | will attempt to kill all subprocesses of pid=998813
[2026-01-11 04:02:14] 2026-01-11 09:01:42,957 | INFO     | process IDs to be killed: [998813] (in reverse order)
[2026-01-11 04:02:14] 2026-01-11 09:01:43,037 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 04:02:14] 2026-01-11 09:01:43,037 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 04:02:14] 2026-01-11 09:01:43,048 | INFO     | did not find any defunct processes belonging to 998813
[2026-01-11 04:02:14] 2026-01-11 09:01:43,058 | INFO     | did not find any defunct processes belonging to 998813
[2026-01-11 04:02:14] 2026-01-11 09:01:43,058 | INFO     | ready for new job
[2026-01-11 04:02:14] 2026-01-11 09:01:43,058 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 04:02:14] 2026-01-11 09:01:43,062 | INFO     | ***************************************
[2026-01-11 04:02:14] 2026-01-11 09:01:43,062 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 04:02:14] 2026-01-11 09:01:43,062 | INFO     | ***************************************
[2026-01-11 04:02:14] 2026-01-11 09:01:43,062 | INFO     | 
[2026-01-11 04:02:14] 2026-01-11 09:01:43,066 | INFO     | architecture information:
[2026-01-11 04:02:14] 2026-01-11 09:01:43,067 | INFO     | executing command: cat /etc/os-release
[2026-01-11 04:02:14] 2026-01-11 09:01:43,084 | INFO     | cat /etc/os-release:
[2026-01-11 04:02:14] NAME="CentOS Linux"
[2026-01-11 04:02:14] VERSION="7 (Core)"
[2026-01-11 04:02:14] ID="centos"
[2026-01-11 04:02:14] ID_LIKE="rhel fedora"
[2026-01-11 04:02:14] VERSION_ID="7"
[2026-01-11 04:02:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 04:02:14] ANSI_COLOR="0;31"
[2026-01-11 04:02:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 04:02:14] HOME_URL="https://www.centos.org/"
[2026-01-11 04:02:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 04:02:14] 
[2026-01-11 04:02:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 04:02:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 04:02:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 04:02:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 04:02:14] 
[2026-01-11 04:02:14] 2026-01-11 09:01:43,084 | INFO     | ***************************************
[2026-01-11 04:02:14] 2026-01-11 09:01:43,587 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-11 04:02:14] 2026-01-11 09:01:43,604 | INFO     | sufficient remaining disk space (74051485696 B)
[2026-01-11 04:02:14] 2026-01-11 09:01:43,604 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 04:02:14] 2026-01-11 09:01:43,604 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 04:02:14] 2026-01-11 09:01:43,604 | INFO     | update_server=False
[2026-01-11 04:02:14] 2026-01-11 09:01:43,604 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 04:02:14] 2026-01-11 09:01:43,605 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:02:14] 2026-01-11 09:01:43,605 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 04:02:14] 2026-01-11 09:01:43,884 | INFO     | all payload control threads have been joined
[2026-01-11 04:02:14] 2026-01-11 09:01:43,900 | INFO     | all job control threads have been joined
[2026-01-11 04:02:14] 2026-01-11 09:01:44,471 | INFO     | all data control threads have been joined
[2026-01-11 04:02:14] 2026-01-11 09:01:44,581 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:02:14] 2026-01-11 09:01:44,581 | INFO     | aborting loop
[2026-01-11 04:02:14] 2026-01-11 09:01:44,609 | INFO     | [job] retrieve thread has finished
[2026-01-11 04:02:14] 2026-01-11 09:01:44,610 | INFO     | [job] queue monitor thread has finished
[2026-01-11 04:02:14] 2026-01-11 09:01:44,646 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 04:02:14] 2026-01-11 09:01:44,889 | INFO     | [payload] control thread has finished
[2026-01-11 04:02:14] 2026-01-11 09:01:44,905 | INFO     | [job] control thread has finished
[2026-01-11 04:02:14] 2026-01-11 09:01:45,363 | INFO     | [payload] validate_post thread has finished
[2026-01-11 04:02:14] 2026-01-11 09:01:45,477 | INFO     | [data] control thread has finished
[2026-01-11 04:02:14] 2026-01-11 09:01:45,548 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 04:02:14] 2026-01-11 09:01:45,582 | INFO     | [job] validate thread has finished
[2026-01-11 04:02:14] 2026-01-11 09:01:45,586 | INFO     | [job] job monitor thread has finished
[2026-01-11 04:02:14] 2026-01-11 09:01:45,610 | INFO     | [data] copytool_out thread has finished
[2026-01-11 04:02:14] 2026-01-11 09:01:45,780 | INFO     | [data] copytool_in thread has finished
[2026-01-11 04:02:14] 2026-01-11 09:01:45,862 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 04:02:14] 2026-01-11 09:01:45,915 | INFO     | [payload] failed_post thread has finished
[2026-01-11 04:02:14] 2026-01-11 09:01:46,017 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 04:02:14] 2026-01-11 09:01:49,868 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 04:02:14] 2026-01-11 09:01:54,418 | INFO     | job.realtimelogging is not enabled
[2026-01-11 04:02:14] 2026-01-11 09:01:55,423 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 04:02:14] 2026-01-11 09:01:57,590 | INFO     | [monitor] cgroup control has ended
[2026-01-11 04:02:14] 2026-01-11 09:01:57,994 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139990032262976)>', '<ExcThread(monitor, started 139989492954880)>']
[2026-01-11 04:02:14] 2026-01-11 09:02:03,020 | INFO     | all workflow threads have been joined
[2026-01-11 04:02:14] 2026-01-11 09:02:03,020 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 04:02:14] 2026-01-11 09:02:03,021 | INFO     | traces error code: 0
[2026-01-11 04:02:14] 2026-01-11 09:02:03,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 04:02:14] 2026-01-11 09:02:14,513 | INFO     | PID=991066 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 04:02:14] 2026-01-11 09:02:14,513 | INFO     | .. there are 8 such processes running
[2026-01-11 04:02:14] 2026-01-11 09:02:14,513 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 04:02:14] 2026-01-11 09:02:14,514 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 04:02:14] 2026-01-11 09:02:14,514 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 04:02:14] 2026-01-11 09:02:14,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 04:02:14] 2026-01-11 09:02:14,514 | INFO     | [monitor] control thread has ended
[2026-01-11 04:02:14] 2026-01-11 09:02:14,693 [wrapper] ==== pilot stdout END ====
[2026-01-11 04:02:14] 2026-01-11 09:02:14,695 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 04:02:14] 2026-01-11 09:02:14,699 [wrapper] pilotpid: 991066
[2026-01-11 04:02:14] 2026-01-11 09:02:14,701 [wrapper] Pilot exit status: 0
[2026-01-11 04:02:14] 2026-01-11 09:02:14,710 [wrapper] pandaids: 6965941713
[2026-01-11 04:02:14] 2026-01-11 09:02:14,761 [wrapper] cleanup supervisor_pilot 1432981 991067
[2026-01-11 04:02:14] 2026-01-11 09:02:14,764 [wrapper] Test setup, not cleaning
[2026-01-11 04:02:14] 2026-01-11 09:02:14,767 [wrapper] apfmon messages muted
[2026-01-11 04:02:14] 2026-01-11 09:02:14,770 [wrapper] ==== wrapper stdout END ====
[2026-01-11 04:02:14] 2026-01-11 09:02:14,772 [wrapper] ==== wrapper stderr END ====
[2026-01-11 04:02:14]  *** Error codes and diagnostics ***
[2026-01-11 04:02:14]     "exeErrorCode": 0,
[2026-01-11 04:02:14]     "exeErrorDiag": "",
[2026-01-11 04:02:14]     "pilotErrorCode": 0,
[2026-01-11 04:02:14]     "pilotErrorDiag": "",
[2026-01-11 04:02:14]  *** Listing of results directory ***
[2026-01-11 04:02:14] total 1157160
[2026-01-11 04:02:14] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-11 04:02:14] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 22:33 queuedata.json
[2026-01-11 04:02:14] -rwx------. 1 boincer umatlas     36322 Jan 10 22:34 runpilot2-wrapper.sh
[2026-01-11 04:02:14] -rw-r--r--. 1 boincer umatlas       100 Jan 10 23:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 04:02:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 23:03 run_atlas
[2026-01-11 04:02:14] -rw-r--r--. 1 boincer umatlas       105 Jan 10 23:03 job.xml
[2026-01-11 04:02:14] -rw-r--r--. 2 boincer umatlas 918615411 Jan 10 23:03 EVNT.48039248._000068.pool.root.1
[2026-01-11 04:02:14] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 23:03 start_atlas.sh
[2026-01-11 04:02:14] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 23:03 shared
[2026-01-11 04:02:14] -rw-r--r--. 2 boincer umatlas    592422 Jan 10 23:03 input.tar.gz
[2026-01-11 04:02:14] -rw-r--r--. 1 boincer umatlas         0 Jan 10 23:03 boinc_lockfile
[2026-01-11 04:02:14] -rw-r--r--. 1 boincer umatlas      2593 Jan 10 23:03 pandaJob.out
[2026-01-11 04:02:14] -rw-------. 1 boincer umatlas        57 Jan 10 23:03 setup.sh.local
[2026-01-11 04:02:14] -rw-------. 1 boincer umatlas    989548 Jan 10 23:05 agis_schedconf.cvmfs.json
[2026-01-11 04:02:14] drwx------. 5 boincer umatlas      4096 Jan 10 23:05 pilot3
[2026-01-11 04:02:14] -rw-r--r--. 1 boincer umatlas      6843 Jan 11 03:56 init_data.xml
[2026-01-11 04:02:14] -rw-r--r--. 1 boincer umatlas       531 Jan 11 04:00 boinc_task_state.xml
[2026-01-11 04:02:14] -rw-------. 1 boincer umatlas 256809088 Jan 11 04:00 HITS.48039250._007181.pool.root.1
[2026-01-11 04:02:14] -rw-------. 1 boincer umatlas      1051 Jan 11 04:01 memory_monitor_summary.json
[2026-01-11 04:02:14] -rw-------. 1 boincer umatlas   1516240 Jan 11 04:01 agis_ddmendpoints.agis.ALL.json
[2026-01-11 04:02:14] -rw-------. 1 boincer umatlas    529005 Jan 11 04:01 log.48039250._007181.job.log.tgz.1
[2026-01-11 04:02:14] -rw-------. 1 boincer umatlas        95 Jan 11 04:01 pilot_heartbeat.json
[2026-01-11 04:02:14] -rw-------. 1 boincer umatlas      7823 Jan 11 04:01 heartbeat.json
[2026-01-11 04:02:14] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 04:01 boinc_mmap_file
[2026-01-11 04:02:14] -rw-r--r--. 1 boincer umatlas        28 Jan 11 04:01 wrapper_checkpoint.txt
[2026-01-11 04:02:14] -rw-------. 1 boincer umatlas       821 Jan 11 04:02 pilotlog.txt
[2026-01-11 04:02:14] -rw-------. 1 boincer umatlas   2265044 Jan 11 04:02 log.48039250._007181.job.log.1
[2026-01-11 04:02:14] -rw-------. 1 boincer umatlas       357 Jan 11 04:02 output.list
[2026-01-11 04:02:14] -rw-r--r--. 1 boincer umatlas       620 Jan 11 04:02 runtime_log
[2026-01-11 04:02:14] -rw-------. 1 boincer umatlas   2816000 Jan 11 04:02 result.tar.gz
[2026-01-11 04:02:14] -rw-r--r--. 1 boincer umatlas      9353 Jan 11 04:02 runtime_log.err
[2026-01-11 04:02:14] -rw-------. 1 boincer umatlas       658 Jan 11 04:02 jBfLDmoO1y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmW0mKDm6fnMKn.diag
[2026-01-11 04:02:14] -rw-r--r--. 1 boincer umatlas     21291 Jan 11 04:02 stderr.txt
[2026-01-11 04:02:14] HITS file was successfully produced:
[2026-01-11 04:02:14] -rw-------. 1 boincer umatlas 256809088 Jan 11 04:00 shared/HITS.pool.root.1
[2026-01-11 04:02:14]  *** Contents of shared directory: ***
[2026-01-11 04:02:14] total 1151236
[2026-01-11 04:02:14] -rw-r--r--. 2 boincer umatlas 918615411 Jan 10 23:03 ATLAS.root_0
[2026-01-11 04:02:14] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 23:03 start_atlas.sh
[2026-01-11 04:02:14] -rw-r--r--. 2 boincer umatlas    592422 Jan 10 23:03 input.tar.gz
[2026-01-11 04:02:14] -rw-------. 1 boincer umatlas 256809088 Jan 11 04:00 HITS.pool.root.1
[2026-01-11 04:02:14] -rw-------. 1 boincer umatlas   2816000 Jan 11 04:02 result.tar.gz
04:02:16 (985476): run_atlas exited; CPU time 52172.654846
04:02:16 (985476): called boinc_finish(0)

</stderr_txt>
]]>

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