Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:37:22 (630407): wrapper (7.7.26015): starting
22:37:22 (630407): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 22:37:22] Arguments: --nthreads 12
[2026-01-10 22:37:22] Threads: 12
[2026-01-10 22:37:22] Checking for CVMFS
[2026-01-10 22:37:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 22:37:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 22:37:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 22:37:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 22:37:24] 2.13.3.0 11857 35011 244128 155002 2 56 19278346 32935937 11961 16776704 0 35213208 99.506 43086744 38509 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 22:37:24] CVMFS is ok
[2026-01-10 22:37:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 22:37:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 22:37:24] Further information can be found at the LHC@home message board.
[2026-01-10 22:37:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 22:37:24] Checking for apptainer binary...
[2026-01-10 22:37:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 22:37:24] Running /usr/bin/apptainer --version
[2026-01-10 22:37:24] apptainer version 1.4.5-2.el9
[2026-01-10 22:37:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 22:37:25] c6-6-39-3.aglt2.org
[2026-01-10 22:37:25] apptainer works
[2026-01-10 22:37:26] Set ATHENA_PROC_NUMBER=12
[2026-01-10 22:37:26] Set ATHENA_CORE_NUMBER=12
[2026-01-10 22:37:26] Starting ATLAS job with PandaID=6965941382
[2026-01-10 22:37:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 05:08:56]  *** The last 200 lines of the pilot log: ***
[2026-01-11 05:08:56] 2026-01-11 10:08:09,193 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2953.9651249999997
[2026-01-11 05:08:56] 2026-01-11 10:08:09,212 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965941382/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 05:08:56] 2026-01-11 10:08:09,213 | INFO     | extracted standard info from prmon json
[2026-01-11 05:08:56] 2026-01-11 10:08:09,213 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 05:08:56] 2026-01-11 10:08:09,213 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 05:08:56] 2026-01-11 10:08:09,213 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 05:08:56] 2026-01-11 10:08:09,213 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 05:08:56] 2026-01-11 10:08:09,250 | INFO     | fitting pss+swap vs Time
[2026-01-11 05:08:56] 2026-01-11 10:08:09,251 | INFO     | sum of square deviations: 17284675668.71474
[2026-01-11 05:08:56] 2026-01-11 10:08:09,278 | INFO     | sum of deviations: -32083648061.824596
[2026-01-11 05:08:56] 2026-01-11 10:08:09,278 | INFO     | mean x: 1768114403.1282723
[2026-01-11 05:08:56] 2026-01-11 10:08:09,278 | INFO     | mean y: 2770611.1596858636
[2026-01-11 05:08:56] 2026-01-11 10:08:09,279 | INFO     | intersect: 3284727491.940933
[2026-01-11 05:08:56] 2026-01-11 10:08:09,279 | INFO     | chi2: 3.2262921757723673
[2026-01-11 05:08:56] 2026-01-11 10:08:09,311 | INFO     | monitor loop #1362: job 0:6965941382 is in state 'finished'
[2026-01-11 05:08:56] 2026-01-11 10:08:09,311 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 05:08:56] 2026-01-11 10:08:09,317 | INFO     | sum of square deviations: 16614820057.750656
[2026-01-11 05:08:56] 2026-01-11 10:08:09,320 | INFO     | sum of deviations: 21440065486.85412
[2026-01-11 05:08:56] 2026-01-11 10:08:09,320 | INFO     | mean x: 1768114250.6312997
[2026-01-11 05:08:56] 2026-01-11 10:08:09,320 | INFO     | mean y: 2782699.1140583553
[2026-01-11 05:08:56] 2026-01-11 10:08:09,320 | INFO     | intersect: -2278824034.513557
[2026-01-11 05:08:56] 2026-01-11 10:08:09,350 | INFO     | chi2: 1.8091740590720629
[2026-01-11 05:08:56] 2026-01-11 10:08:09,350 | INFO     | current chi2=1.8091740590720629 (change=43.9240477766416 %)
[2026-01-11 05:08:56] 2026-01-11 10:08:09,351 | INFO     | sum of square deviations: 15962476662.545763
[2026-01-11 05:08:56] 2026-01-11 10:08:09,354 | INFO     | sum of deviations: 20941855034.650547
[2026-01-11 05:08:56] 2026-01-11 10:08:09,354 | INFO     | mean x: 1768114098.1317205
[2026-01-11 05:08:56] 2026-01-11 10:08:09,354 | INFO     | mean y: 2782582.639784946
[2026-01-11 05:08:56] 2026-01-11 10:08:09,354 | INFO     | intersect: -2316881834.7671733
[2026-01-11 05:08:56] 2026-01-11 10:08:09,359 | INFO     | chi2: 1.809357118215304
[2026-01-11 05:08:56] 2026-01-11 10:08:09,359 | INFO     | current chi2=1.809357118215304 (change=-0.010118382049714434 %)
[2026-01-11 05:08:56] 2026-01-11 10:08:09,359 | INFO     | right removable region: 371
[2026-01-11 05:08:56] 2026-01-11 10:08:09,360 | INFO     | sum of square deviations: 16614720139.214859
[2026-01-11 05:08:56] 2026-01-11 10:08:09,367 | INFO     | sum of deviations: -100927465538.10872
[2026-01-11 05:08:56] 2026-01-11 10:08:09,367 | INFO     | mean x: 1768114555.6366048
[2026-01-11 05:08:56] 2026-01-11 10:08:09,367 | INFO     | mean y: 2786195.196286472
[2026-01-11 05:08:56] 2026-01-11 10:08:09,367 | INFO     | intersect: 10743341521.208218
[2026-01-11 05:08:56] 2026-01-11 10:08:09,368 | INFO     | chi2: 1.6909241820391174
[2026-01-11 05:08:56] 2026-01-11 10:08:09,368 | INFO     | current chi2=1.6909241820391174 (change=47.58924207990202 %)
[2026-01-11 05:08:56] 2026-01-11 10:08:09,368 | INFO     | sum of square deviations: 15962299822.161238
[2026-01-11 05:08:56] 2026-01-11 10:08:09,375 | INFO     | sum of deviations: -94813677134.70966
[2026-01-11 05:08:56] 2026-01-11 10:08:09,376 | INFO     | mean x: 1768114708.1451614
[2026-01-11 05:08:56] 2026-01-11 10:08:09,376 | INFO     | mean y: 2784745.3279569894
[2026-01-11 05:08:56] 2026-01-11 10:08:09,376 | INFO     | intersect: 10505122061.562422
[2026-01-11 05:08:56] 2026-01-11 10:08:09,376 | INFO     | chi2: 1.6561845625252904
[2026-01-11 05:08:56] 2026-01-11 10:08:09,377 | INFO     | current chi2=1.6561845625252904 (change=2.054475291253675 %)
[2026-01-11 05:08:56] 2026-01-11 10:08:09,377 | INFO     | left removable region: 20
[2026-01-11 05:08:56] 2026-01-11 10:08:09,377 | INFO     | sum of square deviations: 13408605148.655268
[2026-01-11 05:08:56] 2026-01-11 10:08:09,384 | INFO     | sum of deviations: -2778732148.498576
[2026-01-11 05:08:56] 2026-01-11 10:08:09,384 | INFO     | mean x: 1768114677.6609685
[2026-01-11 05:08:56] 2026-01-11 10:08:09,384 | INFO     | mean y: 2787433.584045584
[2026-01-11 05:08:56] 2026-01-11 10:08:09,384 | INFO     | intersect: 369202660.41630566
[2026-01-11 05:08:56] 2026-01-11 10:08:09,385 | INFO     | chi2: 0.07085655081762592
[2026-01-11 05:08:56] 2026-01-11 10:08:09,385 | INFO     | current memory leak: -0.21 B/s (using 351 data points, chi2=0.07)
[2026-01-11 05:08:56] 2026-01-11 10:08:09,386 | INFO     | could have reported an average CPU frequency of 2929 MHz (16 samples)
[2026-01-11 05:08:56] 2026-01-11 10:08:09,386 | INFO     | ..............................
[2026-01-11 05:08:56] 2026-01-11 10:08:09,386 | INFO     | . Timing measurements:
[2026-01-11 05:08:56] 2026-01-11 10:08:09,386 | INFO     | . get job = 0 s
[2026-01-11 05:08:56] 2026-01-11 10:08:09,386 | INFO     | . initial setup = 5 s
[2026-01-11 05:08:56] 2026-01-11 10:08:09,386 | INFO     | . payload setup = 28 s
[2026-01-11 05:08:56] 2026-01-11 10:08:09,386 | INFO     | . stage-in = 0 s
[2026-01-11 05:08:56] 2026-01-11 10:08:09,386 | INFO     | . payload execution = 23273 s
[2026-01-11 05:08:56] 2026-01-11 10:08:09,386 | INFO     | . stage-out = 7 s
[2026-01-11 05:08:56] 2026-01-11 10:08:09,386 | INFO     | . log creation = 1 s
[2026-01-11 05:08:56] 2026-01-11 10:08:09,386 | INFO     | ..............................
[2026-01-11 05:08:56] 2026-01-11 10:08:09,539 | INFO     | time since job start (23403s) is within the limit (349056.0s)
[2026-01-11 05:08:56] 2026-01-11 10:08:09,722 | INFO     | 
[2026-01-11 05:08:56] 2026-01-11 10:08:09,723 | INFO     | job summary report
[2026-01-11 05:08:56] 2026-01-11 10:08:09,723 | INFO     | --------------------------------------------------
[2026-01-11 05:08:56] 2026-01-11 10:08:09,723 | INFO     | PanDA job id: 6965941382
[2026-01-11 05:08:56] 2026-01-11 10:08:09,723 | INFO     | task id: 48039250
[2026-01-11 05:08:56] 2026-01-11 10:08:09,723 | INFO     | errors: (none)
[2026-01-11 05:08:56] 2026-01-11 10:08:09,723 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 05:08:56] 2026-01-11 10:08:09,723 | INFO     | pilot state: finished 
[2026-01-11 05:08:56] 2026-01-11 10:08:09,723 | INFO     | transexitcode: 0
[2026-01-11 05:08:56] 2026-01-11 10:08:09,723 | INFO     | exeerrorcode: 0
[2026-01-11 05:08:56] 2026-01-11 10:08:09,723 | INFO     | exeerrordiag: 
[2026-01-11 05:08:56] 2026-01-11 10:08:09,723 | INFO     | exitcode: 0
[2026-01-11 05:08:56] 2026-01-11 10:08:09,723 | INFO     | exitmsg: OK
[2026-01-11 05:08:56] 2026-01-11 10:08:09,723 | INFO     | cpuconsumptiontime: 56753 s
[2026-01-11 05:08:56] 2026-01-11 10:08:09,724 | INFO     | nevents: 400
[2026-01-11 05:08:56] 2026-01-11 10:08:09,724 | INFO     | neventsw: 0
[2026-01-11 05:08:56] 2026-01-11 10:08:09,724 | INFO     | pid: 642213
[2026-01-11 05:08:56] 2026-01-11 10:08:09,724 | INFO     | pgrp: 642213
[2026-01-11 05:08:56] 2026-01-11 10:08:09,724 | INFO     | corecount: 12
[2026-01-11 05:08:56] 2026-01-11 10:08:09,724 | INFO     | event service: False
[2026-01-11 05:08:56] 2026-01-11 10:08:09,724 | INFO     | sizes: {0: 2283854, 1: 2284053, 12: 2284053, 23: 2284371, 23305: 2319149, 23306: 2319148, 23314: 2328330, 23315: 2328386, 23358: 2328580}
[2026-01-11 05:08:56] 2026-01-11 10:08:09,724 | INFO     | --------------------------------------------------
[2026-01-11 05:08:56] 2026-01-11 10:08:09,724 | INFO     | 
[2026-01-11 05:08:56] 2026-01-11 10:08:09,724 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 05:08:56] 2026-01-11 10:08:09,763 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 05:08:56] 2026-01-11 10:08:09,763 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 05:08:56] 2026-01-11 10:08:09,763 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 05:08:56] 2026-01-11 10:08:09,764 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 05:08:56] 2026-01-11 10:08:09,764 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 05:08:56] 2026-01-11 10:08:09,764 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 05:08:56] 2026-01-11 10:08:09,764 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 05:08:56] 2026-01-11 10:08:09,764 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 05:08:56] 2026-01-11 10:08:09,764 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 05:08:56] 2026-01-11 10:08:09,764 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 05:08:56] 2026-01-11 10:08:09,764 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 05:08:56] 2026-01-11 10:08:09,764 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 05:08:56] 2026-01-11 10:08:09,764 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 05:08:56] 2026-01-11 10:08:09,764 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 05:08:56] 2026-01-11 10:08:09,764 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 05:08:56] 2026-01-11 10:08:09,764 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 05:08:56] 2026-01-11 10:08:09,764 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 05:08:56] 2026-01-11 10:08:09,765 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 05:08:56] 2026-01-11 10:08:09,765 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 05:08:56] 2026-01-11 10:08:09,765 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 05:08:56] 2026-01-11 10:08:09,765 | INFO     | job 6965941382 has completed (purged errors)
[2026-01-11 05:08:56] 2026-01-11 10:08:09,765 | INFO     | overall cleanup function is called
[2026-01-11 05:08:56] 2026-01-11 10:08:10,804 | INFO     | --- collectZombieJob: --- 10, [642213]
[2026-01-11 05:08:56] 2026-01-11 10:08:10,804 | INFO     | zombie collector waiting for pid 642213
[2026-01-11 05:08:56] 2026-01-11 10:08:10,804 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 05:08:56] 2026-01-11 10:08:10,804 | INFO     | collected zombie processes
[2026-01-11 05:08:56] 2026-01-11 10:08:10,804 | INFO     | will attempt to kill all subprocesses of pid=642213
[2026-01-11 05:08:56] 2026-01-11 10:08:11,811 | INFO     | process IDs to be killed: [642213] (in reverse order)
[2026-01-11 05:08:56] 2026-01-11 10:08:11,925 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 05:08:56] 2026-01-11 10:08:11,926 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 05:08:56] 2026-01-11 10:08:11,965 | INFO     | did not find any defunct processes belonging to 642213
[2026-01-11 05:08:56] 2026-01-11 10:08:12,027 | INFO     | did not find any defunct processes belonging to 642213
[2026-01-11 05:08:56] 2026-01-11 10:08:12,028 | INFO     | ready for new job
[2026-01-11 05:08:56] 2026-01-11 10:08:12,028 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 05:08:56] 2026-01-11 10:08:12,030 | INFO     | ***************************************
[2026-01-11 05:08:56] 2026-01-11 10:08:12,031 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 05:08:56] 2026-01-11 10:08:12,031 | INFO     | ***************************************
[2026-01-11 05:08:56] 2026-01-11 10:08:12,031 | INFO     | 
[2026-01-11 05:08:56] 2026-01-11 10:08:12,034 | INFO     | architecture information:
[2026-01-11 05:08:56] 2026-01-11 10:08:12,035 | INFO     | executing command: cat /etc/os-release
[2026-01-11 05:08:56] 2026-01-11 10:08:12,156 | INFO     | cat /etc/os-release:
[2026-01-11 05:08:56] NAME="CentOS Linux"
[2026-01-11 05:08:56] VERSION="7 (Core)"
[2026-01-11 05:08:56] ID="centos"
[2026-01-11 05:08:56] ID_LIKE="rhel fedora"
[2026-01-11 05:08:56] VERSION_ID="7"
[2026-01-11 05:08:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 05:08:56] ANSI_COLOR="0;31"
[2026-01-11 05:08:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 05:08:56] HOME_URL="https://www.centos.org/"
[2026-01-11 05:08:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 05:08:56] 
[2026-01-11 05:08:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 05:08:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 05:08:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 05:08:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 05:08:56] 
[2026-01-11 05:08:56] 2026-01-11 10:08:12,156 | INFO     | ***************************************
[2026-01-11 05:08:56] 2026-01-11 10:08:12,660 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 05:08:56] 2026-01-11 10:08:12,704 | INFO     | sufficient remaining disk space (72978792448 B)
[2026-01-11 05:08:56] 2026-01-11 10:08:12,704 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 05:08:56] 2026-01-11 10:08:12,705 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 05:08:56] 2026-01-11 10:08:12,705 | INFO     | update_server=False
[2026-01-11 05:08:56] 2026-01-11 10:08:12,705 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 05:08:56] 2026-01-11 10:08:12,705 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 05:08:56] 2026-01-11 10:08:12,839 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 05:08:56] 2026-01-11 10:08:12,839 | INFO     | aborting loop
[2026-01-11 05:08:56] 2026-01-11 10:08:13,050 | INFO     | all data control threads have been joined
[2026-01-11 05:08:56] 2026-01-11 10:08:13,182 | INFO     | all job control threads have been joined
[2026-01-11 05:08:56] 2026-01-11 10:08:13,473 | INFO     | all payload control threads have been joined
[2026-01-11 05:08:56] 2026-01-11 10:08:13,710 | INFO     | [job] retrieve thread has finished
[2026-01-11 05:08:56] 2026-01-11 10:08:13,772 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 05:08:56] 2026-01-11 10:08:13,772 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 05:08:56] 2026-01-11 10:08:13,841 | INFO     | [payload] validate_post thread has finished
[2026-01-11 05:08:56] 2026-01-11 10:08:13,847 | INFO     | [job] job monitor thread has finished
[2026-01-11 05:08:56] 2026-01-11 10:08:13,863 | INFO     | [payload] failed_post thread has finished
[2026-01-11 05:08:56] 2026-01-11 10:08:14,056 | INFO     | [data] control thread has finished
[2026-01-11 05:08:56] 2026-01-11 10:08:14,188 | INFO     | [job] control thread has finished
[2026-01-11 05:08:56] 2026-01-11 10:08:14,394 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 05:08:56] 2026-01-11 10:08:14,394 | INFO     | [job] validate thread has finished
[2026-01-11 05:08:56] 2026-01-11 10:08:14,394 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 05:08:56] 2026-01-11 10:08:14,479 | INFO     | [payload] control thread has finished
[2026-01-11 05:08:56] 2026-01-11 10:08:14,503 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 05:08:56] 2026-01-11 10:08:14,712 | INFO     | [data] copytool_out thread has finished
[2026-01-11 05:08:56] 2026-01-11 10:08:14,746 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 05:08:56] 2026-01-11 10:08:15,146 | INFO     | [data] copytool_in thread has finished
[2026-01-11 05:08:56] 2026-01-11 10:08:15,754 | INFO     | [job] queue monitor thread has finished
[2026-01-11 05:08:56] 2026-01-11 10:08:17,788 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 05:08:56] 2026-01-11 10:08:45,731 | INFO     | PID=634793 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 05:08:56] 2026-01-11 10:08:45,731 | INFO     | .. there are 16 such processes running
[2026-01-11 05:08:56] 2026-01-11 10:08:45,744 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 05:08:56] 2026-01-11 10:08:45,744 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 05:08:56] 2026-01-11 10:08:45,744 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 05:08:56] 2026-01-11 10:08:48,958 | INFO     | [monitor] cgroup control has ended
[2026-01-11 05:08:56] 2026-01-11 10:08:49,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140437263882048)>', '<ExcThread(monitor, started 140436899358464)>']
[2026-01-11 05:08:56] 2026-01-11 10:08:49,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 05:08:56] 2026-01-11 10:08:49,767 | INFO     | [monitor] control thread has ended
[2026-01-11 05:08:56] 2026-01-11 10:08:54,239 | INFO     | all workflow threads have been joined
[2026-01-11 05:08:56] 2026-01-11 10:08:54,239 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 05:08:56] 2026-01-11 10:08:54,239 | INFO     | traces error code: 0
[2026-01-11 05:08:56] 2026-01-11 10:08:54,239 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 05:08:56] 2026-01-11 10:08:55,335 [wrapper] ==== pilot stdout END ====
[2026-01-11 05:08:56] 2026-01-11 10:08:55,376 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 05:08:56] 2026-01-11 10:08:55,423 [wrapper] pilotpid: 634793
[2026-01-11 05:08:56] 2026-01-11 10:08:55,484 [wrapper] Pilot exit status: 0
[2026-01-11 05:08:56] 2026-01-11 10:08:55,642 [wrapper] pandaids: 6965941382
[2026-01-11 05:08:56] 2026-01-11 10:08:55,793 [wrapper] cleanup supervisor_pilot 1704895 634794
[2026-01-11 05:08:56] 2026-01-11 10:08:55,809 [wrapper] Test setup, not cleaning
[2026-01-11 05:08:56] 2026-01-11 10:08:55,830 [wrapper] apfmon messages muted
[2026-01-11 05:08:56] 2026-01-11 10:08:55,859 [wrapper] ==== wrapper stdout END ====
[2026-01-11 05:08:56] 2026-01-11 10:08:55,889 [wrapper] ==== wrapper stderr END ====
[2026-01-11 05:08:56]  *** Error codes and diagnostics ***
[2026-01-11 05:08:56]     "exeErrorCode": 0,
[2026-01-11 05:08:56]     "exeErrorDiag": "",
[2026-01-11 05:08:56]     "pilotErrorCode": 0,
[2026-01-11 05:08:56]     "pilotErrorDiag": "",
[2026-01-11 05:08:56]  *** Listing of results directory ***
[2026-01-11 05:08:56] total 1156020
[2026-01-11 05:08:56] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-11 05:08:56] -rwx------. 1 boincer umatlas     36322 Jan 10 22:33 runpilot2-wrapper.sh
[2026-01-11 05:08:56] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 22:33 queuedata.json
[2026-01-11 05:08:56] -rw-r--r--. 1 boincer umatlas       100 Jan 10 22:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 05:08:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 22:37 run_atlas
[2026-01-11 05:08:56] -rw-r--r--. 1 boincer umatlas       105 Jan 10 22:37 job.xml
[2026-01-11 05:08:56] -rw-r--r--. 2 boincer umatlas 915501182 Jan 10 22:37 EVNT.48039248._000028.pool.root.1
[2026-01-11 05:08:56] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:37 start_atlas.sh
[2026-01-11 05:08:56] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 22:37 shared
[2026-01-11 05:08:56] -rw-r--r--. 2 boincer umatlas    592418 Jan 10 22:37 input.tar.gz
[2026-01-11 05:08:56] -rw-r--r--. 1 boincer umatlas         0 Jan 10 22:37 boinc_lockfile
[2026-01-11 05:08:56] -rw-r--r--. 1 boincer umatlas      2591 Jan 10 22:37 pandaJob.out
[2026-01-11 05:08:56] -rw-------. 1 boincer umatlas        57 Jan 10 22:37 setup.sh.local
[2026-01-11 05:08:56] -rw-------. 1 boincer umatlas    989548 Jan 10 22:38 agis_schedconf.cvmfs.json
[2026-01-11 05:08:56] drwx------. 5 boincer umatlas      4096 Jan 10 22:38 pilot3
[2026-01-11 05:08:56] -rw-r--r--. 1 boincer umatlas      6842 Jan 11 05:00 init_data.xml
[2026-01-11 05:08:56] -rw-------. 1 boincer umatlas 257390181 Jan 11 05:05 HITS.48039250._006946.pool.root.1
[2026-01-11 05:08:56] -rw-r--r--. 1 boincer umatlas       532 Jan 11 05:05 boinc_task_state.xml
[2026-01-11 05:08:56] -rw-------. 1 boincer umatlas      1041 Jan 11 05:07 memory_monitor_summary.json
[2026-01-11 05:08:56] -rw-------. 1 boincer umatlas   1516240 Jan 11 05:07 agis_ddmendpoints.agis.ALL.json
[2026-01-11 05:08:56] -rw-------. 1 boincer umatlas    640969 Jan 11 05:07 log.48039250._006946.job.log.tgz.1
[2026-01-11 05:08:56] -rw-------. 1 boincer umatlas      7823 Jan 11 05:08 heartbeat.json
[2026-01-11 05:08:56] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 05:08 boinc_mmap_file
[2026-01-11 05:08:56] -rw-r--r--. 1 boincer umatlas        28 Jan 11 05:08 wrapper_checkpoint.txt
[2026-01-11 05:08:56] -rw-------. 1 boincer umatlas        95 Jan 11 05:08 pilot_heartbeat.json
[2026-01-11 05:08:56] -rw-------. 1 boincer umatlas      4823 Jan 11 05:08 pilotlog.txt
[2026-01-11 05:08:56] -rw-------. 1 boincer umatlas   2846218 Jan 11 05:08 log.48039250._006946.job.log.1
[2026-01-11 05:08:56] -rw-------. 1 boincer umatlas       357 Jan 11 05:08 output.list
[2026-01-11 05:08:56] -rw-r--r--. 1 boincer umatlas       620 Jan 11 05:08 runtime_log
[2026-01-11 05:08:56] -rw-------. 1 boincer umatlas   3502080 Jan 11 05:08 result.tar.gz
[2026-01-11 05:08:56] -rw-r--r--. 1 boincer umatlas      9350 Jan 11 05:08 runtime_log.err
[2026-01-11 05:08:56] -rw-------. 1 boincer umatlas       658 Jan 11 05:08 gE6MDmMO1y8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDhhKDmKqCaqn.diag
[2026-01-11 05:08:56] -rw-r--r--. 1 boincer umatlas      6964 Jan 11 05:08 stderr.txt
[2026-01-11 05:08:56] HITS file was successfully produced:
[2026-01-11 05:08:56] -rw-------. 1 boincer umatlas 257390181 Jan 11 05:05 shared/HITS.pool.root.1
[2026-01-11 05:08:56]  *** Contents of shared directory: ***
[2026-01-11 05:08:56] total 1149432
[2026-01-11 05:08:56] -rw-r--r--. 2 boincer umatlas 915501182 Jan 10 22:37 ATLAS.root_0
[2026-01-11 05:08:56] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:37 start_atlas.sh
[2026-01-11 05:08:56] -rw-r--r--. 2 boincer umatlas    592418 Jan 10 22:37 input.tar.gz
[2026-01-11 05:08:56] -rw-------. 1 boincer umatlas 257390181 Jan 11 05:05 HITS.pool.root.1
[2026-01-11 05:08:56] -rw-------. 1 boincer umatlas   3502080 Jan 11 05:08 result.tar.gz
05:08:58 (630407): run_atlas exited; CPU time 57407.232947
05:08:58 (630407): called boinc_finish(0)

</stderr_txt>
]]>

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