Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:37:29 (3822144): wrapper (7.7.26015): starting
22:37:29 (3822144): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 22:37:29] Arguments: --nthreads 8
[2026-01-10 22:37:29] Threads: 8
[2026-01-10 22:37:29] Checking for CVMFS
[2026-01-10 22:37:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 22:37:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 22:37:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 22:37:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 22:37:33] 2.13.3.0 12257 95710 687300 155002 1 394 22368638 32935937 43604 16776704 0 652894833 99.728 436441093 23209 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 22:37:33] CVMFS is ok
[2026-01-10 22:37:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 22:37:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 22:37:33] Further information can be found at the LHC@home message board.
[2026-01-10 22:37:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 22:37:33] Checking for apptainer binary...
[2026-01-10 22:37:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 22:37:33] Running /usr/bin/apptainer --version
[2026-01-10 22:37:33] apptainer version 1.4.5-2.el9
[2026-01-10 22:37:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 22:37:35] c-1-3.aglt2.org
[2026-01-10 22:37:35] apptainer works
[2026-01-10 22:37:35] Set ATHENA_PROC_NUMBER=8
[2026-01-10 22:37:35] Set ATHENA_CORE_NUMBER=8
[2026-01-10 22:37:35] Starting ATLAS job with PandaID=6965941370
[2026-01-10 22:37:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
04:28:46 (1019916): wrapper (7.7.26015): starting
04:28:46 (1019916): wrapper: running run_atlas (--nthreads 10)
[2026-01-11 04:28:46] Arguments: --nthreads 10
[2026-01-11 04:28:46] Threads: 10
[2026-01-11 04:28:46] This job has been restarted, cleaning up previous attempt
[2026-01-11 04:28:47] Checking for CVMFS
[2026-01-11 04:28:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 04:28:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 04:28:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 04:28:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 04:28:50] 2.13.3.0 12257 96061 682400 155011 3 65 24492295 32935936 44596 16776704 0 653827167 99.728 436933732 23188 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-11 04:28:50] CVMFS is ok
[2026-01-11 04:28:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 04:28:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 04:28:50] Further information can be found at the LHC@home message board.
[2026-01-11 04:28:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 04:28:50] Checking for apptainer binary...
[2026-01-11 04:28:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 04:28:50] Running /usr/bin/apptainer --version
[2026-01-11 04:28:50] apptainer version 1.4.5-2.el9
[2026-01-11 04:28:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 04:28:51] c-1-3.aglt2.org
[2026-01-11 04:28:51] apptainer works
[2026-01-11 04:28:51] Set ATHENA_PROC_NUMBER=10
[2026-01-11 04:28:51] Set ATHENA_CORE_NUMBER=10
[2026-01-11 04:28:51] Starting ATLAS job with PandaID=6965941370
[2026-01-11 04:28:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 13:21:06]  *** The last 200 lines of the pilot log: ***
[2026-01-11 13:21:07] 2026-01-11 18:20:01,996 | INFO     | monitor loop #1359: job 0:6965941370 is in state 'finished'
[2026-01-11 13:21:07] 2026-01-11 18:20:01,996 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 13:21:07] 2026-01-11 18:20:02,832 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 13:21:07] 2026-01-11 18:20:02,845 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 1671.3538749999993
[2026-01-11 13:21:07] 2026-01-11 18:20:02,872 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965941370/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 13:21:07] 2026-01-11 18:20:02,874 | INFO     | extracted standard info from prmon json
[2026-01-11 13:21:07] 2026-01-11 18:20:02,874 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 13:21:07] 2026-01-11 18:20:02,874 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 13:21:07] 2026-01-11 18:20:02,875 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 13:21:07] 2026-01-11 18:20:02,875 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 13:21:07] 2026-01-11 18:20:02,901 | INFO     | fitting pss+swap vs Time
[2026-01-11 13:21:07] 2026-01-11 18:20:02,903 | INFO     | sum of square deviations: 43098263247.64476
[2026-01-11 13:21:07] 2026-01-11 18:20:02,915 | INFO     | sum of deviations: 120010766187.49394
[2026-01-11 13:21:07] 2026-01-11 18:20:02,915 | INFO     | mean x: 1768139737.1544402
[2026-01-11 13:21:07] 2026-01-11 18:20:02,915 | INFO     | mean y: 2646598.893822394
[2026-01-11 13:21:07] 2026-01-11 18:20:02,915 | INFO     | intersect: -4920888332.506333
[2026-01-11 13:21:07] 2026-01-11 18:20:02,917 | INFO     | chi2: 4.288428925855869
[2026-01-11 13:21:07] 2026-01-11 18:20:02,918 | INFO     | sum of square deviations: 41862302565.30211
[2026-01-11 13:21:07] 2026-01-11 18:20:02,930 | INFO     | sum of deviations: 192525985823.62784
[2026-01-11 13:21:07] 2026-01-11 18:20:02,930 | INFO     | mean x: 1768139584.6588695
[2026-01-11 13:21:07] 2026-01-11 18:20:02,930 | INFO     | mean y: 2655494.3235867447
[2026-01-11 13:21:07] 2026-01-11 18:20:02,930 | INFO     | intersect: -8129071519.000868
[2026-01-11 13:21:07] 2026-01-11 18:20:02,932 | INFO     | chi2: 2.7585381142118766
[2026-01-11 13:21:07] 2026-01-11 18:20:02,932 | INFO     | current chi2=2.7585381142118766 (change=35.674855246403844 %)
[2026-01-11 13:21:07] 2026-01-11 18:20:02,934 | INFO     | sum of square deviations: 40650234088.110405
[2026-01-11 13:21:07] 2026-01-11 18:20:02,945 | INFO     | sum of deviations: 190263545218.61447
[2026-01-11 13:21:07] 2026-01-11 18:20:02,945 | INFO     | mean x: 1768139432.1653543
[2026-01-11 13:21:07] 2026-01-11 18:20:02,946 | INFO     | mean y: 2655209.6712598423
[2026-01-11 13:21:07] 2026-01-11 18:20:02,946 | INFO     | intersect: -8273126820.892837
[2026-01-11 13:21:07] 2026-01-11 18:20:02,947 | INFO     | chi2: 2.7588770920470727
[2026-01-11 13:21:07] 2026-01-11 18:20:02,947 | INFO     | current chi2=2.7588770920470727 (change=-0.012288314359323042 %)
[2026-01-11 13:21:07] 2026-01-11 18:20:02,948 | INFO     | right removable region: 507
[2026-01-11 13:21:07] 2026-01-11 18:20:02,949 | INFO     | sum of square deviations: 41862127372.98243
[2026-01-11 13:21:07] 2026-01-11 18:20:02,961 | INFO     | sum of deviations: -15584004540.608208
[2026-01-11 13:21:07] 2026-01-11 18:20:02,961 | INFO     | mean x: 1768139889.6608188
[2026-01-11 13:21:07] 2026-01-11 18:20:02,962 | INFO     | mean y: 2663293.3528265106
[2026-01-11 13:21:07] 2026-01-11 18:20:02,962 | INFO     | intersect: 660888323.901282
[2026-01-11 13:21:07] 2026-01-11 18:20:02,963 | INFO     | chi2: 1.8575931972532964
[2026-01-11 13:21:07] 2026-01-11 18:20:02,963 | INFO     | current chi2=1.8575931972532964 (change=56.68359603552099 %)
[2026-01-11 13:21:07] 2026-01-11 18:20:02,965 | INFO     | sum of square deviations: 40649852410.777435
[2026-01-11 13:21:07] 2026-01-11 18:20:02,976 | INFO     | sum of deviations: -54988227048.27363
[2026-01-11 13:21:07] 2026-01-11 18:20:02,977 | INFO     | mean x: 1768140042.1673229
[2026-01-11 13:21:07] 2026-01-11 18:20:02,977 | INFO     | mean y: 2668242.320866142
[2026-01-11 13:21:07] 2026-01-11 18:20:02,977 | INFO     | intersect: 2394482242.2669826
[2026-01-11 13:21:07] 2026-01-11 18:20:02,978 | INFO     | chi2: 1.66239976421793
[2026-01-11 13:21:07] 2026-01-11 18:20:02,979 | INFO     | current chi2=1.66239976421793 (change=10.507867563467952 %)
[2026-01-11 13:21:07] 2026-01-11 18:20:02,979 | INFO     | left removable region: 20
[2026-01-11 13:21:07] 2026-01-11 18:20:02,980 | INFO     | sum of square deviations: 35814215262.38639
[2026-01-11 13:21:07] 2026-01-11 18:20:02,991 | INFO     | sum of deviations: 11196482272.657072
[2026-01-11 13:21:07] 2026-01-11 18:20:02,991 | INFO     | mean x: 1768140011.677618
[2026-01-11 13:21:07] 2026-01-11 18:20:02,991 | INFO     | mean y: 2678221.8767967145
[2026-01-11 13:21:07] 2026-01-11 18:20:02,991 | INFO     | intersect: -550089670.7402925
[2026-01-11 13:21:07] 2026-01-11 18:20:02,993 | INFO     | chi2: 0.06086546590242935
[2026-01-11 13:21:07] 2026-01-11 18:20:02,993 | INFO     | current memory leak: 0.31 B/s (using 487 data points, chi2=0.06)
[2026-01-11 13:21:07] 2026-01-11 18:20:02,994 | INFO     | could have reported an average CPU frequency of 1720 MHz (21 samples)
[2026-01-11 13:21:07] 2026-01-11 18:20:02,995 | INFO     | ..............................
[2026-01-11 13:21:07] 2026-01-11 18:20:02,995 | INFO     | . Timing measurements:
[2026-01-11 13:21:07] 2026-01-11 18:20:02,995 | INFO     | . get job = 0 s
[2026-01-11 13:21:07] 2026-01-11 18:20:02,995 | INFO     | . initial setup = 3 s
[2026-01-11 13:21:07] 2026-01-11 18:20:02,995 | INFO     | . payload setup = 45 s
[2026-01-11 13:21:07] 2026-01-11 18:20:02,995 | INFO     | . stage-in = 0 s
[2026-01-11 13:21:07] 2026-01-11 18:20:02,996 | INFO     | . payload execution = 31625 s
[2026-01-11 13:21:07] 2026-01-11 18:20:02,996 | INFO     | . stage-out = 6 s
[2026-01-11 13:21:07] 2026-01-11 18:20:02,996 | INFO     | . log creation = 1 s
[2026-01-11 13:21:07] 2026-01-11 18:20:02,996 | INFO     | ..............................
[2026-01-11 13:21:07] 2026-01-11 18:20:03,300 | INFO     | 
[2026-01-11 13:21:07] 2026-01-11 18:20:03,305 | INFO     | job summary report
[2026-01-11 13:21:07] 2026-01-11 18:20:03,305 | INFO     | --------------------------------------------------
[2026-01-11 13:21:07] 2026-01-11 18:20:03,305 | INFO     | PanDA job id: 6965941370
[2026-01-11 13:21:07] 2026-01-11 18:20:03,305 | INFO     | task id: 48039250
[2026-01-11 13:21:07] 2026-01-11 18:20:03,305 | INFO     | errors: (none)
[2026-01-11 13:21:07] 2026-01-11 18:20:03,305 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 13:21:07] 2026-01-11 18:20:03,306 | INFO     | pilot state: finished 
[2026-01-11 13:21:07] 2026-01-11 18:20:03,306 | INFO     | transexitcode: 0
[2026-01-11 13:21:07] 2026-01-11 18:20:03,306 | INFO     | exeerrorcode: 0
[2026-01-11 13:21:07] 2026-01-11 18:20:03,306 | INFO     | exeerrordiag: 
[2026-01-11 13:21:07] 2026-01-11 18:20:03,306 | INFO     | exitcode: 0
[2026-01-11 13:21:07] 2026-01-11 18:20:03,306 | INFO     | exitmsg: OK
[2026-01-11 13:21:07] 2026-01-11 18:20:03,306 | INFO     | cpuconsumptiontime: 97930 s
[2026-01-11 13:21:07] 2026-01-11 18:20:03,306 | INFO     | nevents: 400
[2026-01-11 13:21:07] 2026-01-11 18:20:03,307 | INFO     | neventsw: 0
[2026-01-11 13:21:07] 2026-01-11 18:20:03,307 | INFO     | pid: 1061544
[2026-01-11 13:21:07] 2026-01-11 18:20:03,307 | INFO     | pgrp: 1061544
[2026-01-11 13:21:07] 2026-01-11 18:20:03,307 | INFO     | corecount: 10
[2026-01-11 13:21:07] 2026-01-11 18:20:03,307 | INFO     | event service: False
[2026-01-11 13:21:07] 2026-01-11 18:20:03,307 | INFO     | sizes: {0: 2283852, 1: 2283880, 2: 2284051, 3: 2284079, 14: 2284107, 26: 2284135, 37: 2284553, 48: 2284581, 31677: 2321599, 31684: 2330597, 31685: 2330653, 31720: 
[2026-01-11 13:21:07] 2026-01-11 18:20:03,307 | INFO     | --------------------------------------------------
[2026-01-11 13:21:07] 2026-01-11 18:20:03,307 | INFO     | 
[2026-01-11 13:21:07] 2026-01-11 18:20:03,308 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-11 13:21:07] 2026-01-11 18:20:03,400 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 13:21:07] 2026-01-11 18:20:03,401 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 13:21:07] 2026-01-11 18:20:03,401 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 13:21:07] 2026-01-11 18:20:03,401 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 13:21:07] 2026-01-11 18:20:03,401 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 13:21:07] 2026-01-11 18:20:03,402 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 13:21:07] 2026-01-11 18:20:03,402 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 13:21:07] 2026-01-11 18:20:03,402 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 13:21:07] 2026-01-11 18:20:03,402 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 13:21:07] 2026-01-11 18:20:03,402 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 13:21:07] 2026-01-11 18:20:03,402 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 13:21:07] 2026-01-11 18:20:03,403 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 13:21:07] 2026-01-11 18:20:03,403 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 13:21:07] 2026-01-11 18:20:03,403 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 13:21:07] 2026-01-11 18:20:03,403 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 13:21:07] 2026-01-11 18:20:03,403 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 13:21:07] 2026-01-11 18:20:03,403 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 13:21:07] 2026-01-11 18:20:03,410 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 13:21:07] 2026-01-11 18:20:03,410 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 13:21:07] 2026-01-11 18:20:03,410 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 13:21:07] 2026-01-11 18:20:03,411 | INFO     | job 6965941370 has completed (purged errors)
[2026-01-11 13:21:07] 2026-01-11 18:20:03,411 | INFO     | overall cleanup function is called
[2026-01-11 13:21:07] 2026-01-11 18:20:04,429 | INFO     | --- collectZombieJob: --- 10, [1061544]
[2026-01-11 13:21:07] 2026-01-11 18:20:04,429 | INFO     | zombie collector waiting for pid 1061544
[2026-01-11 13:21:07] 2026-01-11 18:20:04,429 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 13:21:07] 2026-01-11 18:20:04,430 | INFO     | collected zombie processes
[2026-01-11 13:21:07] 2026-01-11 18:20:04,430 | INFO     | will attempt to kill all subprocesses of pid=1061544
[2026-01-11 13:21:07] 2026-01-11 18:20:06,440 | INFO     | process IDs to be killed: [1061544] (in reverse order)
[2026-01-11 13:21:07] 2026-01-11 18:20:07,019 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 13:21:07] 2026-01-11 18:20:07,020 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 13:21:07] 2026-01-11 18:20:07,133 | INFO     | did not find any defunct processes belonging to 1061544
[2026-01-11 13:21:07] 2026-01-11 18:20:07,274 | INFO     | did not find any defunct processes belonging to 1061544
[2026-01-11 13:21:07] 2026-01-11 18:20:07,274 | INFO     | ready for new job
[2026-01-11 13:21:07] 2026-01-11 18:20:07,274 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 13:21:07] 2026-01-11 18:20:07,282 | INFO     | ***************************************
[2026-01-11 13:21:07] 2026-01-11 18:20:07,282 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 13:21:07] 2026-01-11 18:20:07,282 | INFO     | ***************************************
[2026-01-11 13:21:07] 2026-01-11 18:20:07,283 | INFO     | 
[2026-01-11 13:21:07] 2026-01-11 18:20:07,318 | INFO     | architecture information:
[2026-01-11 13:21:07] 2026-01-11 18:20:07,342 | INFO     | executing command: cat /etc/os-release
[2026-01-11 13:21:07] 2026-01-11 18:20:07,424 | INFO     | cat /etc/os-release:
[2026-01-11 13:21:07] NAME="CentOS Linux"
[2026-01-11 13:21:07] VERSION="7 (Core)"
[2026-01-11 13:21:07] ID="centos"
[2026-01-11 13:21:07] ID_LIKE="rhel fedora"
[2026-01-11 13:21:07] VERSION_ID="7"
[2026-01-11 13:21:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 13:21:07] ANSI_COLOR="0;31"
[2026-01-11 13:21:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 13:21:07] HOME_URL="https://www.centos.org/"
[2026-01-11 13:21:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 13:21:07] 
[2026-01-11 13:21:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 13:21:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 13:21:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 13:21:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 13:21:07] 
[2026-01-11 13:21:07] 2026-01-11 18:20:07,424 | INFO     | ***************************************
[2026-01-11 13:21:07] 2026-01-11 18:20:07,927 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-11 13:21:07] 2026-01-11 18:20:07,997 | INFO     | sufficient remaining disk space (72916926464 B)
[2026-01-11 13:21:07] 2026-01-11 18:20:07,998 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 13:21:07] 2026-01-11 18:20:07,998 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 13:21:07] 2026-01-11 18:20:07,998 | INFO     | update_server=False
[2026-01-11 13:21:07] 2026-01-11 18:20:07,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 13:21:07] 2026-01-11 18:20:07,999 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 13:21:07] 2026-01-11 18:20:08,054 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 13:21:07] 2026-01-11 18:20:08,054 | INFO     | aborting loop
[2026-01-11 13:21:07] 2026-01-11 18:20:08,071 | INFO     | all data control threads have been joined
[2026-01-11 13:21:07] 2026-01-11 18:20:08,073 | INFO     | all job control threads have been joined
[2026-01-11 13:21:07] 2026-01-11 18:20:08,386 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 13:21:07] 2026-01-11 18:20:09,005 | INFO     | [job] retrieve thread has finished
[2026-01-11 13:21:07] 2026-01-11 18:20:09,006 | INFO     | all payload control threads have been joined
[2026-01-11 13:21:07] 2026-01-11 18:20:09,060 | INFO     | [job] job monitor thread has finished
[2026-01-11 13:21:07] 2026-01-11 18:20:09,066 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 13:21:07] 2026-01-11 18:20:09,078 | INFO     | [data] control thread has finished
[2026-01-11 13:21:07] 2026-01-11 18:20:09,085 | INFO     | [job] control thread has finished
[2026-01-11 13:21:07] 2026-01-11 18:20:09,111 | INFO     | [data] copytool_in thread has finished
[2026-01-11 13:21:07] 2026-01-11 18:20:09,398 | INFO     | [job] queue monitor thread has finished
[2026-01-11 13:21:07] 2026-01-11 18:20:09,668 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 13:21:07] 2026-01-11 18:20:09,669 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 13:21:07] 2026-01-11 18:20:09,784 | INFO     | [payload] validate_post thread has finished
[2026-01-11 13:21:07] 2026-01-11 18:20:09,877 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 13:21:07] 2026-01-11 18:20:10,006 | INFO     | [data] copytool_out thread has finished
[2026-01-11 13:21:07] 2026-01-11 18:20:10,012 | INFO     | [payload] control thread has finished
[2026-01-11 13:21:07] 2026-01-11 18:20:10,360 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 13:21:07] 2026-01-11 18:20:10,490 | INFO     | [job] validate thread has finished
[2026-01-11 13:21:07] 2026-01-11 18:20:10,529 | INFO     | [payload] failed_post thread has finished
[2026-01-11 13:21:07] 2026-01-11 18:20:13,890 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 13:21:07] 2026-01-11 18:20:38,008 | INFO     | PID=1033947 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 13:21:07] 2026-01-11 18:20:38,008 | INFO     | .. there are 75 such processes running
[2026-01-11 13:21:07] 2026-01-11 18:20:38,009 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 13:21:07] 2026-01-11 18:20:38,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 13:21:07] 2026-01-11 18:20:38,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 13:21:07] 2026-01-11 18:20:59,298 | INFO     | [monitor] cgroup control has ended
[2026-01-11 13:21:07] 2026-01-11 18:21:00,043 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140574113544000)>', '<ExcThread(monitor, started 140573759477504)>']
[2026-01-11 13:21:07] 2026-01-11 18:21:00,197 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 13:21:07] 2026-01-11 18:21:00,197 | INFO     | [monitor] control thread has ended
[2026-01-11 13:21:07] 2026-01-11 18:21:05,069 | INFO     | all workflow threads have been joined
[2026-01-11 13:21:07] 2026-01-11 18:21:05,069 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 13:21:07] 2026-01-11 18:21:05,070 | INFO     | traces error code: 0
[2026-01-11 13:21:07] 2026-01-11 18:21:05,070 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 13:21:07] 2026-01-11 18:21:05,884 [wrapper] ==== pilot stdout END ====
[2026-01-11 13:21:07] 2026-01-11 18:21:05,888 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 13:21:07] 2026-01-11 18:21:05,903 [wrapper] pilotpid: 1033947
[2026-01-11 13:21:07] 2026-01-11 18:21:05,931 [wrapper] Pilot exit status: 0
[2026-01-11 13:21:07] 2026-01-11 18:21:06,007 [wrapper] pandaids: 6965941370 6965941370
[2026-01-11 13:21:07] 2026-01-11 18:21:06,457 [wrapper] cleanup supervisor_pilot 3643795 1033948
[2026-01-11 13:21:07] 2026-01-11 18:21:06,463 [wrapper] Test setup, not cleaning
[2026-01-11 13:21:07] 2026-01-11 18:21:06,467 [wrapper] apfmon messages muted
[2026-01-11 13:21:07] 2026-01-11 18:21:06,471 [wrapper] ==== wrapper stdout END ====
[2026-01-11 13:21:07] 2026-01-11 18:21:06,475 [wrapper] ==== wrapper stderr END ====
[2026-01-11 13:21:07]  *** Error codes and diagnostics ***
[2026-01-11 13:21:07]     "exeErrorCode": 0,
[2026-01-11 13:21:07]     "exeErrorDiag": "",
[2026-01-11 13:21:07]     "pilotErrorCode": 0,
[2026-01-11 13:21:07]     "pilotErrorDiag": "",
[2026-01-11 13:21:07]  *** Listing of results directory ***
[2026-01-11 13:21:07] total 2049868
[2026-01-11 13:21:07] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-11 13:21:07] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-11 13:21:07] -rwx------. 1 boincer umatlas     36322 Jan 10 22:33 runpilot2-wrapper.sh
[2026-01-11 13:21:07] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 22:33 queuedata.json
[2026-01-11 13:21:07] -rw-r--r--. 1 boincer umatlas       100 Jan 10 22:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 13:21:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 22:37 run_atlas
[2026-01-11 13:21:07] -rw-r--r--. 1 boincer umatlas       105 Jan 10 22:37 job.xml
[2026-01-11 13:21:07] -rw-r--r--. 3 boincer umatlas 915501182 Jan 10 22:37 EVNT.48039248._000028.pool.root.1
[2026-01-11 13:21:07] -rw-r--r--. 3 boincer umatlas 915501182 Jan 10 22:37 ATLAS.root_0
[2026-01-11 13:21:07] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:37 start_atlas.sh
[2026-01-11 13:21:07] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 22:37 shared
[2026-01-11 13:21:07] -rw-r--r--. 2 boincer umatlas    592419 Jan 10 22:37 input.tar.gz
[2026-01-11 13:21:07] -rw-r--r--. 1 boincer umatlas         0 Jan 10 22:37 boinc_lockfile
[2026-01-11 13:21:07] -rw-r--r--. 1 boincer umatlas      2590 Jan 11 04:28 pandaJob.out
[2026-01-11 13:21:07] -rw-------. 1 boincer umatlas        57 Jan 11 04:28 setup.sh.local
[2026-01-11 13:21:07] -rw-------. 1 boincer umatlas    989548 Jan 11 04:29 agis_schedconf.cvmfs.json
[2026-01-11 13:21:07] -rw-------. 1 boincer umatlas 256472960 Jan 11 13:17 HITS.48039250._006934.pool.root.1
[2026-01-11 13:21:07] -rw-r--r--. 1 boincer umatlas       533 Jan 11 13:17 boinc_task_state.xml
[2026-01-11 13:21:07] -rw-------. 1 boincer umatlas      1042 Jan 11 13:19 memory_monitor_summary.json
[2026-01-11 13:21:07] -rw-------. 1 boincer umatlas   1516240 Jan 11 13:19 agis_ddmendpoints.agis.ALL.json
[2026-01-11 13:21:07] -rw-------. 1 boincer umatlas    654918 Jan 11 13:19 log.48039250._006934.job.log.tgz.1
[2026-01-11 13:21:07] -rw-r--r--. 1 boincer umatlas      6841 Jan 11 13:19 init_data.xml
[2026-01-11 13:21:07] -rw-------. 1 boincer umatlas      7815 Jan 11 13:20 heartbeat.json
[2026-01-11 13:21:07] -rw-------. 1 boincer umatlas        96 Jan 11 13:20 pilot_heartbeat.json
[2026-01-11 13:21:07] -rw-------. 1 boincer umatlas      4824 Jan 11 13:21 pilotlog.txt
[2026-01-11 13:21:07] -rw-r--r--. 1 boincer umatlas        29 Jan 11 13:21 wrapper_checkpoint.txt
[2026-01-11 13:21:07] -rw-------. 1 boincer umatlas   3176215 Jan 11 13:21 log.48039250._006934.job.log.1
[2026-01-11 13:21:07] -rw-------. 1 boincer umatlas       357 Jan 11 13:21 output.list
[2026-01-11 13:21:07] -rw-r--r--. 1 boincer umatlas       620 Jan 11 13:21 runtime_log
[2026-01-11 13:21:07] -rw-------. 1 boincer umatlas   3850240 Jan 11 13:21 result.tar.gz
[2026-01-11 13:21:07] -rw-r--r--. 1 boincer umatlas      9415 Jan 11 13:21 runtime_log.err
[2026-01-11 13:21:07] -rw-------. 1 boincer umatlas       782 Jan 11 13:21 G6aMDmMO1y8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1ghKDmALLUvn.diag
[2026-01-11 13:21:07] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 13:21 boinc_mmap_file
[2026-01-11 13:21:07] -rw-r--r--. 1 boincer umatlas     23415 Jan 11 13:21 stderr.txt
[2026-01-11 13:21:07] HITS file was successfully produced:
[2026-01-11 13:21:07] -rw-------. 1 boincer umatlas 256472960 Jan 11 13:17 shared/HITS.pool.root.1
[2026-01-11 13:21:07]  *** Contents of shared directory: ***
[2026-01-11 13:21:07] total 1148876
[2026-01-11 13:21:07] -rw-r--r--. 3 boincer umatlas 915501182 Jan 10 22:37 ATLAS.root_0
[2026-01-11 13:21:07] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:37 start_atlas.sh
[2026-01-11 13:21:07] -rw-r--r--. 2 boincer umatlas    592419 Jan 10 22:37 input.tar.gz
[2026-01-11 13:21:07] -rw-------. 1 boincer umatlas 256472960 Jan 11 13:17 HITS.pool.root.1
[2026-01-11 13:21:07] -rw-------. 1 boincer umatlas   3850240 Jan 11 13:21 result.tar.gz
13:21:08 (1019916): run_atlas exited; CPU time 100350.870423
13:21:08 (1019916): called boinc_finish(0)

</stderr_txt>
]]>

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