Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:09 (2421899): wrapper (7.7.26015): starting
00:01:09 (2421899): wrapper: running run_atlas (--nthreads 12)
[2026-01-11 00:01:09] Arguments: --nthreads 12
[2026-01-11 00:01:09] Threads: 12
[2026-01-11 00:01:09] Checking for CVMFS
[2026-01-11 00:01:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 00:01:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 00:01:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 00:01:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 00:01:13] 2.13.3.0 10228 26490 194620 155004 2 145 30337999 32935937 19605 16776704 0 111467674 99.840 62664367 32921 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-11 00:01:13] CVMFS is ok
[2026-01-11 00:01:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 00:01:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 00:01:13] Further information can be found at the LHC@home message board.
[2026-01-11 00:01:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 00:01:13] Checking for apptainer binary...
[2026-01-11 00:01:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 00:01:13] Running /usr/bin/apptainer --version
[2026-01-11 00:01:13] apptainer version 1.4.5-2.el9
[2026-01-11 00:01:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 00:01:15] c-8-1.aglt2.org
[2026-01-11 00:01:15] apptainer works
[2026-01-11 00:01:15] Set ATHENA_PROC_NUMBER=12
[2026-01-11 00:01:15] Set ATHENA_CORE_NUMBER=12
[2026-01-11 00:01:15] Starting ATLAS job with PandaID=6965941695
[2026-01-11 00:01:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 13:54:04]  *** The last 200 lines of the pilot log: ***
[2026-01-11 13:54:04] 2026-01-11 18:53:07,864 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 13:54:04] 2026-01-11 18:53:07,864 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 13:54:04] 2026-01-11 18:53:07,865 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 13:54:04] 2026-01-11 18:53:07,880 | INFO     | fitting pss+swap vs Time
[2026-01-11 13:54:04] 2026-01-11 18:53:07,881 | INFO     | sum of square deviations: 166010046678.79318
[2026-01-11 13:54:04] 2026-01-11 18:53:07,898 | INFO     | sum of deviations: 1283796905818.0352
[2026-01-11 13:54:04] 2026-01-11 18:53:07,898 | INFO     | mean x: 1768132804.189655
[2026-01-11 13:54:04] 2026-01-11 18:53:07,898 | INFO     | mean y: 2720872.8374384237
[2026-01-11 13:54:04] 2026-01-11 18:53:07,898 | INFO     | intersect: -13670689071.35731
[2026-01-11 13:54:04] 2026-01-11 18:53:07,899 | INFO     | chi2: 9.543077951366598
[2026-01-11 13:54:04] 2026-01-11 18:53:07,901 | INFO     | sum of square deviations: 162962488801.82895
[2026-01-11 13:54:04] 2026-01-11 18:53:07,916 | INFO     | sum of deviations: 1330062906704.7854
[2026-01-11 13:54:04] 2026-01-11 18:53:07,917 | INFO     | mean x: 1768132651.6988847
[2026-01-11 13:54:04] 2026-01-11 18:53:07,917 | INFO     | mean y: 2723173.6493184636
[2026-01-11 13:54:04] 2026-01-11 18:53:07,917 | INFO     | intersect: -14428374875.043863
[2026-01-11 13:54:04] 2026-01-11 18:53:07,918 | INFO     | chi2: 8.848867851056962
[2026-01-11 13:54:04] 2026-01-11 18:53:07,918 | INFO     | current chi2=8.848867851056962 (change=7.274488418175638 %)
[2026-01-11 13:54:04] 2026-01-11 18:53:07,918 | INFO     | right removable region: 806
[2026-01-11 13:54:04] 2026-01-11 18:53:07,919 | INFO     | sum of square deviations: 162961701289.42993
[2026-01-11 13:54:04] 2026-01-11 18:53:07,936 | INFO     | sum of deviations: 997981205609.6079
[2026-01-11 13:54:04] 2026-01-11 18:53:07,936 | INFO     | mean x: 1768132956.700124
[2026-01-11 13:54:04] 2026-01-11 18:53:07,936 | INFO     | mean y: 2735165.915737299
[2026-01-11 13:54:04] 2026-01-11 18:53:07,936 | INFO     | intersect: -10825351714.88884
[2026-01-11 13:54:04] 2026-01-11 18:53:07,937 | INFO     | chi2: 5.738368107433616
[2026-01-11 13:54:04] 2026-01-11 18:53:07,937 | INFO     | current chi2=5.738368107433616 (change=39.86879142476391 %)
[2026-01-11 13:54:04] 2026-01-11 18:53:07,938 | INFO     | sum of square deviations: 159950940838.80798
[2026-01-11 13:54:04] 2026-01-11 18:53:07,959 | INFO     | sum of deviations: 772650064006.7219
[2026-01-11 13:54:04] 2026-01-11 18:53:07,959 | INFO     | mean x: 1768133109.2094762
[2026-01-11 13:54:04] 2026-01-11 18:53:07,959 | INFO     | mean y: 2746580.668329177
[2026-01-11 13:54:04] 2026-01-11 18:53:07,960 | INFO     | intersect: -8538298272.452318
[2026-01-11 13:54:04] 2026-01-11 18:53:07,961 | INFO     | chi2: 3.510366106825905
[2026-01-11 13:54:04] 2026-01-11 18:53:07,961 | INFO     | current chi2=3.510366106825905 (change=38.82640428245628 %)
[2026-01-11 13:54:04] 2026-01-11 18:53:07,962 | INFO     | sum of square deviations: 156977629820.34607
[2026-01-11 13:54:04] 2026-01-11 18:53:07,989 | INFO     | sum of deviations: 590328341619.6528
[2026-01-11 13:54:04] 2026-01-11 18:53:07,989 | INFO     | mean x: 1768133261.7151818
[2026-01-11 13:54:04] 2026-01-11 18:53:07,989 | INFO     | mean y: 2755927.086574655
[2026-01-11 13:54:04] 2026-01-11 18:53:07,989 | INFO     | intersect: -6646466496.168445
[2026-01-11 13:54:04] 2026-01-11 18:53:07,990 | INFO     | chi2: 2.0559850352188764
[2026-01-11 13:54:04] 2026-01-11 18:53:07,991 | INFO     | current chi2=2.0559850352188764 (change=41.43103674511286 %)
[2026-01-11 13:54:04] 2026-01-11 18:53:07,992 | INFO     | sum of square deviations: 154041535240.64682
[2026-01-11 13:54:04] 2026-01-11 18:53:08,017 | INFO     | sum of deviations: 489675236411.08716
[2026-01-11 13:54:04] 2026-01-11 18:53:08,018 | INFO     | mean x: 1768133414.2171717
[2026-01-11 13:54:04] 2026-01-11 18:53:08,018 | INFO     | mean y: 2761154.993686869
[2026-01-11 13:54:04] 2026-01-11 18:53:08,018 | INFO     | intersect: -5617873216.512339
[2026-01-11 13:54:04] 2026-01-11 18:53:08,019 | INFO     | chi2: 1.6587023451887073
[2026-01-11 13:54:04] 2026-01-11 18:53:08,023 | INFO     | current chi2=1.6587023451887073 (change=19.323228682346667 %)
[2026-01-11 13:54:04] 2026-01-11 18:53:08,024 | INFO     | left removable region: 40
[2026-01-11 13:54:04] 2026-01-11 18:53:08,025 | INFO     | sum of square deviations: 139362809076.31973
[2026-01-11 13:54:04] 2026-01-11 18:53:08,046 | INFO     | sum of deviations: 273164987600.77115
[2026-01-11 13:54:04] 2026-01-11 18:53:08,046 | INFO     | mean x: 1768133841.2415144
[2026-01-11 13:54:04] 2026-01-11 18:53:08,046 | INFO     | mean y: 2778106.541775457
[2026-01-11 13:54:04] 2026-01-11 18:53:08,046 | INFO     | intersect: -3462940344.6035333
[2026-01-11 13:54:04] 2026-01-11 18:53:08,047 | INFO     | chi2: 0.20642773840295303
[2026-01-11 13:54:04] 2026-01-11 18:53:08,047 | INFO     | current memory leak: 1.96 B/s (using 766 data points, chi2=0.21)
[2026-01-11 13:54:04] 2026-01-11 18:53:08,048 | INFO     | could have reported an average CPU frequency of 2600 MHz (30 samples)
[2026-01-11 13:54:04] 2026-01-11 18:53:08,049 | INFO     | ..............................
[2026-01-11 13:54:04] 2026-01-11 18:53:08,049 | INFO     | . Timing measurements:
[2026-01-11 13:54:04] 2026-01-11 18:53:08,049 | INFO     | . get job = 1 s
[2026-01-11 13:54:04] 2026-01-11 18:53:08,049 | INFO     | . initial setup = 14 s
[2026-01-11 13:54:04] 2026-01-11 18:53:08,049 | INFO     | . payload setup = 78 s
[2026-01-11 13:54:04] 2026-01-11 18:53:08,049 | INFO     | . stage-in = 0 s
[2026-01-11 13:54:04] 2026-01-11 18:53:08,049 | INFO     | . payload execution = 49538 s
[2026-01-11 13:54:04] 2026-01-11 18:53:08,049 | INFO     | . stage-out = 5 s
[2026-01-11 13:54:04] 2026-01-11 18:53:08,050 | INFO     | . log creation = 1 s
[2026-01-11 13:54:04] 2026-01-11 18:53:08,050 | INFO     | ..............................
[2026-01-11 13:54:04] 2026-01-11 18:53:08,158 | INFO     | 
[2026-01-11 13:54:04] 2026-01-11 18:53:08,159 | INFO     | job summary report
[2026-01-11 13:54:04] 2026-01-11 18:53:08,159 | INFO     | --------------------------------------------------
[2026-01-11 13:54:04] 2026-01-11 18:53:08,159 | INFO     | PanDA job id: 6965941695
[2026-01-11 13:54:04] 2026-01-11 18:53:08,159 | INFO     | task id: 48039250
[2026-01-11 13:54:04] 2026-01-11 18:53:08,159 | INFO     | errors: (none)
[2026-01-11 13:54:04] 2026-01-11 18:53:08,159 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 13:54:04] 2026-01-11 18:53:08,159 | INFO     | pilot state: finished 
[2026-01-11 13:54:04] 2026-01-11 18:53:08,159 | INFO     | transexitcode: 0
[2026-01-11 13:54:04] 2026-01-11 18:53:08,159 | INFO     | exeerrorcode: 0
[2026-01-11 13:54:04] 2026-01-11 18:53:08,159 | INFO     | exeerrordiag: 
[2026-01-11 13:54:04] 2026-01-11 18:53:08,160 | INFO     | exitcode: 0
[2026-01-11 13:54:04] 2026-01-11 18:53:08,160 | INFO     | exitmsg: OK
[2026-01-11 13:54:04] 2026-01-11 18:53:08,160 | INFO     | cpuconsumptiontime: 72940 s
[2026-01-11 13:54:04] 2026-01-11 18:53:08,160 | INFO     | nevents: 400
[2026-01-11 13:54:04] 2026-01-11 18:53:08,160 | INFO     | neventsw: 0
[2026-01-11 13:54:04] 2026-01-11 18:53:08,160 | INFO     | pid: 2440356
[2026-01-11 13:54:04] 2026-01-11 18:53:08,160 | INFO     | pgrp: 2440356
[2026-01-11 13:54:04] 2026-01-11 18:53:08,160 | INFO     | corecount: 12
[2026-01-11 13:54:04] 2026-01-11 18:53:08,161 | INFO     | event service: False
[2026-01-11 13:54:04] 2026-01-11 18:53:08,161 | INFO     | sizes: {0: 2283200, 2: 2283801, 3: 2283885, 4: 2283913, 5: 2284112, 6: 2284168, 8: 2284324, 19: 2284352, 30: 2284380, 42: 2284408, 54: 2284464, 61: 2285034, 66: 22
[2026-01-11 13:54:04] 2026-01-11 18:53:08,161 | INFO     | --------------------------------------------------
[2026-01-11 13:54:04] 2026-01-11 18:53:08,161 | INFO     | 
[2026-01-11 13:54:04] 2026-01-11 18:53:08,161 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-11 13:54:04] 2026-01-11 18:53:08,252 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 13:54:04] 2026-01-11 18:53:08,252 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 13:54:04] 2026-01-11 18:53:08,252 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 13:54:04] 2026-01-11 18:53:08,252 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 13:54:04] 2026-01-11 18:53:08,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 13:54:04] 2026-01-11 18:53:08,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 13:54:04] 2026-01-11 18:53:08,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 13:54:04] 2026-01-11 18:53:08,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 13:54:04] 2026-01-11 18:53:08,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 13:54:04] 2026-01-11 18:53:08,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 13:54:04] 2026-01-11 18:53:08,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 13:54:04] 2026-01-11 18:53:08,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 13:54:04] 2026-01-11 18:53:08,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 13:54:04] 2026-01-11 18:53:08,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 13:54:04] 2026-01-11 18:53:08,254 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 13:54:04] 2026-01-11 18:53:08,254 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 13:54:04] 2026-01-11 18:53:08,254 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 13:54:04] 2026-01-11 18:53:08,254 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 13:54:04] 2026-01-11 18:53:08,254 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 13:54:04] 2026-01-11 18:53:08,254 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 13:54:04] 2026-01-11 18:53:08,254 | INFO     | job 6965941695 has completed (purged errors)
[2026-01-11 13:54:04] 2026-01-11 18:53:08,254 | INFO     | overall cleanup function is called
[2026-01-11 13:54:04] 2026-01-11 18:53:09,302 | INFO     | --- collectZombieJob: --- 10, [2440356]
[2026-01-11 13:54:04] 2026-01-11 18:53:09,303 | INFO     | zombie collector waiting for pid 2440356
[2026-01-11 13:54:04] 2026-01-11 18:53:09,303 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 13:54:04] 2026-01-11 18:53:09,303 | INFO     | collected zombie processes
[2026-01-11 13:54:04] 2026-01-11 18:53:09,303 | INFO     | will attempt to kill all subprocesses of pid=2440356
[2026-01-11 13:54:04] 2026-01-11 18:53:10,317 | INFO     | process IDs to be killed: [2440356] (in reverse order)
[2026-01-11 13:54:04] 2026-01-11 18:53:10,948 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 13:54:04] 2026-01-11 18:53:10,948 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 13:54:04] 2026-01-11 18:53:10,985 | INFO     | did not find any defunct processes belonging to 2440356
[2026-01-11 13:54:04] 2026-01-11 18:53:11,013 | INFO     | did not find any defunct processes belonging to 2440356
[2026-01-11 13:54:04] 2026-01-11 18:53:11,013 | INFO     | ready for new job
[2026-01-11 13:54:04] 2026-01-11 18:53:11,013 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 13:54:04] 2026-01-11 18:53:11,030 | INFO     | ***************************************
[2026-01-11 13:54:04] 2026-01-11 18:53:11,030 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 13:54:04] 2026-01-11 18:53:11,030 | INFO     | ***************************************
[2026-01-11 13:54:04] 2026-01-11 18:53:11,030 | INFO     | 
[2026-01-11 13:54:04] 2026-01-11 18:53:11,032 | INFO     | architecture information:
[2026-01-11 13:54:04] 2026-01-11 18:53:11,046 | INFO     | executing command: cat /etc/os-release
[2026-01-11 13:54:04] 2026-01-11 18:53:11,177 | INFO     | cat /etc/os-release:
[2026-01-11 13:54:04] NAME="CentOS Linux"
[2026-01-11 13:54:04] VERSION="7 (Core)"
[2026-01-11 13:54:04] ID="centos"
[2026-01-11 13:54:04] ID_LIKE="rhel fedora"
[2026-01-11 13:54:04] VERSION_ID="7"
[2026-01-11 13:54:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 13:54:04] ANSI_COLOR="0;31"
[2026-01-11 13:54:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 13:54:04] HOME_URL="https://www.centos.org/"
[2026-01-11 13:54:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 13:54:04] 
[2026-01-11 13:54:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 13:54:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 13:54:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 13:54:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 13:54:04] 
[2026-01-11 13:54:04] 2026-01-11 18:53:11,177 | INFO     | ***************************************
[2026-01-11 13:54:04] 2026-01-11 18:53:11,681 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-11 13:54:04] 2026-01-11 18:53:11,774 | INFO     | sufficient remaining disk space (75056021504 B)
[2026-01-11 13:54:04] 2026-01-11 18:53:11,775 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 13:54:04] 2026-01-11 18:53:11,775 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 13:54:04] 2026-01-11 18:53:11,775 | INFO     | update_server=False
[2026-01-11 13:54:04] 2026-01-11 18:53:11,775 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 13:54:04] 2026-01-11 18:53:12,155 | INFO     | all data control threads have been joined
[2026-01-11 13:54:04] 2026-01-11 18:53:12,311 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 13:54:04] 2026-01-11 18:53:12,704 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 13:54:04] 2026-01-11 18:53:12,705 | INFO     | aborting loop
[2026-01-11 13:54:04] 2026-01-11 18:53:12,782 | INFO     | [job] retrieve thread has finished
[2026-01-11 13:54:04] 2026-01-11 18:53:12,850 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 13:54:04] 2026-01-11 18:53:12,922 | INFO     | [job] validate thread has finished
[2026-01-11 13:54:04] 2026-01-11 18:53:12,931 | INFO     | all payload control threads have been joined
[2026-01-11 13:54:04] 2026-01-11 18:53:12,976 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 13:54:04] 2026-01-11 18:53:13,161 | INFO     | [data] control thread has finished
[2026-01-11 13:54:04] 2026-01-11 18:53:13,203 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 13:54:04] 2026-01-11 18:53:13,215 | INFO     | [payload] failed_post thread has finished
[2026-01-11 13:54:04] 2026-01-11 18:53:13,242 | INFO     | all job control threads have been joined
[2026-01-11 13:54:04] 2026-01-11 18:53:13,290 | INFO     | [payload] validate_post thread has finished
[2026-01-11 13:54:04] 2026-01-11 18:53:13,525 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 13:54:04] 2026-01-11 18:53:13,526 | INFO     | [data] copytool_in thread has finished
[2026-01-11 13:54:04] 2026-01-11 18:53:13,710 | INFO     | [job] job monitor thread has finished
[2026-01-11 13:54:04] 2026-01-11 18:53:13,937 | INFO     | [payload] control thread has finished
[2026-01-11 13:54:04] 2026-01-11 18:53:13,991 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 13:54:04] 2026-01-11 18:53:14,033 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 13:54:04] 2026-01-11 18:53:14,209 | INFO     | [job] queue monitor thread has finished
[2026-01-11 13:54:04] 2026-01-11 18:53:14,248 | INFO     | [job] control thread has finished
[2026-01-11 13:54:04] 2026-01-11 18:53:14,330 | INFO     | [data] copytool_out thread has finished
[2026-01-11 13:54:04] 2026-01-11 18:53:16,985 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 13:54:04] 2026-01-11 18:53:40,133 | INFO     | PID=2429354 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 13:54:04] 2026-01-11 18:53:40,134 | INFO     | .. there are 34 such processes running
[2026-01-11 13:54:04] 2026-01-11 18:53:40,134 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 13:54:04] 2026-01-11 18:53:40,134 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 13:54:04] 2026-01-11 18:53:40,134 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 13:54:04] 2026-01-11 18:53:57,627 | INFO     | [monitor] cgroup control has ended
[2026-01-11 13:54:04] 2026-01-11 18:53:58,055 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140017728608064)>', '<ExcThread(monitor, started 140017208915712)>']
[2026-01-11 13:54:04] 2026-01-11 18:53:58,259 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 13:54:04] 2026-01-11 18:53:58,260 | INFO     | [monitor] control thread has ended
[2026-01-11 13:54:04] 2026-01-11 18:54:03,081 | INFO     | all workflow threads have been joined
[2026-01-11 13:54:04] 2026-01-11 18:54:03,082 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 13:54:04] 2026-01-11 18:54:03,082 | INFO     | traces error code: 0
[2026-01-11 13:54:04] 2026-01-11 18:54:03,082 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 13:54:04] 2026-01-11 18:54:03,650 [wrapper] ==== pilot stdout END ====
[2026-01-11 13:54:04] 2026-01-11 18:54:03,711 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 13:54:04] 2026-01-11 18:54:03,741 [wrapper] pilotpid: 2429354
[2026-01-11 13:54:04] 2026-01-11 18:54:03,766 [wrapper] Pilot exit status: 0
[2026-01-11 13:54:04] 2026-01-11 18:54:03,835 [wrapper] pandaids: 6965941695
[2026-01-11 13:54:04] 2026-01-11 18:54:04,200 [wrapper] cleanup supervisor_pilot 1035438 2429355
[2026-01-11 13:54:04] 2026-01-11 18:54:04,240 [wrapper] Test setup, not cleaning
[2026-01-11 13:54:04] 2026-01-11 18:54:04,258 [wrapper] apfmon messages muted
[2026-01-11 13:54:04] 2026-01-11 18:54:04,269 [wrapper] ==== wrapper stdout END ====
[2026-01-11 13:54:04] 2026-01-11 18:54:04,287 [wrapper] ==== wrapper stderr END ====
[2026-01-11 13:54:04]  *** Error codes and diagnostics ***
[2026-01-11 13:54:04]     "exeErrorCode": 0,
[2026-01-11 13:54:04]     "exeErrorDiag": "",
[2026-01-11 13:54:04]     "pilotErrorCode": 0,
[2026-01-11 13:54:04]     "pilotErrorDiag": "",
[2026-01-11 13:54:04]  *** Listing of results directory ***
[2026-01-11 13:54:04] total 1167260
[2026-01-11 13:54:04] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-11 13:54:04] -rwx------. 1 boincer umatlas     36322 Jan 10 22:33 runpilot2-wrapper.sh
[2026-01-11 13:54:04] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 22:33 queuedata.json
[2026-01-11 13:54:04] -rw-r--r--. 1 boincer umatlas       100 Jan 11 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 13:54:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 00:01 run_atlas
[2026-01-11 13:54:04] -rw-r--r--. 1 boincer umatlas       105 Jan 11 00:01 job.xml
[2026-01-11 13:54:04] -rw-r--r--. 2 boincer umatlas 918364769 Jan 11 00:01 EVNT.48039248._000064.pool.root.1
[2026-01-11 13:54:04] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 00:01 start_atlas.sh
[2026-01-11 13:54:04] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 00:01 shared
[2026-01-11 13:54:04] -rw-r--r--. 2 boincer umatlas    592421 Jan 11 00:01 input.tar.gz
[2026-01-11 13:54:04] -rw-r--r--. 1 boincer umatlas         0 Jan 11 00:01 boinc_lockfile
[2026-01-11 13:54:04] -rw-r--r--. 1 boincer umatlas      2593 Jan 11 00:01 pandaJob.out
[2026-01-11 13:54:04] -rw-------. 1 boincer umatlas        57 Jan 11 00:01 setup.sh.local
[2026-01-11 13:54:04] -rw-------. 1 boincer umatlas    989548 Jan 11 00:03 agis_schedconf.cvmfs.json
[2026-01-11 13:54:04] drwx------. 5 boincer umatlas      4096 Jan 11 00:03 pilot3
[2026-01-11 13:54:04] -rw-r--r--. 1 boincer umatlas      6657 Jan 11 13:48 init_data.xml
[2026-01-11 13:54:04] -rw-------. 1 boincer umatlas 259349368 Jan 11 13:51 HITS.48039250._007163.pool.root.1
[2026-01-11 13:54:04] -rw-r--r--. 1 boincer umatlas       532 Jan 11 13:51 boinc_task_state.xml
[2026-01-11 13:54:04] -rw-------. 1 boincer umatlas      1052 Jan 11 13:52 memory_monitor_summary.json
[2026-01-11 13:54:04] -rw-------. 1 boincer umatlas   1516240 Jan 11 13:52 agis_ddmendpoints.agis.ALL.json
[2026-01-11 13:54:04] -rw-------. 1 boincer umatlas    994803 Jan 11 13:52 log.48039250._007163.job.log.tgz.1
[2026-01-11 13:54:04] -rw-------. 1 boincer umatlas        95 Jan 11 13:52 pilot_heartbeat.json
[2026-01-11 13:54:04] -rw-------. 1 boincer umatlas      7838 Jan 11 13:53 heartbeat.json
[2026-01-11 13:54:04] -rw-r--r--. 1 boincer umatlas        28 Jan 11 13:54 wrapper_checkpoint.txt
[2026-01-11 13:54:04] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 13:54 boinc_mmap_file
[2026-01-11 13:54:04] -rw-------. 1 boincer umatlas      4824 Jan 11 13:54 pilotlog.txt
[2026-01-11 13:54:04] -rw-------. 1 boincer umatlas   5826364 Jan 11 13:54 log.48039250._007163.job.log.1
[2026-01-11 13:54:04] -rw-------. 1 boincer umatlas       357 Jan 11 13:54 output.list
[2026-01-11 13:54:04] -rw-r--r--. 1 boincer umatlas       620 Jan 11 13:54 runtime_log
[2026-01-11 13:54:04] -rw-------. 1 boincer umatlas   6840320 Jan 11 13:54 result.tar.gz
[2026-01-11 13:54:04] -rw-------. 1 boincer umatlas       660 Jan 11 13:54 xIPMDmMO1y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmzmKDmpZMGfn.diag
[2026-01-11 13:54:04] -rw-r--r--. 1 boincer umatlas      9330 Jan 11 13:54 runtime_log.err
[2026-01-11 13:54:04] -rw-r--r--. 1 boincer umatlas     21050 Jan 11 13:54 stderr.txt
[2026-01-11 13:54:04] HITS file was successfully produced:
[2026-01-11 13:54:04] -rw-------. 1 boincer umatlas 259349368 Jan 11 13:51 shared/HITS.pool.root.1
[2026-01-11 13:54:04]  *** Contents of shared directory: ***
[2026-01-11 13:54:04] total 1157400
[2026-01-11 13:54:04] -rw-r--r--. 2 boincer umatlas 918364769 Jan 11 00:01 ATLAS.root_0
[2026-01-11 13:54:04] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 00:01 start_atlas.sh
[2026-01-11 13:54:04] -rw-r--r--. 2 boincer umatlas    592421 Jan 11 00:01 input.tar.gz
[2026-01-11 13:54:04] -rw-------. 1 boincer umatlas 259349368 Jan 11 13:51 HITS.pool.root.1
[2026-01-11 13:54:04] -rw-------. 1 boincer umatlas   6840320 Jan 11 13:54 result.tar.gz
13:54:06 (2421899): run_atlas exited; CPU time 74748.253596
13:54:06 (2421899): called boinc_finish(0)

</stderr_txt>
]]>

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