Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:37:49 (3110494): wrapper (7.7.26015): starting
22:37:49 (3110494): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 22:37:49] Arguments: --nthreads 9
[2026-01-10 22:37:49] Threads: 9
[2026-01-10 22:37:49] Checking for CVMFS
[2026-01-10 22:37:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 22:37:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 22:37:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 22:37:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 22:37:49] 2.13.3.0 12548 95757 393900 155002 2 54 22361295 40960001 10739 16776704 34 391219597 99.607 405661875 36372 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 22:37:49] CVMFS is ok
[2026-01-10 22:37:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 22:37:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 22:37:49] Further information can be found at the LHC@home message board.
[2026-01-10 22:37:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 22:37:49] Checking for apptainer binary...
[2026-01-10 22:37:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 22:37:49] Running /usr/bin/apptainer --version
[2026-01-10 22:37:49] apptainer version 1.4.5-2.el9
[2026-01-10 22:37:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 22:37:50] c7-11-12.aglt2.org
[2026-01-10 22:37:50] apptainer works
[2026-01-10 22:37:50] Set ATHENA_PROC_NUMBER=9
[2026-01-10 22:37:50] Set ATHENA_CORE_NUMBER=9
[2026-01-10 22:37:50] Starting ATLAS job with PandaID=6965941691
[2026-01-10 22:37:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 01:57:31]  *** The last 200 lines of the pilot log: ***
[2026-01-11 01:57:31] 2026-01-11 06:56:40,839 | INFO     | maximum number of monitored processes: 6
[2026-01-11 01:57:31] 2026-01-11 06:56:41,305 | INFO     | time since job start (11918s) is within the limit (349056.0s)
[2026-01-11 01:57:31] 2026-01-11 06:56:43,311 | INFO     | time since job start (11920s) is within the limit (349056.0s)
[2026-01-11 01:57:31] 2026-01-11 06:56:43,345 | INFO     | monitor loop #798: job 0:6965941691 is in state 'finished'
[2026-01-11 01:57:31] 2026-01-11 06:56:43,345 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 01:57:31] 2026-01-11 06:56:45,317 | INFO     | time since job start (11922s) is within the limit (349056.0s)
[2026-01-11 01:57:31] 2026-01-11 06:56:45,317 | INFO     | 11924s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-11 01:57:31] 2026-01-11 06:56:45,850 | INFO     | monitor loop #799: job 0:6965941691 is in state 'finished'
[2026-01-11 01:57:31] 2026-01-11 06:56:45,850 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 01:57:31] 2026-01-11 06:56:46,483 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 01:57:31] 2026-01-11 06:56:46,488 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3277.9790312500004
[2026-01-11 01:57:31] 2026-01-11 06:56:46,498 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965941691/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 01:57:31] 2026-01-11 06:56:46,499 | INFO     | extracted standard info from prmon json
[2026-01-11 01:57:31] 2026-01-11 06:56:46,499 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 01:57:31] 2026-01-11 06:56:46,499 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 01:57:31] 2026-01-11 06:56:46,499 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 01:57:31] 2026-01-11 06:56:46,499 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 01:57:31] 2026-01-11 06:56:46,502 | INFO     | fitting pss+swap vs Time
[2026-01-11 01:57:31] 2026-01-11 06:56:46,503 | INFO     | sum of square deviations: 2299295739.917954
[2026-01-11 01:57:31] 2026-01-11 06:56:46,504 | INFO     | sum of deviations: 12498088642.061554
[2026-01-11 01:57:31] 2026-01-11 06:56:46,504 | INFO     | mean x: 1768108631.2871795
[2026-01-11 01:57:31] 2026-01-11 06:56:46,504 | INFO     | mean y: 2628318.7846153844
[2026-01-11 01:57:31] 2026-01-11 06:56:46,504 | INFO     | intersect: -9608131192.912573
[2026-01-11 01:57:31] 2026-01-11 06:56:46,504 | INFO     | chi2: 1.2326719158786061
[2026-01-11 01:57:31] 2026-01-11 06:56:46,505 | INFO     | sum of square deviations: 2126946796.9947312
[2026-01-11 01:57:31] 2026-01-11 06:56:46,506 | INFO     | sum of deviations: 11790723766.973677
[2026-01-11 01:57:31] 2026-01-11 06:56:46,506 | INFO     | mean x: 1768108478.7947369
[2026-01-11 01:57:31] 2026-01-11 06:56:46,506 | INFO     | mean y: 2627698.9736842103
[2026-01-11 01:57:31] 2026-01-11 06:56:46,506 | INFO     | intersect: -9798876829.94492
[2026-01-11 01:57:31] 2026-01-11 06:56:46,506 | INFO     | chi2: 1.2326308591422657
[2026-01-11 01:57:31] 2026-01-11 06:56:46,506 | INFO     | current chi2=1.2326308591422657 (change=0.0033307107764525097 %)
[2026-01-11 01:57:31] 2026-01-11 06:56:46,506 | INFO     | right removable region: 189
[2026-01-11 01:57:31] 2026-01-11 06:56:46,507 | INFO     | sum of square deviations: 2126912636.9947312
[2026-01-11 01:57:31] 2026-01-11 06:56:46,508 | INFO     | sum of deviations: -13544147254.047365
[2026-01-11 01:57:31] 2026-01-11 06:56:46,508 | INFO     | mean x: 1768108783.7947369
[2026-01-11 01:57:31] 2026-01-11 06:56:46,508 | INFO     | mean y: 2651083.152631579
[2026-01-11 01:57:31] 2026-01-11 06:56:46,508 | INFO     | intersect: 11261940868.899405
[2026-01-11 01:57:31] 2026-01-11 06:56:46,508 | INFO     | chi2: 0.06108757143497166
[2026-01-11 01:57:31] 2026-01-11 06:56:46,508 | INFO     | current chi2=0.06108757143497166 (change=95.04429600057607 %)
[2026-01-11 01:57:31] 2026-01-11 06:56:46,509 | INFO     | sum of square deviations: 1963366909.0486436
[2026-01-11 01:57:31] 2026-01-11 06:56:46,510 | INFO     | sum of deviations: -12032560948.41082
[2026-01-11 01:57:31] 2026-01-11 06:56:46,510 | INFO     | mean x: 1768108936.3027027
[2026-01-11 01:57:31] 2026-01-11 06:56:46,510 | INFO     | mean y: 2649667.2216216214
[2026-01-11 01:57:31] 2026-01-11 06:56:46,510 | INFO     | intersect: 10838565481.755194
[2026-01-11 01:57:31] 2026-01-11 06:56:46,510 | INFO     | chi2: 0.06075096028213232
[2026-01-11 01:57:31] 2026-01-11 06:56:46,510 | INFO     | current chi2=0.06075096028213232 (change=0.5510305041307328 %)
[2026-01-11 01:57:31] 2026-01-11 06:56:46,510 | INFO     | left removable region: 20
[2026-01-11 01:57:31] 2026-01-11 06:56:46,510 | INFO     | sum of square deviations: 1496739843.4437804
[2026-01-11 01:57:31] 2026-01-11 06:56:46,511 | INFO     | sum of deviations: -6481357628.041422
[2026-01-11 01:57:31] 2026-01-11 06:56:46,511 | INFO     | mean x: 1768109058.331361
[2026-01-11 01:57:31] 2026-01-11 06:56:46,511 | INFO     | mean y: 2643588.8757396447
[2026-01-11 01:57:31] 2026-01-11 06:56:46,512 | INFO     | intersect: 7659115876.042154
[2026-01-11 01:57:31] 2026-01-11 06:56:46,512 | INFO     | chi2: 0.05107499375127652
[2026-01-11 01:57:31] 2026-01-11 06:56:46,512 | INFO     | current memory leak: -4.33 B/s (using 169 data points, chi2=0.05)
[2026-01-11 01:57:31] 2026-01-11 06:56:46,512 | INFO     | could have reported an average CPU frequency of 3282 MHz (10 samples)
[2026-01-11 01:57:31] 2026-01-11 06:56:46,512 | INFO     | ..............................
[2026-01-11 01:57:31] 2026-01-11 06:56:46,512 | INFO     | . Timing measurements:
[2026-01-11 01:57:31] 2026-01-11 06:56:46,512 | INFO     | . get job = 0 s
[2026-01-11 01:57:31] 2026-01-11 06:56:46,513 | INFO     | . initial setup = 2 s
[2026-01-11 01:57:31] 2026-01-11 06:56:46,513 | INFO     | . payload setup = 7 s
[2026-01-11 01:57:31] 2026-01-11 06:56:46,513 | INFO     | . stage-in = 0 s
[2026-01-11 01:57:31] 2026-01-11 06:56:46,513 | INFO     | . payload execution = 11883 s
[2026-01-11 01:57:31] 2026-01-11 06:56:46,513 | INFO     | . stage-out = 2 s
[2026-01-11 01:57:31] 2026-01-11 06:56:46,513 | INFO     | . log creation = 0 s
[2026-01-11 01:57:31] 2026-01-11 06:56:46,513 | INFO     | ..............................
[2026-01-11 01:57:31] 2026-01-11 06:56:46,606 | INFO     | 
[2026-01-11 01:57:31] 2026-01-11 06:56:46,607 | INFO     | job summary report
[2026-01-11 01:57:31] 2026-01-11 06:56:46,607 | INFO     | --------------------------------------------------
[2026-01-11 01:57:31] 2026-01-11 06:56:46,607 | INFO     | PanDA job id: 6965941691
[2026-01-11 01:57:31] 2026-01-11 06:56:46,607 | INFO     | task id: 48039250
[2026-01-11 01:57:31] 2026-01-11 06:56:46,607 | INFO     | errors: (none)
[2026-01-11 01:57:31] 2026-01-11 06:56:46,607 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 01:57:31] 2026-01-11 06:56:46,607 | INFO     | pilot state: finished 
[2026-01-11 01:57:31] 2026-01-11 06:56:46,607 | INFO     | transexitcode: 0
[2026-01-11 01:57:31] 2026-01-11 06:56:46,607 | INFO     | exeerrorcode: 0
[2026-01-11 01:57:31] 2026-01-11 06:56:46,607 | INFO     | exeerrordiag: 
[2026-01-11 01:57:31] 2026-01-11 06:56:46,608 | INFO     | exitcode: 0
[2026-01-11 01:57:31] 2026-01-11 06:56:46,608 | INFO     | exitmsg: OK
[2026-01-11 01:57:31] 2026-01-11 06:56:46,608 | INFO     | cpuconsumptiontime: 44611 s
[2026-01-11 01:57:31] 2026-01-11 06:56:46,608 | INFO     | nevents: 400
[2026-01-11 01:57:31] 2026-01-11 06:56:46,608 | INFO     | neventsw: 0
[2026-01-11 01:57:31] 2026-01-11 06:56:46,608 | INFO     | pid: 3123243
[2026-01-11 01:57:31] 2026-01-11 06:56:46,608 | INFO     | pgrp: 3123243
[2026-01-11 01:57:31] 2026-01-11 06:56:46,608 | INFO     | corecount: 9
[2026-01-11 01:57:31] 2026-01-11 06:56:46,608 | INFO     | event service: False
[2026-01-11 01:57:31] 2026-01-11 06:56:46,608 | INFO     | sizes: {0: 2283801, 1: 2284056, 6: 2284318, 12: 2284346, 11894: 2314345, 11895: 2314344, 11898: 2323582, 11908: 2323720}
[2026-01-11 01:57:31] 2026-01-11 06:56:46,608 | INFO     | --------------------------------------------------
[2026-01-11 01:57:31] 2026-01-11 06:56:46,608 | INFO     | 
[2026-01-11 01:57:31] 2026-01-11 06:56:46,608 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 01:57:31] 2026-01-11 06:56:46,666 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 01:57:31] 2026-01-11 06:56:46,667 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 01:57:31] 2026-01-11 06:56:46,667 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 01:57:31] 2026-01-11 06:56:46,667 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 01:57:31] 2026-01-11 06:56:46,667 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 01:57:31] 2026-01-11 06:56:46,667 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 01:57:31] 2026-01-11 06:56:46,667 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 01:57:31] 2026-01-11 06:56:46,667 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 01:57:31] 2026-01-11 06:56:46,667 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 01:57:31] 2026-01-11 06:56:46,667 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 01:57:31] 2026-01-11 06:56:46,667 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 01:57:31] 2026-01-11 06:56:46,667 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 01:57:31] 2026-01-11 06:56:46,667 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 01:57:31] 2026-01-11 06:56:46,667 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 01:57:31] 2026-01-11 06:56:46,668 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 01:57:31] 2026-01-11 06:56:46,668 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 01:57:31] 2026-01-11 06:56:46,668 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 01:57:31] 2026-01-11 06:56:46,668 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 01:57:31] 2026-01-11 06:56:46,668 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 01:57:31] 2026-01-11 06:56:46,668 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 01:57:31] 2026-01-11 06:56:46,668 | INFO     | job 6965941691 has completed (purged errors)
[2026-01-11 01:57:31] 2026-01-11 06:56:46,668 | INFO     | overall cleanup function is called
[2026-01-11 01:57:31] 2026-01-11 06:56:47,686 | INFO     | --- collectZombieJob: --- 10, [3123243]
[2026-01-11 01:57:31] 2026-01-11 06:56:47,686 | INFO     | zombie collector waiting for pid 3123243
[2026-01-11 01:57:31] 2026-01-11 06:56:47,686 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 01:57:31] 2026-01-11 06:56:47,686 | INFO     | collected zombie processes
[2026-01-11 01:57:31] 2026-01-11 06:56:47,686 | INFO     | will attempt to kill all subprocesses of pid=3123243
[2026-01-11 01:57:31] 2026-01-11 06:56:47,979 | INFO     | process IDs to be killed: [3123243] (in reverse order)
[2026-01-11 01:57:31] 2026-01-11 06:56:48,076 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 01:57:31] 2026-01-11 06:56:48,077 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 01:57:31] 2026-01-11 06:56:48,088 | INFO     | did not find any defunct processes belonging to 3123243
[2026-01-11 01:57:31] 2026-01-11 06:56:48,099 | INFO     | did not find any defunct processes belonging to 3123243
[2026-01-11 01:57:31] 2026-01-11 06:56:48,099 | INFO     | ready for new job
[2026-01-11 01:57:31] 2026-01-11 06:56:48,099 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 01:57:31] 2026-01-11 06:56:48,102 | INFO     | ***************************************
[2026-01-11 01:57:31] 2026-01-11 06:56:48,103 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 01:57:31] 2026-01-11 06:56:48,103 | INFO     | ***************************************
[2026-01-11 01:57:31] 2026-01-11 06:56:48,103 | INFO     | 
[2026-01-11 01:57:31] 2026-01-11 06:56:48,127 | INFO     | architecture information:
[2026-01-11 01:57:31] 2026-01-11 06:56:48,142 | INFO     | executing command: cat /etc/os-release
[2026-01-11 01:57:31] 2026-01-11 06:56:48,197 | INFO     | cat /etc/os-release:
[2026-01-11 01:57:31] NAME="CentOS Linux"
[2026-01-11 01:57:31] VERSION="7 (Core)"
[2026-01-11 01:57:31] ID="centos"
[2026-01-11 01:57:31] ID_LIKE="rhel fedora"
[2026-01-11 01:57:31] VERSION_ID="7"
[2026-01-11 01:57:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 01:57:31] ANSI_COLOR="0;31"
[2026-01-11 01:57:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 01:57:31] HOME_URL="https://www.centos.org/"
[2026-01-11 01:57:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 01:57:31] 
[2026-01-11 01:57:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 01:57:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 01:57:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 01:57:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 01:57:31] 
[2026-01-11 01:57:31] 2026-01-11 06:56:48,197 | INFO     | ***************************************
[2026-01-11 01:57:31] 2026-01-11 06:56:48,701 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 01:57:31] 2026-01-11 06:56:48,723 | INFO     | sufficient remaining disk space (82945507328 B)
[2026-01-11 01:57:31] 2026-01-11 06:56:48,723 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 01:57:31] 2026-01-11 06:56:48,723 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 01:57:31] 2026-01-11 06:56:48,723 | INFO     | update_server=False
[2026-01-11 01:57:31] 2026-01-11 06:56:48,724 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 01:57:31] 2026-01-11 06:56:49,218 | INFO     | all data control threads have been joined
[2026-01-11 01:57:31] 2026-01-11 06:56:49,370 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 01:57:31] 2026-01-11 06:56:49,370 | INFO     | aborting loop
[2026-01-11 01:57:31] 2026-01-11 06:56:49,488 | INFO     | all job control threads have been joined
[2026-01-11 01:57:31] 2026-01-11 06:56:49,585 | INFO     | all payload control threads have been joined
[2026-01-11 01:57:31] 2026-01-11 06:56:49,729 | INFO     | [job] retrieve thread has finished
[2026-01-11 01:57:31] 2026-01-11 06:56:49,931 | INFO     | [data] copytool_in thread has finished
[2026-01-11 01:57:31] 2026-01-11 06:56:49,976 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 01:57:31] 2026-01-11 06:56:50,036 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 01:57:31] 2026-01-11 06:56:50,224 | INFO     | [data] control thread has finished
[2026-01-11 01:57:31] 2026-01-11 06:56:50,376 | INFO     | [job] job monitor thread has finished
[2026-01-11 01:57:31] 2026-01-11 06:56:50,488 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 01:57:31] 2026-01-11 06:56:50,495 | INFO     | [job] control thread has finished
[2026-01-11 01:57:31] 2026-01-11 06:56:50,590 | INFO     | [job] validate thread has finished
[2026-01-11 01:57:31] 2026-01-11 06:56:50,592 | INFO     | [payload] control thread has finished
[2026-01-11 01:57:31] 2026-01-11 06:56:50,659 | INFO     | [payload] validate_post thread has finished
[2026-01-11 01:57:31] 2026-01-11 06:56:51,009 | INFO     | [payload] failed_post thread has finished
[2026-01-11 01:57:31] 2026-01-11 06:56:51,056 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 01:57:31] 2026-01-11 06:56:51,059 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 01:57:31] 2026-01-11 06:56:51,626 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 01:57:31] 2026-01-11 06:56:52,043 | INFO     | [data] copytool_out thread has finished
[2026-01-11 01:57:31] 2026-01-11 06:56:52,102 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 01:57:31] 2026-01-11 06:56:52,631 | INFO     | [job] queue monitor thread has finished
[2026-01-11 01:57:31] 2026-01-11 06:56:56,120 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 01:57:31] 2026-01-11 06:57:19,196 | INFO     | PID=3114244 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 01:57:31] 2026-01-11 06:57:19,197 | INFO     | .. there are 10 such processes running
[2026-01-11 01:57:31] 2026-01-11 06:57:19,197 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 01:57:31] 2026-01-11 06:57:19,197 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 01:57:31] 2026-01-11 06:57:19,197 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 01:57:31] 2026-01-11 06:57:23,295 | INFO     | [monitor] cgroup control has ended
[2026-01-11 01:57:31] 2026-01-11 06:57:24,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140177739925312)>', '<ExcThread(monitor, started 140177112553216)>']
[2026-01-11 01:57:31] 2026-01-11 06:57:25,230 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 01:57:31] 2026-01-11 06:57:25,230 | INFO     | [monitor] control thread has ended
[2026-01-11 01:57:31] 2026-01-11 06:57:29,865 | INFO     | all workflow threads have been joined
[2026-01-11 01:57:31] 2026-01-11 06:57:29,871 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 01:57:31] 2026-01-11 06:57:29,872 | INFO     | traces error code: 0
[2026-01-11 01:57:31] 2026-01-11 06:57:29,872 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 01:57:31] 2026-01-11 06:57:30,835 [wrapper] ==== pilot stdout END ====
[2026-01-11 01:57:31] 2026-01-11 06:57:30,842 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 01:57:31] 2026-01-11 06:57:30,850 [wrapper] pilotpid: 3114244
[2026-01-11 01:57:31] 2026-01-11 06:57:30,882 [wrapper] Pilot exit status: 0
[2026-01-11 01:57:31] 2026-01-11 06:57:30,927 [wrapper] pandaids: 6965941691
[2026-01-11 01:57:31] 2026-01-11 06:57:31,013 [wrapper] cleanup supervisor_pilot 3557540 3114245
[2026-01-11 01:57:31] 2026-01-11 06:57:31,017 [wrapper] Test setup, not cleaning
[2026-01-11 01:57:31] 2026-01-11 06:57:31,020 [wrapper] apfmon messages muted
[2026-01-11 01:57:31] 2026-01-11 06:57:31,022 [wrapper] ==== wrapper stdout END ====
[2026-01-11 01:57:31] 2026-01-11 06:57:31,024 [wrapper] ==== wrapper stderr END ====
[2026-01-11 01:57:31]  *** Error codes and diagnostics ***
[2026-01-11 01:57:31]     "exeErrorCode": 0,
[2026-01-11 01:57:31]     "exeErrorDiag": "",
[2026-01-11 01:57:31]     "pilotErrorCode": 0,
[2026-01-11 01:57:31]     "pilotErrorDiag": "",
[2026-01-11 01:57:31]  *** Listing of results directory ***
[2026-01-11 01:57:31] total 1153044
[2026-01-11 01:57:31] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-11 01:57:31] -rwx------. 1 boincer umatlas     36322 Jan 10 22:33 runpilot2-wrapper.sh
[2026-01-11 01:57:31] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 22:33 queuedata.json
[2026-01-11 01:57:31] -rw-r--r--. 1 boincer umatlas       100 Jan 10 22:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 01:57:31] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 22:37 run_atlas
[2026-01-11 01:57:31] -rw-r--r--. 1 boincer umatlas       105 Jan 10 22:37 job.xml
[2026-01-11 01:57:31] -rw-r--r--. 2 boincer umatlas 918364769 Jan 10 22:37 EVNT.48039248._000064.pool.root.1
[2026-01-11 01:57:31] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:37 start_atlas.sh
[2026-01-11 01:57:31] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 22:37 shared
[2026-01-11 01:57:31] -rw-r--r--. 2 boincer umatlas    592419 Jan 10 22:37 input.tar.gz
[2026-01-11 01:57:31] -rw-r--r--. 1 boincer umatlas         0 Jan 10 22:37 boinc_lockfile
[2026-01-11 01:57:31] -rw-r--r--. 1 boincer umatlas      2593 Jan 10 22:37 pandaJob.out
[2026-01-11 01:57:31] -rw-------. 1 boincer umatlas        57 Jan 10 22:37 setup.sh.local
[2026-01-11 01:57:31] -rw-------. 1 boincer umatlas    989548 Jan 10 22:38 agis_schedconf.cvmfs.json
[2026-01-11 01:57:31] drwx------. 5 boincer umatlas      4096 Jan 10 22:38 pilot3
[2026-01-11 01:57:31] -rw-------. 1 boincer umatlas 254250575 Jan 11 01:55 HITS.48039250._007159.pool.root.1
[2026-01-11 01:57:31] -rw-r--r--. 1 boincer umatlas       531 Jan 11 01:55 boinc_task_state.xml
[2026-01-11 01:57:31] -rw-r--r--. 1 boincer umatlas      6902 Jan 11 01:56 init_data.xml
[2026-01-11 01:57:31] -rw-------. 1 boincer umatlas      1030 Jan 11 01:56 memory_monitor_summary.json
[2026-01-11 01:57:31] -rw-------. 1 boincer umatlas   1516240 Jan 11 01:56 agis_ddmendpoints.agis.ALL.json
[2026-01-11 01:57:31] -rw-------. 1 boincer umatlas    478660 Jan 11 01:56 log.48039250._007159.job.log.tgz.1
[2026-01-11 01:57:31] -rw-------. 1 boincer umatlas        95 Jan 11 01:56 pilot_heartbeat.json
[2026-01-11 01:57:31] -rw-------. 1 boincer umatlas      7770 Jan 11 01:56 heartbeat.json
[2026-01-11 01:57:31] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 01:57 boinc_mmap_file
[2026-01-11 01:57:31] -rw-r--r--. 1 boincer umatlas        28 Jan 11 01:57 wrapper_checkpoint.txt
[2026-01-11 01:57:31] -rw-------. 1 boincer umatlas      4824 Jan 11 01:57 pilotlog.txt
[2026-01-11 01:57:31] -rw-------. 1 boincer umatlas   1615999 Jan 11 01:57 log.48039250._007159.job.log.1
[2026-01-11 01:57:31] -rw-------. 1 boincer umatlas       357 Jan 11 01:57 output.list
[2026-01-11 01:57:31] -rw-r--r--. 1 boincer umatlas       620 Jan 11 01:57 runtime_log
[2026-01-11 01:57:31] -rw-------. 1 boincer umatlas   2109440 Jan 11 01:57 result.tar.gz
[2026-01-11 01:57:31] -rw-r--r--. 1 boincer umatlas      9343 Jan 11 01:57 runtime_log.err
[2026-01-11 01:57:31] -rw-------. 1 boincer umatlas       656 Jan 11 01:57 G4HMDmMO1y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkzmKDmMw2hQm.diag
[2026-01-11 01:57:31] -rw-r--r--. 1 boincer umatlas     21409 Jan 11 01:57 stderr.txt
[2026-01-11 01:57:31] HITS file was successfully produced:
[2026-01-11 01:57:31] -rw-------. 1 boincer umatlas 254250575 Jan 11 01:55 shared/HITS.pool.root.1
[2026-01-11 01:57:31]  *** Contents of shared directory: ***
[2026-01-11 01:57:31] total 1147800
[2026-01-11 01:57:31] -rw-r--r--. 2 boincer umatlas 918364769 Jan 10 22:37 ATLAS.root_0
[2026-01-11 01:57:31] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:37 start_atlas.sh
[2026-01-11 01:57:31] -rw-r--r--. 2 boincer umatlas    592419 Jan 10 22:37 input.tar.gz
[2026-01-11 01:57:31] -rw-------. 1 boincer umatlas 254250575 Jan 11 01:55 HITS.pool.root.1
[2026-01-11 01:57:31] -rw-------. 1 boincer umatlas   2109440 Jan 11 01:57 result.tar.gz
01:57:32 (3110494): run_atlas exited; CPU time 44763.199494
01:57:32 (3110494): called boinc_finish(0)

</stderr_txt>
]]>

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