Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:13:41 (82563): wrapper (7.7.26015): starting
23:13:41 (82563): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 23:13:41] Arguments: --nthreads 9
[2026-01-10 23:13:41] Threads: 9
[2026-01-10 23:13:41] Checking for CVMFS
[2026-01-10 23:13:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 23:13:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 23:13:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 23:13:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 23:13:46] 2.13.3.0 12942 41357 492256 155002 0 499 20806153 32935937 51224 16776704 0 434886959 99.772 239646387 28858 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 23:13:46] CVMFS is ok
[2026-01-10 23:13:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 23:13:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 23:13:46] Further information can be found at the LHC@home message board.
[2026-01-10 23:13:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 23:13:46] Checking for apptainer binary...
[2026-01-10 23:13:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 23:13:46] Running /usr/bin/apptainer --version
[2026-01-10 23:13:46] apptainer version 1.4.5-2.el9
[2026-01-10 23:13:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 23:13:48] lc-10-9.aglt2.org
[2026-01-10 23:13:48] apptainer works
[2026-01-10 23:13:48] Set ATHENA_PROC_NUMBER=9
[2026-01-10 23:13:48] Set ATHENA_CORE_NUMBER=9
[2026-01-10 23:13:48] Starting ATLAS job with PandaID=6965941365
[2026-01-10 23:13:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 03:39:45]  *** The last 200 lines of the pilot log: ***
[2026-01-11 03:39:45] 2026-01-11 08:38:43,925 | INFO     | monitor loop #860: job 0:6965941365 is in state 'finished'
[2026-01-11 03:39:45] 2026-01-11 08:38:43,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:39:45] 2026-01-11 08:38:44,812 | INFO     | time since job start (15814s) is within the limit (349056.0s)
[2026-01-11 03:39:45] 2026-01-11 08:38:46,433 | INFO     | monitor loop #861: job 0:6965941365 is in state 'finished'
[2026-01-11 03:39:45] 2026-01-11 08:38:46,433 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:39:45] 2026-01-11 08:38:46,827 | INFO     | time since job start (15816s) is within the limit (349056.0s)
[2026-01-11 03:39:45] 2026-01-11 08:38:48,834 | INFO     | time since job start (15818s) is within the limit (349056.0s)
[2026-01-11 03:39:45] 2026-01-11 08:38:48,949 | INFO     | monitor loop #862: job 0:6965941365 is in state 'finished'
[2026-01-11 03:39:45] 2026-01-11 08:38:48,949 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:39:45] 2026-01-11 08:38:49,959 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 03:39:45] 2026-01-11 08:38:49,974 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2780.405291666666
[2026-01-11 03:39:45] 2026-01-11 08:38:50,038 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965941365/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 03:39:45] 2026-01-11 08:38:50,039 | INFO     | extracted standard info from prmon json
[2026-01-11 03:39:45] 2026-01-11 08:38:50,039 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 03:39:45] 2026-01-11 08:38:50,039 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 03:39:45] 2026-01-11 08:38:50,049 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 03:39:45] 2026-01-11 08:38:50,053 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 03:39:45] 2026-01-11 08:38:50,059 | INFO     | fitting pss+swap vs Time
[2026-01-11 03:39:45] 2026-01-11 08:38:50,059 | INFO     | sum of square deviations: 5263388193.758763
[2026-01-11 03:39:45] 2026-01-11 08:38:50,061 | INFO     | sum of deviations: 10953543457.715961
[2026-01-11 03:39:45] 2026-01-11 08:38:50,061 | INFO     | mean x: 1768112873.0933852
[2026-01-11 03:39:45] 2026-01-11 08:38:50,061 | INFO     | mean y: 2608001.3035019455
[2026-01-11 03:39:45] 2026-01-11 08:38:50,061 | INFO     | intersect: -3676980218.417894
[2026-01-11 03:39:45] 2026-01-11 08:38:50,062 | INFO     | chi2: 4.365457933677309
[2026-01-11 03:39:45] 2026-01-11 08:38:50,062 | INFO     | sum of square deviations: 4962124748.714297
[2026-01-11 03:39:45] 2026-01-11 08:38:50,064 | INFO     | sum of deviations: 27878206287.238056
[2026-01-11 03:39:45] 2026-01-11 08:38:50,064 | INFO     | mean x: 1768112720.5952382
[2026-01-11 03:39:45] 2026-01-11 08:38:50,064 | INFO     | mean y: 2616434.5317460317
[2026-01-11 03:39:45] 2026-01-11 08:38:50,064 | INFO     | intersect: -9930993391.907104
[2026-01-11 03:39:45] 2026-01-11 08:38:50,065 | INFO     | chi2: 3.7028308351931294
[2026-01-11 03:39:45] 2026-01-11 08:38:50,065 | INFO     | current chi2=3.7028308351931294 (change=15.178868026017279 %)
[2026-01-11 03:39:45] 2026-01-11 08:38:50,065 | INFO     | right removable region: 251
[2026-01-11 03:39:45] 2026-01-11 08:38:50,065 | INFO     | sum of square deviations: 4962110108.714297
[2026-01-11 03:39:45] 2026-01-11 08:38:50,067 | INFO     | sum of deviations: -63024198652.714294
[2026-01-11 03:39:45] 2026-01-11 08:38:50,067 | INFO     | mean x: 1768113025.5952382
[2026-01-11 03:39:45] 2026-01-11 08:38:50,067 | INFO     | mean y: 2645350.238095238
[2026-01-11 03:39:45] 2026-01-11 08:38:50,067 | INFO     | intersect: 22459605015.415493
[2026-01-11 03:39:45] 2026-01-11 08:38:50,068 | INFO     | chi2: 1.370110448028234
[2026-01-11 03:39:45] 2026-01-11 08:38:50,068 | INFO     | current chi2=1.370110448028234 (change=68.61473712852614 %)
[2026-01-11 03:39:45] 2026-01-11 08:38:50,068 | INFO     | sum of square deviations: 4672553173.668035
[2026-01-11 03:39:45] 2026-01-11 08:38:50,070 | INFO     | sum of deviations: -82653217270.38461
[2026-01-11 03:39:45] 2026-01-11 08:38:50,070 | INFO     | mean x: 1768113178.097166
[2026-01-11 03:39:45] 2026-01-11 08:38:50,070 | INFO     | mean y: 2655655.3076923075
[2026-01-11 03:39:45] 2026-01-11 08:38:50,070 | INFO     | intersect: 31278970174.629192
[2026-01-11 03:39:45] 2026-01-11 08:38:50,071 | INFO     | chi2: 1.0931304007903875
[2026-01-11 03:39:45] 2026-01-11 08:38:50,071 | INFO     | current chi2=1.0931304007903875 (change=20.215891911229246 %)
[2026-01-11 03:39:45] 2026-01-11 08:38:50,071 | INFO     | left removable region: 20
[2026-01-11 03:39:45] 2026-01-11 08:38:50,071 | INFO     | sum of square deviations: 3822045789.506506
[2026-01-11 03:39:45] 2026-01-11 08:38:50,073 | INFO     | sum of deviations: -64187862779.90907
[2026-01-11 03:39:45] 2026-01-11 08:38:50,073 | INFO     | mean x: 1768113300.1038961
[2026-01-11 03:39:45] 2026-01-11 08:38:50,073 | INFO     | mean y: 2665386.4545454546
[2026-01-11 03:39:45] 2026-01-11 08:38:50,073 | INFO     | intersect: 29696557123.176735
[2026-01-11 03:39:45] 2026-01-11 08:38:50,073 | INFO     | chi2: 0.3241663203634911
[2026-01-11 03:39:45] 2026-01-11 08:38:50,074 | INFO     | current memory leak: -16.79 B/s (using 231 data points, chi2=0.32)
[2026-01-11 03:39:45] 2026-01-11 08:38:50,074 | INFO     | could have reported an average CPU frequency of 2779 MHz (12 samples)
[2026-01-11 03:39:45] 2026-01-11 08:38:50,074 | INFO     | ..............................
[2026-01-11 03:39:45] 2026-01-11 08:38:50,075 | INFO     | . Timing measurements:
[2026-01-11 03:39:45] 2026-01-11 08:38:50,075 | INFO     | . get job = 0 s
[2026-01-11 03:39:45] 2026-01-11 08:38:50,075 | INFO     | . initial setup = 8 s
[2026-01-11 03:39:45] 2026-01-11 08:38:50,075 | INFO     | . payload setup = 51 s
[2026-01-11 03:39:45] 2026-01-11 08:38:50,075 | INFO     | . stage-in = 0 s
[2026-01-11 03:39:45] 2026-01-11 08:38:50,075 | INFO     | . payload execution = 15652 s
[2026-01-11 03:39:45] 2026-01-11 08:38:50,075 | INFO     | . stage-out = 6 s
[2026-01-11 03:39:45] 2026-01-11 08:38:50,075 | INFO     | . log creation = 1 s
[2026-01-11 03:39:45] 2026-01-11 08:38:50,075 | INFO     | ..............................
[2026-01-11 03:39:45] 2026-01-11 08:38:50,665 | INFO     | 
[2026-01-11 03:39:45] 2026-01-11 08:38:50,665 | INFO     | job summary report
[2026-01-11 03:39:45] 2026-01-11 08:38:50,665 | INFO     | --------------------------------------------------
[2026-01-11 03:39:45] 2026-01-11 08:38:50,665 | INFO     | PanDA job id: 6965941365
[2026-01-11 03:39:45] 2026-01-11 08:38:50,665 | INFO     | task id: 48039250
[2026-01-11 03:39:45] 2026-01-11 08:38:50,665 | INFO     | errors: (none)
[2026-01-11 03:39:45] 2026-01-11 08:38:50,665 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 03:39:45] 2026-01-11 08:38:50,665 | INFO     | pilot state: finished 
[2026-01-11 03:39:45] 2026-01-11 08:38:50,665 | INFO     | transexitcode: 0
[2026-01-11 03:39:45] 2026-01-11 08:38:50,665 | INFO     | exeerrorcode: 0
[2026-01-11 03:39:45] 2026-01-11 08:38:50,666 | INFO     | exeerrordiag: 
[2026-01-11 03:39:45] 2026-01-11 08:38:50,666 | INFO     | exitcode: 0
[2026-01-11 03:39:45] 2026-01-11 08:38:50,666 | INFO     | exitmsg: OK
[2026-01-11 03:39:45] 2026-01-11 08:38:50,666 | INFO     | cpuconsumptiontime: 57855 s
[2026-01-11 03:39:45] 2026-01-11 08:38:50,666 | INFO     | nevents: 400
[2026-01-11 03:39:45] 2026-01-11 08:38:50,666 | INFO     | neventsw: 0
[2026-01-11 03:39:45] 2026-01-11 08:38:50,666 | INFO     | pid: 101066
[2026-01-11 03:39:45] 2026-01-11 08:38:50,666 | INFO     | pgrp: 101066
[2026-01-11 03:39:45] 2026-01-11 08:38:50,666 | INFO     | corecount: 9
[2026-01-11 03:39:45] 2026-01-11 08:38:50,666 | INFO     | event service: False
[2026-01-11 03:39:45] 2026-01-11 08:38:50,666 | INFO     | sizes: {0: 2283195, 1: 2283880, 2: 2283880, 3: 2284107, 14: 2284107, 26: 2284135, 35: 2284553, 37: 2284581, 15707: 2315708, 15708: 2315707, 15715: 2324761, 15717: 
[2026-01-11 03:39:45] 2026-01-11 08:38:50,666 | INFO     | --------------------------------------------------
[2026-01-11 03:39:45] 2026-01-11 08:38:50,666 | INFO     | 
[2026-01-11 03:39:45] 2026-01-11 08:38:50,667 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-11 03:39:45] 2026-01-11 08:38:50,839 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 03:39:45] 2026-01-11 08:38:50,840 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 03:39:45] 2026-01-11 08:38:50,840 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 03:39:45] 2026-01-11 08:38:50,840 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 03:39:45] 2026-01-11 08:38:50,840 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 03:39:45] 2026-01-11 08:38:50,840 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 03:39:45] 2026-01-11 08:38:50,840 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 03:39:45] 2026-01-11 08:38:50,840 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 03:39:45] 2026-01-11 08:38:50,840 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 03:39:45] 2026-01-11 08:38:50,840 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 03:39:45] 2026-01-11 08:38:50,840 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 03:39:45] 2026-01-11 08:38:50,841 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 03:39:45] 2026-01-11 08:38:50,841 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 03:39:45] 2026-01-11 08:38:50,841 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 03:39:45] 2026-01-11 08:38:50,841 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 03:39:45] 2026-01-11 08:38:50,841 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 03:39:45] 2026-01-11 08:38:50,841 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 03:39:45] 2026-01-11 08:38:50,841 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 03:39:45] 2026-01-11 08:38:50,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 03:39:45] 2026-01-11 08:38:50,841 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 03:39:45] 2026-01-11 08:38:50,841 | INFO     | job 6965941365 has completed (purged errors)
[2026-01-11 03:39:45] 2026-01-11 08:38:50,841 | INFO     | overall cleanup function is called
[2026-01-11 03:39:45] 2026-01-11 08:38:51,852 | INFO     | --- collectZombieJob: --- 10, [101066]
[2026-01-11 03:39:45] 2026-01-11 08:38:51,852 | INFO     | zombie collector waiting for pid 101066
[2026-01-11 03:39:45] 2026-01-11 08:38:51,852 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 03:39:45] 2026-01-11 08:38:51,852 | INFO     | collected zombie processes
[2026-01-11 03:39:45] 2026-01-11 08:38:51,852 | INFO     | will attempt to kill all subprocesses of pid=101066
[2026-01-11 03:39:45] 2026-01-11 08:38:53,489 | INFO     | process IDs to be killed: [101066] (in reverse order)
[2026-01-11 03:39:45] 2026-01-11 08:38:53,725 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 03:39:45] 2026-01-11 08:38:53,727 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 03:39:45] 2026-01-11 08:38:53,776 | INFO     | did not find any defunct processes belonging to 101066
[2026-01-11 03:39:45] 2026-01-11 08:38:53,810 | INFO     | did not find any defunct processes belonging to 101066
[2026-01-11 03:39:45] 2026-01-11 08:38:53,810 | INFO     | ready for new job
[2026-01-11 03:39:45] 2026-01-11 08:38:53,810 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 03:39:45] 2026-01-11 08:38:53,812 | INFO     | ***************************************
[2026-01-11 03:39:45] 2026-01-11 08:38:53,812 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 03:39:45] 2026-01-11 08:38:53,812 | INFO     | ***************************************
[2026-01-11 03:39:45] 2026-01-11 08:38:53,813 | INFO     | 
[2026-01-11 03:39:45] 2026-01-11 08:38:53,818 | INFO     | architecture information:
[2026-01-11 03:39:45] 2026-01-11 08:38:53,819 | INFO     | executing command: cat /etc/os-release
[2026-01-11 03:39:45] 2026-01-11 08:38:53,916 | INFO     | cat /etc/os-release:
[2026-01-11 03:39:45] NAME="CentOS Linux"
[2026-01-11 03:39:45] VERSION="7 (Core)"
[2026-01-11 03:39:45] ID="centos"
[2026-01-11 03:39:45] ID_LIKE="rhel fedora"
[2026-01-11 03:39:45] VERSION_ID="7"
[2026-01-11 03:39:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 03:39:45] ANSI_COLOR="0;31"
[2026-01-11 03:39:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 03:39:45] HOME_URL="https://www.centos.org/"
[2026-01-11 03:39:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 03:39:45] 
[2026-01-11 03:39:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 03:39:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 03:39:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 03:39:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 03:39:45] 
[2026-01-11 03:39:45] 2026-01-11 08:38:53,916 | INFO     | ***************************************
[2026-01-11 03:39:45] 2026-01-11 08:38:54,420 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-11 03:39:45] 2026-01-11 08:38:54,518 | INFO     | sufficient remaining disk space (88952799232 B)
[2026-01-11 03:39:45] 2026-01-11 08:38:54,518 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 03:39:45] 2026-01-11 08:38:54,519 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 03:39:45] 2026-01-11 08:38:54,519 | INFO     | update_server=False
[2026-01-11 03:39:45] 2026-01-11 08:38:54,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 03:39:45] 2026-01-11 08:38:54,520 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 03:39:45] 2026-01-11 08:38:54,520 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 03:39:45] 2026-01-11 08:38:54,983 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 03:39:45] 2026-01-11 08:38:54,983 | INFO     | aborting loop
[2026-01-11 03:39:45] 2026-01-11 08:38:55,102 | INFO     | all job control threads have been joined
[2026-01-11 03:39:45] 2026-01-11 08:38:55,234 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 03:39:45] 2026-01-11 08:38:55,257 | INFO     | all data control threads have been joined
[2026-01-11 03:39:45] 2026-01-11 08:38:55,525 | INFO     | [job] retrieve thread has finished
[2026-01-11 03:39:45] 2026-01-11 08:38:55,665 | INFO     | all payload control threads have been joined
[2026-01-11 03:39:45] 2026-01-11 08:38:55,746 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 03:39:45] 2026-01-11 08:38:55,748 | INFO     | [data] copytool_in thread has finished
[2026-01-11 03:39:45] 2026-01-11 08:38:55,752 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 03:39:45] 2026-01-11 08:38:55,806 | INFO     | [job] validate thread has finished
[2026-01-11 03:39:45] 2026-01-11 08:38:55,940 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 03:39:45] 2026-01-11 08:38:55,989 | INFO     | [job] job monitor thread has finished
[2026-01-11 03:39:45] 2026-01-11 08:38:56,108 | INFO     | [job] control thread has finished
[2026-01-11 03:39:45] 2026-01-11 08:38:56,221 | INFO     | [payload] validate_post thread has finished
[2026-01-11 03:39:45] 2026-01-11 08:38:56,240 | INFO     | [job] queue monitor thread has finished
[2026-01-11 03:39:45] 2026-01-11 08:38:56,263 | INFO     | [data] control thread has finished
[2026-01-11 03:39:45] 2026-01-11 08:38:56,467 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 03:39:45] 2026-01-11 08:38:56,527 | INFO     | [data] copytool_out thread has finished
[2026-01-11 03:39:45] 2026-01-11 08:38:56,671 | INFO     | [payload] control thread has finished
[2026-01-11 03:39:45] 2026-01-11 08:38:56,793 | INFO     | [payload] failed_post thread has finished
[2026-01-11 03:39:45] 2026-01-11 08:38:58,529 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 03:39:45] 2026-01-11 08:39:23,090 | INFO     | PID=87920 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 03:39:45] 2026-01-11 08:39:23,090 | INFO     | .. there are 77 such processes running
[2026-01-11 03:39:45] 2026-01-11 08:39:23,091 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 03:39:45] 2026-01-11 08:39:23,091 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 03:39:45] 2026-01-11 08:39:23,091 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 03:39:45] 2026-01-11 08:39:37,498 | INFO     | [monitor] cgroup control has ended
[2026-01-11 03:39:45] 2026-01-11 08:39:39,243 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139667854133056)>', '<ExcThread(monitor, started 139667496232704)>']
[2026-01-11 03:39:45] 2026-01-11 08:39:40,200 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 03:39:45] 2026-01-11 08:39:40,200 | INFO     | [monitor] control thread has ended
[2026-01-11 03:39:45] 2026-01-11 08:39:44,272 | INFO     | all workflow threads have been joined
[2026-01-11 03:39:45] 2026-01-11 08:39:44,272 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 03:39:45] 2026-01-11 08:39:44,272 | INFO     | traces error code: 0
[2026-01-11 03:39:45] 2026-01-11 08:39:44,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 03:39:45] 2026-01-11 08:39:44,538 [wrapper] ==== pilot stdout END ====
[2026-01-11 03:39:45] 2026-01-11 08:39:44,552 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 03:39:45] 2026-01-11 08:39:44,562 [wrapper] pilotpid: 87920
[2026-01-11 03:39:45] 2026-01-11 08:39:44,566 [wrapper] Pilot exit status: 0
[2026-01-11 03:39:45] 2026-01-11 08:39:44,618 [wrapper] pandaids: 6965941365
[2026-01-11 03:39:45] 2026-01-11 08:39:44,861 [wrapper] cleanup supervisor_pilot 1579315 87921
[2026-01-11 03:39:45] 2026-01-11 08:39:44,892 [wrapper] Test setup, not cleaning
[2026-01-11 03:39:45] 2026-01-11 08:39:44,917 [wrapper] apfmon messages muted
[2026-01-11 03:39:45] 2026-01-11 08:39:44,920 [wrapper] ==== wrapper stdout END ====
[2026-01-11 03:39:45] 2026-01-11 08:39:44,922 [wrapper] ==== wrapper stderr END ====
[2026-01-11 03:39:45]  *** Error codes and diagnostics ***
[2026-01-11 03:39:45]     "exeErrorCode": 0,
[2026-01-11 03:39:45]     "exeErrorDiag": "",
[2026-01-11 03:39:45]     "pilotErrorCode": 0,
[2026-01-11 03:39:45]     "pilotErrorDiag": "",
[2026-01-11 03:39:45]  *** Listing of results directory ***
[2026-01-11 03:39:45] total 1143464
[2026-01-11 03:39:45] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-11 03:39:45] -rwx------. 1 boincer umatlas     36322 Jan 10 22:33 runpilot2-wrapper.sh
[2026-01-11 03:39:45] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 22:33 queuedata.json
[2026-01-11 03:39:45] -rw-r--r--. 1 boincer umatlas       100 Jan 10 23:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 03:39:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 23:13 run_atlas
[2026-01-11 03:39:45] -rw-r--r--. 1 boincer umatlas       105 Jan 10 23:13 job.xml
[2026-01-11 03:39:45] -rw-r--r--. 2 boincer umatlas 915501182 Jan 10 23:13 EVNT.48039248._000028.pool.root.1
[2026-01-11 03:39:45] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 23:13 start_atlas.sh
[2026-01-11 03:39:45] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 23:13 shared
[2026-01-11 03:39:45] -rw-r--r--. 2 boincer umatlas    592413 Jan 10 23:13 input.tar.gz
[2026-01-11 03:39:45] -rw-r--r--. 1 boincer umatlas         0 Jan 10 23:13 boinc_lockfile
[2026-01-11 03:39:45] -rw-r--r--. 1 boincer umatlas      2590 Jan 10 23:13 pandaJob.out
[2026-01-11 03:39:45] -rw-------. 1 boincer umatlas        57 Jan 10 23:13 setup.sh.local
[2026-01-11 03:39:45] -rw-------. 1 boincer umatlas    989548 Jan 10 23:15 agis_schedconf.cvmfs.json
[2026-01-11 03:39:45] drwx------. 5 boincer umatlas      4096 Jan 10 23:15 pilot3
[2026-01-11 03:39:45] -rw-------. 1 boincer umatlas 246859125 Jan 11 03:37 HITS.48039250._006929.pool.root.1
[2026-01-11 03:39:45] -rw-r--r--. 1 boincer umatlas       532 Jan 11 03:37 boinc_task_state.xml
[2026-01-11 03:39:45] -rw-------. 1 boincer umatlas      1043 Jan 11 03:38 memory_monitor_summary.json
[2026-01-11 03:39:45] -rw-------. 1 boincer umatlas   1516240 Jan 11 03:38 agis_ddmendpoints.agis.ALL.json
[2026-01-11 03:39:45] -rw-------. 1 boincer umatlas    473052 Jan 11 03:38 log.48039250._006929.job.log.tgz.1
[2026-01-11 03:39:45] -rw-r--r--. 1 boincer umatlas      6864 Jan 11 03:38 init_data.xml
[2026-01-11 03:39:45] -rw-------. 1 boincer umatlas      7821 Jan 11 03:38 heartbeat.json
[2026-01-11 03:39:45] -rw-------. 1 boincer umatlas        95 Jan 11 03:39 pilot_heartbeat.json
[2026-01-11 03:39:45] -rw-r--r--. 1 boincer umatlas        28 Jan 11 03:39 wrapper_checkpoint.txt
[2026-01-11 03:39:45] -rw-------. 1 boincer umatlas      4822 Jan 11 03:39 pilotlog.txt
[2026-01-11 03:39:45] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 03:39 boinc_mmap_file
[2026-01-11 03:39:45] -rw-------. 1 boincer umatlas   1838634 Jan 11 03:39 log.48039250._006929.job.log.1
[2026-01-11 03:39:45] -rw-------. 1 boincer umatlas       357 Jan 11 03:39 output.list
[2026-01-11 03:39:45] -rw-r--r--. 1 boincer umatlas       620 Jan 11 03:39 runtime_log
[2026-01-11 03:39:45] -rw-------. 1 boincer umatlas   2334720 Jan 11 03:39 result.tar.gz
[2026-01-11 03:39:45] -rw-r--r--. 1 boincer umatlas      9338 Jan 11 03:39 runtime_log.err
[2026-01-11 03:39:45] -rw-------. 1 boincer umatlas       656 Jan 11 03:39 MnOMDmMO1y8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwghKDmBoCy2n.diag
[2026-01-11 03:39:45] -rw-r--r--. 1 boincer umatlas     21442 Jan 11 03:39 stderr.txt
[2026-01-11 03:39:45] HITS file was successfully produced:
[2026-01-11 03:39:45] -rw-------. 1 boincer umatlas 246859125 Jan 11 03:37 shared/HITS.pool.root.1
[2026-01-11 03:39:45]  *** Contents of shared directory: ***
[2026-01-11 03:39:45] total 1138008
[2026-01-11 03:39:45] -rw-r--r--. 2 boincer umatlas 915501182 Jan 10 23:13 ATLAS.root_0
[2026-01-11 03:39:45] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 23:13 start_atlas.sh
[2026-01-11 03:39:45] -rw-r--r--. 2 boincer umatlas    592413 Jan 10 23:13 input.tar.gz
[2026-01-11 03:39:45] -rw-------. 1 boincer umatlas 246859125 Jan 11 03:37 HITS.pool.root.1
[2026-01-11 03:39:45] -rw-------. 1 boincer umatlas   2334720 Jan 11 03:39 result.tar.gz
03:40:06 (82563): run_atlas exited; CPU time 58805.525718
03:40:06 (82563): called boinc_finish(0)

</stderr_txt>
]]>

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