Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:38:57 (3690): wrapper (7.7.26015): starting
22:38:57 (3690): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 22:38:57] Arguments: --nthreads 8
[2026-01-10 22:38:57] Threads: 8
[2026-01-10 22:38:57] Checking for CVMFS
[2026-01-10 22:38:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 22:38:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 22:38:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 22:38:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 22:38:57] 2.11.2.0 2873 126110 90972 155002 1 1 20101934 20275201 1 130560 0 31339545 99.824 7669158 35986 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 22:38:57] CVMFS is ok
[2026-01-10 22:38:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 22:38:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 22:38:57] Further information can be found at the LHC@home message board.
[2026-01-10 22:38:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 22:38:57] Checking for apptainer binary...
[2026-01-10 22:38:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 22:38:57] Running /usr/bin/apptainer --version
[2026-01-10 22:38:57] apptainer version 1.3.2-1.el7
[2026-01-10 22:38:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 22:38:59] c-115-13.aglt2.org
[2026-01-10 22:38:59] apptainer works
[2026-01-10 22:38:59] Set ATHENA_PROC_NUMBER=8
[2026-01-10 22:38:59] Set ATHENA_CORE_NUMBER=8
[2026-01-10 22:38:59] Starting ATLAS job with PandaID=6965941573
[2026-01-10 22:38:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 01:17:49]  *** The last 200 lines of the pilot log: ***
[2026-01-11 01:17:49] 2026-01-11 06:17:10,800 | INFO     | executing command: lscpu
[2026-01-11 01:17:49] 2026-01-11 06:17:10,827 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 01:17:49] 2026-01-11 06:17:11,411 | INFO     | time since job start (9475s) is within the limit (349056.0s)
[2026-01-11 01:17:49] 2026-01-11 06:17:11,784 | INFO     | monitor loop #696: job 0:6965941573 is in state 'finished'
[2026-01-11 01:17:49] 2026-01-11 06:17:11,785 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 01:17:49] 2026-01-11 06:17:13,414 | INFO     | time since job start (9477s) is within the limit (349056.0s)
[2026-01-11 01:17:49] 2026-01-11 06:17:14,288 | INFO     | monitor loop #697: job 0:6965941573 is in state 'finished'
[2026-01-11 01:17:49] 2026-01-11 06:17:14,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 01:17:49] 2026-01-11 06:17:15,420 | INFO     | time since job start (9479s) is within the limit (349056.0s)
[2026-01-11 01:17:49] 2026-01-11 06:17:16,369 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-11 01:17:49] 2026-01-11 06:17:16,373 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2026-01-11 01:17:49] 2026-01-11 06:17:16,374 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965941573/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 01:17:49] 2026-01-11 06:17:16,375 | INFO     | extracted standard info from prmon json
[2026-01-11 01:17:49] 2026-01-11 06:17:16,375 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 01:17:49] 2026-01-11 06:17:16,375 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 01:17:49] 2026-01-11 06:17:16,375 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 01:17:49] 2026-01-11 06:17:16,376 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 01:17:49] 2026-01-11 06:17:16,378 | INFO     | fitting pss+swap vs Time
[2026-01-11 01:17:49] 2026-01-11 06:17:16,378 | INFO     | sum of square deviations: 1154663510.0
[2026-01-11 01:17:49] 2026-01-11 06:17:16,379 | INFO     | sum of deviations: -324163455.00000244
[2026-01-11 01:17:49] 2026-01-11 06:17:16,379 | INFO     | mean x: 1768107484.0
[2026-01-11 01:17:49] 2026-01-11 06:17:16,379 | INFO     | mean y: 2580891.251612903
[2026-01-11 01:17:49] 2026-01-11 06:17:16,380 | INFO     | intersect: 498964318.85711634
[2026-01-11 01:17:49] 2026-01-11 06:17:16,380 | INFO     | chi2: 1.5184453393276318
[2026-01-11 01:17:49] 2026-01-11 06:17:16,380 | INFO     | sum of square deviations: 1046484737.5
[2026-01-11 01:17:49] 2026-01-11 06:17:16,381 | INFO     | sum of deviations: -177157023.49999952
[2026-01-11 01:17:49] 2026-01-11 06:17:16,381 | INFO     | mean x: 1768107331.5
[2026-01-11 01:17:49] 2026-01-11 06:17:16,381 | INFO     | mean y: 2581096.86
[2026-01-11 01:17:49] 2026-01-11 06:17:16,381 | INFO     | intersect: 301899969.7041125
[2026-01-11 01:17:49] 2026-01-11 06:17:16,381 | INFO     | chi2: 1.5187889917503639
[2026-01-11 01:17:49] 2026-01-11 06:17:16,382 | INFO     | current chi2=1.5187889917503639 (change=-0.022631859957778465 %)
[2026-01-11 01:17:49] 2026-01-11 06:17:16,382 | INFO     | right removable region: 149
[2026-01-11 01:17:49] 2026-01-11 06:17:16,382 | INFO     | sum of square deviations: 1046484737.5
[2026-01-11 01:17:49] 2026-01-11 06:17:16,383 | INFO     | sum of deviations: -23010958843.5
[2026-01-11 01:17:49] 2026-01-11 06:17:16,383 | INFO     | mean x: 1768107636.5
[2026-01-11 01:17:49] 2026-01-11 06:17:16,383 | INFO     | mean y: 2612386.1266666665
[2026-01-11 01:17:49] 2026-01-11 06:17:16,383 | INFO     | intersect: 38881203345.39477
[2026-01-11 01:17:49] 2026-01-11 06:17:16,383 | INFO     | chi2: 0.13856893788230584
[2026-01-11 01:17:49] 2026-01-11 06:17:16,383 | INFO     | current chi2=0.13856893788230584 (change=90.87428870217586 %)
[2026-01-11 01:17:49] 2026-01-11 06:17:16,384 | INFO     | sum of square deviations: 945282840.0
[2026-01-11 01:17:49] 2026-01-11 06:17:16,384 | INFO     | sum of deviations: -20106286128.000004
[2026-01-11 01:17:49] 2026-01-11 06:17:16,384 | INFO     | mean x: 1768107789.0
[2026-01-11 01:17:49] 2026-01-11 06:17:16,384 | INFO     | mean y: 2607969.751724138
[2026-01-11 01:17:49] 2026-01-11 06:17:16,385 | INFO     | intersect: 37610485322.92515
[2026-01-11 01:17:49] 2026-01-11 06:17:16,385 | INFO     | chi2: 0.13461793088407942
[2026-01-11 01:17:49] 2026-01-11 06:17:16,385 | INFO     | current chi2=0.13461793088407942 (change=2.851293412945281 %)
[2026-01-11 01:17:49] 2026-01-11 06:17:16,385 | INFO     | left removable region: 20
[2026-01-11 01:17:49] 2026-01-11 06:17:16,385 | INFO     | sum of square deviations: 665612480.0
[2026-01-11 01:17:49] 2026-01-11 06:17:16,386 | INFO     | sum of deviations: -10185889677.999998
[2026-01-11 01:17:49] 2026-01-11 06:17:16,386 | INFO     | mean x: 1768107911.0
[2026-01-11 01:17:49] 2026-01-11 06:17:16,386 | INFO     | mean y: 2592804.093023256
[2026-01-11 01:17:49] 2026-01-11 06:17:16,386 | INFO     | intersect: 27060006331.322918
[2026-01-11 01:17:49] 2026-01-11 06:17:16,386 | INFO     | chi2: 0.10383113016329962
[2026-01-11 01:17:49] 2026-01-11 06:17:16,387 | INFO     | current memory leak: -15.30 B/s (using 129 data points, chi2=0.10)
[2026-01-11 01:17:49] 2026-01-11 06:17:16,387 | INFO     | could have reported an average CPU frequency of 2204 MHz (9 samples)
[2026-01-11 01:17:49] 2026-01-11 06:17:16,387 | INFO     | ..............................
[2026-01-11 01:17:49] 2026-01-11 06:17:16,387 | INFO     | . Timing measurements:
[2026-01-11 01:17:49] 2026-01-11 06:17:16,387 | INFO     | . get job = 0 s
[2026-01-11 01:17:49] 2026-01-11 06:17:16,387 | INFO     | . initial setup = 2 s
[2026-01-11 01:17:49] 2026-01-11 06:17:16,387 | INFO     | . payload setup = 8 s
[2026-01-11 01:17:49] 2026-01-11 06:17:16,388 | INFO     | . stage-in = 0 s
[2026-01-11 01:17:49] 2026-01-11 06:17:16,388 | INFO     | . payload execution = 9443 s
[2026-01-11 01:17:49] 2026-01-11 06:17:16,388 | INFO     | . stage-out = 0 s
[2026-01-11 01:17:49] 2026-01-11 06:17:16,388 | INFO     | . log creation = 0 s
[2026-01-11 01:17:49] 2026-01-11 06:17:16,388 | INFO     | ..............................
[2026-01-11 01:17:49] 2026-01-11 06:17:16,470 | INFO     | 
[2026-01-11 01:17:49] 2026-01-11 06:17:16,470 | INFO     | job summary report
[2026-01-11 01:17:49] 2026-01-11 06:17:16,470 | INFO     | --------------------------------------------------
[2026-01-11 01:17:49] 2026-01-11 06:17:16,470 | INFO     | PanDA job id: 6965941573
[2026-01-11 01:17:49] 2026-01-11 06:17:16,470 | INFO     | task id: 48039250
[2026-01-11 01:17:49] 2026-01-11 06:17:16,470 | INFO     | errors: (none)
[2026-01-11 01:17:49] 2026-01-11 06:17:16,470 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 01:17:49] 2026-01-11 06:17:16,470 | INFO     | pilot state: finished 
[2026-01-11 01:17:49] 2026-01-11 06:17:16,471 | INFO     | transexitcode: 0
[2026-01-11 01:17:49] 2026-01-11 06:17:16,471 | INFO     | exeerrorcode: 0
[2026-01-11 01:17:49] 2026-01-11 06:17:16,471 | INFO     | exeerrordiag: 
[2026-01-11 01:17:49] 2026-01-11 06:17:16,471 | INFO     | exitcode: 0
[2026-01-11 01:17:49] 2026-01-11 06:17:16,471 | INFO     | exitmsg: OK
[2026-01-11 01:17:49] 2026-01-11 06:17:16,471 | INFO     | cpuconsumptiontime: 71291 s
[2026-01-11 01:17:49] 2026-01-11 06:17:16,472 | INFO     | nevents: 400
[2026-01-11 01:17:49] 2026-01-11 06:17:16,472 | INFO     | neventsw: 0
[2026-01-11 01:17:49] 2026-01-11 06:17:16,472 | INFO     | pid: 14755
[2026-01-11 01:17:49] 2026-01-11 06:17:16,472 | INFO     | pgrp: 14755
[2026-01-11 01:17:49] 2026-01-11 06:17:16,472 | INFO     | corecount: 8
[2026-01-11 01:17:49] 2026-01-11 06:17:16,472 | INFO     | event service: False
[2026-01-11 01:17:49] 2026-01-11 06:17:16,473 | INFO     | sizes: {0: 2284028, 1: 2284028, 6: 2284318, 11: 2284346, 9455: 2312723, 9456: 2321721, 9457: 2321905, 9463: 2322163}
[2026-01-11 01:17:49] 2026-01-11 06:17:16,473 | INFO     | --------------------------------------------------
[2026-01-11 01:17:49] 2026-01-11 06:17:16,473 | INFO     | 
[2026-01-11 01:17:49] 2026-01-11 06:17:16,473 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 01:17:49] 2026-01-11 06:17:16,496 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 01:17:49] 2026-01-11 06:17:16,497 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 01:17:49] 2026-01-11 06:17:16,497 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 01:17:49] 2026-01-11 06:17:16,497 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 01:17:49] 2026-01-11 06:17:16,497 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 01:17:49] 2026-01-11 06:17:16,497 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 01:17:49] 2026-01-11 06:17:16,497 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 01:17:49] 2026-01-11 06:17:16,497 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 01:17:49] 2026-01-11 06:17:16,498 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 01:17:49] 2026-01-11 06:17:16,498 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 01:17:49] 2026-01-11 06:17:16,498 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 01:17:49] 2026-01-11 06:17:16,498 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 01:17:49] 2026-01-11 06:17:16,498 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 01:17:49] 2026-01-11 06:17:16,499 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 01:17:49] 2026-01-11 06:17:16,499 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 01:17:49] 2026-01-11 06:17:16,499 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 01:17:49] 2026-01-11 06:17:16,499 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 01:17:49] 2026-01-11 06:17:16,499 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 01:17:49] 2026-01-11 06:17:16,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 01:17:49] 2026-01-11 06:17:16,500 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 01:17:49] 2026-01-11 06:17:16,500 | INFO     | job 6965941573 has completed (purged errors)
[2026-01-11 01:17:49] 2026-01-11 06:17:16,500 | INFO     | overall cleanup function is called
[2026-01-11 01:17:49] 2026-01-11 06:17:16,586 | INFO     | PID=7472 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-11 01:17:49] 2026-01-11 06:17:17,509 | INFO     | --- collectZombieJob: --- 10, [14755]
[2026-01-11 01:17:49] 2026-01-11 06:17:17,510 | INFO     | zombie collector waiting for pid 14755
[2026-01-11 01:17:49] 2026-01-11 06:17:17,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 01:17:49] 2026-01-11 06:17:17,510 | INFO     | collected zombie processes
[2026-01-11 01:17:49] 2026-01-11 06:17:17,510 | INFO     | will attempt to kill all subprocesses of pid=14755
[2026-01-11 01:17:49] 2026-01-11 06:17:17,589 | INFO     | process IDs to be killed: [14755] (in reverse order)
[2026-01-11 01:17:49] 2026-01-11 06:17:17,641 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 01:17:49] 2026-01-11 06:17:17,641 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 01:17:49] 2026-01-11 06:17:17,645 | INFO     | did not find any defunct processes belonging to 14755
[2026-01-11 01:17:49] 2026-01-11 06:17:17,649 | INFO     | did not find any defunct processes belonging to 14755
[2026-01-11 01:17:49] 2026-01-11 06:17:17,649 | INFO     | ready for new job
[2026-01-11 01:17:49] 2026-01-11 06:17:17,649 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 01:17:49] 2026-01-11 06:17:17,651 | INFO     | ***************************************
[2026-01-11 01:17:49] 2026-01-11 06:17:17,651 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 01:17:49] 2026-01-11 06:17:17,652 | INFO     | ***************************************
[2026-01-11 01:17:49] 2026-01-11 06:17:17,652 | INFO     | 
[2026-01-11 01:17:49] 2026-01-11 06:17:17,652 | INFO     | architecture information:
[2026-01-11 01:17:49] 2026-01-11 06:17:17,653 | INFO     | executing command: cat /etc/os-release
[2026-01-11 01:17:49] 2026-01-11 06:17:17,669 | INFO     | cat /etc/os-release:
[2026-01-11 01:17:49] NAME="CentOS Linux"
[2026-01-11 01:17:49] VERSION="7 (Core)"
[2026-01-11 01:17:49] ID="centos"
[2026-01-11 01:17:49] ID_LIKE="rhel fedora"
[2026-01-11 01:17:49] VERSION_ID="7"
[2026-01-11 01:17:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 01:17:49] ANSI_COLOR="0;31"
[2026-01-11 01:17:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 01:17:49] HOME_URL="https://www.centos.org/"
[2026-01-11 01:17:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 01:17:49] 
[2026-01-11 01:17:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 01:17:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 01:17:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 01:17:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 01:17:49] 
[2026-01-11 01:17:49] 2026-01-11 06:17:17,670 | INFO     | ***************************************
[2026-01-11 01:17:49] 2026-01-11 06:17:18,171 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 01:17:49] 2026-01-11 06:17:18,191 | INFO     | sufficient remaining disk space (17111711744 B)
[2026-01-11 01:17:49] 2026-01-11 06:17:18,192 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 01:17:49] 2026-01-11 06:17:18,192 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 01:17:49] 2026-01-11 06:17:18,192 | INFO     | update_server=False
[2026-01-11 01:17:49] 2026-01-11 06:17:18,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 01:17:49] 2026-01-11 06:17:18,193 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 01:17:49] 2026-01-11 06:17:18,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 01:17:49] 2026-01-11 06:17:18,194 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 01:17:49] 2026-01-11 06:17:18,194 | INFO     | aborting loop
[2026-01-11 01:17:49] 2026-01-11 06:17:18,562 | INFO     | all data control threads have been joined
[2026-01-11 01:17:49] 2026-01-11 06:17:18,866 | INFO     | all job control threads have been joined
[2026-01-11 01:17:49] 2026-01-11 06:17:19,199 | INFO     | [job] retrieve thread has finished
[2026-01-11 01:17:49] 2026-01-11 06:17:19,200 | INFO     | [job] queue monitor thread has finished
[2026-01-11 01:17:49] 2026-01-11 06:17:19,200 | INFO     | [job] job monitor thread has finished
[2026-01-11 01:17:49] 2026-01-11 06:17:19,365 | INFO     | all payload control threads have been joined
[2026-01-11 01:17:49] 2026-01-11 06:17:19,517 | INFO     | [payload] validate_post thread has finished
[2026-01-11 01:17:49] 2026-01-11 06:17:19,568 | INFO     | [data] control thread has finished
[2026-01-11 01:17:49] 2026-01-11 06:17:19,647 | INFO     | [job] validate thread has finished
[2026-01-11 01:17:49] 2026-01-11 06:17:19,781 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 01:17:49] 2026-01-11 06:17:19,873 | INFO     | [job] control thread has finished
[2026-01-11 01:17:49] 2026-01-11 06:17:20,201 | INFO     | [data] copytool_out thread has finished
[2026-01-11 01:17:49] 2026-01-11 06:17:20,208 | INFO     | [data] copytool_in thread has finished
[2026-01-11 01:17:49] 2026-01-11 06:17:20,288 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 01:17:49] 2026-01-11 06:17:20,288 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 01:17:49] 2026-01-11 06:17:20,332 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 01:17:49] 2026-01-11 06:17:20,371 | INFO     | [payload] control thread has finished
[2026-01-11 01:17:49] 2026-01-11 06:17:20,446 | INFO     | [payload] failed_post thread has finished
[2026-01-11 01:17:49] 2026-01-11 06:17:21,307 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 01:17:49] 2026-01-11 06:17:25,309 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 01:17:49] 2026-01-11 06:17:31,698 | INFO     | [monitor] cgroup control has ended
[2026-01-11 01:17:49] 2026-01-11 06:17:32,989 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140335706068800)>', '<ExcThread(monitor, started 140334860314368)>']
[2026-01-11 01:17:49] 2026-01-11 06:17:38,015 | INFO     | all workflow threads have been joined
[2026-01-11 01:17:49] 2026-01-11 06:17:38,015 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 01:17:49] 2026-01-11 06:17:38,016 | INFO     | traces error code: 0
[2026-01-11 01:17:49] 2026-01-11 06:17:38,016 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 01:17:49] 2026-01-11 06:17:48,699 | INFO     | PID=7472 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-11 01:17:49] 2026-01-11 06:17:48,700 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 01:17:49] 2026-01-11 06:17:48,700 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 01:17:49] 2026-01-11 06:17:48,700 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 01:17:49] 2026-01-11 06:17:48,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 01:17:49] 2026-01-11 06:17:48,700 | INFO     | [monitor] control thread has ended
[2026-01-11 01:17:49] 2026-01-11 06:17:48,812 [wrapper] ==== pilot stdout END ====
[2026-01-11 01:17:49] 2026-01-11 06:17:48,816 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 01:17:49] 2026-01-11 06:17:48,821 [wrapper] pilotpid: 7472
[2026-01-11 01:17:49] 2026-01-11 06:17:48,825 [wrapper] Pilot exit status: 0
[2026-01-11 01:17:49] 2026-01-11 06:17:48,843 [wrapper] pandaids: 6965941573
[2026-01-11 01:17:49] 2026-01-11 06:17:48,885 [wrapper] cleanup supervisor_pilot 21144 7473
[2026-01-11 01:17:49] 2026-01-11 06:17:48,891 [wrapper] Test setup, not cleaning
[2026-01-11 01:17:49] 2026-01-11 06:17:48,895 [wrapper] apfmon messages muted
[2026-01-11 01:17:49] 2026-01-11 06:17:48,900 [wrapper] ==== wrapper stdout END ====
[2026-01-11 01:17:49] 2026-01-11 06:17:48,905 [wrapper] ==== wrapper stderr END ====
[2026-01-11 01:17:49]  *** Error codes and diagnostics ***
[2026-01-11 01:17:49]     "exeErrorCode": 0,
[2026-01-11 01:17:49]     "exeErrorDiag": "",
[2026-01-11 01:17:49]     "pilotErrorCode": 0,
[2026-01-11 01:17:49]     "pilotErrorDiag": "",
[2026-01-11 01:17:49]  *** Listing of results directory ***
[2026-01-11 01:17:49] total 1152524
[2026-01-11 01:17:49] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-11 01:17:49] -rwx------ 1 boincer umatlas     36322 Jan 10 22:33 runpilot2-wrapper.sh
[2026-01-11 01:17:49] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 22:33 queuedata.json
[2026-01-11 01:17:49] -rw-r--r-- 1 boincer umatlas       100 Jan 10 22:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 01:17:49] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 22:38 run_atlas
[2026-01-11 01:17:49] -rw-r--r-- 1 boincer umatlas       105 Jan 10 22:38 job.xml
[2026-01-11 01:17:49] -rw-r--r-- 2 boincer umatlas 916416990 Jan 10 22:38 EVNT.48039248._000054.pool.root.1
[2026-01-11 01:17:49] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 22:38 start_atlas.sh
[2026-01-11 01:17:49] drwxrwx--x 2 boincer umatlas      4096 Jan 10 22:38 shared
[2026-01-11 01:17:49] -rw-r--r-- 2 boincer umatlas    592417 Jan 10 22:38 input.tar.gz
[2026-01-11 01:17:49] -rw-r--r-- 1 boincer umatlas         0 Jan 10 22:38 boinc_lockfile
[2026-01-11 01:17:49] -rw-r--r-- 1 boincer umatlas      2593 Jan 10 22:38 pandaJob.out
[2026-01-11 01:17:49] -rw------- 1 boincer umatlas        57 Jan 10 22:39 setup.sh.local
[2026-01-11 01:17:49] -rw------- 1 boincer umatlas    989548 Jan 10 22:39 agis_schedconf.cvmfs.json
[2026-01-11 01:17:49] -rw------- 1 boincer umatlas   1516240 Jan 10 22:39 agis_ddmendpoints.agis.ALL.json
[2026-01-11 01:17:49] drwx------ 5 boincer umatlas      4096 Jan 10 22:39 pilot3
[2026-01-11 01:17:49] -rw-r--r-- 1 boincer umatlas      5909 Jan 11 01:13 init_data.xml
[2026-01-11 01:17:49] -rw------- 1 boincer umatlas 256370403 Jan 11 01:16 HITS.48039250._007041.pool.root.1
[2026-01-11 01:17:49] -rw-r--r-- 1 boincer umatlas       531 Jan 11 01:16 boinc_task_state.xml
[2026-01-11 01:17:49] -rw------- 1 boincer umatlas      1048 Jan 11 01:17 memory_monitor_summary.json
[2026-01-11 01:17:49] -rw------- 1 boincer umatlas    419109 Jan 11 01:17 log.48039250._007041.job.log.tgz.1
[2026-01-11 01:17:49] -rw------- 1 boincer umatlas      7842 Jan 11 01:17 heartbeat.json
[2026-01-11 01:17:49] -rw-r--r-- 1 boincer umatlas      8192 Jan 11 01:17 boinc_mmap_file
[2026-01-11 01:17:49] -rw-r--r-- 1 boincer umatlas        27 Jan 11 01:17 wrapper_checkpoint.txt
[2026-01-11 01:17:49] -rw------- 1 boincer umatlas        95 Jan 11 01:17 pilot_heartbeat.json
[2026-01-11 01:17:49] -rw------- 1 boincer umatlas       744 Jan 11 01:17 pilotlog.txt
[2026-01-11 01:17:49] -rw------- 1 boincer umatlas   1320192 Jan 11 01:17 log.48039250._007041.job.log.1
[2026-01-11 01:17:49] -rw------- 1 boincer umatlas       357 Jan 11 01:17 output.list
[2026-01-11 01:17:49] -rw-r--r-- 1 boincer umatlas       620 Jan 11 01:17 runtime_log
[2026-01-11 01:17:49] -rw------- 1 boincer umatlas   1761280 Jan 11 01:17 result.tar.gz
[2026-01-11 01:17:49] -rw-r--r-- 1 boincer umatlas      9342 Jan 11 01:17 runtime_log.err
[2026-01-11 01:17:49] -rw------- 1 boincer umatlas       661 Jan 11 01:17 lkrKDmMO1y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6ymKDml2xZOm.diag
[2026-01-11 01:17:49] -rw-r--r-- 1 boincer umatlas     21465 Jan 11 01:17 stderr.txt
[2026-01-11 01:17:49] HITS file was successfully produced:
[2026-01-11 01:17:49] -rw------- 1 boincer umatlas 256370403 Jan 11 01:16 shared/HITS.pool.root.1
[2026-01-11 01:17:49]  *** Contents of shared directory: ***
[2026-01-11 01:17:49] total 1147628
[2026-01-11 01:17:49] -rw-r--r-- 2 boincer umatlas 916416990 Jan 10 22:38 ATLAS.root_0
[2026-01-11 01:17:49] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 22:38 start_atlas.sh
[2026-01-11 01:17:49] -rw-r--r-- 2 boincer umatlas    592417 Jan 10 22:38 input.tar.gz
[2026-01-11 01:17:49] -rw------- 1 boincer umatlas 256370403 Jan 11 01:16 HITS.pool.root.1
[2026-01-11 01:17:49] -rw------- 1 boincer umatlas   1761280 Jan 11 01:17 result.tar.gz
01:17:50 (3690): run_atlas exited; CPU time 71265.182305
01:17:50 (3690): called boinc_finish(0)

</stderr_txt>
]]>

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