Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:37:11 (3952241): wrapper (7.7.26015): starting
22:37:11 (3952241): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 22:37:11] Arguments: --nthreads 8
[2026-01-10 22:37:11] Threads: 8
[2026-01-10 22:37:11] Checking for CVMFS
[2026-01-10 22:37:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 22:37:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 22:37:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 22:37:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 22:37:12] 2.13.3.0 15513 95706 714680 155002 1 225 31332638 40960001 34037 16776704 0 826213518 99.831 356915418 31455 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 22:37:12] CVMFS is ok
[2026-01-10 22:37:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 22:37:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 22:37:12] Further information can be found at the LHC@home message board.
[2026-01-10 22:37:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 22:37:12] Checking for apptainer binary...
[2026-01-10 22:37:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 22:37:12] Running /usr/bin/apptainer --version
[2026-01-10 22:37:12] apptainer version 1.4.5-2.el9
[2026-01-10 22:37:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 22:37:13] c-1-1.aglt2.org
[2026-01-10 22:37:13] apptainer works
[2026-01-10 22:37:13] Set ATHENA_PROC_NUMBER=8
[2026-01-10 22:37:13] Set ATHENA_CORE_NUMBER=8
[2026-01-10 22:37:13] Starting ATLAS job with PandaID=6965941349
[2026-01-10 22:37:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 04:40:24]  *** The last 200 lines of the pilot log: ***
[2026-01-11 04:40:24] 2026-01-11 09:39:44,400 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965941349/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 04:40:24] 2026-01-11 09:39:44,408 | INFO     | extracted standard info from prmon json
[2026-01-11 04:40:24] 2026-01-11 09:39:44,408 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 04:40:24] 2026-01-11 09:39:44,408 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 04:40:24] 2026-01-11 09:39:44,413 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 04:40:24] 2026-01-11 09:39:44,413 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 04:40:24] 2026-01-11 09:39:44,430 | INFO     | fitting pss+swap vs Time
[2026-01-11 04:40:24] 2026-01-11 09:39:44,431 | INFO     | sum of square deviations: 13872524421.166252
[2026-01-11 04:40:24] 2026-01-11 09:39:44,436 | INFO     | sum of deviations: 34066480226.890068
[2026-01-11 04:40:24] 2026-01-11 09:39:44,436 | INFO     | mean x: 1768113514.2422535
[2026-01-11 04:40:24] 2026-01-11 09:39:44,437 | INFO     | mean y: 2565161.6873239437
[2026-01-11 04:40:24] 2026-01-11 09:39:44,437 | INFO     | intersect: -4339355763.672782
[2026-01-11 04:40:24] 2026-01-11 09:39:44,438 | INFO     | chi2: 2.35094756657077
[2026-01-11 04:40:24] 2026-01-11 09:39:44,438 | INFO     | sum of square deviations: 13294574216.857115
[2026-01-11 04:40:24] 2026-01-11 09:39:44,443 | INFO     | sum of deviations: 55771916755.79999
[2026-01-11 04:40:24] 2026-01-11 09:39:44,444 | INFO     | mean x: 1768113361.7428572
[2026-01-11 04:40:24] 2026-01-11 09:39:44,444 | INFO     | mean y: 2570819.72
[2026-01-11 04:40:24] 2026-01-11 09:39:44,444 | INFO     | intersect: -7414821389.870622
[2026-01-11 04:40:24] 2026-01-11 09:39:44,445 | INFO     | chi2: 1.6674004108235274
[2026-01-11 04:40:24] 2026-01-11 09:39:44,445 | INFO     | current chi2=1.6674004108235274 (change=29.075389237383316 %)
[2026-01-11 04:40:24] 2026-01-11 09:39:44,445 | INFO     | sum of square deviations: 12732881793.031868
[2026-01-11 04:40:24] 2026-01-11 09:39:44,449 | INFO     | sum of deviations: 54102413628.83767
[2026-01-11 04:40:24] 2026-01-11 09:39:44,449 | INFO     | mean x: 1768113209.2405796
[2026-01-11 04:40:24] 2026-01-11 09:39:44,450 | INFO     | mean y: 2570366.4115942027
[2026-01-11 04:40:24] 2026-01-11 09:39:44,450 | INFO     | intersect: -7510198050.341902
[2026-01-11 04:40:24] 2026-01-11 09:39:44,451 | INFO     | chi2: 1.6677445022991015
[2026-01-11 04:40:24] 2026-01-11 09:39:44,451 | INFO     | current chi2=1.6677445022991015 (change=-0.020636403430186277 %)
[2026-01-11 04:40:24] 2026-01-11 09:39:44,451 | INFO     | right removable region: 344
[2026-01-11 04:40:24] 2026-01-11 09:39:44,452 | INFO     | sum of square deviations: 13294543168.368505
[2026-01-11 04:40:24] 2026-01-11 09:39:44,457 | INFO     | sum of deviations: -29685402834.10857
[2026-01-11 04:40:24] 2026-01-11 09:39:44,458 | INFO     | mean x: 1768113666.7457142
[2026-01-11 04:40:24] 2026-01-11 09:39:44,458 | INFO     | mean y: 2581895.5942857144
[2026-01-11 04:40:24] 2026-01-11 09:39:44,459 | INFO     | intersect: 3950605215.3215246
[2026-01-11 04:40:24] 2026-01-11 09:39:44,461 | INFO     | chi2: 0.7572133359216402
[2026-01-11 04:40:24] 2026-01-11 09:39:44,461 | INFO     | current chi2=0.7572133359216402 (change=67.79114316759706 %)
[2026-01-11 04:40:24] 2026-01-11 09:39:44,462 | INFO     | sum of square deviations: 12732862396.057997
[2026-01-11 04:40:24] 2026-01-11 09:39:44,468 | INFO     | sum of deviations: -35025293138.98554
[2026-01-11 04:40:24] 2026-01-11 09:39:44,468 | INFO     | mean x: 1768113819.2463768
[2026-01-11 04:40:24] 2026-01-11 09:39:44,468 | INFO     | mean y: 2583329.4115942027
[2026-01-11 04:40:24] 2026-01-11 09:39:44,468 | INFO     | intersect: 4866274060.991976
[2026-01-11 04:40:24] 2026-01-11 09:39:44,469 | INFO     | chi2: 0.7297316331227498
[2026-01-11 04:40:24] 2026-01-11 09:39:44,469 | INFO     | current chi2=0.7297316331227498 (change=3.629321024231713 %)
[2026-01-11 04:40:24] 2026-01-11 09:39:44,469 | INFO     | left removable region: 20
[2026-01-11 04:40:24] 2026-01-11 09:39:44,470 | INFO     | sum of square deviations: 10546331117.246937
[2026-01-11 04:40:24] 2026-01-11 09:39:44,473 | INFO     | sum of deviations: -6844977823.962952
[2026-01-11 04:40:24] 2026-01-11 09:39:44,474 | INFO     | mean x: 1768113788.7469137
[2026-01-11 04:40:24] 2026-01-11 09:39:44,474 | INFO     | mean y: 2587092.537037037
[2026-01-11 04:40:24] 2026-01-11 09:39:44,474 | INFO     | intersect: 1150161499.187668
[2026-01-11 04:40:24] 2026-01-11 09:39:44,475 | INFO     | chi2: 0.028322940281455024
[2026-01-11 04:40:24] 2026-01-11 09:39:44,475 | INFO     | current memory leak: -0.65 B/s (using 324 data points, chi2=0.03)
[2026-01-11 04:40:24] 2026-01-11 09:39:44,476 | INFO     | could have reported an average CPU frequency of 2946 MHz (15 samples)
[2026-01-11 04:40:24] 2026-01-11 09:39:44,477 | INFO     | ..............................
[2026-01-11 04:40:24] 2026-01-11 09:39:44,477 | INFO     | . Timing measurements:
[2026-01-11 04:40:24] 2026-01-11 09:39:44,477 | INFO     | . get job = 0 s
[2026-01-11 04:40:24] 2026-01-11 09:39:44,478 | INFO     | . initial setup = 2 s
[2026-01-11 04:40:24] 2026-01-11 09:39:44,478 | INFO     | . payload setup = 14 s
[2026-01-11 04:40:24] 2026-01-11 09:39:44,478 | INFO     | . stage-in = 0 s
[2026-01-11 04:40:24] 2026-01-11 09:39:44,478 | INFO     | . payload execution = 21644 s
[2026-01-11 04:40:24] 2026-01-11 09:39:44,478 | INFO     | . stage-out = 5 s
[2026-01-11 04:40:24] 2026-01-11 09:39:44,478 | INFO     | . log creation = 0 s
[2026-01-11 04:40:24] 2026-01-11 09:39:44,478 | INFO     | ..............................
[2026-01-11 04:40:24] 2026-01-11 09:39:44,778 | INFO     | 
[2026-01-11 04:40:24] 2026-01-11 09:39:44,779 | INFO     | job summary report
[2026-01-11 04:40:24] 2026-01-11 09:39:44,779 | INFO     | --------------------------------------------------
[2026-01-11 04:40:24] 2026-01-11 09:39:44,779 | INFO     | PanDA job id: 6965941349
[2026-01-11 04:40:24] 2026-01-11 09:39:44,779 | INFO     | task id: 48039250
[2026-01-11 04:40:24] 2026-01-11 09:39:44,779 | INFO     | errors: (none)
[2026-01-11 04:40:24] 2026-01-11 09:39:44,779 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 04:40:24] 2026-01-11 09:39:44,779 | INFO     | pilot state: finished 
[2026-01-11 04:40:24] 2026-01-11 09:39:44,779 | INFO     | transexitcode: 0
[2026-01-11 04:40:24] 2026-01-11 09:39:44,779 | INFO     | exeerrorcode: 0
[2026-01-11 04:40:24] 2026-01-11 09:39:44,779 | INFO     | exeerrordiag: 
[2026-01-11 04:40:24] 2026-01-11 09:39:44,779 | INFO     | exitcode: 0
[2026-01-11 04:40:24] 2026-01-11 09:39:44,779 | INFO     | exitmsg: OK
[2026-01-11 04:40:24] 2026-01-11 09:39:44,779 | INFO     | cpuconsumptiontime: 58009 s
[2026-01-11 04:40:24] 2026-01-11 09:39:44,780 | INFO     | nevents: 400
[2026-01-11 04:40:24] 2026-01-11 09:39:44,780 | INFO     | neventsw: 0
[2026-01-11 04:40:24] 2026-01-11 09:39:44,780 | INFO     | pid: 3973114
[2026-01-11 04:40:24] 2026-01-11 09:39:44,780 | INFO     | pgrp: 3973114
[2026-01-11 04:40:24] 2026-01-11 09:39:44,780 | INFO     | corecount: 8
[2026-01-11 04:40:24] 2026-01-11 09:39:44,780 | INFO     | event service: False
[2026-01-11 04:40:24] 2026-01-11 09:39:44,780 | INFO     | sizes: {0: 2283197, 1: 2284053, 12: 2284053, 15: 2284343, 23: 2284371, 21663: 2318017, 21664: 2318144, 21670: 2327198, 21672: 2327254, 21694: 2327448}
[2026-01-11 04:40:24] 2026-01-11 09:39:44,780 | INFO     | --------------------------------------------------
[2026-01-11 04:40:24] 2026-01-11 09:39:44,780 | INFO     | 
[2026-01-11 04:40:24] 2026-01-11 09:39:44,780 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 04:40:24] 2026-01-11 09:39:44,856 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 04:40:24] 2026-01-11 09:39:44,856 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 04:40:24] 2026-01-11 09:39:44,856 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 04:40:24] 2026-01-11 09:39:44,856 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 04:40:24] 2026-01-11 09:39:44,856 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 04:40:24] 2026-01-11 09:39:44,856 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 04:40:24] 2026-01-11 09:39:44,856 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 04:40:24] 2026-01-11 09:39:44,856 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 04:40:24] 2026-01-11 09:39:44,856 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 04:40:24] 2026-01-11 09:39:44,856 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 04:40:24] 2026-01-11 09:39:44,856 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 04:40:24] 2026-01-11 09:39:44,857 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 04:40:24] 2026-01-11 09:39:44,857 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 04:40:24] 2026-01-11 09:39:44,857 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 04:40:24] 2026-01-11 09:39:44,857 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 04:40:24] 2026-01-11 09:39:44,857 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 04:40:24] 2026-01-11 09:39:44,857 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 04:40:24] 2026-01-11 09:39:44,857 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 04:40:24] 2026-01-11 09:39:44,857 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 04:40:24] 2026-01-11 09:39:44,857 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 04:40:24] 2026-01-11 09:39:44,857 | INFO     | job 6965941349 has completed (purged errors)
[2026-01-11 04:40:24] 2026-01-11 09:39:44,857 | INFO     | overall cleanup function is called
[2026-01-11 04:40:24] 2026-01-11 09:39:45,890 | INFO     | --- collectZombieJob: --- 10, [3973114]
[2026-01-11 04:40:24] 2026-01-11 09:39:45,890 | INFO     | zombie collector waiting for pid 3973114
[2026-01-11 04:40:24] 2026-01-11 09:39:45,890 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 04:40:24] 2026-01-11 09:39:45,890 | INFO     | collected zombie processes
[2026-01-11 04:40:24] 2026-01-11 09:39:45,891 | INFO     | will attempt to kill all subprocesses of pid=3973114
[2026-01-11 04:40:24] 2026-01-11 09:39:45,927 | INFO     | PID=3956774 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 04:40:24] 2026-01-11 09:39:45,927 | INFO     | .. there are 59 such processes running
[2026-01-11 04:40:24] 2026-01-11 09:39:47,346 | INFO     | process IDs to be killed: [3973114] (in reverse order)
[2026-01-11 04:40:24] 2026-01-11 09:39:47,614 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 04:40:24] 2026-01-11 09:39:47,615 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 04:40:24] 2026-01-11 09:39:47,690 | INFO     | did not find any defunct processes belonging to 3973114
[2026-01-11 04:40:24] 2026-01-11 09:39:47,790 | INFO     | did not find any defunct processes belonging to 3973114
[2026-01-11 04:40:24] 2026-01-11 09:39:47,790 | INFO     | ready for new job
[2026-01-11 04:40:24] 2026-01-11 09:39:47,790 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 04:40:24] 2026-01-11 09:39:47,808 | INFO     | ***************************************
[2026-01-11 04:40:24] 2026-01-11 09:39:47,808 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 04:40:24] 2026-01-11 09:39:47,808 | INFO     | ***************************************
[2026-01-11 04:40:24] 2026-01-11 09:39:47,808 | INFO     | 
[2026-01-11 04:40:24] 2026-01-11 09:39:47,827 | INFO     | architecture information:
[2026-01-11 04:40:24] 2026-01-11 09:39:47,837 | INFO     | executing command: cat /etc/os-release
[2026-01-11 04:40:24] 2026-01-11 09:39:47,916 | INFO     | cat /etc/os-release:
[2026-01-11 04:40:24] NAME="CentOS Linux"
[2026-01-11 04:40:24] VERSION="7 (Core)"
[2026-01-11 04:40:24] ID="centos"
[2026-01-11 04:40:24] ID_LIKE="rhel fedora"
[2026-01-11 04:40:24] VERSION_ID="7"
[2026-01-11 04:40:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 04:40:24] ANSI_COLOR="0;31"
[2026-01-11 04:40:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 04:40:24] HOME_URL="https://www.centos.org/"
[2026-01-11 04:40:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 04:40:24] 
[2026-01-11 04:40:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 04:40:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 04:40:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 04:40:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 04:40:24] 
[2026-01-11 04:40:24] 2026-01-11 09:39:47,917 | INFO     | ***************************************
[2026-01-11 04:40:24] 2026-01-11 09:39:48,420 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 04:40:24] 2026-01-11 09:39:48,503 | INFO     | sufficient remaining disk space (104816705536 B)
[2026-01-11 04:40:24] 2026-01-11 09:39:48,509 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 04:40:24] 2026-01-11 09:39:48,509 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 04:40:24] 2026-01-11 09:39:48,509 | INFO     | update_server=False
[2026-01-11 04:40:24] 2026-01-11 09:39:48,509 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 04:40:24] 2026-01-11 09:39:48,588 | INFO     | all job control threads have been joined
[2026-01-11 04:40:24] 2026-01-11 09:39:49,009 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 04:40:24] 2026-01-11 09:39:49,012 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 04:40:24] 2026-01-11 09:39:49,012 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:40:24] 2026-01-11 09:39:49,012 | INFO     | will abort loop
[2026-01-11 04:40:24] 2026-01-11 09:39:49,291 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 04:40:24] 2026-01-11 09:39:49,368 | INFO     | all data control threads have been joined
[2026-01-11 04:40:24] 2026-01-11 09:39:49,515 | INFO     | [job] retrieve thread has finished
[2026-01-11 04:40:24] 2026-01-11 09:39:49,594 | INFO     | [job] control thread has finished
[2026-01-11 04:40:24] 2026-01-11 09:39:49,615 | INFO     | [job] validate thread has finished
[2026-01-11 04:40:24] 2026-01-11 09:39:49,816 | INFO     | [payload] validate_post thread has finished
[2026-01-11 04:40:24] 2026-01-11 09:39:49,858 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:40:24] 2026-01-11 09:39:49,891 | INFO     | all payload control threads have been joined
[2026-01-11 04:40:24] 2026-01-11 09:39:50,018 | INFO     | [job] job monitor thread has finished
[2026-01-11 04:40:24] 2026-01-11 09:39:50,040 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 04:40:24] 2026-01-11 09:39:50,374 | INFO     | [data] control thread has finished
[2026-01-11 04:40:24] 2026-01-11 09:39:50,464 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 04:40:24] 2026-01-11 09:39:50,849 | INFO     | [payload] failed_post thread has finished
[2026-01-11 04:40:24] 2026-01-11 09:39:50,856 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 04:40:24] 2026-01-11 09:39:50,864 | INFO     | [job] queue monitor thread has finished
[2026-01-11 04:40:24] 2026-01-11 09:39:50,893 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 04:40:24] 2026-01-11 09:39:50,893 | INFO     | [data] copytool_in thread has finished
[2026-01-11 04:40:24] 2026-01-11 09:39:50,897 | INFO     | [payload] control thread has finished
[2026-01-11 04:40:24] 2026-01-11 09:39:51,222 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 04:40:24] 2026-01-11 09:39:51,298 | INFO     | [data] copytool_out thread has finished
[2026-01-11 04:40:24] 2026-01-11 09:39:55,231 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 04:40:24] 2026-01-11 09:40:16,802 | INFO     | [monitor] cgroup control has ended
[2026-01-11 04:40:24] 2026-01-11 09:40:18,481 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140180878448448)>', '<ExcThread(monitor, started 140180384102144)>']
[2026-01-11 04:40:24] 2026-01-11 09:40:19,750 | INFO     | PID=3956774 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 04:40:24] 2026-01-11 09:40:19,750 | INFO     | .. there are 59 such processes running
[2026-01-11 04:40:24] 2026-01-11 09:40:19,751 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 04:40:24] 2026-01-11 09:40:19,751 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 04:40:24] 2026-01-11 09:40:19,751 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 04:40:24] 2026-01-11 09:40:19,751 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 04:40:24] 2026-01-11 09:40:19,751 | INFO     | [monitor] control thread has ended
[2026-01-11 04:40:24] 2026-01-11 09:40:23,507 | INFO     | all workflow threads have been joined
[2026-01-11 04:40:24] 2026-01-11 09:40:23,507 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 04:40:24] 2026-01-11 09:40:23,507 | INFO     | traces error code: 0
[2026-01-11 04:40:24] 2026-01-11 09:40:23,507 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 04:40:24] 2026-01-11 09:40:24,146 [wrapper] ==== pilot stdout END ====
[2026-01-11 04:40:24] 2026-01-11 09:40:24,163 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 04:40:24] 2026-01-11 09:40:24,188 [wrapper] pilotpid: 3956774
[2026-01-11 04:40:24] 2026-01-11 09:40:24,199 [wrapper] Pilot exit status: 0
[2026-01-11 04:40:24] 2026-01-11 09:40:24,249 [wrapper] pandaids: 6965941349
[2026-01-11 04:40:24] 2026-01-11 09:40:24,427 [wrapper] cleanup supervisor_pilot 1433453 3956775
[2026-01-11 04:40:24] 2026-01-11 09:40:24,432 [wrapper] Test setup, not cleaning
[2026-01-11 04:40:24] 2026-01-11 09:40:24,435 [wrapper] apfmon messages muted
[2026-01-11 04:40:24] 2026-01-11 09:40:24,437 [wrapper] ==== wrapper stdout END ====
[2026-01-11 04:40:24] 2026-01-11 09:40:24,440 [wrapper] ==== wrapper stderr END ====
[2026-01-11 04:40:24]  *** Error codes and diagnostics ***
[2026-01-11 04:40:24]     "exeErrorCode": 0,
[2026-01-11 04:40:24]     "exeErrorDiag": "",
[2026-01-11 04:40:24]     "pilotErrorCode": 0,
[2026-01-11 04:40:24]     "pilotErrorDiag": "",
[2026-01-11 04:40:24]  *** Listing of results directory ***
[2026-01-11 04:40:24] total 1172144
[2026-01-11 04:40:24] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-11 04:40:24] -rwx------. 1 boincer umatlas     36322 Jan 10 22:33 runpilot2-wrapper.sh
[2026-01-11 04:40:24] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 22:33 queuedata.json
[2026-01-11 04:40:24] -rw-r--r--. 1 boincer umatlas       100 Jan 10 22:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 04:40:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 22:37 run_atlas
[2026-01-11 04:40:24] -rw-r--r--. 1 boincer umatlas       105 Jan 10 22:37 job.xml
[2026-01-11 04:40:24] -rw-r--r--. 2 boincer umatlas 930022336 Jan 10 22:37 EVNT.48039248._000024.pool.root.1
[2026-01-11 04:40:24] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:37 start_atlas.sh
[2026-01-11 04:40:24] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 22:37 shared
[2026-01-11 04:40:24] -rw-r--r--. 2 boincer umatlas    592414 Jan 10 22:37 input.tar.gz
[2026-01-11 04:40:24] -rw-r--r--. 1 boincer umatlas         0 Jan 10 22:37 boinc_lockfile
[2026-01-11 04:40:24] -rw-r--r--. 1 boincer umatlas      2591 Jan 10 22:37 pandaJob.out
[2026-01-11 04:40:24] -rw-------. 1 boincer umatlas        57 Jan 10 22:37 setup.sh.local
[2026-01-11 04:40:24] -rw-------. 1 boincer umatlas    989548 Jan 10 22:37 agis_schedconf.cvmfs.json
[2026-01-11 04:40:24] drwx------. 5 boincer umatlas      4096 Jan 10 22:37 pilot3
[2026-01-11 04:40:24] -rw-r--r--. 1 boincer umatlas      6840 Jan 11 04:37 init_data.xml
[2026-01-11 04:40:24] -rw-------. 1 boincer umatlas 260162797 Jan 11 04:37 HITS.48039250._006913.pool.root.1
[2026-01-11 04:40:24] -rw-r--r--. 1 boincer umatlas       532 Jan 11 04:38 boinc_task_state.xml
[2026-01-11 04:40:24] -rw-------. 1 boincer umatlas      1042 Jan 11 04:39 memory_monitor_summary.json
[2026-01-11 04:40:24] -rw-------. 1 boincer umatlas   1516240 Jan 11 04:39 agis_ddmendpoints.agis.ALL.json
[2026-01-11 04:40:24] -rw-------. 1 boincer umatlas    576311 Jan 11 04:39 log.48039250._006913.job.log.tgz.1
[2026-01-11 04:40:24] -rw-------. 1 boincer umatlas      7815 Jan 11 04:39 heartbeat.json
[2026-01-11 04:40:24] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 04:39 boinc_mmap_file
[2026-01-11 04:40:24] -rw-r--r--. 1 boincer umatlas        28 Jan 11 04:39 wrapper_checkpoint.txt
[2026-01-11 04:40:24] -rw-------. 1 boincer umatlas        95 Jan 11 04:40 pilot_heartbeat.json
[2026-01-11 04:40:24] -rw-------. 1 boincer umatlas      5011 Jan 11 04:40 pilotlog.txt
[2026-01-11 04:40:24] -rw-------. 1 boincer umatlas   2510420 Jan 11 04:40 log.48039250._006913.job.log.1
[2026-01-11 04:40:24] -rw-------. 1 boincer umatlas       357 Jan 11 04:40 output.list
[2026-01-11 04:40:24] -rw-r--r--. 1 boincer umatlas       620 Jan 11 04:40 runtime_log
[2026-01-11 04:40:24] -rw-------. 1 boincer umatlas   3102720 Jan 11 04:40 result.tar.gz
[2026-01-11 04:40:24] -rw-r--r--. 1 boincer umatlas      9328 Jan 11 04:40 runtime_log.err
[2026-01-11 04:40:24] -rw-------. 1 boincer umatlas       655 Jan 11 04:40 e4pLDmMO1y8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhghKDm0NIWDo.diag
[2026-01-11 04:40:24] -rw-r--r--. 1 boincer umatlas     21292 Jan 11 04:40 stderr.txt
[2026-01-11 04:40:24] HITS file was successfully produced:
[2026-01-11 04:40:24] -rw-------. 1 boincer umatlas 260162797 Jan 11 04:37 shared/HITS.pool.root.1
[2026-01-11 04:40:24]  *** Contents of shared directory: ***
[2026-01-11 04:40:24] total 1165932
[2026-01-11 04:40:24] -rw-r--r--. 2 boincer umatlas 930022336 Jan 10 22:37 ATLAS.root_0
[2026-01-11 04:40:24] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:37 start_atlas.sh
[2026-01-11 04:40:24] -rw-r--r--. 2 boincer umatlas    592414 Jan 10 22:37 input.tar.gz
[2026-01-11 04:40:24] -rw-------. 1 boincer umatlas 260162797 Jan 11 04:37 HITS.pool.root.1
[2026-01-11 04:40:24] -rw-------. 1 boincer umatlas   3102720 Jan 11 04:40 result.tar.gz
04:40:26 (3952241): run_atlas exited; CPU time 59058.753728
04:40:26 (3952241): called boinc_finish(0)

</stderr_txt>
]]>

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