Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:37:27 (16995): wrapper (7.7.26015): starting
22:37:27 (16995): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 22:37:27] Arguments: --nthreads 8
[2026-01-10 22:37:27] Threads: 8
[2026-01-10 22:37:27] Checking for CVMFS
[2026-01-10 22:37:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 22:37:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 22:37:27] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 22:37:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 22:37:27] 2.11.2.0 4329 32052 168012 155002 0 1 6462814 18432000 1 130560 0 8785601 99.809 2074003 23249 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 22:37:27] CVMFS is ok
[2026-01-10 22:37:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 22:37:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 22:37:27] Further information can be found at the LHC@home message board.
[2026-01-10 22:37:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 22:37:27] Checking for apptainer binary...
[2026-01-10 22:37:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 22:37:27] Running /usr/bin/apptainer --version
[2026-01-10 22:37:27] apptainer version 1.3.2-1.el7
[2026-01-10 22:37:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 22:37:29] c-206-17.aglt2.org
[2026-01-10 22:37:29] apptainer works
[2026-01-10 22:37:29] Set ATHENA_PROC_NUMBER=8
[2026-01-10 22:37:29] Set ATHENA_CORE_NUMBER=8
[2026-01-10 22:37:29] Starting ATLAS job with PandaID=6965940965
[2026-01-10 22:37:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 23:53:55]  *** The last 200 lines of the pilot log: ***
[2026-01-10 23:53:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 23:53:55]  replicas=None
[2026-01-10 23:53:55]  scope=mc16_13TeV
[2026-01-10 23:53:55]  status=None
[2026-01-10 23:53:55]  status_code=0
[2026-01-10 23:53:55]  storage_token=
[2026-01-10 23:53:55]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6965940965/log.47962010._002945.job.log.tgz.1
[2026-01-10 23:53:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/f6/b1/log.47962010._002945.job.log.tgz.1
[2026-01-10 23:53:55]  workdir=None
[2026-01-10 23:53:55] ]
[2026-01-10 23:53:55] 2026-01-11 04:52:43,949 | INFO     | transferring file log.47962010._002945.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6965940965/log.47962010._002945.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 23:53:55] 2026-01-11 04:52:43,949 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6965940965/log.47962010._002945.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._002945.job
[2026-01-10 23:53:55] 2026-01-11 04:52:43,967 | INFO     | adding to output.list: log.47962010._002945.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/f6/b1/log.47962010._002945.job.log.tgz.
[2026-01-10 23:53:55] 2026-01-11 04:52:43,968 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 23:53:55] 2026-01-11 04:52:43,968 | INFO     | summary of transferred files:
[2026-01-10 23:53:55] 2026-01-11 04:52:43,968 | INFO     |  -- lfn=log.47962010._002945.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 23:53:55] 2026-01-11 04:52:43,969 | INFO     | stage-out finished correctly
[2026-01-10 23:53:55] 2026-01-11 04:52:44,446 | INFO     | time since job start (4501s) is within the limit (349056.0s)
[2026-01-10 23:53:55] 2026-01-11 04:52:44,599 | WARNING  | process 1619 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 23:53:55] 2026-01-11 04:52:44,600 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965940965/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 23:53:55] 2026-01-11 04:52:44,764 | INFO     | number of running child processes to parent process 1619: 1
[2026-01-10 23:53:55] 2026-01-11 04:52:44,764 | INFO     | maximum number of monitored processes: 16
[2026-01-10 23:53:55] 2026-01-11 04:52:46,450 | INFO     | time since job start (4503s) is within the limit (349056.0s)
[2026-01-10 23:53:55] 2026-01-11 04:52:47,119 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 23:53:55] 2026-01-11 04:52:47,218 | INFO     | job 6965940965 has state=finished
[2026-01-10 23:53:55] 2026-01-11 04:52:47,218 | INFO     | preparing for final server update for job 6965940965 in state='finished'
[2026-01-10 23:53:55] 2026-01-11 04:52:47,218 | INFO     | this job has now completed (state=finished)
[2026-01-10 23:53:55] 2026-01-11 04:52:47,219 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 23:53:55] 2026-01-11 04:52:47,219 | INFO     | log transfer has been attempted: DONE
[2026-01-10 23:53:55] 2026-01-11 04:52:47,219 | INFO     | job 6965940965 has finished - writing final server update
[2026-01-10 23:53:55] 2026-01-11 04:52:47,219 | INFO     | total number of processed events: 50 (read)
[2026-01-10 23:53:55] 2026-01-11 04:52:47,220 | INFO     | executing command: lscpu
[2026-01-10 23:53:55] 2026-01-11 04:52:47,249 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 23:53:55] 2026-01-11 04:52:47,268 | INFO     | monitor loop #331: job 0:6965940965 is in state 'finished'
[2026-01-10 23:53:55] 2026-01-11 04:52:47,269 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 23:53:55] 2026-01-11 04:52:48,455 | INFO     | time since job start (4505s) is within the limit (349056.0s)
[2026-01-10 23:53:55] 2026-01-11 04:52:49,772 | INFO     | monitor loop #332: job 0:6965940965 is in state 'finished'
[2026-01-10 23:53:55] 2026-01-11 04:52:49,772 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 23:53:55] 2026-01-11 04:52:50,460 | INFO     | time since job start (4507s) is within the limit (349056.0s)
[2026-01-10 23:53:55] 2026-01-11 04:52:50,981 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 23:53:55] 2026-01-11 04:52:50,984 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2500.0833333333335
[2026-01-10 23:53:55] 2026-01-11 04:52:50,987 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965940965/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 23:53:55] 2026-01-11 04:52:50,988 | INFO     | extracted standard info from prmon json
[2026-01-10 23:53:55] 2026-01-11 04:52:50,988 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 23:53:55] 2026-01-11 04:52:50,988 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 23:53:55] 2026-01-11 04:52:50,989 | INFO     | fitting pss+swap vs Time
[2026-01-10 23:53:55] 2026-01-11 04:52:50,990 | INFO     | sum of square deviations: 93234853.61194034
[2026-01-10 23:53:55] 2026-01-11 04:52:50,990 | INFO     | sum of deviations: -8040391108.820895
[2026-01-10 23:53:55] 2026-01-11 04:52:50,990 | INFO     | mean x: 1768105015.716418
[2026-01-10 23:53:55] 2026-01-11 04:52:50,990 | INFO     | mean y: 2958605.7462686566
[2026-01-10 23:53:55] 2026-01-11 04:52:50,990 | INFO     | intersect: 152480871071.81226
[2026-01-10 23:53:55] 2026-01-11 04:52:50,991 | INFO     | chi2: 0.6352319624666206
[2026-01-10 23:53:55] 2026-01-11 04:52:50,991 | INFO     | current memory leak: -86.24 B/s (using 67 data points, chi2=0.64)
[2026-01-10 23:53:55] 2026-01-11 04:52:50,991 | INFO     | could have reported an average CPU frequency of 2178 MHz (6 samples)
[2026-01-10 23:53:55] 2026-01-11 04:52:50,991 | INFO     | ..............................
[2026-01-10 23:53:55] 2026-01-11 04:52:50,991 | INFO     | . Timing measurements:
[2026-01-10 23:53:55] 2026-01-11 04:52:50,991 | INFO     | . get job = 0 s
[2026-01-10 23:53:55] 2026-01-11 04:52:50,991 | INFO     | . initial setup = 2 s
[2026-01-10 23:53:55] 2026-01-11 04:52:50,991 | INFO     | . payload setup = 14 s
[2026-01-10 23:53:55] 2026-01-11 04:52:50,992 | INFO     | . stage-in = 0 s
[2026-01-10 23:53:55] 2026-01-11 04:52:50,992 | INFO     | . payload execution = 4466 s
[2026-01-10 23:53:55] 2026-01-11 04:52:50,992 | INFO     | . stage-out = 0 s
[2026-01-10 23:53:55] 2026-01-11 04:52:50,992 | INFO     | . log creation = 0 s
[2026-01-10 23:53:55] 2026-01-11 04:52:50,992 | INFO     | ..............................
[2026-01-10 23:53:55] 2026-01-11 04:52:51,068 | INFO     | 
[2026-01-10 23:53:55] 2026-01-11 04:52:51,068 | INFO     | job summary report
[2026-01-10 23:53:55] 2026-01-11 04:52:51,068 | INFO     | --------------------------------------------------
[2026-01-10 23:53:55] 2026-01-11 04:52:51,068 | INFO     | PanDA job id: 6965940965
[2026-01-10 23:53:55] 2026-01-11 04:52:51,068 | INFO     | task id: 47962010
[2026-01-10 23:53:55] 2026-01-11 04:52:51,069 | INFO     | errors: (none)
[2026-01-10 23:53:55] 2026-01-11 04:52:51,069 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 23:53:55] 2026-01-11 04:52:51,069 | INFO     | pilot state: finished 
[2026-01-10 23:53:55] 2026-01-11 04:52:51,069 | INFO     | transexitcode: 0
[2026-01-10 23:53:55] 2026-01-11 04:52:51,069 | INFO     | exeerrorcode: 0
[2026-01-10 23:53:55] 2026-01-11 04:52:51,069 | INFO     | exeerrordiag: 
[2026-01-10 23:53:55] 2026-01-11 04:52:51,069 | INFO     | exitcode: 0
[2026-01-10 23:53:55] 2026-01-11 04:52:51,069 | INFO     | exitmsg: OK
[2026-01-10 23:53:55] 2026-01-11 04:52:51,069 | INFO     | cpuconsumptiontime: 31322 s
[2026-01-10 23:53:55] 2026-01-11 04:52:51,069 | INFO     | nevents: 50
[2026-01-10 23:53:55] 2026-01-11 04:52:51,070 | INFO     | neventsw: 0
[2026-01-10 23:53:55] 2026-01-11 04:52:51,070 | INFO     | pid: 1619
[2026-01-10 23:53:55] 2026-01-11 04:52:51,070 | INFO     | pgrp: 1619
[2026-01-10 23:53:55] 2026-01-11 04:52:51,070 | INFO     | corecount: 8
[2026-01-10 23:53:55] 2026-01-11 04:52:51,070 | INFO     | event service: False
[2026-01-10 23:53:55] 2026-01-11 04:52:51,070 | INFO     | sizes: {0: 2284568, 4: 2284830, 11: 2284858, 4485: 2311761, 4486: 2320755, 4489: 2320811, 4493: 2321185}
[2026-01-10 23:53:55] 2026-01-11 04:52:51,070 | INFO     | --------------------------------------------------
[2026-01-10 23:53:55] 2026-01-11 04:52:51,070 | INFO     | 
[2026-01-10 23:53:55] 2026-01-11 04:52:51,070 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 23:53:55] 2026-01-11 04:52:51,087 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 23:53:55] 2026-01-11 04:52:51,087 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 23:53:55] 2026-01-11 04:52:51,087 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 23:53:55] 2026-01-11 04:52:51,087 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 23:53:55] 2026-01-11 04:52:51,087 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 23:53:55] 2026-01-11 04:52:51,088 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 23:53:55] 2026-01-11 04:52:51,088 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 23:53:55] 2026-01-11 04:52:51,088 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 23:53:55] 2026-01-11 04:52:51,088 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 23:53:55] 2026-01-11 04:52:51,088 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 23:53:55] 2026-01-11 04:52:51,088 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 23:53:55] 2026-01-11 04:52:51,088 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 23:53:55] 2026-01-11 04:52:51,088 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 23:53:55] 2026-01-11 04:52:51,088 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 23:53:55] 2026-01-11 04:52:51,089 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 23:53:55] 2026-01-11 04:52:51,089 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 23:53:55] 2026-01-11 04:52:51,089 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 23:53:55] 2026-01-11 04:52:51,089 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 23:53:55] 2026-01-11 04:52:51,089 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 23:53:55] 2026-01-11 04:52:51,089 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 23:53:55] 2026-01-11 04:52:51,089 | INFO     | job 6965940965 has completed (purged errors)
[2026-01-10 23:53:55] 2026-01-11 04:52:51,089 | INFO     | overall cleanup function is called
[2026-01-10 23:53:55] 2026-01-11 04:52:52,101 | INFO     | --- collectZombieJob: --- 10, [1619]
[2026-01-10 23:53:55] 2026-01-11 04:52:52,101 | INFO     | zombie collector waiting for pid 1619
[2026-01-10 23:53:55] 2026-01-11 04:52:52,101 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 23:53:55] 2026-01-11 04:52:52,102 | INFO     | collected zombie processes
[2026-01-10 23:53:55] 2026-01-11 04:52:52,102 | INFO     | will attempt to kill all subprocesses of pid=1619
[2026-01-10 23:53:55] 2026-01-11 04:52:52,265 | INFO     | process IDs to be killed: [1619] (in reverse order)
[2026-01-10 23:53:55] 2026-01-11 04:52:52,330 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 23:53:55] 2026-01-11 04:52:52,331 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 23:53:55] 2026-01-11 04:52:52,336 | INFO     | did not find any defunct processes belonging to 1619
[2026-01-10 23:53:55] 2026-01-11 04:52:52,340 | INFO     | did not find any defunct processes belonging to 1619
[2026-01-10 23:53:55] 2026-01-11 04:52:52,340 | INFO     | ready for new job
[2026-01-10 23:53:55] 2026-01-11 04:52:52,341 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 23:53:55] 2026-01-11 04:52:52,342 | INFO     | ***************************************
[2026-01-10 23:53:55] 2026-01-11 04:52:52,342 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 23:53:55] 2026-01-11 04:52:52,342 | INFO     | ***************************************
[2026-01-10 23:53:55] 2026-01-11 04:52:52,343 | INFO     | 
[2026-01-10 23:53:55] 2026-01-11 04:52:52,344 | INFO     | architecture information:
[2026-01-10 23:53:55] 2026-01-11 04:52:52,344 | INFO     | executing command: cat /etc/os-release
[2026-01-10 23:53:55] 2026-01-11 04:52:52,360 | INFO     | cat /etc/os-release:
[2026-01-10 23:53:55] NAME="CentOS Linux"
[2026-01-10 23:53:55] VERSION="7 (Core)"
[2026-01-10 23:53:55] ID="centos"
[2026-01-10 23:53:55] ID_LIKE="rhel fedora"
[2026-01-10 23:53:55] VERSION_ID="7"
[2026-01-10 23:53:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 23:53:55] ANSI_COLOR="0;31"
[2026-01-10 23:53:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 23:53:55] HOME_URL="https://www.centos.org/"
[2026-01-10 23:53:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 23:53:55] 
[2026-01-10 23:53:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 23:53:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 23:53:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 23:53:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 23:53:55] 
[2026-01-10 23:53:55] 2026-01-11 04:52:52,361 | INFO     | ***************************************
[2026-01-10 23:53:55] 2026-01-11 04:52:52,863 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 23:53:55] 2026-01-11 04:52:52,880 | INFO     | sufficient remaining disk space (25189941248 B)
[2026-01-10 23:53:55] 2026-01-11 04:52:52,880 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 23:53:55] 2026-01-11 04:52:52,880 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 23:53:55] 2026-01-11 04:52:52,880 | INFO     | update_server=False
[2026-01-10 23:53:55] 2026-01-11 04:52:52,881 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 23:53:55] 2026-01-11 04:52:52,881 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 23:53:55] 2026-01-11 04:52:52,881 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 23:53:55] 2026-01-11 04:52:53,225 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 23:53:55] 2026-01-11 04:52:53,275 | INFO     | all data control threads have been joined
[2026-01-10 23:53:55] 2026-01-11 04:52:53,281 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 23:53:55] 2026-01-11 04:52:53,281 | INFO     | aborting loop
[2026-01-10 23:53:55] 2026-01-11 04:52:53,886 | INFO     | [job] retrieve thread has finished
[2026-01-10 23:53:55] 2026-01-11 04:52:53,887 | INFO     | [job] queue monitor thread has finished
[2026-01-10 23:53:55] 2026-01-11 04:52:53,926 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 23:53:55] 2026-01-11 04:52:54,004 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 23:53:55] 2026-01-11 04:52:54,020 | INFO     | all payload control threads have been joined
[2026-01-10 23:53:55] 2026-01-11 04:52:54,280 | INFO     | [data] control thread has finished
[2026-01-10 23:53:55] 2026-01-11 04:52:54,286 | INFO     | [job] job monitor thread has finished
[2026-01-10 23:53:55] 2026-01-11 04:52:54,331 | INFO     | all job control threads have been joined
[2026-01-10 23:53:55] 2026-01-11 04:52:54,520 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 23:53:55] 2026-01-11 04:52:54,863 | INFO     | [job] validate thread has finished
[2026-01-10 23:53:55] 2026-01-11 04:52:54,866 | INFO     | [data] copytool_in thread has finished
[2026-01-10 23:53:55] 2026-01-11 04:52:54,883 | INFO     | [data] copytool_out thread has finished
[2026-01-10 23:53:55] 2026-01-11 04:52:55,025 | INFO     | [payload] control thread has finished
[2026-01-10 23:53:55] 2026-01-11 04:52:55,316 | INFO     | [payload] validate_post thread has finished
[2026-01-10 23:53:55] 2026-01-11 04:52:55,336 | INFO     | [job] control thread has finished
[2026-01-10 23:53:55] 2026-01-11 04:52:55,485 | INFO     | [payload] failed_post thread has finished
[2026-01-10 23:53:55] 2026-01-11 04:52:57,232 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 23:53:55] 2026-01-11 04:53:03,619 | INFO     | job.realtimelogging is not enabled
[2026-01-10 23:53:55] 2026-01-11 04:53:04,624 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 23:53:55] 2026-01-11 04:53:23,684 | INFO     | PID=21060 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 23:53:55] 2026-01-11 04:53:23,684 | INFO     | .. there are 3 such processes running
[2026-01-10 23:53:55] 2026-01-11 04:53:23,685 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 23:53:55] 2026-01-11 04:53:23,685 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 23:53:55] 2026-01-11 04:53:23,685 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 23:53:55] 2026-01-11 04:53:49,855 | INFO     | [monitor] cgroup control has ended
[2026-01-10 23:53:55] 2026-01-11 04:53:50,541 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139783390320448)>', '<ExcThread(monitor, started 139782571149056)>']
[2026-01-10 23:53:55] 2026-01-11 04:53:50,823 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 23:53:55] 2026-01-11 04:53:50,823 | INFO     | [monitor] control thread has ended
[2026-01-10 23:53:55] 2026-01-11 04:53:55,564 | INFO     | all workflow threads have been joined
[2026-01-10 23:53:55] 2026-01-11 04:53:55,564 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 23:53:55] 2026-01-11 04:53:55,564 | INFO     | traces error code: 0
[2026-01-10 23:53:55] 2026-01-11 04:53:55,565 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 23:53:55] 2026-01-11 04:53:55,682 [wrapper] ==== pilot stdout END ====
[2026-01-10 23:53:55] 2026-01-11 04:53:55,685 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 23:53:55] 2026-01-11 04:53:55,687 [wrapper] pilotpid: 21060
[2026-01-10 23:53:55] 2026-01-11 04:53:55,689 [wrapper] Pilot exit status: 0
[2026-01-10 23:53:55] 2026-01-11 04:53:55,698 [wrapper] pandaids: 6965940965
[2026-01-10 23:53:55] 2026-01-11 04:53:55,737 [wrapper] cleanup supervisor_pilot  1338 21061
[2026-01-10 23:53:55] 2026-01-11 04:53:55,739 [wrapper] Test setup, not cleaning
[2026-01-10 23:53:55] 2026-01-11 04:53:55,742 [wrapper] apfmon messages muted
[2026-01-10 23:53:55] 2026-01-11 04:53:55,744 [wrapper] ==== wrapper stdout END ====
[2026-01-10 23:53:55] 2026-01-11 04:53:55,747 [wrapper] ==== wrapper stderr END ====
[2026-01-10 23:53:55]  *** Error codes and diagnostics ***
[2026-01-10 23:53:55]     "exeErrorCode": 0,
[2026-01-10 23:53:55]     "exeErrorDiag": "",
[2026-01-10 23:53:55]     "pilotErrorCode": 0,
[2026-01-10 23:53:55]     "pilotErrorDiag": "",
[2026-01-10 23:53:55]  *** Listing of results directory ***
[2026-01-10 23:53:55] total 437968
[2026-01-10 23:53:55] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-10 23:53:55] -rwx------ 1 boincer umatlas     36322 Jan 10 22:33 runpilot2-wrapper.sh
[2026-01-10 23:53:55] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 22:33 queuedata.json
[2026-01-10 23:53:55] -rw-r--r-- 1 boincer umatlas       100 Jan 10 22:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 23:53:55] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 22:37 run_atlas
[2026-01-10 23:53:55] -rw-r--r-- 1 boincer umatlas       105 Jan 10 22:37 job.xml
[2026-01-10 23:53:55] -rw-r--r-- 2 boincer umatlas 395458336 Jan 10 22:37 EVNT.47962006._000056.pool.root.1
[2026-01-10 23:53:55] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 22:37 start_atlas.sh
[2026-01-10 23:53:55] drwxrwx--x 2 boincer umatlas      4096 Jan 10 22:37 shared
[2026-01-10 23:53:55] -rw-r--r-- 2 boincer umatlas    592608 Jan 10 22:37 input.tar.gz
[2026-01-10 23:53:55] -rw-r--r-- 1 boincer umatlas         0 Jan 10 22:37 boinc_lockfile
[2026-01-10 23:53:55] -rw-r--r-- 1 boincer umatlas      2889 Jan 10 22:37 pandaJob.out
[2026-01-10 23:53:55] -rw------- 1 boincer umatlas        57 Jan 10 22:37 setup.sh.local
[2026-01-10 23:53:55] -rw------- 1 boincer umatlas    989548 Jan 10 22:37 agis_schedconf.cvmfs.json
[2026-01-10 23:53:55] -rw------- 1 boincer umatlas   1516240 Jan 10 22:37 agis_ddmendpoints.agis.ALL.json
[2026-01-10 23:53:55] drwx------ 5 boincer umatlas      4096 Jan 10 22:37 pilot3
[2026-01-10 23:53:55] -rw-r--r-- 1 boincer umatlas       529 Jan 10 23:43 boinc_task_state.xml
[2026-01-10 23:53:55] -rw-r--r-- 1 boincer umatlas      5951 Jan 10 23:45 init_data.xml
[2026-01-10 23:53:55] -rw------- 1 boincer umatlas  45348789 Jan 10 23:52 HITS.47962010._002945.pool.root.1
[2026-01-10 23:53:55] -rw------- 1 boincer umatlas      1051 Jan 10 23:52 memory_monitor_summary.json
[2026-01-10 23:53:55] -rw------- 1 boincer umatlas   1204826 Jan 10 23:52 log.47962010._002945.job.log.tgz.1
[2026-01-10 23:53:55] -rw------- 1 boincer umatlas      8622 Jan 10 23:52 heartbeat.json
[2026-01-10 23:53:55] -rw------- 1 boincer umatlas        95 Jan 10 23:53 pilot_heartbeat.json
[2026-01-10 23:53:55] -rw-r--r-- 1 boincer umatlas        27 Jan 10 23:53 wrapper_checkpoint.txt
[2026-01-10 23:53:55] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 23:53 boinc_mmap_file
[2026-01-10 23:53:55] -rw------- 1 boincer umatlas      4893 Jan 10 23:53 pilotlog.txt
[2026-01-10 23:53:55] -rw------- 1 boincer umatlas    671795 Jan 10 23:53 log.47962010._002945.job.log.1
[2026-01-10 23:53:55] -rw------- 1 boincer umatlas       353 Jan 10 23:53 output.list
[2026-01-10 23:53:55] -rw-r--r-- 1 boincer umatlas       620 Jan 10 23:53 runtime_log
[2026-01-10 23:53:55] -rw------- 1 boincer umatlas   1894400 Jan 10 23:53 result.tar.gz
[2026-01-10 23:53:55] -rw-r--r-- 1 boincer umatlas      9342 Jan 10 23:53 runtime_log.err
[2026-01-10 23:53:55] -rw------- 1 boincer umatlas       659 Jan 10 23:53 ceaKDmMO1y8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5fhKDm4Twwbn.diag
[2026-01-10 23:53:55] -rw-r--r-- 1 boincer umatlas     21931 Jan 10 23:53 stderr.txt
[2026-01-10 23:53:55] HITS file was successfully produced:
[2026-01-10 23:53:55] -rw------- 1 boincer umatlas 45348789 Jan 10 23:52 shared/HITS.pool.root.1
[2026-01-10 23:53:55]  *** Contents of shared directory: ***
[2026-01-10 23:53:55] total 432928
[2026-01-10 23:53:55] -rw-r--r-- 2 boincer umatlas 395458336 Jan 10 22:37 ATLAS.root_0
[2026-01-10 23:53:55] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 22:37 start_atlas.sh
[2026-01-10 23:53:55] -rw-r--r-- 2 boincer umatlas    592608 Jan 10 22:37 input.tar.gz
[2026-01-10 23:53:55] -rw------- 1 boincer umatlas  45348789 Jan 10 23:52 HITS.pool.root.1
[2026-01-10 23:53:55] -rw------- 1 boincer umatlas   1894400 Jan 10 23:53 result.tar.gz
23:53:56 (16995): run_atlas exited; CPU time 31295.240772
23:53:56 (16995): called boinc_finish(0)

</stderr_txt>
]]>

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