Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:37:28 (3955021): wrapper (7.7.26015): starting
22:37:28 (3955021): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 22:37:28] Arguments: --nthreads 8
[2026-01-10 22:37:28] Threads: 8
[2026-01-10 22:37:28] Checking for CVMFS
[2026-01-10 22:37:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 22:37:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 22:37:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 22:37:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 22:37:30] 2.13.3.0 15513 95707 714680 155002 1 226 31334068 40960001 34070 16776704 0 826221378 99.831 356915418 31455 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 22:37:30] CVMFS is ok
[2026-01-10 22:37:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 22:37:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 22:37:30] Further information can be found at the LHC@home message board.
[2026-01-10 22:37:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 22:37:30] Checking for apptainer binary...
[2026-01-10 22:37:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 22:37:30] Running /usr/bin/apptainer --version
[2026-01-10 22:37:30] apptainer version 1.4.5-2.el9
[2026-01-10 22:37:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 22:37:31] c-1-1.aglt2.org
[2026-01-10 22:37:31] apptainer works
[2026-01-10 22:37:31] Set ATHENA_PROC_NUMBER=8
[2026-01-10 22:37:31] Set ATHENA_CORE_NUMBER=8
[2026-01-10 22:37:31] Starting ATLAS job with PandaID=6965941360
[2026-01-10 22:37:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 04:42:42]  *** The last 200 lines of the pilot log: ***
[2026-01-11 04:42:42] 2026-01-11 09:41:55,759 | INFO     | time since job start (21839s) is within the limit (349056.0s)
[2026-01-11 04:42:42] 2026-01-11 09:41:55,928 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 04:42:42] 2026-01-11 09:41:55,940 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2905.2944
[2026-01-11 04:42:42] 2026-01-11 09:41:55,955 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965941360/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 04:42:42] 2026-01-11 09:41:55,956 | INFO     | extracted standard info from prmon json
[2026-01-11 04:42:42] 2026-01-11 09:41:55,956 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 04:42:42] 2026-01-11 09:41:55,956 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 04:42:42] 2026-01-11 09:41:55,956 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 04:42:42] 2026-01-11 09:41:55,956 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 04:42:42] 2026-01-11 09:41:55,962 | INFO     | fitting pss+swap vs Time
[2026-01-11 04:42:42] 2026-01-11 09:41:55,963 | INFO     | sum of square deviations: 14108369586.644253
[2026-01-11 04:42:42] 2026-01-11 09:41:55,966 | INFO     | sum of deviations: 36780416986.68906
[2026-01-11 04:42:42] 2026-01-11 09:41:55,966 | INFO     | mean x: 1768113603.2717087
[2026-01-11 04:42:42] 2026-01-11 09:41:55,966 | INFO     | mean y: 2559817.3949579834
[2026-01-11 04:42:42] 2026-01-11 09:41:55,966 | INFO     | intersect: -4606899497.431437
[2026-01-11 04:42:42] 2026-01-11 09:41:55,967 | INFO     | chi2: 2.2595213557823173
[2026-01-11 04:42:42] 2026-01-11 09:41:55,968 | INFO     | sum of square deviations: 13523867281.269854
[2026-01-11 04:42:42] 2026-01-11 09:41:55,971 | INFO     | sum of deviations: 58412611740.77851
[2026-01-11 04:42:42] 2026-01-11 09:41:55,971 | INFO     | mean x: 1768113450.7755682
[2026-01-11 04:42:42] 2026-01-11 09:41:55,971 | INFO     | mean y: 2565393.8579545454
[2026-01-11 04:42:42] 2026-01-11 09:41:55,971 | INFO     | intersect: -7634312606.03496
[2026-01-11 04:42:42] 2026-01-11 09:41:55,971 | INFO     | chi2: 1.582773551383885
[2026-01-11 04:42:42] 2026-01-11 09:41:55,972 | INFO     | current chi2=1.582773551383885 (change=29.950936408127948 %)
[2026-01-11 04:42:42] 2026-01-11 09:41:55,972 | INFO     | sum of square deviations: 12955715659.440937
[2026-01-11 04:42:42] 2026-01-11 09:41:55,975 | INFO     | sum of deviations: 57223611098.32562
[2026-01-11 04:42:42] 2026-01-11 09:41:55,975 | INFO     | mean x: 1768113298.276657
[2026-01-11 04:42:42] 2026-01-11 09:41:55,975 | INFO     | mean y: 2565074.694524496
[2026-01-11 04:42:42] 2026-01-11 09:41:55,975 | INFO     | intersect: -7806947762.570635
[2026-01-11 04:42:42] 2026-01-11 09:41:55,976 | INFO     | chi2: 1.5831521459715654
[2026-01-11 04:42:42] 2026-01-11 09:41:55,976 | INFO     | current chi2=1.5831521459715654 (change=-0.023919693840561914 %)
[2026-01-11 04:42:42] 2026-01-11 09:41:55,976 | INFO     | right removable region: 346
[2026-01-11 04:42:42] 2026-01-11 09:41:55,976 | INFO     | sum of square deviations: 13523808111.269855
[2026-01-11 04:42:42] 2026-01-11 09:41:55,979 | INFO     | sum of deviations: -24418957097.47729
[2026-01-11 04:42:42] 2026-01-11 09:41:55,979 | INFO     | mean x: 1768113755.7755682
[2026-01-11 04:42:42] 2026-01-11 09:41:55,979 | INFO     | mean y: 2575695.3863636362
[2026-01-11 04:42:42] 2026-01-11 09:41:55,979 | INFO     | intersect: 3195130158.6342864
[2026-01-11 04:42:42] 2026-01-11 09:41:55,980 | INFO     | chi2: 0.7474612144627322
[2026-01-11 04:42:42] 2026-01-11 09:41:55,980 | INFO     | current chi2=0.7474612144627322 (change=66.91948883112293 %)
[2026-01-11 04:42:42] 2026-01-11 09:41:55,980 | INFO     | sum of square deviations: 12955640385.440937
[2026-01-11 04:42:42] 2026-01-11 09:41:55,983 | INFO     | sum of deviations: -30119116356.08357
[2026-01-11 04:42:42] 2026-01-11 09:41:55,983 | INFO     | mean x: 1768113908.276657
[2026-01-11 04:42:42] 2026-01-11 09:41:55,984 | INFO     | mean y: 2577209.9279538905
[2026-01-11 04:42:42] 2026-01-11 09:41:55,984 | INFO     | intersect: 4113067077.6491346
[2026-01-11 04:42:42] 2026-01-11 09:41:55,984 | INFO     | chi2: 0.7201727360216149
[2026-01-11 04:42:42] 2026-01-11 09:41:55,984 | INFO     | current chi2=0.7201727360216149 (change=3.6508219975978218 %)
[2026-01-11 04:42:42] 2026-01-11 09:41:55,984 | INFO     | left removable region: 20
[2026-01-11 04:42:42] 2026-01-11 09:41:55,985 | INFO     | sum of square deviations: 10743017177.20248
[2026-01-11 04:42:42] 2026-01-11 09:41:55,987 | INFO     | sum of deviations: -2179800366.3680778
[2026-01-11 04:42:42] 2026-01-11 09:41:55,988 | INFO     | mean x: 1768113877.7730062
[2026-01-11 04:42:42] 2026-01-11 09:41:55,988 | INFO     | mean y: 2581246.5490797544
[2026-01-11 04:42:42] 2026-01-11 09:41:55,988 | INFO     | intersect: 361338494.6272879
[2026-01-11 04:42:42] 2026-01-11 09:41:55,990 | INFO     | chi2: 0.0274358714518601
[2026-01-11 04:42:42] 2026-01-11 09:41:55,990 | INFO     | current memory leak: -0.20 B/s (using 326 data points, chi2=0.03)
[2026-01-11 04:42:42] 2026-01-11 09:41:55,990 | INFO     | could have reported an average CPU frequency of 2943 MHz (15 samples)
[2026-01-11 04:42:42] 2026-01-11 09:41:55,991 | INFO     | ..............................
[2026-01-11 04:42:42] 2026-01-11 09:41:55,991 | INFO     | . Timing measurements:
[2026-01-11 04:42:42] 2026-01-11 09:41:55,991 | INFO     | . get job = 0 s
[2026-01-11 04:42:42] 2026-01-11 09:41:55,991 | INFO     | . initial setup = 2 s
[2026-01-11 04:42:42] 2026-01-11 09:41:55,991 | INFO     | . payload setup = 16 s
[2026-01-11 04:42:42] 2026-01-11 09:41:55,991 | INFO     | . stage-in = 0 s
[2026-01-11 04:42:42] 2026-01-11 09:41:55,991 | INFO     | . payload execution = 21760 s
[2026-01-11 04:42:42] 2026-01-11 09:41:55,991 | INFO     | . stage-out = 2 s
[2026-01-11 04:42:42] 2026-01-11 09:41:55,991 | INFO     | . log creation = 0 s
[2026-01-11 04:42:42] 2026-01-11 09:41:55,991 | INFO     | ..............................
[2026-01-11 04:42:42] 2026-01-11 09:41:56,082 | INFO     | 
[2026-01-11 04:42:42] 2026-01-11 09:41:56,083 | INFO     | job summary report
[2026-01-11 04:42:42] 2026-01-11 09:41:56,083 | INFO     | --------------------------------------------------
[2026-01-11 04:42:42] 2026-01-11 09:41:56,083 | INFO     | PanDA job id: 6965941360
[2026-01-11 04:42:42] 2026-01-11 09:41:56,083 | INFO     | task id: 48039250
[2026-01-11 04:42:42] 2026-01-11 09:41:56,083 | INFO     | errors: (none)
[2026-01-11 04:42:42] 2026-01-11 09:41:56,083 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 04:42:42] 2026-01-11 09:41:56,083 | INFO     | pilot state: finished 
[2026-01-11 04:42:42] 2026-01-11 09:41:56,083 | INFO     | transexitcode: 0
[2026-01-11 04:42:42] 2026-01-11 09:41:56,083 | INFO     | exeerrorcode: 0
[2026-01-11 04:42:42] 2026-01-11 09:41:56,083 | INFO     | exeerrordiag: 
[2026-01-11 04:42:42] 2026-01-11 09:41:56,083 | INFO     | exitcode: 0
[2026-01-11 04:42:42] 2026-01-11 09:41:56,083 | INFO     | exitmsg: OK
[2026-01-11 04:42:42] 2026-01-11 09:41:56,084 | INFO     | cpuconsumptiontime: 58188 s
[2026-01-11 04:42:42] 2026-01-11 09:41:56,084 | INFO     | nevents: 400
[2026-01-11 04:42:42] 2026-01-11 09:41:56,084 | INFO     | neventsw: 0
[2026-01-11 04:42:42] 2026-01-11 09:41:56,084 | INFO     | pid: 3988381
[2026-01-11 04:42:42] 2026-01-11 09:41:56,084 | INFO     | pgrp: 3988381
[2026-01-11 04:42:42] 2026-01-11 09:41:56,084 | INFO     | corecount: 8
[2026-01-11 04:42:42] 2026-01-11 09:41:56,084 | INFO     | event service: False
[2026-01-11 04:42:42] 2026-01-11 09:41:56,084 | INFO     | sizes: {0: 2284023, 1: 2284023, 12: 2284051, 13: 2284341, 23: 2284397, 21781: 2318285, 21784: 2327339, 21803: 2327477}
[2026-01-11 04:42:42] 2026-01-11 09:41:56,084 | INFO     | --------------------------------------------------
[2026-01-11 04:42:42] 2026-01-11 09:41:56,084 | INFO     | 
[2026-01-11 04:42:42] 2026-01-11 09:41:56,084 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-11 04:42:42] 2026-01-11 09:41:56,123 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 04:42:42] 2026-01-11 09:41:56,124 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 04:42:42] 2026-01-11 09:41:56,124 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 04:42:42] 2026-01-11 09:41:56,124 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 04:42:42] 2026-01-11 09:41:56,124 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 04:42:42] 2026-01-11 09:41:56,124 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 04:42:42] 2026-01-11 09:41:56,124 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 04:42:42] 2026-01-11 09:41:56,124 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 04:42:42] 2026-01-11 09:41:56,124 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 04:42:42] 2026-01-11 09:41:56,124 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 04:42:42] 2026-01-11 09:41:56,124 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 04:42:42] 2026-01-11 09:41:56,124 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 04:42:42] 2026-01-11 09:41:56,124 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 04:42:42] 2026-01-11 09:41:56,125 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 04:42:42] 2026-01-11 09:41:56,125 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 04:42:42] 2026-01-11 09:41:56,125 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 04:42:42] 2026-01-11 09:41:56,125 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 04:42:42] 2026-01-11 09:41:56,125 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 04:42:42] 2026-01-11 09:41:56,125 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 04:42:42] 2026-01-11 09:41:56,125 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 04:42:42] 2026-01-11 09:41:56,125 | INFO     | job 6965941360 has completed (purged errors)
[2026-01-11 04:42:42] 2026-01-11 09:41:56,125 | INFO     | overall cleanup function is called
[2026-01-11 04:42:42] 2026-01-11 09:41:57,134 | INFO     | --- collectZombieJob: --- 10, [3988381]
[2026-01-11 04:42:42] 2026-01-11 09:41:57,134 | INFO     | zombie collector waiting for pid 3988381
[2026-01-11 04:42:42] 2026-01-11 09:41:57,134 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 04:42:42] 2026-01-11 09:41:57,134 | INFO     | collected zombie processes
[2026-01-11 04:42:42] 2026-01-11 09:41:57,134 | INFO     | will attempt to kill all subprocesses of pid=3988381
[2026-01-11 04:42:42] 2026-01-11 09:41:57,698 | INFO     | process IDs to be killed: [3988381] (in reverse order)
[2026-01-11 04:42:42] 2026-01-11 09:41:57,889 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 04:42:42] 2026-01-11 09:41:57,890 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 04:42:42] 2026-01-11 09:41:57,917 | INFO     | did not find any defunct processes belonging to 3988381
[2026-01-11 04:42:42] 2026-01-11 09:41:57,941 | INFO     | did not find any defunct processes belonging to 3988381
[2026-01-11 04:42:42] 2026-01-11 09:41:57,941 | INFO     | ready for new job
[2026-01-11 04:42:42] 2026-01-11 09:41:57,942 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 04:42:42] 2026-01-11 09:41:57,944 | INFO     | ***************************************
[2026-01-11 04:42:42] 2026-01-11 09:41:57,944 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 04:42:42] 2026-01-11 09:41:57,944 | INFO     | ***************************************
[2026-01-11 04:42:42] 2026-01-11 09:41:57,944 | INFO     | 
[2026-01-11 04:42:42] 2026-01-11 09:41:57,948 | INFO     | architecture information:
[2026-01-11 04:42:42] 2026-01-11 09:41:57,949 | INFO     | executing command: cat /etc/os-release
[2026-01-11 04:42:42] 2026-01-11 09:41:57,978 | INFO     | cat /etc/os-release:
[2026-01-11 04:42:42] NAME="CentOS Linux"
[2026-01-11 04:42:42] VERSION="7 (Core)"
[2026-01-11 04:42:42] ID="centos"
[2026-01-11 04:42:42] ID_LIKE="rhel fedora"
[2026-01-11 04:42:42] VERSION_ID="7"
[2026-01-11 04:42:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 04:42:42] ANSI_COLOR="0;31"
[2026-01-11 04:42:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 04:42:42] HOME_URL="https://www.centos.org/"
[2026-01-11 04:42:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 04:42:42] 
[2026-01-11 04:42:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 04:42:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 04:42:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 04:42:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 04:42:42] 
[2026-01-11 04:42:42] 2026-01-11 09:41:57,978 | INFO     | ***************************************
[2026-01-11 04:42:42] 2026-01-11 09:41:58,481 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-11 04:42:42] 2026-01-11 09:41:58,585 | INFO     | sufficient remaining disk space (106948460544 B)
[2026-01-11 04:42:42] 2026-01-11 09:41:58,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 04:42:42] 2026-01-11 09:41:58,585 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 04:42:42] 2026-01-11 09:41:58,585 | INFO     | update_server=False
[2026-01-11 04:42:42] 2026-01-11 09:41:58,585 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 04:42:42] 2026-01-11 09:41:58,586 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 04:42:42] 2026-01-11 09:41:58,590 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:42:42] 2026-01-11 09:41:58,590 | INFO     | aborting loop
[2026-01-11 04:42:42] 2026-01-11 09:41:58,890 | INFO     | all payload control threads have been joined
[2026-01-11 04:42:42] 2026-01-11 09:41:59,044 | INFO     | all job control threads have been joined
[2026-01-11 04:42:42] 2026-01-11 09:41:59,552 | INFO     | all data control threads have been joined
[2026-01-11 04:42:42] 2026-01-11 09:41:59,591 | INFO     | [job] retrieve thread has finished
[2026-01-11 04:42:42] 2026-01-11 09:41:59,596 | INFO     | [job] job monitor thread has finished
[2026-01-11 04:42:42] 2026-01-11 09:41:59,896 | INFO     | [payload] control thread has finished
[2026-01-11 04:42:42] 2026-01-11 09:42:00,050 | INFO     | [job] control thread has finished
[2026-01-11 04:42:42] 2026-01-11 09:42:00,215 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 04:42:42] 2026-01-11 09:42:00,238 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 04:42:42] 2026-01-11 09:42:00,240 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 04:42:42] 2026-01-11 09:42:00,516 | INFO     | [payload] validate_post thread has finished
[2026-01-11 04:42:42] 2026-01-11 09:42:00,558 | INFO     | [data] control thread has finished
[2026-01-11 04:42:42] 2026-01-11 09:42:00,593 | INFO     | [data] copytool_out thread has finished
[2026-01-11 04:42:42] 2026-01-11 09:42:00,838 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 04:42:42] 2026-01-11 09:42:01,000 | INFO     | [payload] failed_post thread has finished
[2026-01-11 04:42:42] 2026-01-11 09:42:01,021 | INFO     | [job] validate thread has finished
[2026-01-11 04:42:42] 2026-01-11 09:42:01,023 | INFO     | [data] copytool_in thread has finished
[2026-01-11 04:42:42] 2026-01-11 09:42:01,096 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:42:42] 2026-01-11 09:42:01,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 04:42:42] 2026-01-11 09:42:02,102 | INFO     | [job] queue monitor thread has finished
[2026-01-11 04:42:42] 2026-01-11 09:42:05,249 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 04:42:42] 2026-01-11 09:42:27,770 | INFO     | 21844s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-11 04:42:42] 2026-01-11 09:42:29,723 | INFO     | PID=3962536 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 04:42:42] 2026-01-11 09:42:29,724 | INFO     | .. there are 59 such processes running
[2026-01-11 04:42:42] 2026-01-11 09:42:29,725 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 04:42:42] 2026-01-11 09:42:29,725 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 04:42:42] 2026-01-11 09:42:29,725 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 04:42:42] 2026-01-11 09:42:34,622 | INFO     | [monitor] cgroup control has ended
[2026-01-11 04:42:42] 2026-01-11 09:42:36,541 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140456874161984)>', '<ExcThread(monitor, started 140456025384704)>']
[2026-01-11 04:42:42] 2026-01-11 09:42:36,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 04:42:42] 2026-01-11 09:42:36,767 | INFO     | [monitor] control thread has ended
[2026-01-11 04:42:42] 2026-01-11 09:42:41,567 | INFO     | all workflow threads have been joined
[2026-01-11 04:42:42] 2026-01-11 09:42:41,567 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 04:42:42] 2026-01-11 09:42:41,567 | INFO     | traces error code: 0
[2026-01-11 04:42:42] 2026-01-11 09:42:41,568 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 04:42:42] 2026-01-11 09:42:41,854 [wrapper] ==== pilot stdout END ====
[2026-01-11 04:42:42] 2026-01-11 09:42:41,867 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 04:42:42] 2026-01-11 09:42:41,891 [wrapper] pilotpid: 3962536
[2026-01-11 04:42:42] 2026-01-11 09:42:41,914 [wrapper] Pilot exit status: 0
[2026-01-11 04:42:42] 2026-01-11 09:42:42,025 [wrapper] pandaids: 6965941360
[2026-01-11 04:42:42] 2026-01-11 09:42:42,159 [wrapper] cleanup supervisor_pilot 1436332 3962537
[2026-01-11 04:42:42] 2026-01-11 09:42:42,164 [wrapper] Test setup, not cleaning
[2026-01-11 04:42:42] 2026-01-11 09:42:42,167 [wrapper] apfmon messages muted
[2026-01-11 04:42:42] 2026-01-11 09:42:42,174 [wrapper] ==== wrapper stdout END ====
[2026-01-11 04:42:42] 2026-01-11 09:42:42,189 [wrapper] ==== wrapper stderr END ====
[2026-01-11 04:42:42]  *** Error codes and diagnostics ***
[2026-01-11 04:42:42]     "exeErrorCode": 0,
[2026-01-11 04:42:42]     "exeErrorDiag": "",
[2026-01-11 04:42:42]     "pilotErrorCode": 0,
[2026-01-11 04:42:42]     "pilotErrorDiag": "",
[2026-01-11 04:42:42]  *** Listing of results directory ***
[2026-01-11 04:42:42] total 1151608
[2026-01-11 04:42:42] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-11 04:42:42] -rwx------. 1 boincer umatlas     36322 Jan 10 22:33 runpilot2-wrapper.sh
[2026-01-11 04:42:42] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 22:33 queuedata.json
[2026-01-11 04:42:42] -rw-r--r--. 1 boincer umatlas       100 Jan 10 22:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 04:42:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 22:37 run_atlas
[2026-01-11 04:42:42] -rw-r--r--. 1 boincer umatlas       105 Jan 10 22:37 job.xml
[2026-01-11 04:42:42] -rw-r--r--. 2 boincer umatlas 915501182 Jan 10 22:37 EVNT.48039248._000028.pool.root.1
[2026-01-11 04:42:42] -rw-r--r--. 2 boincer umatlas    592418 Jan 10 22:37 input.tar.gz
[2026-01-11 04:42:42] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:37 start_atlas.sh
[2026-01-11 04:42:42] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 22:37 shared
[2026-01-11 04:42:42] -rw-r--r--. 1 boincer umatlas         0 Jan 10 22:37 boinc_lockfile
[2026-01-11 04:42:42] -rw-r--r--. 1 boincer umatlas      2590 Jan 10 22:37 pandaJob.out
[2026-01-11 04:42:42] -rw-------. 1 boincer umatlas        57 Jan 10 22:37 setup.sh.local
[2026-01-11 04:42:42] -rw-------. 1 boincer umatlas    989548 Jan 10 22:37 agis_schedconf.cvmfs.json
[2026-01-11 04:42:42] drwx------. 5 boincer umatlas      4096 Jan 10 22:37 pilot3
[2026-01-11 04:42:42] -rw-r--r--. 1 boincer umatlas      6840 Jan 11 04:37 init_data.xml
[2026-01-11 04:42:42] -rw-------. 1 boincer umatlas 253674828 Jan 11 04:40 HITS.48039250._006924.pool.root.1
[2026-01-11 04:42:42] -rw-r--r--. 1 boincer umatlas       532 Jan 11 04:40 boinc_task_state.xml
[2026-01-11 04:42:42] -rw-------. 1 boincer umatlas      1043 Jan 11 04:41 memory_monitor_summary.json
[2026-01-11 04:42:42] -rw-------. 1 boincer umatlas   1516240 Jan 11 04:41 agis_ddmendpoints.agis.ALL.json
[2026-01-11 04:42:42] -rw-------. 1 boincer umatlas    529197 Jan 11 04:41 log.48039250._006924.job.log.tgz.1
[2026-01-11 04:42:42] -rw-------. 1 boincer umatlas      7811 Jan 11 04:41 heartbeat.json
[2026-01-11 04:42:42] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 04:42 boinc_mmap_file
[2026-01-11 04:42:42] -rw-r--r--. 1 boincer umatlas        28 Jan 11 04:42 wrapper_checkpoint.txt
[2026-01-11 04:42:42] -rw-------. 1 boincer umatlas        95 Jan 11 04:42 pilot_heartbeat.json
[2026-01-11 04:42:42] -rw-------. 1 boincer umatlas      4941 Jan 11 04:42 pilotlog.txt
[2026-01-11 04:42:42] -rw-------. 1 boincer umatlas   2546096 Jan 11 04:42 log.48039250._006924.job.log.1
[2026-01-11 04:42:42] -rw-------. 1 boincer umatlas       357 Jan 11 04:42 output.list
[2026-01-11 04:42:42] -rw-r--r--. 1 boincer umatlas       620 Jan 11 04:42 runtime_log
[2026-01-11 04:42:42] -rw-------. 1 boincer umatlas   3092480 Jan 11 04:42 result.tar.gz
[2026-01-11 04:42:42] -rw-r--r--. 1 boincer umatlas      9328 Jan 11 04:42 runtime_log.err
[2026-01-11 04:42:42] -rw-------. 1 boincer umatlas       655 Jan 11 04:42 PRBMDmMO1y8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrghKDmWY9bNn.diag
[2026-01-11 04:42:42] -rw-r--r--. 1 boincer umatlas     21197 Jan 11 04:42 stderr.txt
[2026-01-11 04:42:42] HITS file was successfully produced:
[2026-01-11 04:42:42] -rw-------. 1 boincer umatlas 253674828 Jan 11 04:40 shared/HITS.pool.root.1
[2026-01-11 04:42:42]  *** Contents of shared directory: ***
[2026-01-11 04:42:42] total 1145404
[2026-01-11 04:42:42] -rw-r--r--. 2 boincer umatlas 915501182 Jan 10 22:37 ATLAS.root_0
[2026-01-11 04:42:42] -rw-r--r--. 2 boincer umatlas    592418 Jan 10 22:37 input.tar.gz
[2026-01-11 04:42:42] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:37 start_atlas.sh
[2026-01-11 04:42:42] -rw-------. 1 boincer umatlas 253674828 Jan 11 04:40 HITS.pool.root.1
[2026-01-11 04:42:42] -rw-------. 1 boincer umatlas   3092480 Jan 11 04:42 result.tar.gz
04:42:44 (3955021): run_atlas exited; CPU time 59269.371080
04:42:44 (3955021): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN