Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
11:30:56 (948776): wrapper (7.7.26015): starting
11:30:56 (948776): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 11:30:56] Arguments: --nthreads 4
[2026-01-11 11:30:56] Threads: 4
[2026-01-11 11:30:56] Checking for CVMFS
[2026-01-11 11:30:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 11:30:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 11:30:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 11:30:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 11:30:56] 2.12.7.0 11818 516 57696 155013 0 253 3996533 6144001 4518 130560 0 2495271 99.992 23661 772 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-11 11:30:56] CVMFS is ok
[2026-01-11 11:30:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 11:30:56] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-11 11:30:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-11 11:30:56] Further information can be found at the LHC@home message board.
[2026-01-11 11:30:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 11:30:56] Checking for apptainer binary...
[2026-01-11 11:30:56] apptainer is not installed, using version from CVMFS
[2026-01-11 11:30:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 11:30:56] biggy
[2026-01-11 11:30:56] apptainer works
[2026-01-11 11:30:56] Set ATHENA_PROC_NUMBER=4
[2026-01-11 11:30:56] Set ATHENA_CORE_NUMBER=4
[2026-01-11 11:30:56] Starting ATLAS job with PandaID=6965941662
[2026-01-11 11:30:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/single_8TB/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 13:04:17]  *** The last 200 lines of the pilot log: ***
[2026-01-11 13:04:17]  lfn=log.48039250._007130.job.log.tgz.1
[2026-01-11 13:04:17]  mtime=0
[2026-01-11 13:04:17]  protocol_id=None
[2026-01-11 13:04:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 13:04:17]  replicas=None
[2026-01-11 13:04:17]  scope=mc23_13p6TeV
[2026-01-11 13:04:17]  status=None
[2026-01-11 13:04:17]  status_code=0
[2026-01-11 13:04:17]  storage_token=
[2026-01-11 13:04:17]  surl=/single_8TB/boinc-client/slots/5/PanDA_Pilot-6965941662/log.48039250._007130.job.log.tgz.1
[2026-01-11 13:04:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cd/6c/log.48039250._007130.job.log.tgz.1
[2026-01-11 13:04:17]  workdir=None
[2026-01-11 13:04:17] ]
[2026-01-11 13:04:17] 2026-01-11 12:03:36,055 | INFO     | transferring file log.48039250._007130.job.log.tgz.1 from /single_8TB/boinc-client/slots/5/PanDA_Pilot-6965941662/log.48039250._007130.job.log.tgz.1 to /single_8TB
[2026-01-11 13:04:17] 2026-01-11 12:03:36,055 | INFO     | executing command: /usr/bin/env mv /single_8TB/boinc-client/slots/5/PanDA_Pilot-6965941662/log.48039250._007130.job.log.tgz.1 /single_8TB/boinc-client/slots/5/log.
[2026-01-11 13:04:17] 2026-01-11 12:03:36,066 | INFO     | adding to output.list: log.48039250._007130.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cd/6c/log.48039250._007130.job.log.tg
[2026-01-11 13:04:17] 2026-01-11 12:03:36,067 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 13:04:17] 2026-01-11 12:03:36,067 | INFO     | summary of transferred files:
[2026-01-11 13:04:17] 2026-01-11 12:03:36,067 | INFO     |  -- lfn=log.48039250._007130.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 13:04:17] 2026-01-11 12:03:36,067 | INFO     | stage-out finished correctly
[2026-01-11 13:04:17] 2026-01-11 12:03:36,073 | INFO     | time since job start (5555s) is within the limit (349056.0s)
[2026-01-11 13:04:17] 2026-01-11 12:03:36,104 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 13:04:17] 2026-01-11 12:03:36,138 | INFO     | job 6965941662 has state=finished
[2026-01-11 13:04:17] 2026-01-11 12:03:36,138 | INFO     | preparing for final server update for job 6965941662 in state='finished'
[2026-01-11 13:04:17] 2026-01-11 12:03:36,138 | INFO     | this job has now completed (state=finished)
[2026-01-11 13:04:17] 2026-01-11 12:03:36,138 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 13:04:17] 2026-01-11 12:03:36,138 | INFO     | log transfer has been attempted: DONE
[2026-01-11 13:04:17] 2026-01-11 12:03:36,138 | INFO     | job 6965941662 has finished - writing final server update
[2026-01-11 13:04:17] 2026-01-11 12:03:36,138 | INFO     | total number of processed events: 400 (read)
[2026-01-11 13:04:17] 2026-01-11 12:03:36,139 | INFO     | executing command: lscpu
[2026-01-11 13:04:17] 2026-01-11 12:03:36,156 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 13:04:17] 2026-01-11 12:03:37,947 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 13:04:17] 2026-01-11 12:03:37,949 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 5210.075718749999
[2026-01-11 13:04:17] 2026-01-11 12:03:37,952 | INFO     | using path: /single_8TB/boinc-client/slots/5/PanDA_Pilot-6965941662/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 13:04:17] 2026-01-11 12:03:37,952 | INFO     | extracted standard info from prmon json
[2026-01-11 13:04:17] 2026-01-11 12:03:37,952 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 13:04:17] 2026-01-11 12:03:37,952 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 13:04:17] 2026-01-11 12:03:37,952 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 13:04:17] 2026-01-11 12:03:37,952 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 13:04:17] 2026-01-11 12:03:37,953 | INFO     | fitting pss+swap vs Time
[2026-01-11 13:04:17] 2026-01-11 12:03:37,953 | INFO     | sum of square deviations: 183761585.0
[2026-01-11 13:04:17] 2026-01-11 12:03:37,954 | INFO     | sum of deviations: -4921470575.5
[2026-01-11 13:04:17] 2026-01-11 12:03:37,954 | INFO     | mean x: 1768130316.5
[2026-01-11 13:04:17] 2026-01-11 12:03:37,954 | INFO     | mean y: 2392479.25
[2026-01-11 13:04:17] 2026-01-11 12:03:37,954 | INFO     | intersect: 47356148849.51777
[2026-01-11 13:04:17] 2026-01-11 12:03:37,954 | INFO     | chi2: 0.010476789800667819
[2026-01-11 13:04:17] 2026-01-11 12:03:37,954 | INFO     | current memory leak: -26.78 B/s (using 84 data points, chi2=0.01)
[2026-01-11 13:04:17] 2026-01-11 12:03:37,954 | INFO     | could have reported an average CPU frequency of 5236 MHz (7 samples)
[2026-01-11 13:04:17] 2026-01-11 12:03:37,954 | INFO     | ..............................
[2026-01-11 13:04:17] 2026-01-11 12:03:37,954 | INFO     | . Timing measurements:
[2026-01-11 13:04:17] 2026-01-11 12:03:37,954 | INFO     | . get job = 0 s
[2026-01-11 13:04:17] 2026-01-11 12:03:37,954 | INFO     | . initial setup = 1 s
[2026-01-11 13:04:17] 2026-01-11 12:03:37,954 | INFO     | . payload setup = 2 s
[2026-01-11 13:04:17] 2026-01-11 12:03:37,954 | INFO     | . stage-in = 0 s
[2026-01-11 13:04:17] 2026-01-11 12:03:37,954 | INFO     | . payload execution = 5534 s
[2026-01-11 13:04:17] 2026-01-11 12:03:37,954 | INFO     | . stage-out = 0 s
[2026-01-11 13:04:17] 2026-01-11 12:03:37,954 | INFO     | . log creation = 0 s
[2026-01-11 13:04:17] 2026-01-11 12:03:37,954 | INFO     | ..............................
[2026-01-11 13:04:17] 2026-01-11 12:03:38,078 | INFO     | time since job start (5557s) is within the limit (349056.0s)
[2026-01-11 13:04:17] 2026-01-11 12:03:38,276 | INFO     | 
[2026-01-11 13:04:17] 2026-01-11 12:03:38,276 | INFO     | job summary report
[2026-01-11 13:04:17] 2026-01-11 12:03:38,276 | INFO     | --------------------------------------------------
[2026-01-11 13:04:17] 2026-01-11 12:03:38,276 | INFO     | PanDA job id: 6965941662
[2026-01-11 13:04:17] 2026-01-11 12:03:38,276 | INFO     | task id: 48039250
[2026-01-11 13:04:17] 2026-01-11 12:03:38,276 | INFO     | errors: (none)
[2026-01-11 13:04:17] 2026-01-11 12:03:38,276 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 13:04:17] 2026-01-11 12:03:38,276 | INFO     | pilot state: finished 
[2026-01-11 13:04:17] 2026-01-11 12:03:38,276 | INFO     | transexitcode: 0
[2026-01-11 13:04:17] 2026-01-11 12:03:38,276 | INFO     | exeerrorcode: 0
[2026-01-11 13:04:17] 2026-01-11 12:03:38,276 | INFO     | exeerrordiag: 
[2026-01-11 13:04:17] 2026-01-11 12:03:38,276 | INFO     | exitcode: 0
[2026-01-11 13:04:17] 2026-01-11 12:03:38,276 | INFO     | exitmsg: OK
[2026-01-11 13:04:17] 2026-01-11 12:03:38,276 | INFO     | cpuconsumptiontime: 21495 s
[2026-01-11 13:04:17] 2026-01-11 12:03:38,276 | INFO     | nevents: 400
[2026-01-11 13:04:17] 2026-01-11 12:03:38,276 | INFO     | neventsw: 0
[2026-01-11 13:04:17] 2026-01-11 12:03:38,277 | INFO     | pid: 959287
[2026-01-11 13:04:17] 2026-01-11 12:03:38,277 | INFO     | pgrp: 959287
[2026-01-11 13:04:17] 2026-01-11 12:03:38,277 | INFO     | corecount: 4
[2026-01-11 13:04:17] 2026-01-11 12:03:38,277 | INFO     | event service: False
[2026-01-11 13:04:17] 2026-01-11 12:03:38,277 | INFO     | sizes: {0: 2283865, 1: 2284064, 3: 2284326, 11: 2284354, 5540: 2311112, 5541: 2311111, 5542: 2320369, 5543: 2320507}
[2026-01-11 13:04:17] 2026-01-11 12:03:38,277 | INFO     | --------------------------------------------------
[2026-01-11 13:04:17] 2026-01-11 12:03:38,277 | INFO     | 
[2026-01-11 13:04:17] 2026-01-11 12:03:38,277 | INFO     | executing command: ls -lF /single_8TB/boinc-client/slots/5
[2026-01-11 13:04:17] 2026-01-11 12:03:38,289 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 13:04:17] 2026-01-11 12:03:38,289 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 13:04:17] 2026-01-11 12:03:38,289 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 13:04:17] 2026-01-11 12:03:38,289 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 13:04:17] 2026-01-11 12:03:38,289 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 13:04:17] 2026-01-11 12:03:38,289 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 13:04:17] 2026-01-11 12:03:38,289 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 13:04:17] 2026-01-11 12:03:38,289 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 13:04:17] 2026-01-11 12:03:38,289 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 13:04:17] 2026-01-11 12:03:38,289 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 13:04:17] 2026-01-11 12:03:38,289 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 13:04:17] 2026-01-11 12:03:38,290 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 13:04:17] 2026-01-11 12:03:38,290 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 13:04:17] 2026-01-11 12:03:38,290 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 13:04:17] 2026-01-11 12:03:38,290 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 13:04:17] 2026-01-11 12:03:38,290 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 13:04:17] 2026-01-11 12:03:38,290 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 13:04:17] 2026-01-11 12:03:38,290 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 13:04:17] 2026-01-11 12:03:38,290 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 13:04:17] 2026-01-11 12:03:38,290 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 13:04:17] 2026-01-11 12:03:38,290 | INFO     | job 6965941662 has completed (purged errors)
[2026-01-11 13:04:17] 2026-01-11 12:03:38,290 | INFO     | overall cleanup function is called
[2026-01-11 13:04:17] 2026-01-11 12:03:39,230 | INFO     | PID=952610 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 13:04:17] 2026-01-11 12:03:39,230 | INFO     | .. there are 6 such processes running
[2026-01-11 13:04:17] 2026-01-11 12:03:39,297 | INFO     | --- collectZombieJob: --- 10, [959287]
[2026-01-11 13:04:17] 2026-01-11 12:03:39,297 | INFO     | zombie collector waiting for pid 959287
[2026-01-11 13:04:17] 2026-01-11 12:03:39,297 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 13:04:17] 2026-01-11 12:03:39,297 | INFO     | collected zombie processes
[2026-01-11 13:04:17] 2026-01-11 12:03:39,297 | INFO     | will attempt to kill all subprocesses of pid=959287
[2026-01-11 13:04:17] 2026-01-11 12:03:39,415 | INFO     | process IDs to be killed: [959287] (in reverse order)
[2026-01-11 13:04:17] 2026-01-11 12:03:39,462 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 13:04:17] 2026-01-11 12:03:39,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 13:04:17] 2026-01-11 12:03:39,466 | INFO     | did not find any defunct processes belonging to 959287
[2026-01-11 13:04:17] 2026-01-11 12:03:39,470 | INFO     | did not find any defunct processes belonging to 959287
[2026-01-11 13:04:17] 2026-01-11 12:03:39,470 | INFO     | ready for new job
[2026-01-11 13:04:17] 2026-01-11 12:03:39,470 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 13:04:17] 2026-01-11 12:03:39,471 | INFO     | ***************************************
[2026-01-11 13:04:17] 2026-01-11 12:03:39,471 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 13:04:17] 2026-01-11 12:03:39,471 | INFO     | ***************************************
[2026-01-11 13:04:17] 2026-01-11 12:03:39,471 | INFO     | 
[2026-01-11 13:04:17] 2026-01-11 12:03:39,472 | INFO     | architecture information:
[2026-01-11 13:04:17] 2026-01-11 12:03:39,472 | INFO     | executing command: cat /etc/os-release
[2026-01-11 13:04:17] 2026-01-11 12:03:39,480 | INFO     | cat /etc/os-release:
[2026-01-11 13:04:17] NAME="CentOS Linux"
[2026-01-11 13:04:17] VERSION="7 (Core)"
[2026-01-11 13:04:17] ID="centos"
[2026-01-11 13:04:17] ID_LIKE="rhel fedora"
[2026-01-11 13:04:17] VERSION_ID="7"
[2026-01-11 13:04:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 13:04:17] ANSI_COLOR="0;31"
[2026-01-11 13:04:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 13:04:17] HOME_URL="https://www.centos.org/"
[2026-01-11 13:04:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 13:04:17] 
[2026-01-11 13:04:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 13:04:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 13:04:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 13:04:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 13:04:17] 
[2026-01-11 13:04:17] 2026-01-11 12:03:39,480 | INFO     | ***************************************
[2026-01-11 13:04:17] 2026-01-11 12:03:39,982 | INFO     | executing command: df -mP /single_8TB/boinc-client/slots/5
[2026-01-11 13:04:17] 2026-01-11 12:03:39,995 | INFO     | sufficient remaining disk space (3325117333504 B)
[2026-01-11 13:04:17] 2026-01-11 12:03:39,996 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 13:04:17] 2026-01-11 12:03:39,996 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 13:04:17] 2026-01-11 12:03:39,996 | INFO     | update_server=False
[2026-01-11 13:04:17] 2026-01-11 12:03:39,996 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 13:04:17] 2026-01-11 12:03:39,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 13:04:17] 2026-01-11 12:03:39,996 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 13:04:17] 2026-01-11 12:03:39,996 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-11 13:04:17] 2026-01-11 12:03:39,996 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 13:04:17] 2026-01-11 12:03:39,996 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 13:04:17] 2026-01-11 12:03:39,996 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 13:04:17] 2026-01-11 12:03:40,187 | INFO     | all data control threads have been joined
[2026-01-11 13:04:17] 2026-01-11 12:03:40,641 | INFO     | all payload control threads have been joined
[2026-01-11 13:04:17] 2026-01-11 12:03:41,000 | INFO     | [job] retrieve thread has finished
[2026-01-11 13:04:17] 2026-01-11 12:03:41,001 | INFO     | [job] queue monitor thread has finished
[2026-01-11 13:04:17] 2026-01-11 12:03:41,013 | INFO     | [payload] validate_post thread has finished
[2026-01-11 13:04:17] 2026-01-11 12:03:41,047 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 13:04:17] 2026-01-11 12:03:41,103 | INFO     | all job control threads have been joined
[2026-01-11 13:04:17] 2026-01-11 12:03:41,156 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 13:04:17] 2026-01-11 12:03:41,192 | INFO     | [data] control thread has finished
[2026-01-11 13:04:17] 2026-01-11 12:03:41,596 | INFO     | [data] copytool_in thread has finished
[2026-01-11 13:04:17] 2026-01-11 12:03:41,646 | INFO     | [payload] control thread has finished
[2026-01-11 13:04:17] 2026-01-11 12:03:41,844 | WARNING  | process 959287 can no longer be monitored (due to stat problems) - aborting
[2026-01-11 13:04:17] 2026-01-11 12:03:41,921 | INFO     | using path: /single_8TB/boinc-client/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 13:04:17] 2026-01-11 12:03:41,987 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 13:04:17] 2026-01-11 12:03:42,001 | INFO     | [data] copytool_out thread has finished
[2026-01-11 13:04:17] 2026-01-11 12:03:42,027 | INFO     | number of running child processes to parent process 959287: 1
[2026-01-11 13:04:17] 2026-01-11 12:03:42,027 | INFO     | maximum number of monitored processes: 6
[2026-01-11 13:04:17] 2026-01-11 12:03:42,027 | INFO     | aborting job monitoring since job object (job id=6965941662) has expired
[2026-01-11 13:04:17] 2026-01-11 12:03:42,027 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 13:04:17] 2026-01-11 12:03:42,027 | INFO     | will abort loop
[2026-01-11 13:04:17] 2026-01-11 12:03:42,108 | INFO     | [job] control thread has finished
[2026-01-11 13:04:17] 2026-01-11 12:03:42,142 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 13:04:17] 2026-01-11 12:03:42,201 | INFO     | [payload] failed_post thread has finished
[2026-01-11 13:04:17] 2026-01-11 12:03:42,374 | INFO     | [job] validate thread has finished
[2026-01-11 13:04:17] 2026-01-11 12:03:42,420 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 13:04:17] 2026-01-11 12:03:43,032 | INFO     | [job] job monitor thread has finished
[2026-01-11 13:04:17] 2026-01-11 12:03:46,146 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 13:04:17] 2026-01-11 12:04:10,657 | INFO     | [monitor] cgroup control has ended
[2026-01-11 13:04:17] 2026-01-11 12:04:11,740 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132281187981120)>', '<ExcThread(monitor, started 132280790001408)>']
[2026-01-11 13:04:17] 2026-01-11 12:04:12,151 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 13:04:17] 2026-01-11 12:04:12,151 | INFO     | [monitor] control thread has ended
[2026-01-11 13:04:17] 2026-01-11 12:04:16,766 | INFO     | all workflow threads have been joined
[2026-01-11 13:04:17] 2026-01-11 12:04:16,766 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 13:04:17] 2026-01-11 12:04:16,766 | INFO     | traces error code: 0
[2026-01-11 13:04:17] 2026-01-11 12:04:16,766 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 13:04:17] 2026-01-11 12:04:16,817 [wrapper] ==== pilot stdout END ====
[2026-01-11 13:04:17] 2026-01-11 12:04:16,819 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 13:04:17] 2026-01-11 12:04:16,820 [wrapper] pilotpid: 952610
[2026-01-11 13:04:17] 2026-01-11 12:04:16,822 [wrapper] Pilot exit status: 0
[2026-01-11 13:04:17] 2026-01-11 12:04:16,826 [wrapper] pandaids: 6965941662
[2026-01-11 13:04:17] 2026-01-11 12:04:16,857 [wrapper] cleanup supervisor_pilot 1094475 952611
[2026-01-11 13:04:17] 2026-01-11 12:04:16,859 [wrapper] Test setup, not cleaning
[2026-01-11 13:04:17] 2026-01-11 12:04:16,860 [wrapper] apfmon messages muted
[2026-01-11 13:04:17] 2026-01-11 12:04:16,861 [wrapper] ==== wrapper stdout END ====
[2026-01-11 13:04:17] 2026-01-11 12:04:16,863 [wrapper] ==== wrapper stderr END ====
[2026-01-11 13:04:17]  *** Error codes and diagnostics ***
[2026-01-11 13:04:17]     "exeErrorCode": 0,
[2026-01-11 13:04:17]     "exeErrorDiag": "",
[2026-01-11 13:04:17]     "pilotErrorCode": 0,
[2026-01-11 13:04:17]     "pilotErrorDiag": "",
[2026-01-11 13:04:17]  *** Listing of results directory ***
[2026-01-11 13:04:17] total 1151896
[2026-01-11 13:04:17] -rw-r--r-- 1 boinc boinc    579449 Jan 11 04:29 pilot3.tar.gz
[2026-01-11 13:04:17] -rw-r--r-- 1 boinc boinc      5112 Jan 11 04:33 queuedata.json
[2026-01-11 13:04:17] -rwx------ 1 boinc boinc     36322 Jan 11 04:33 runpilot2-wrapper.sh
[2026-01-11 13:04:17] -rw-r--r-- 1 boinc boinc       105 Jan 11 11:30 job.xml
[2026-01-11 13:04:17] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 11:30 run_atlas
[2026-01-11 13:04:17] -rw-r--r-- 1 boinc boinc       100 Jan 11 11:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 13:04:17] -rw-r--r-- 2 boinc boinc 918364769 Jan 11 11:30 EVNT.48039248._000064.pool.root.1
[2026-01-11 13:04:17] -rw-r--r-- 2 boinc boinc    592415 Jan 11 11:30 input.tar.gz
[2026-01-11 13:04:17] drwxrwx--x 2 boinc boinc         5 Jan 11 11:30 shared
[2026-01-11 13:04:17] -rw-r--r-- 1 boinc boinc         0 Jan 11 11:30 boinc_setup_complete
[2026-01-11 13:04:17] -rw-r--r-- 2 boinc boinc     15847 Jan 11 11:30 start_atlas.sh
[2026-01-11 13:04:17] -rw-r--r-- 1 boinc boinc     10105 Jan 11 11:30 init_data.xml
[2026-01-11 13:04:17] -rw-r--r-- 1 boinc boinc         0 Jan 11 11:30 boinc_lockfile
[2026-01-11 13:04:17] -rw-r--r-- 1 boinc boinc      2592 Jan 11 11:30 pandaJob.out
[2026-01-11 13:04:17] -rw------- 1 boinc boinc    989548 Jan 11 11:31 agis_schedconf.cvmfs.json
[2026-01-11 13:04:17] -rw------- 1 boinc boinc   1516240 Jan 11 11:31 agis_ddmendpoints.agis.ALL.json
[2026-01-11 13:04:17] drwx------ 5 boinc boinc        22 Jan 11 11:31 pilot3
[2026-01-11 13:04:17] -rw------- 1 boinc boinc        95 Jan 11 13:02 pilot_heartbeat.json
[2026-01-11 13:04:17] -rw------- 1 boinc boinc 255172961 Jan 11 13:03 HITS.48039250._007130.pool.root.1
[2026-01-11 13:04:17] -rw-r--r-- 1 boinc boinc       530 Jan 11 13:03 boinc_task_state.xml
[2026-01-11 13:04:17] -rw------- 1 boinc boinc      1037 Jan 11 13:03 memory_monitor_summary.json
[2026-01-11 13:04:17] -rw------- 1 boinc boinc    277342 Jan 11 13:03 log.48039250._007130.job.log.tgz.1
[2026-01-11 13:04:17] -rw------- 1 boinc boinc      7755 Jan 11 13:03 heartbeat.json
[2026-01-11 13:04:17] -rw-r--r-- 1 boinc boinc      8192 Jan 11 13:03 boinc_mmap_file
[2026-01-11 13:04:17] -rw-r--r-- 1 boinc boinc        27 Jan 11 13:03 wrapper_checkpoint.txt
[2026-01-11 13:04:17] -rw------- 1 boinc boinc      5093 Jan 11 13:04 pilotlog.txt
[2026-01-11 13:04:17] -rw------- 1 boinc boinc    830743 Jan 11 13:04 log.48039250._007130.job.log.1
[2026-01-11 13:04:17] -rw------- 1 boinc boinc       357 Jan 11 13:04 output.list
[2026-01-11 13:04:17] -rw-r--r-- 1 boinc boinc       620 Jan 11 13:04 runtime_log
[2026-01-11 13:04:17] -rw------- 1 boinc boinc   1126400 Jan 11 13:04 result.tar.gz
[2026-01-11 13:04:17] -rw-r--r-- 1 boinc boinc      8939 Jan 11 13:04 runtime_log.err
[2026-01-11 13:04:17] -rw------- 1 boinc boinc       651 Jan 11 13:04 WuoLDmMO1y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZzmKDmq94LWm.diag
[2026-01-11 13:04:17] -rw-r--r-- 1 boinc boinc     21826 Jan 11 13:04 stderr.txt
[2026-01-11 13:04:17] HITS file was successfully produced:
[2026-01-11 13:04:17] -rw------- 1 boinc boinc 255172961 Jan 11 13:03 shared/HITS.pool.root.1
[2026-01-11 13:04:17]  *** Contents of shared directory: ***
[2026-01-11 13:04:17] total 1147528
[2026-01-11 13:04:17] -rw-r--r-- 2 boinc boinc 918364769 Jan 11 11:30 ATLAS.root_0
[2026-01-11 13:04:17] -rw-r--r-- 2 boinc boinc    592415 Jan 11 11:30 input.tar.gz
[2026-01-11 13:04:17] -rw-r--r-- 2 boinc boinc     15847 Jan 11 11:30 start_atlas.sh
[2026-01-11 13:04:17] -rw------- 1 boinc boinc 255172961 Jan 11 13:03 HITS.pool.root.1
[2026-01-11 13:04:17] -rw------- 1 boinc boinc   1126400 Jan 11 13:04 result.tar.gz
13:04:18 (948776): run_atlas exited; CPU time 21556.933991
13:04:18 (948776): called boinc_finish(0)

</stderr_txt>
]]>

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