Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:32:56 (640119): wrapper (7.7.26015): starting
22:32:56 (640119): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 22:32:56] Arguments: --nthreads 8
[2026-01-10 22:32:56] Threads: 8
[2026-01-10 22:32:56] Checking for CVMFS
[2026-01-10 22:32:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 22:32:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 22:32:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 22:32:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 22:32:58] 2.13.3.0 5979 56413 249564 155002 1 57 17459531 32935937 12167 16776704 0 87548902 99.468 127350986 41828 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 22:32:58] CVMFS is ok
[2026-01-10 22:32:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 22:32:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 22:32:58] Further information can be found at the LHC@home message board.
[2026-01-10 22:32:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 22:32:58] Checking for apptainer binary...
[2026-01-10 22:32:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 22:32:58] Running /usr/bin/apptainer --version
[2026-01-10 22:32:59] apptainer version 1.4.5-2.el9
[2026-01-10 22:32:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 22:33:00] c6-1-26-4.aglt2.org
[2026-01-10 22:33:00] apptainer works
[2026-01-10 22:33:00] Set ATHENA_PROC_NUMBER=8
[2026-01-10 22:33:00] Set ATHENA_CORE_NUMBER=8
[2026-01-10 22:33:00] Starting ATLAS job with PandaID=6965941508
[2026-01-10 22:33:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 02:36:21]  *** The last 200 lines of the pilot log: ***
[2026-01-11 02:36:21] 2026-01-11 07:35:46,515 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 02:36:21] 2026-01-11 07:35:46,523 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3011.0775714285724
[2026-01-11 02:36:21] 2026-01-11 07:35:46,549 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965941508/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 02:36:21] 2026-01-11 07:35:46,550 | INFO     | extracted standard info from prmon json
[2026-01-11 02:36:21] 2026-01-11 07:35:46,550 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 02:36:21] 2026-01-11 07:35:46,550 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 02:36:21] 2026-01-11 07:35:46,551 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 02:36:21] 2026-01-11 07:35:46,551 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 02:36:21] 2026-01-11 07:35:46,559 | INFO     | fitting pss+swap vs Time
[2026-01-11 02:36:21] 2026-01-11 07:35:46,559 | INFO     | sum of square deviations: 4127685580.455691
[2026-01-11 02:36:21] 2026-01-11 07:35:46,561 | INFO     | sum of deviations: 7561108618.227875
[2026-01-11 02:36:21] 2026-01-11 07:35:46,561 | INFO     | mean x: 1768109678.1898735
[2026-01-11 02:36:21] 2026-01-11 07:35:46,561 | INFO     | mean y: 2565503.2616033754
[2026-01-11 02:36:21] 2026-01-11 07:35:46,561 | INFO     | intersect: -3236263875.854444
[2026-01-11 02:36:21] 2026-01-11 07:35:46,562 | INFO     | chi2: 2.308104465952035
[2026-01-11 02:36:21] 2026-01-11 07:35:46,566 | INFO     | sum of square deviations: 3871903185.655167
[2026-01-11 02:36:21] 2026-01-11 07:35:46,568 | INFO     | sum of deviations: 22674092817.793114
[2026-01-11 02:36:21] 2026-01-11 07:35:46,568 | INFO     | mean x: 1768109525.689655
[2026-01-11 02:36:21] 2026-01-11 07:35:46,568 | INFO     | mean y: 2574358.1637931033
[2026-01-11 02:36:21] 2026-01-11 07:35:46,568 | INFO     | intersect: -10351579032.354853
[2026-01-11 02:36:21] 2026-01-11 07:35:46,569 | INFO     | chi2: 1.621809863974864
[2026-01-11 02:36:21] 2026-01-11 07:35:46,569 | INFO     | current chi2=1.621809863974864 (change=29.734122181254552 %)
[2026-01-11 02:36:21] 2026-01-11 07:35:46,569 | INFO     | sum of square deviations: 3626911812.854633
[2026-01-11 02:36:21] 2026-01-11 07:35:46,574 | INFO     | sum of deviations: 22234005033.23349
[2026-01-11 02:36:21] 2026-01-11 07:35:46,575 | INFO     | mean x: 1768109373.1894274
[2026-01-11 02:36:21] 2026-01-11 07:35:46,575 | INFO     | mean y: 2574084.18061674
[2026-01-11 02:36:21] 2026-01-11 07:35:46,575 | INFO     | intersect: -10836441235.538345
[2026-01-11 02:36:21] 2026-01-11 07:35:46,575 | INFO     | chi2: 1.6226885678037701
[2026-01-11 02:36:21] 2026-01-11 07:35:46,575 | INFO     | current chi2=1.6226885678037701 (change=-0.05418044669876425 %)
[2026-01-11 02:36:21] 2026-01-11 07:35:46,575 | INFO     | right removable region: 226
[2026-01-11 02:36:21] 2026-01-11 07:35:46,576 | INFO     | sum of square deviations: 3871890315.2715573
[2026-01-11 02:36:21] 2026-01-11 07:35:46,577 | INFO     | sum of deviations: -31403915920.525856
[2026-01-11 02:36:21] 2026-01-11 07:35:46,577 | INFO     | mean x: 1768109830.6939654
[2026-01-11 02:36:21] 2026-01-11 07:35:46,578 | INFO     | mean y: 2588524.7672413792
[2026-01-11 02:36:21] 2026-01-11 07:35:46,578 | INFO     | intersect: 14343276906.967493
[2026-01-11 02:36:21] 2026-01-11 07:35:46,582 | INFO     | chi2: 0.810959754760398
[2026-01-11 02:36:21] 2026-01-11 07:35:46,582 | INFO     | current chi2=0.810959754760398 (change=64.86468586135257 %)
[2026-01-11 02:36:21] 2026-01-11 07:35:46,583 | INFO     | sum of square deviations: 3626928404.229058
[2026-01-11 02:36:21] 2026-01-11 07:35:46,584 | INFO     | sum of deviations: -34914719050.334785
[2026-01-11 02:36:21] 2026-01-11 07:35:46,584 | INFO     | mean x: 1768109983.185022
[2026-01-11 02:36:21] 2026-01-11 07:35:46,584 | INFO     | mean y: 2590678.960352423
[2026-01-11 02:36:21] 2026-01-11 07:35:46,584 | INFO     | intersect: 17023346655.564537
[2026-01-11 02:36:21] 2026-01-11 07:35:46,585 | INFO     | chi2: 0.782856044705376
[2026-01-11 02:36:21] 2026-01-11 07:35:46,585 | INFO     | current chi2=0.782856044705376 (change=3.465487638572826 %)
[2026-01-11 02:36:21] 2026-01-11 07:35:46,585 | INFO     | left removable region: 20
[2026-01-11 02:36:21] 2026-01-11 07:35:46,585 | INFO     | sum of square deviations: 2710598019.5534024
[2026-01-11 02:36:21] 2026-01-11 07:35:46,591 | INFO     | sum of deviations: -12368913051.466022
[2026-01-11 02:36:21] 2026-01-11 07:35:46,591 | INFO     | mean x: 1768109952.6699028
[2026-01-11 02:36:21] 2026-01-11 07:35:46,591 | INFO     | mean y: 2595971.199029126
[2026-01-11 02:36:21] 2026-01-11 07:35:46,591 | INFO     | intersect: 8070778015.251788
[2026-01-11 02:36:21] 2026-01-11 07:35:46,591 | INFO     | chi2: 0.0716294912556026
[2026-01-11 02:36:21] 2026-01-11 07:35:46,592 | INFO     | current memory leak: -4.56 B/s (using 206 data points, chi2=0.07)
[2026-01-11 02:36:21] 2026-01-11 07:35:46,592 | INFO     | could have reported an average CPU frequency of 3049 MHz (11 samples)
[2026-01-11 02:36:21] 2026-01-11 07:35:46,592 | INFO     | ..............................
[2026-01-11 02:36:21] 2026-01-11 07:35:46,592 | INFO     | . Timing measurements:
[2026-01-11 02:36:21] 2026-01-11 07:35:46,592 | INFO     | . get job = 0 s
[2026-01-11 02:36:21] 2026-01-11 07:35:46,593 | INFO     | . initial setup = 5 s
[2026-01-11 02:36:21] 2026-01-11 07:35:46,593 | INFO     | . payload setup = 18 s
[2026-01-11 02:36:21] 2026-01-11 07:35:46,593 | INFO     | . stage-in = 0 s
[2026-01-11 02:36:21] 2026-01-11 07:35:46,593 | INFO     | . payload execution = 14451 s
[2026-01-11 02:36:21] 2026-01-11 07:35:46,593 | INFO     | . stage-out = 3 s
[2026-01-11 02:36:21] 2026-01-11 07:35:46,593 | INFO     | . log creation = 0 s
[2026-01-11 02:36:21] 2026-01-11 07:35:46,593 | INFO     | ..............................
[2026-01-11 02:36:21] 2026-01-11 07:35:47,354 | INFO     | 
[2026-01-11 02:36:21] 2026-01-11 07:35:47,354 | INFO     | job summary report
[2026-01-11 02:36:21] 2026-01-11 07:35:47,354 | INFO     | --------------------------------------------------
[2026-01-11 02:36:21] 2026-01-11 07:35:47,354 | INFO     | PanDA job id: 6965941508
[2026-01-11 02:36:21] 2026-01-11 07:35:47,354 | INFO     | task id: 48039250
[2026-01-11 02:36:21] 2026-01-11 07:35:47,354 | INFO     | errors: (none)
[2026-01-11 02:36:21] 2026-01-11 07:35:47,354 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 02:36:21] 2026-01-11 07:35:47,354 | INFO     | pilot state: finished 
[2026-01-11 02:36:21] 2026-01-11 07:35:47,354 | INFO     | transexitcode: 0
[2026-01-11 02:36:21] 2026-01-11 07:35:47,354 | INFO     | exeerrorcode: 0
[2026-01-11 02:36:21] 2026-01-11 07:35:47,354 | INFO     | exeerrordiag: 
[2026-01-11 02:36:21] 2026-01-11 07:35:47,355 | INFO     | exitcode: 0
[2026-01-11 02:36:21] 2026-01-11 07:35:47,355 | INFO     | exitmsg: OK
[2026-01-11 02:36:21] 2026-01-11 07:35:47,355 | INFO     | cpuconsumptiontime: 52913 s
[2026-01-11 02:36:21] 2026-01-11 07:35:47,355 | INFO     | nevents: 400
[2026-01-11 02:36:21] 2026-01-11 07:35:47,355 | INFO     | neventsw: 0
[2026-01-11 02:36:21] 2026-01-11 07:35:47,355 | INFO     | pid: 658355
[2026-01-11 02:36:21] 2026-01-11 07:35:47,355 | INFO     | pgrp: 658355
[2026-01-11 02:36:21] 2026-01-11 07:35:47,355 | INFO     | corecount: 8
[2026-01-11 02:36:21] 2026-01-11 07:35:47,355 | INFO     | event service: False
[2026-01-11 02:36:21] 2026-01-11 07:35:47,355 | INFO     | sizes: {0: 2283857, 1: 2284056, 12: 2284056, 15: 2284346, 23: 2284374, 14473: 2315663, 14477: 2324661, 14478: 2324717, 14505: 2324911}
[2026-01-11 02:36:21] 2026-01-11 07:35:47,355 | INFO     | --------------------------------------------------
[2026-01-11 02:36:21] 2026-01-11 07:35:47,355 | INFO     | 
[2026-01-11 02:36:21] 2026-01-11 07:35:47,355 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 02:36:21] 2026-01-11 07:35:47,412 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 02:36:21] 2026-01-11 07:35:47,413 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 02:36:21] 2026-01-11 07:35:47,413 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 02:36:21] 2026-01-11 07:35:47,413 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 02:36:21] 2026-01-11 07:35:47,413 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 02:36:21] 2026-01-11 07:35:47,413 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 02:36:21] 2026-01-11 07:35:47,413 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 02:36:21] 2026-01-11 07:35:47,413 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 02:36:21] 2026-01-11 07:35:47,413 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 02:36:21] 2026-01-11 07:35:47,413 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 02:36:21] 2026-01-11 07:35:47,413 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 02:36:21] 2026-01-11 07:35:47,413 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 02:36:21] 2026-01-11 07:35:47,413 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 02:36:21] 2026-01-11 07:35:47,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 02:36:21] 2026-01-11 07:35:47,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 02:36:21] 2026-01-11 07:35:47,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 02:36:21] 2026-01-11 07:35:47,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 02:36:21] 2026-01-11 07:35:47,414 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 02:36:21] 2026-01-11 07:35:47,414 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 02:36:21] 2026-01-11 07:35:47,414 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 02:36:21] 2026-01-11 07:35:47,414 | INFO     | job 6965941508 has completed (purged errors)
[2026-01-11 02:36:21] 2026-01-11 07:35:47,414 | INFO     | overall cleanup function is called
[2026-01-11 02:36:21] 2026-01-11 07:35:47,583 | INFO     | PID=644932 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 02:36:21] 2026-01-11 07:35:47,583 | INFO     | .. there are 10 such processes running
[2026-01-11 02:36:21] 2026-01-11 07:35:48,431 | INFO     | --- collectZombieJob: --- 10, [658355]
[2026-01-11 02:36:21] 2026-01-11 07:35:48,431 | INFO     | zombie collector waiting for pid 658355
[2026-01-11 02:36:21] 2026-01-11 07:35:48,431 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 02:36:21] 2026-01-11 07:35:48,431 | INFO     | collected zombie processes
[2026-01-11 02:36:21] 2026-01-11 07:35:48,431 | INFO     | will attempt to kill all subprocesses of pid=658355
[2026-01-11 02:36:21] 2026-01-11 07:35:49,032 | INFO     | process IDs to be killed: [658355] (in reverse order)
[2026-01-11 02:36:21] 2026-01-11 07:35:49,348 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 02:36:21] 2026-01-11 07:35:49,348 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 02:36:21] 2026-01-11 07:35:49,374 | INFO     | did not find any defunct processes belonging to 658355
[2026-01-11 02:36:21] 2026-01-11 07:35:49,385 | INFO     | did not find any defunct processes belonging to 658355
[2026-01-11 02:36:21] 2026-01-11 07:35:49,385 | INFO     | ready for new job
[2026-01-11 02:36:21] 2026-01-11 07:35:49,385 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 02:36:21] 2026-01-11 07:35:49,387 | INFO     | ***************************************
[2026-01-11 02:36:21] 2026-01-11 07:35:49,387 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 02:36:21] 2026-01-11 07:35:49,387 | INFO     | ***************************************
[2026-01-11 02:36:21] 2026-01-11 07:35:49,387 | INFO     | 
[2026-01-11 02:36:21] 2026-01-11 07:35:49,390 | INFO     | architecture information:
[2026-01-11 02:36:21] 2026-01-11 07:35:49,391 | INFO     | executing command: cat /etc/os-release
[2026-01-11 02:36:21] 2026-01-11 07:35:49,408 | INFO     | cat /etc/os-release:
[2026-01-11 02:36:21] NAME="CentOS Linux"
[2026-01-11 02:36:21] VERSION="7 (Core)"
[2026-01-11 02:36:21] ID="centos"
[2026-01-11 02:36:21] ID_LIKE="rhel fedora"
[2026-01-11 02:36:21] VERSION_ID="7"
[2026-01-11 02:36:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 02:36:21] ANSI_COLOR="0;31"
[2026-01-11 02:36:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 02:36:21] HOME_URL="https://www.centos.org/"
[2026-01-11 02:36:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 02:36:21] 
[2026-01-11 02:36:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 02:36:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 02:36:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 02:36:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 02:36:21] 
[2026-01-11 02:36:21] 2026-01-11 07:35:49,408 | INFO     | ***************************************
[2026-01-11 02:36:21] 2026-01-11 07:35:49,912 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 02:36:21] 2026-01-11 07:35:49,964 | INFO     | sufficient remaining disk space (69909610496 B)
[2026-01-11 02:36:21] 2026-01-11 07:35:49,965 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 02:36:21] 2026-01-11 07:35:49,965 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 02:36:21] 2026-01-11 07:35:49,965 | INFO     | update_server=False
[2026-01-11 02:36:21] 2026-01-11 07:35:49,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 02:36:21] 2026-01-11 07:35:49,966 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 02:36:21] 2026-01-11 07:35:49,989 | INFO     | [monitor] cgroup control has ended
[2026-01-11 02:36:21] 2026-01-11 07:35:50,055 | INFO     | all data control threads have been joined
[2026-01-11 02:36:21] 2026-01-11 07:35:50,261 | INFO     | all job control threads have been joined
[2026-01-11 02:36:21] 2026-01-11 07:35:50,412 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 02:36:21] 2026-01-11 07:35:50,412 | INFO     | aborting loop
[2026-01-11 02:36:21] 2026-01-11 07:35:50,971 | INFO     | [job] retrieve thread has finished
[2026-01-11 02:36:21] 2026-01-11 07:35:50,998 | INFO     | [payload] failed_post thread has finished
[2026-01-11 02:36:21] 2026-01-11 07:35:51,027 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 02:36:21] 2026-01-11 07:35:51,061 | INFO     | [data] control thread has finished
[2026-01-11 02:36:21] 2026-01-11 07:35:51,267 | INFO     | [job] control thread has finished
[2026-01-11 02:36:21] 2026-01-11 07:35:51,267 | INFO     | all payload control threads have been joined
[2026-01-11 02:36:21] 2026-01-11 07:35:51,326 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 02:36:21] 2026-01-11 07:35:51,418 | INFO     | [job] job monitor thread has finished
[2026-01-11 02:36:21] 2026-01-11 07:35:51,602 | INFO     | [payload] validate_post thread has finished
[2026-01-11 02:36:21] 2026-01-11 07:35:51,633 | INFO     | [data] copytool_in thread has finished
[2026-01-11 02:36:21] 2026-01-11 07:35:51,812 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 02:36:21] 2026-01-11 07:35:51,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 02:36:21] 2026-01-11 07:35:51,973 | INFO     | [data] copytool_out thread has finished
[2026-01-11 02:36:21] 2026-01-11 07:35:52,111 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 02:36:21] 2026-01-11 07:35:52,213 | INFO     | [job] validate thread has finished
[2026-01-11 02:36:21] 2026-01-11 07:35:52,273 | INFO     | [payload] control thread has finished
[2026-01-11 02:36:21] 2026-01-11 07:35:52,897 | INFO     | [job] queue monitor thread has finished
[2026-01-11 02:36:21] 2026-01-11 07:35:52,980 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 02:36:21] 2026-01-11 07:35:56,992 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 02:36:21] 2026-01-11 07:35:57,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139962408380224)>', '<ExcThread(monitor, started 139962135582464)>']
[2026-01-11 02:36:21] 2026-01-11 07:36:02,132 | INFO     | all workflow threads have been joined
[2026-01-11 02:36:21] 2026-01-11 07:36:02,132 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 02:36:21] 2026-01-11 07:36:02,132 | INFO     | traces error code: 0
[2026-01-11 02:36:21] 2026-01-11 07:36:02,133 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 02:36:21] 2026-01-11 07:36:20,561 | INFO     | PID=644932 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 02:36:21] 2026-01-11 07:36:20,562 | INFO     | .. there are 10 such processes running
[2026-01-11 02:36:21] 2026-01-11 07:36:20,562 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 02:36:21] 2026-01-11 07:36:20,562 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 02:36:21] 2026-01-11 07:36:20,562 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 02:36:21] 2026-01-11 07:36:20,562 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 02:36:21] 2026-01-11 07:36:20,562 | INFO     | [monitor] control thread has ended
[2026-01-11 02:36:21] 2026-01-11 07:36:20,928 [wrapper] ==== pilot stdout END ====
[2026-01-11 02:36:21] 2026-01-11 07:36:20,964 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 02:36:21] 2026-01-11 07:36:21,007 [wrapper] pilotpid: 644932
[2026-01-11 02:36:21] 2026-01-11 07:36:21,023 [wrapper] Pilot exit status: 0
[2026-01-11 02:36:21] 2026-01-11 07:36:21,176 [wrapper] pandaids: 6965941508
[2026-01-11 02:36:21] 2026-01-11 07:36:21,300 [wrapper] cleanup supervisor_pilot 1170629 644933
[2026-01-11 02:36:21] 2026-01-11 07:36:21,303 [wrapper] Test setup, not cleaning
[2026-01-11 02:36:21] 2026-01-11 07:36:21,305 [wrapper] apfmon messages muted
[2026-01-11 02:36:21] 2026-01-11 07:36:21,308 [wrapper] ==== wrapper stdout END ====
[2026-01-11 02:36:21] 2026-01-11 07:36:21,310 [wrapper] ==== wrapper stderr END ====
[2026-01-11 02:36:21]  *** Error codes and diagnostics ***
[2026-01-11 02:36:21]     "exeErrorCode": 0,
[2026-01-11 02:36:21]     "exeErrorDiag": "",
[2026-01-11 02:36:21]     "pilotErrorCode": 0,
[2026-01-11 02:36:21]     "pilotErrorDiag": "",
[2026-01-11 02:36:21]  *** Listing of results directory ***
[2026-01-11 02:36:21] total 1157036
[2026-01-11 02:36:21] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-11 02:36:21] -rwx------. 1 boincer umatlas     36322 Jan 10 22:31 runpilot2-wrapper.sh
[2026-01-11 02:36:21] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 22:31 queuedata.json
[2026-01-11 02:36:21] -rw-r--r--. 1 boincer umatlas       100 Jan 10 22:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 02:36:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 22:32 run_atlas
[2026-01-11 02:36:21] -rw-r--r--. 1 boincer umatlas       105 Jan 10 22:32 job.xml
[2026-01-11 02:36:21] -rw-r--r--. 2 boincer umatlas 922890182 Jan 10 22:32 EVNT.48039248._000049.pool.root.1
[2026-01-11 02:36:21] -rw-r--r--. 2 boincer umatlas    592419 Jan 10 22:32 input.tar.gz
[2026-01-11 02:36:21] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:32 start_atlas.sh
[2026-01-11 02:36:21] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 22:32 shared
[2026-01-11 02:36:21] -rw-r--r--. 1 boincer umatlas         0 Jan 10 22:32 boinc_lockfile
[2026-01-11 02:36:21] -rw-r--r--. 1 boincer umatlas      2593 Jan 10 22:33 pandaJob.out
[2026-01-11 02:36:21] -rw-------. 1 boincer umatlas        57 Jan 10 22:33 setup.sh.local
[2026-01-11 02:36:21] -rw-------. 1 boincer umatlas    989548 Jan 10 22:33 agis_schedconf.cvmfs.json
[2026-01-11 02:36:21] drwx------. 5 boincer umatlas      4096 Jan 10 22:33 pilot3
[2026-01-11 02:36:21] -rw-------. 1 boincer umatlas 253086650 Jan 11 02:34 HITS.48039250._006976.pool.root.1
[2026-01-11 02:36:21] -rw-r--r--. 1 boincer umatlas       532 Jan 11 02:34 boinc_task_state.xml
[2026-01-11 02:36:21] -rw-------. 1 boincer umatlas      1037 Jan 11 02:35 memory_monitor_summary.json
[2026-01-11 02:36:21] -rw-------. 1 boincer umatlas   1516240 Jan 11 02:35 agis_ddmendpoints.agis.ALL.json
[2026-01-11 02:36:21] -rw-------. 1 boincer umatlas    499199 Jan 11 02:35 log.48039250._006976.job.log.tgz.1
[2026-01-11 02:36:21] -rw-------. 1 boincer umatlas        95 Jan 11 02:35 pilot_heartbeat.json
[2026-01-11 02:36:21] -rw-------. 1 boincer umatlas      7815 Jan 11 02:35 heartbeat.json
[2026-01-11 02:36:21] -rw-r--r--. 1 boincer umatlas      6843 Jan 11 02:36 init_data.xml
[2026-01-11 02:36:21] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 02:36 boinc_mmap_file
[2026-01-11 02:36:21] -rw-r--r--. 1 boincer umatlas        28 Jan 11 02:36 wrapper_checkpoint.txt
[2026-01-11 02:36:21] -rw-------. 1 boincer umatlas       822 Jan 11 02:36 pilotlog.txt
[2026-01-11 02:36:21] -rw-------. 1 boincer umatlas   1960605 Jan 11 02:36 log.48039250._006976.job.log.1
[2026-01-11 02:36:21] -rw-------. 1 boincer umatlas       357 Jan 11 02:36 output.list
[2026-01-11 02:36:21] -rw-r--r--. 1 boincer umatlas       620 Jan 11 02:36 runtime_log
[2026-01-11 02:36:21] -rw-------. 1 boincer umatlas   2478080 Jan 11 02:36 result.tar.gz
[2026-01-11 02:36:21] -rw-------. 1 boincer umatlas       657 Jan 11 02:36 XntKDmiL1y8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXfhKDmKdUbam.diag
[2026-01-11 02:36:21] -rw-r--r--. 1 boincer umatlas      9348 Jan 11 02:36 runtime_log.err
[2026-01-11 02:36:21] -rw-r--r--. 1 boincer umatlas     21265 Jan 11 02:36 stderr.txt
[2026-01-11 02:36:21] HITS file was successfully produced:
[2026-01-11 02:36:21] -rw-------. 1 boincer umatlas 253086650 Jan 11 02:34 shared/HITS.pool.root.1
[2026-01-11 02:36:21]  *** Contents of shared directory: ***
[2026-01-11 02:36:21] total 1151440
[2026-01-11 02:36:21] -rw-r--r--. 2 boincer umatlas 922890182 Jan 10 22:32 ATLAS.root_0
[2026-01-11 02:36:21] -rw-r--r--. 2 boincer umatlas    592419 Jan 10 22:32 input.tar.gz
[2026-01-11 02:36:21] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:32 start_atlas.sh
[2026-01-11 02:36:21] -rw-------. 1 boincer umatlas 253086650 Jan 11 02:34 HITS.pool.root.1
[2026-01-11 02:36:21] -rw-------. 1 boincer umatlas   2478080 Jan 11 02:36 result.tar.gz
02:36:23 (640119): run_atlas exited; CPU time 53310.378306
02:36:23 (640119): called boinc_finish(0)

</stderr_txt>
]]>

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