Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:33:03 (1590051): wrapper (7.7.26015): starting
22:33:03 (1590051): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 22:33:03] Arguments: --nthreads 9
[2026-01-10 22:33:03] Threads: 9
[2026-01-10 22:33:03] Checking for CVMFS
[2026-01-10 22:33:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 22:33:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 22:33:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 22:33:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 22:33:04] 2.13.3.0 14337 95703 401964 155002 0 65 34680530 40960000 12579 16776704 0 408933872 99.635 405741135 37998 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 22:33:04] CVMFS is ok
[2026-01-10 22:33:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 22:33:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 22:33:04] Further information can be found at the LHC@home message board.
[2026-01-10 22:33:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 22:33:04] Checking for apptainer binary...
[2026-01-10 22:33:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 22:33:04] Running /usr/bin/apptainer --version
[2026-01-10 22:33:04] apptainer version 1.4.5-2.el9
[2026-01-10 22:33:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 22:33:05] c7-10-12.aglt2.org
[2026-01-10 22:33:05] apptainer works
[2026-01-10 22:33:05] Set ATHENA_PROC_NUMBER=9
[2026-01-10 22:33:05] Set ATHENA_CORE_NUMBER=9
[2026-01-10 22:33:05] Starting ATLAS job with PandaID=6965941555
[2026-01-10 22:33:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 02:01:25]  *** The last 200 lines of the pilot log: ***
[2026-01-11 02:01:25] 2026-01-11 07:00:46,526 | WARNING  | process 1614636 can no longer be monitored (due to stat problems) - aborting
[2026-01-11 02:01:25] 2026-01-11 07:00:46,526 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965941555/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 02:01:25] 2026-01-11 07:00:46,957 | INFO     | number of running child processes to parent process 1614636: 1
[2026-01-11 02:01:25] 2026-01-11 07:00:46,957 | INFO     | maximum number of monitored processes: 6
[2026-01-11 02:01:25] 2026-01-11 07:00:47,339 | INFO     | time since job start (12424s) is within the limit (349056.0s)
[2026-01-11 02:01:25] 2026-01-11 07:00:49,346 | INFO     | time since job start (12426s) is within the limit (349056.0s)
[2026-01-11 02:01:25] 2026-01-11 07:00:49,463 | INFO     | monitor loop #840: job 0:6965941555 is in state 'finished'
[2026-01-11 02:01:25] 2026-01-11 07:00:49,464 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 02:01:25] 2026-01-11 07:00:51,353 | INFO     | time since job start (12428s) is within the limit (349056.0s)
[2026-01-11 02:01:25] 2026-01-11 07:00:51,555 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 02:01:25] 2026-01-11 07:00:51,561 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3232.163234375
[2026-01-11 02:01:25] 2026-01-11 07:00:51,570 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965941555/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 02:01:25] 2026-01-11 07:00:51,571 | INFO     | extracted standard info from prmon json
[2026-01-11 02:01:25] 2026-01-11 07:00:51,571 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 02:01:25] 2026-01-11 07:00:51,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 02:01:25] 2026-01-11 07:00:51,571 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 02:01:25] 2026-01-11 07:00:51,571 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 02:01:25] 2026-01-11 07:00:51,574 | INFO     | fitting pss+swap vs Time
[2026-01-11 02:01:25] 2026-01-11 07:00:51,574 | INFO     | sum of square deviations: 2593809141.241394
[2026-01-11 02:01:25] 2026-01-11 07:00:51,575 | INFO     | sum of deviations: 8723279626.37931
[2026-01-11 02:01:25] 2026-01-11 07:00:51,575 | INFO     | mean x: 1768108621.413793
[2026-01-11 02:01:25] 2026-01-11 07:00:51,575 | INFO     | mean y: 2638107.2216748768
[2026-01-11 02:01:25] 2026-01-11 07:00:51,576 | INFO     | intersect: -5943715334.582753
[2026-01-11 02:01:25] 2026-01-11 07:00:51,576 | INFO     | chi2: 1.2527338941910842
[2026-01-11 02:01:25] 2026-01-11 07:00:51,576 | INFO     | sum of square deviations: 2406845207.8636384
[2026-01-11 02:01:25] 2026-01-11 07:00:51,577 | INFO     | sum of deviations: 7823623680.499973
[2026-01-11 02:01:25] 2026-01-11 07:00:51,577 | INFO     | mean x: 1768108468.9242425
[2026-01-11 02:01:25] 2026-01-11 07:00:51,577 | INFO     | mean y: 2637373.5
[2026-01-11 02:01:25] 2026-01-11 07:00:51,577 | INFO     | intersect: -5744726537.5538
[2026-01-11 02:01:25] 2026-01-11 07:00:51,578 | INFO     | chi2: 1.2522617517980696
[2026-01-11 02:01:25] 2026-01-11 07:00:51,578 | INFO     | current chi2=1.2522617517980696 (change=0.03768896133519166 %)
[2026-01-11 02:01:25] 2026-01-11 07:00:51,578 | INFO     | right removable region: 197
[2026-01-11 02:01:25] 2026-01-11 07:00:51,578 | INFO     | sum of square deviations: 2406806106.707081
[2026-01-11 02:01:25] 2026-01-11 07:00:51,579 | INFO     | sum of deviations: -18485895563.464645
[2026-01-11 02:01:25] 2026-01-11 07:00:51,579 | INFO     | mean x: 1768108773.9191918
[2026-01-11 02:01:25] 2026-01-11 07:00:51,579 | INFO     | mean y: 2660041.595959596
[2026-01-11 02:01:25] 2026-01-11 07:00:51,579 | INFO     | intersect: 13582928950.01851
[2026-01-11 02:01:25] 2026-01-11 07:00:51,579 | INFO     | chi2: 0.07711225585922969
[2026-01-11 02:01:25] 2026-01-11 07:00:51,580 | INFO     | current chi2=0.07711225585922969 (change=93.84448235840041 %)
[2026-01-11 02:01:25] 2026-01-11 07:00:51,580 | INFO     | sum of square deviations: 2229072810.279798
[2026-01-11 02:01:25] 2026-01-11 07:00:51,581 | INFO     | sum of deviations: -16857834043.373049
[2026-01-11 02:01:25] 2026-01-11 07:00:51,581 | INFO     | mean x: 1768108926.3989637
[2026-01-11 02:01:25] 2026-01-11 07:00:51,581 | INFO     | mean y: 2658639.134715026
[2026-01-11 02:01:25] 2026-01-11 07:00:51,581 | INFO     | intersect: 13374355927.075186
[2026-01-11 02:01:25] 2026-01-11 07:00:51,581 | INFO     | chi2: 0.07690634198852944
[2026-01-11 02:01:25] 2026-01-11 07:00:51,581 | INFO     | current chi2=0.07690634198852944 (change=0.26703131480960796 %)
[2026-01-11 02:01:25] 2026-01-11 07:00:51,581 | INFO     | left removable region: 20
[2026-01-11 02:01:25] 2026-01-11 07:00:51,582 | INFO     | sum of square deviations: 1719438051.3898327
[2026-01-11 02:01:25] 2026-01-11 07:00:51,582 | INFO     | sum of deviations: -10889907978.20339
[2026-01-11 02:01:25] 2026-01-11 07:00:51,583 | INFO     | mean x: 1768109048.3728814
[2026-01-11 02:01:25] 2026-01-11 07:00:51,583 | INFO     | mean y: 2652143.4576271186
[2026-01-11 02:01:25] 2026-01-11 07:00:51,583 | INFO     | intersect: 11200813552.439981
[2026-01-11 02:01:25] 2026-01-11 07:00:51,583 | INFO     | chi2: 0.06703880180634002
[2026-01-11 02:01:25] 2026-01-11 07:00:51,583 | INFO     | current memory leak: -6.33 B/s (using 177 data points, chi2=0.07)
[2026-01-11 02:01:25] 2026-01-11 07:00:51,583 | INFO     | could have reported an average CPU frequency of 3242 MHz (10 samples)
[2026-01-11 02:01:25] 2026-01-11 07:00:51,583 | INFO     | ..............................
[2026-01-11 02:01:25] 2026-01-11 07:00:51,583 | INFO     | . Timing measurements:
[2026-01-11 02:01:25] 2026-01-11 07:00:51,583 | INFO     | . get job = 0 s
[2026-01-11 02:01:25] 2026-01-11 07:00:51,584 | INFO     | . initial setup = 3 s
[2026-01-11 02:01:25] 2026-01-11 07:00:51,584 | INFO     | . payload setup = 9 s
[2026-01-11 02:01:25] 2026-01-11 07:00:51,584 | INFO     | . stage-in = 0 s
[2026-01-11 02:01:25] 2026-01-11 07:00:51,584 | INFO     | . payload execution = 12384 s
[2026-01-11 02:01:25] 2026-01-11 07:00:51,584 | INFO     | . stage-out = 2 s
[2026-01-11 02:01:25] 2026-01-11 07:00:51,584 | INFO     | . log creation = 0 s
[2026-01-11 02:01:25] 2026-01-11 07:00:51,584 | INFO     | ..............................
[2026-01-11 02:01:25] 2026-01-11 07:00:51,678 | INFO     | 
[2026-01-11 02:01:25] 2026-01-11 07:00:51,679 | INFO     | job summary report
[2026-01-11 02:01:25] 2026-01-11 07:00:51,679 | INFO     | --------------------------------------------------
[2026-01-11 02:01:25] 2026-01-11 07:00:51,679 | INFO     | PanDA job id: 6965941555
[2026-01-11 02:01:25] 2026-01-11 07:00:51,679 | INFO     | task id: 48039250
[2026-01-11 02:01:25] 2026-01-11 07:00:51,679 | INFO     | errors: (none)
[2026-01-11 02:01:25] 2026-01-11 07:00:51,679 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 02:01:25] 2026-01-11 07:00:51,679 | INFO     | pilot state: finished 
[2026-01-11 02:01:25] 2026-01-11 07:00:51,679 | INFO     | transexitcode: 0
[2026-01-11 02:01:25] 2026-01-11 07:00:51,679 | INFO     | exeerrorcode: 0
[2026-01-11 02:01:25] 2026-01-11 07:00:51,679 | INFO     | exeerrordiag: 
[2026-01-11 02:01:25] 2026-01-11 07:00:51,679 | INFO     | exitcode: 0
[2026-01-11 02:01:25] 2026-01-11 07:00:51,679 | INFO     | exitmsg: OK
[2026-01-11 02:01:25] 2026-01-11 07:00:51,680 | INFO     | cpuconsumptiontime: 45826 s
[2026-01-11 02:01:25] 2026-01-11 07:00:51,680 | INFO     | nevents: 400
[2026-01-11 02:01:25] 2026-01-11 07:00:51,680 | INFO     | neventsw: 0
[2026-01-11 02:01:25] 2026-01-11 07:00:51,680 | INFO     | pid: 1614636
[2026-01-11 02:01:25] 2026-01-11 07:00:51,680 | INFO     | pgrp: 1614636
[2026-01-11 02:01:25] 2026-01-11 07:00:51,680 | INFO     | corecount: 9
[2026-01-11 02:01:25] 2026-01-11 07:00:51,680 | INFO     | event service: False
[2026-01-11 02:01:25] 2026-01-11 07:00:51,680 | INFO     | sizes: {0: 2284026, 9: 2284288, 11: 2284316, 12398: 2314565, 12400: 2323619, 12409: 2323757}
[2026-01-11 02:01:25] 2026-01-11 07:00:51,680 | INFO     | --------------------------------------------------
[2026-01-11 02:01:25] 2026-01-11 07:00:51,680 | INFO     | 
[2026-01-11 02:01:25] 2026-01-11 07:00:51,680 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-11 02:01:25] 2026-01-11 07:00:51,713 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 02:01:25] 2026-01-11 07:00:51,713 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 02:01:25] 2026-01-11 07:00:51,713 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 02:01:25] 2026-01-11 07:00:51,713 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 02:01:25] 2026-01-11 07:00:51,713 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 02:01:25] 2026-01-11 07:00:51,713 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 02:01:25] 2026-01-11 07:00:51,714 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 02:01:25] 2026-01-11 07:00:51,714 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 02:01:25] 2026-01-11 07:00:51,714 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 02:01:25] 2026-01-11 07:00:51,714 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 02:01:25] 2026-01-11 07:00:51,714 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 02:01:25] 2026-01-11 07:00:51,714 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 02:01:25] 2026-01-11 07:00:51,714 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 02:01:25] 2026-01-11 07:00:51,714 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 02:01:25] 2026-01-11 07:00:51,714 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 02:01:25] 2026-01-11 07:00:51,714 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 02:01:25] 2026-01-11 07:00:51,714 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 02:01:25] 2026-01-11 07:00:51,714 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 02:01:25] 2026-01-11 07:00:51,715 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 02:01:25] 2026-01-11 07:00:51,715 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 02:01:25] 2026-01-11 07:00:51,715 | INFO     | job 6965941555 has completed (purged errors)
[2026-01-11 02:01:25] 2026-01-11 07:00:51,715 | INFO     | overall cleanup function is called
[2026-01-11 02:01:25] 2026-01-11 07:00:52,723 | INFO     | --- collectZombieJob: --- 10, [1614636]
[2026-01-11 02:01:25] 2026-01-11 07:00:52,724 | INFO     | zombie collector waiting for pid 1614636
[2026-01-11 02:01:25] 2026-01-11 07:00:52,724 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 02:01:25] 2026-01-11 07:00:52,724 | INFO     | collected zombie processes
[2026-01-11 02:01:25] 2026-01-11 07:00:52,724 | INFO     | will attempt to kill all subprocesses of pid=1614636
[2026-01-11 02:01:25] 2026-01-11 07:00:53,025 | INFO     | process IDs to be killed: [1614636] (in reverse order)
[2026-01-11 02:01:25] 2026-01-11 07:00:53,121 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 02:01:25] 2026-01-11 07:00:53,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 02:01:25] 2026-01-11 07:00:53,133 | INFO     | did not find any defunct processes belonging to 1614636
[2026-01-11 02:01:25] 2026-01-11 07:00:53,144 | INFO     | did not find any defunct processes belonging to 1614636
[2026-01-11 02:01:25] 2026-01-11 07:00:53,144 | INFO     | ready for new job
[2026-01-11 02:01:25] 2026-01-11 07:00:53,144 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 02:01:25] 2026-01-11 07:00:53,148 | INFO     | ***************************************
[2026-01-11 02:01:25] 2026-01-11 07:00:53,148 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 02:01:25] 2026-01-11 07:00:53,148 | INFO     | ***************************************
[2026-01-11 02:01:25] 2026-01-11 07:00:53,148 | INFO     | 
[2026-01-11 02:01:25] 2026-01-11 07:00:53,157 | INFO     | architecture information:
[2026-01-11 02:01:25] 2026-01-11 07:00:53,161 | INFO     | executing command: cat /etc/os-release
[2026-01-11 02:01:25] 2026-01-11 07:00:53,184 | INFO     | cat /etc/os-release:
[2026-01-11 02:01:25] NAME="CentOS Linux"
[2026-01-11 02:01:25] VERSION="7 (Core)"
[2026-01-11 02:01:25] ID="centos"
[2026-01-11 02:01:25] ID_LIKE="rhel fedora"
[2026-01-11 02:01:25] VERSION_ID="7"
[2026-01-11 02:01:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 02:01:25] ANSI_COLOR="0;31"
[2026-01-11 02:01:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 02:01:25] HOME_URL="https://www.centos.org/"
[2026-01-11 02:01:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 02:01:25] 
[2026-01-11 02:01:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 02:01:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 02:01:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 02:01:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 02:01:25] 
[2026-01-11 02:01:25] 2026-01-11 07:00:53,185 | INFO     | ***************************************
[2026-01-11 02:01:25] 2026-01-11 07:00:53,688 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-11 02:01:25] 2026-01-11 07:00:53,714 | INFO     | sufficient remaining disk space (84999667712 B)
[2026-01-11 02:01:25] 2026-01-11 07:00:53,714 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 02:01:25] 2026-01-11 07:00:53,717 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 02:01:25] 2026-01-11 07:00:53,717 | INFO     | update_server=False
[2026-01-11 02:01:25] 2026-01-11 07:00:53,717 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 02:01:25] 2026-01-11 07:00:53,717 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 02:01:25] 2026-01-11 07:00:53,717 | INFO     | aborting loop
[2026-01-11 02:01:25] 2026-01-11 07:00:53,810 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 02:01:25] 2026-01-11 07:00:53,978 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 02:01:25] 2026-01-11 07:00:54,504 | INFO     | all data control threads have been joined
[2026-01-11 02:01:25] 2026-01-11 07:00:54,723 | INFO     | [job] retrieve thread has finished
[2026-01-11 02:01:25] 2026-01-11 07:00:54,724 | INFO     | [job] job monitor thread has finished
[2026-01-11 02:01:25] 2026-01-11 07:00:54,752 | INFO     | all payload control threads have been joined
[2026-01-11 02:01:25] 2026-01-11 07:00:54,889 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 02:01:25] 2026-01-11 07:00:54,988 | INFO     | all job control threads have been joined
[2026-01-11 02:01:25] 2026-01-11 07:00:55,232 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 02:01:25] 2026-01-11 07:00:55,441 | INFO     | [job] validate thread has finished
[2026-01-11 02:01:25] 2026-01-11 07:00:55,510 | INFO     | [data] control thread has finished
[2026-01-11 02:01:25] 2026-01-11 07:00:55,617 | INFO     | [payload] failed_post thread has finished
[2026-01-11 02:01:25] 2026-01-11 07:00:55,758 | INFO     | [payload] control thread has finished
[2026-01-11 02:01:25] 2026-01-11 07:00:55,817 | INFO     | [data] copytool_out thread has finished
[2026-01-11 02:01:25] 2026-01-11 07:00:55,885 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 02:01:25] 2026-01-11 07:00:55,996 | INFO     | [job] control thread has finished
[2026-01-11 02:01:25] 2026-01-11 07:00:56,111 | INFO     | [data] copytool_in thread has finished
[2026-01-11 02:01:25] 2026-01-11 07:00:56,226 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 02:01:25] 2026-01-11 07:00:56,297 | INFO     | [payload] validate_post thread has finished
[2026-01-11 02:01:25] 2026-01-11 07:00:56,692 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 02:01:25] 2026-01-11 07:00:57,698 | INFO     | [job] queue monitor thread has finished
[2026-01-11 02:01:25] 2026-01-11 07:00:57,990 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 02:01:25] 2026-01-11 07:01:04,635 | INFO     | [monitor] cgroup control has ended
[2026-01-11 02:01:25] 2026-01-11 07:01:06,133 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139745168099136)>', '<ExcThread(monitor, started 139744537208576)>']
[2026-01-11 02:01:25] 2026-01-11 07:01:11,160 | INFO     | all workflow threads have been joined
[2026-01-11 02:01:25] 2026-01-11 07:01:11,160 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 02:01:25] 2026-01-11 07:01:11,161 | INFO     | traces error code: 0
[2026-01-11 02:01:25] 2026-01-11 07:01:11,161 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 02:01:25] 2026-01-11 07:01:24,948 | INFO     | PID=1598307 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 02:01:25] 2026-01-11 07:01:24,954 | INFO     | .. there are 9 such processes running
[2026-01-11 02:01:25] 2026-01-11 07:01:24,955 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 02:01:25] 2026-01-11 07:01:24,955 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 02:01:25] 2026-01-11 07:01:24,955 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 02:01:25] 2026-01-11 07:01:24,955 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 02:01:25] 2026-01-11 07:01:24,955 | INFO     | [monitor] control thread has ended
[2026-01-11 02:01:25] 2026-01-11 07:01:25,127 [wrapper] ==== pilot stdout END ====
[2026-01-11 02:01:25] 2026-01-11 07:01:25,147 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 02:01:25] 2026-01-11 07:01:25,191 [wrapper] pilotpid: 1598307
[2026-01-11 02:01:25] 2026-01-11 07:01:25,219 [wrapper] Pilot exit status: 0
[2026-01-11 02:01:25] 2026-01-11 07:01:25,288 [wrapper] pandaids: 6965941555
[2026-01-11 02:01:25] 2026-01-11 07:01:25,360 [wrapper] cleanup supervisor_pilot 2027205 1598308
[2026-01-11 02:01:25] 2026-01-11 07:01:25,363 [wrapper] Test setup, not cleaning
[2026-01-11 02:01:25] 2026-01-11 07:01:25,365 [wrapper] apfmon messages muted
[2026-01-11 02:01:25] 2026-01-11 07:01:25,372 [wrapper] ==== wrapper stdout END ====
[2026-01-11 02:01:25] 2026-01-11 07:01:25,379 [wrapper] ==== wrapper stderr END ====
[2026-01-11 02:01:25]  *** Error codes and diagnostics ***
[2026-01-11 02:01:25]     "exeErrorCode": 0,
[2026-01-11 02:01:25]     "exeErrorDiag": "",
[2026-01-11 02:01:25]     "pilotErrorCode": 0,
[2026-01-11 02:01:25]     "pilotErrorDiag": "",
[2026-01-11 02:01:25]  *** Listing of results directory ***
[2026-01-11 02:01:25] total 1148556
[2026-01-11 02:01:25] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 22:29 pilot3.tar.gz
[2026-01-11 02:01:25] -rwx------. 1 boincer umatlas     36322 Jan 10 22:30 runpilot2-wrapper.sh
[2026-01-11 02:01:25] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 22:30 queuedata.json
[2026-01-11 02:01:25] -rw-r--r--. 1 boincer umatlas       100 Jan 10 22:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 02:01:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 22:33 run_atlas
[2026-01-11 02:01:25] -rw-r--r--. 1 boincer umatlas       105 Jan 10 22:33 job.xml
[2026-01-11 02:01:25] -rw-r--r--. 2 boincer umatlas 916416990 Jan 10 22:33 EVNT.48039248._000054.pool.root.1
[2026-01-11 02:01:25] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:33 start_atlas.sh
[2026-01-11 02:01:25] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 22:33 shared
[2026-01-11 02:01:25] -rw-r--r--. 2 boincer umatlas    592420 Jan 10 22:33 input.tar.gz
[2026-01-11 02:01:25] -rw-r--r--. 1 boincer umatlas         0 Jan 10 22:33 boinc_lockfile
[2026-01-11 02:01:25] -rw-r--r--. 1 boincer umatlas      2592 Jan 10 22:33 pandaJob.out
[2026-01-11 02:01:25] -rw-------. 1 boincer umatlas        57 Jan 10 22:33 setup.sh.local
[2026-01-11 02:01:25] -rw-------. 1 boincer umatlas    989548 Jan 10 22:33 agis_schedconf.cvmfs.json
[2026-01-11 02:01:25] drwx------. 5 boincer umatlas      4096 Jan 10 22:33 pilot3
[2026-01-11 02:01:25] -rw-r--r--. 1 boincer umatlas      6902 Jan 11 01:58 init_data.xml
[2026-01-11 02:01:25] -rw-------. 1 boincer umatlas 251502744 Jan 11 02:00 HITS.48039250._007023.pool.root.1
[2026-01-11 02:01:25] -rw-r--r--. 1 boincer umatlas       531 Jan 11 02:00 boinc_task_state.xml
[2026-01-11 02:01:25] -rw-------. 1 boincer umatlas      1030 Jan 11 02:00 memory_monitor_summary.json
[2026-01-11 02:01:25] -rw-------. 1 boincer umatlas   1516240 Jan 11 02:00 agis_ddmendpoints.agis.ALL.json
[2026-01-11 02:01:25] -rw-------. 1 boincer umatlas    451879 Jan 11 02:00 log.48039250._007023.job.log.tgz.1
[2026-01-11 02:01:25] -rw-------. 1 boincer umatlas      7771 Jan 11 02:00 heartbeat.json
[2026-01-11 02:01:25] -rw-r--r--. 1 boincer umatlas        28 Jan 11 02:01 wrapper_checkpoint.txt
[2026-01-11 02:01:25] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 02:01 boinc_mmap_file
[2026-01-11 02:01:25] -rw-------. 1 boincer umatlas       822 Jan 11 02:01 pilotlog.txt
[2026-01-11 02:01:25] -rw-------. 1 boincer umatlas        95 Jan 11 02:01 pilot_heartbeat.json
[2026-01-11 02:01:25] -rw-------. 1 boincer umatlas   1691836 Jan 11 02:01 log.48039250._007023.job.log.1
[2026-01-11 02:01:25] -rw-------. 1 boincer umatlas       357 Jan 11 02:01 output.list
[2026-01-11 02:01:25] -rw-r--r--. 1 boincer umatlas       620 Jan 11 02:01 runtime_log
[2026-01-11 02:01:25] -rw-------. 1 boincer umatlas   2160640 Jan 11 02:01 result.tar.gz
[2026-01-11 02:01:25] -rw-r--r--. 1 boincer umatlas      9343 Jan 11 02:01 runtime_log.err
[2026-01-11 02:01:25] -rw-------. 1 boincer umatlas       655 Jan 11 02:01 PCGLDmGL1y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvymKDm5xzCtn.diag
[2026-01-11 02:01:25] -rw-r--r--. 1 boincer umatlas     19934 Jan 11 02:01 stderr.txt
[2026-01-11 02:01:25] HITS file was successfully produced:
[2026-01-11 02:01:25] -rw-------. 1 boincer umatlas 251502744 Jan 11 02:00 shared/HITS.pool.root.1
[2026-01-11 02:01:25]  *** Contents of shared directory: ***
[2026-01-11 02:01:25] total 1143268
[2026-01-11 02:01:25] -rw-r--r--. 2 boincer umatlas 916416990 Jan 10 22:33 ATLAS.root_0
[2026-01-11 02:01:25] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 22:33 start_atlas.sh
[2026-01-11 02:01:25] -rw-r--r--. 2 boincer umatlas    592420 Jan 10 22:33 input.tar.gz
[2026-01-11 02:01:25] -rw-------. 1 boincer umatlas 251502744 Jan 11 02:00 HITS.pool.root.1
[2026-01-11 02:01:25] -rw-------. 1 boincer umatlas   2160640 Jan 11 02:01 result.tar.gz
02:01:26 (1590051): run_atlas exited; CPU time 45949.850983
02:01:26 (1590051): called boinc_finish(0)

</stderr_txt>
]]>

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