Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:02:06 (25486): wrapper (7.7.26015): starting
04:02:06 (25486): wrapper: running run_atlas (--nthreads 8)
[2026-01-11 04:02:06] Arguments: --nthreads 8
[2026-01-11 04:02:06] Threads: 8
[2026-01-11 04:02:06] Checking for CVMFS
[2026-01-11 04:02:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 04:02:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 04:02:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 04:02:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 04:02:09] 2.11.2.0 28634 37728 100340 155000 3 11 16500639 25165824 899 130560 0 8420815 99.688 10411185 2571 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-11 04:02:09] CVMFS is ok
[2026-01-11 04:02:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 04:02:09] Checking for apptainer binary...
[2026-01-11 04:02:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 04:02:09] Running /usr/bin/apptainer --version
[2026-01-11 04:02:09] apptainer version 1.3.2-1.el7
[2026-01-11 04:02:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 04:02:26] cg-vwn465.simple-grid.lan
[2026-01-11 04:02:26] apptainer works
[2026-01-11 04:02:26] Set ATHENA_PROC_NUMBER=8
[2026-01-11 04:02:26] Set ATHENA_CORE_NUMBER=8
[2026-01-11 04:02:26] Starting ATLAS job with PandaID=6963146943
[2026-01-11 04:02:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 09:14:24]  *** The last 200 lines of the pilot log: ***
[2026-01-11 09:14:24] 2026-01-11 08:13:16,494 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-11 09:14:24] 2026-01-11 08:13:16,496 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963146943/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 09:14:24] 2026-01-11 08:13:16,497 | INFO     | extracted standard info from prmon json
[2026-01-11 09:14:24] 2026-01-11 08:13:16,497 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 09:14:24] 2026-01-11 08:13:16,497 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 09:14:24] 2026-01-11 08:13:16,497 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 09:14:24] 2026-01-11 08:13:16,497 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 09:14:24] 2026-01-11 08:13:16,503 | INFO     | fitting pss+swap vs Time
[2026-01-11 09:14:24] 2026-01-11 08:13:16,513 | INFO     | sum of square deviations: 7673415648.582747
[2026-01-11 09:14:24] 2026-01-11 08:13:16,515 | INFO     | sum of deviations: 98335959725.12405
[2026-01-11 09:14:24] 2026-01-11 08:13:16,516 | INFO     | mean x: 1768110199.762069
[2026-01-11 09:14:24] 2026-01-11 08:13:16,516 | INFO     | mean y: 2444286.393103448
[2026-01-11 09:14:24] 2026-01-11 08:13:16,516 | INFO     | intersect: -22656150185.22226
[2026-01-11 09:14:24] 2026-01-11 08:13:16,516 | INFO     | chi2: 10.504359582038957
[2026-01-11 09:14:24] 2026-01-11 08:13:16,517 | INFO     | sum of square deviations: 7283828745.312283
[2026-01-11 09:14:24] 2026-01-11 08:13:16,519 | INFO     | sum of deviations: 138006524892.5474
[2026-01-11 09:14:24] 2026-01-11 08:13:16,520 | INFO     | mean x: 1768110046.2491229
[2026-01-11 09:14:24] 2026-01-11 08:13:16,520 | INFO     | mean y: 2459745.1894736844
[2026-01-11 09:14:24] 2026-01-11 08:13:16,520 | INFO     | intersect: -33497878008.83623
[2026-01-11 09:14:24] 2026-01-11 08:13:16,520 | INFO     | chi2: 8.868511599232676
[2026-01-11 09:14:24] 2026-01-11 08:13:16,520 | INFO     | current chi2=8.868511599232676 (change=15.573038699126037 %)
[2026-01-11 09:14:24] 2026-01-11 08:13:16,521 | INFO     | right removable region: 284
[2026-01-11 09:14:24] 2026-01-11 08:13:16,521 | INFO     | sum of square deviations: 7285916173.663175
[2026-01-11 09:14:24] 2026-01-11 08:13:16,524 | INFO     | sum of deviations: -4230166531.1999626
[2026-01-11 09:14:24] 2026-01-11 08:13:16,524 | INFO     | mean x: 1768110352.863158
[2026-01-11 09:14:24] 2026-01-11 08:13:16,524 | INFO     | mean y: 2484790.533333333
[2026-01-11 09:14:24] 2026-01-11 08:13:16,524 | INFO     | intersect: 1029040828.2195908
[2026-01-11 09:14:24] 2026-01-11 08:13:16,524 | INFO     | chi2: 5.405277881522619
[2026-01-11 09:14:24] 2026-01-11 08:13:16,525 | INFO     | current chi2=5.405277881522619 (change=48.542528087434114 %)
[2026-01-11 09:14:24] 2026-01-11 08:13:16,525 | INFO     | sum of square deviations: 6911672547.942866
[2026-01-11 09:14:24] 2026-01-11 08:13:16,528 | INFO     | sum of deviations: -84996740456.37143
[2026-01-11 09:14:24] 2026-01-11 08:13:16,528 | INFO     | mean x: 1768110505.9857142
[2026-01-11 09:14:24] 2026-01-11 08:13:16,528 | INFO     | mean y: 2517808.407142857
[2026-01-11 09:14:24] 2026-01-11 08:13:16,528 | INFO     | intersect: 21745971181.379868
[2026-01-11 09:14:24] 2026-01-11 08:13:16,528 | INFO     | chi2: 2.44045980031701
[2026-01-11 09:14:24] 2026-01-11 08:13:16,529 | INFO     | current chi2=2.44045980031701 (change=54.8504285291332 %)
[2026-01-11 09:14:24] 2026-01-11 08:13:16,529 | INFO     | sum of square deviations: 6550452197.287245
[2026-01-11 09:14:24] 2026-01-11 08:13:16,531 | INFO     | sum of deviations: -105318036370.56004
[2026-01-11 09:14:24] 2026-01-11 08:13:16,532 | INFO     | mean x: 1768110659.1309092
[2026-01-11 09:14:24] 2026-01-11 08:13:16,532 | INFO     | mean y: 2526352.96
[2026-01-11 09:14:24] 2026-01-11 08:13:16,532 | INFO     | intersect: 28430173345.42889
[2026-01-11 09:14:24] 2026-01-11 08:13:16,532 | INFO     | chi2: 2.074366138668702
[2026-01-11 09:14:24] 2026-01-11 08:13:16,532 | INFO     | current chi2=2.074366138668702 (change=15.001011760191815 %)
[2026-01-11 09:14:24] 2026-01-11 08:13:16,532 | INFO     | left removable region: 30
[2026-01-11 09:14:24] 2026-01-11 08:13:16,533 | INFO     | sum of square deviations: 5168801752.72833
[2026-01-11 09:14:24] 2026-01-11 08:13:16,535 | INFO     | sum of deviations: -46624655939.73228
[2026-01-11 09:14:24] 2026-01-11 08:13:16,535 | INFO     | mean x: 1768110934.444882
[2026-01-11 09:14:24] 2026-01-11 08:13:16,535 | INFO     | mean y: 2535890.590551181
[2026-01-11 09:14:24] 2026-01-11 08:13:16,535 | INFO     | intersect: 15951602603.829617
[2026-01-11 09:14:24] 2026-01-11 08:13:16,536 | INFO     | chi2: 0.20339828416517197
[2026-01-11 09:14:24] 2026-01-11 08:13:16,536 | INFO     | current memory leak: -9.02 B/s (using 254 data points, chi2=0.20)
[2026-01-11 09:14:24] 2026-01-11 08:13:16,537 | INFO     | could have reported an average CPU frequency of 2250 MHz (13 samples)
[2026-01-11 09:14:24] 2026-01-11 08:13:16,537 | INFO     | ..............................
[2026-01-11 09:14:24] 2026-01-11 08:13:16,537 | INFO     | . Timing measurements:
[2026-01-11 09:14:24] 2026-01-11 08:13:16,537 | INFO     | . get job = 0 s
[2026-01-11 09:14:24] 2026-01-11 08:13:16,537 | INFO     | . initial setup = 12 s
[2026-01-11 09:14:24] 2026-01-11 08:13:16,537 | INFO     | . payload setup = 151 s
[2026-01-11 09:14:24] 2026-01-11 08:13:16,537 | INFO     | . stage-in = 0 s
[2026-01-11 09:14:24] 2026-01-11 08:13:16,538 | INFO     | . payload execution = 17904 s
[2026-01-11 09:14:24] 2026-01-11 08:13:16,538 | INFO     | . stage-out = 4 s
[2026-01-11 09:14:24] 2026-01-11 08:13:16,538 | INFO     | . log creation = 1 s
[2026-01-11 09:14:24] 2026-01-11 08:13:16,538 | INFO     | ..............................
[2026-01-11 09:14:24] 2026-01-11 08:13:16,664 | INFO     | 
[2026-01-11 09:14:24] 2026-01-11 08:13:16,665 | INFO     | job summary report
[2026-01-11 09:14:24] 2026-01-11 08:13:16,665 | INFO     | --------------------------------------------------
[2026-01-11 09:14:24] 2026-01-11 08:13:16,665 | INFO     | PanDA job id: 6963146943
[2026-01-11 09:14:24] 2026-01-11 08:13:16,665 | INFO     | task id: 47898826
[2026-01-11 09:14:24] 2026-01-11 08:13:16,665 | INFO     | errors: (none)
[2026-01-11 09:14:24] 2026-01-11 08:13:16,665 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 09:14:24] 2026-01-11 08:13:16,665 | INFO     | pilot state: finished 
[2026-01-11 09:14:24] 2026-01-11 08:13:16,665 | INFO     | transexitcode: 0
[2026-01-11 09:14:24] 2026-01-11 08:13:16,666 | INFO     | exeerrorcode: 0
[2026-01-11 09:14:24] 2026-01-11 08:13:16,666 | INFO     | exeerrordiag: 
[2026-01-11 09:14:24] 2026-01-11 08:13:16,666 | INFO     | exitcode: 0
[2026-01-11 09:14:24] 2026-01-11 08:13:16,666 | INFO     | exitmsg: OK
[2026-01-11 09:14:24] 2026-01-11 08:13:16,666 | INFO     | cpuconsumptiontime: 73051 s
[2026-01-11 09:14:24] 2026-01-11 08:13:16,666 | INFO     | nevents: 400
[2026-01-11 09:14:24] 2026-01-11 08:13:16,666 | INFO     | neventsw: 0
[2026-01-11 09:14:24] 2026-01-11 08:13:16,666 | INFO     | pid: 3572
[2026-01-11 09:14:24] 2026-01-11 08:13:16,666 | INFO     | pgrp: 3572
[2026-01-11 09:14:24] 2026-01-11 08:13:16,666 | INFO     | corecount: 8
[2026-01-11 09:14:24] 2026-01-11 08:13:16,667 | INFO     | event service: False
[2026-01-11 09:14:24] 2026-01-11 08:13:16,667 | INFO     | sizes: {0: 2283743, 1: 2283998, 2: 2283998, 12: 2284026, 23: 2284054, 34: 2284082, 44: 2284238, 55: 2284266, 66: 2284294, 77: 2284322, 87: 2284378, 98: 2284976, 10
[2026-01-11 09:14:24] 2026-01-11 08:13:16,667 | INFO     | --------------------------------------------------
[2026-01-11 09:14:24] 2026-01-11 08:13:16,667 | INFO     | 
[2026-01-11 09:14:24] 2026-01-11 08:13:16,667 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-11 09:14:24] 2026-01-11 08:13:17,185 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 09:14:24] 2026-01-11 08:13:17,185 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 09:14:24] 2026-01-11 08:13:17,186 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 09:14:24] 2026-01-11 08:13:17,186 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 09:14:24] 2026-01-11 08:13:17,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 09:14:24] 2026-01-11 08:13:17,186 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 09:14:24] 2026-01-11 08:13:17,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 09:14:24] 2026-01-11 08:13:17,186 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 09:14:24] 2026-01-11 08:13:17,186 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 09:14:24] 2026-01-11 08:13:17,186 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 09:14:24] 2026-01-11 08:13:17,186 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 09:14:24] 2026-01-11 08:13:17,186 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 09:14:24] 2026-01-11 08:13:17,187 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 09:14:24] 2026-01-11 08:13:17,187 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 09:14:24] 2026-01-11 08:13:17,187 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 09:14:24] 2026-01-11 08:13:17,187 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 09:14:24] 2026-01-11 08:13:17,187 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 09:14:24] 2026-01-11 08:13:17,187 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 09:14:24] 2026-01-11 08:13:17,187 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 09:14:24] 2026-01-11 08:13:17,187 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 09:14:24] 2026-01-11 08:13:17,187 | INFO     | job 6963146943 has completed (purged errors)
[2026-01-11 09:14:24] 2026-01-11 08:13:17,188 | INFO     | overall cleanup function is called
[2026-01-11 09:14:24] 2026-01-11 08:13:18,197 | INFO     | --- collectZombieJob: --- 10, [3572]
[2026-01-11 09:14:24] 2026-01-11 08:13:18,197 | INFO     | zombie collector waiting for pid 3572
[2026-01-11 09:14:24] 2026-01-11 08:13:18,197 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 09:14:24] 2026-01-11 08:13:18,197 | INFO     | collected zombie processes
[2026-01-11 09:14:24] 2026-01-11 08:13:18,197 | INFO     | will attempt to kill all subprocesses of pid=3572
[2026-01-11 09:14:24] 2026-01-11 08:13:18,275 | INFO     | process IDs to be killed: [3572] (in reverse order)
[2026-01-11 09:14:24] 2026-01-11 08:13:19,162 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 09:14:24] 2026-01-11 08:13:19,163 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 09:14:24] 2026-01-11 08:13:19,165 | INFO     | did not find any defunct processes belonging to 3572
[2026-01-11 09:14:24] 2026-01-11 08:13:19,166 | INFO     | did not find any defunct processes belonging to 3572
[2026-01-11 09:14:24] 2026-01-11 08:13:19,167 | INFO     | ready for new job
[2026-01-11 09:14:24] 2026-01-11 08:13:19,167 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 09:14:24] 2026-01-11 08:13:19,169 | INFO     | ***************************************
[2026-01-11 09:14:24] 2026-01-11 08:13:19,169 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 09:14:24] 2026-01-11 08:13:19,169 | INFO     | ***************************************
[2026-01-11 09:14:24] 2026-01-11 08:13:19,169 | INFO     | 
[2026-01-11 09:14:24] 2026-01-11 08:13:19,170 | INFO     | pilot is running in a VM
[2026-01-11 09:14:24] 2026-01-11 08:13:19,170 | INFO     | architecture information:
[2026-01-11 09:14:24] 2026-01-11 08:13:19,175 | INFO     | executing command: cat /etc/os-release
[2026-01-11 09:14:24] 2026-01-11 08:13:19,479 | INFO     | cat /etc/os-release:
[2026-01-11 09:14:24] NAME="CentOS Linux"
[2026-01-11 09:14:24] VERSION="7 (Core)"
[2026-01-11 09:14:24] ID="centos"
[2026-01-11 09:14:24] ID_LIKE="rhel fedora"
[2026-01-11 09:14:24] VERSION_ID="7"
[2026-01-11 09:14:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 09:14:24] ANSI_COLOR="0;31"
[2026-01-11 09:14:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 09:14:24] HOME_URL="https://www.centos.org/"
[2026-01-11 09:14:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 09:14:24] 
[2026-01-11 09:14:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 09:14:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 09:14:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 09:14:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 09:14:24] 
[2026-01-11 09:14:24] 2026-01-11 08:13:19,479 | INFO     | ***************************************
[2026-01-11 09:14:24] 2026-01-11 08:13:19,983 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-11 09:14:24] 2026-01-11 08:13:20,250 | INFO     | sufficient remaining disk space (498041094144 B)
[2026-01-11 09:14:24] 2026-01-11 08:13:20,251 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 09:14:24] 2026-01-11 08:13:20,251 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 09:14:24] 2026-01-11 08:13:20,251 | INFO     | update_server=False
[2026-01-11 09:14:24] 2026-01-11 08:13:20,251 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 09:14:24] 2026-01-11 08:13:20,254 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 09:14:24] 2026-01-11 08:13:20,615 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 09:14:24] 2026-01-11 08:13:20,615 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 09:14:24] 2026-01-11 08:13:20,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 09:14:24] 2026-01-11 08:13:20,615 | INFO     | will abort loop
[2026-01-11 09:14:24] 2026-01-11 08:13:20,704 | INFO     | all payload control threads have been joined
[2026-01-11 09:14:24] 2026-01-11 08:13:21,134 | INFO     | all data control threads have been joined
[2026-01-11 09:14:24] 2026-01-11 08:13:21,257 | INFO     | [job] retrieve thread has finished
[2026-01-11 09:14:24] 2026-01-11 08:13:21,376 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 09:14:24] 2026-01-11 08:13:21,420 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 09:14:24] 2026-01-11 08:13:21,451 | INFO     | all job control threads have been joined
[2026-01-11 09:14:24] 2026-01-11 08:13:21,579 | INFO     | [data] copytool_in thread has finished
[2026-01-11 09:14:24] 2026-01-11 08:13:21,621 | INFO     | [job] job monitor thread has finished
[2026-01-11 09:14:24] 2026-01-11 08:13:21,677 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 09:14:24] 2026-01-11 08:13:21,710 | INFO     | [payload] control thread has finished
[2026-01-11 09:14:24] 2026-01-11 08:13:21,818 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 09:14:24] 2026-01-11 08:13:21,860 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 09:14:24] 2026-01-11 08:13:22,140 | INFO     | [data] control thread has finished
[2026-01-11 09:14:24] 2026-01-11 08:13:22,199 | INFO     | [job] validate thread has finished
[2026-01-11 09:14:24] 2026-01-11 08:13:22,282 | INFO     | [payload] failed_post thread has finished
[2026-01-11 09:14:24] 2026-01-11 08:13:22,456 | INFO     | [job] control thread has finished
[2026-01-11 09:14:24] 2026-01-11 08:13:22,683 | INFO     | [job] queue monitor thread has finished
[2026-01-11 09:14:24] 2026-01-11 08:13:22,695 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 09:14:24] 2026-01-11 08:13:22,714 | INFO     | [payload] validate_post thread has finished
[2026-01-11 09:14:24] 2026-01-11 08:13:23,383 | INFO     | [data] copytool_out thread has finished
[2026-01-11 09:14:24] 2026-01-11 08:13:24,263 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 09:14:24] 2026-01-11 08:13:49,563 | INFO     | PID=29478 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 09:14:24] 2026-01-11 08:13:49,564 | INFO     | .. there are 2 such processes running
[2026-01-11 09:14:24] 2026-01-11 08:13:49,564 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 09:14:24] 2026-01-11 08:13:49,565 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 09:14:24] 2026-01-11 08:13:49,565 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 09:14:24] 2026-01-11 08:14:12,901 | INFO     | [monitor] cgroup control has ended
[2026-01-11 09:14:24] 2026-01-11 08:14:14,170 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140598494926656)>', '<ExcThread(monitor, started 140598187104000)>']
[2026-01-11 09:14:24] 2026-01-11 08:14:14,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 09:14:24] 2026-01-11 08:14:14,715 | INFO     | [monitor] control thread has ended
[2026-01-11 09:14:24] 2026-01-11 08:14:19,196 | INFO     | all workflow threads have been joined
[2026-01-11 09:14:24] 2026-01-11 08:14:19,196 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 09:14:24] 2026-01-11 08:14:19,196 | INFO     | traces error code: 0
[2026-01-11 09:14:24] 2026-01-11 08:14:19,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 09:14:24] 2026-01-11 08:14:19,661 [wrapper] ==== pilot stdout END ====
[2026-01-11 09:14:24] 2026-01-11 08:14:19,758 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 09:14:24] 2026-01-11 08:14:19,853 [wrapper] pilotpid: 29478
[2026-01-11 09:14:24] 2026-01-11 08:14:19,935 [wrapper] Pilot exit status: 0
[2026-01-11 09:14:24] 2026-01-11 08:14:20,440 [wrapper] pandaids: 6963146943
[2026-01-11 09:14:24] 2026-01-11 08:14:21,448 [wrapper] cleanup supervisor_pilot 15306 29479
[2026-01-11 09:14:24] 2026-01-11 08:14:21,524 [wrapper] Test setup, not cleaning
[2026-01-11 09:14:24] 2026-01-11 08:14:21,617 [wrapper] apfmon messages muted
[2026-01-11 09:14:24] 2026-01-11 08:14:21,742 [wrapper] ==== wrapper stdout END ====
[2026-01-11 09:14:24] 2026-01-11 08:14:21,847 [wrapper] ==== wrapper stderr END ====
[2026-01-11 09:14:24]  *** Error codes and diagnostics ***
[2026-01-11 09:14:24]     "exeErrorCode": 0,
[2026-01-11 09:14:24]     "exeErrorDiag": "",
[2026-01-11 09:14:24]     "pilotErrorCode": 0,
[2026-01-11 09:14:24]     "pilotErrorDiag": "",
[2026-01-11 09:14:24]  *** Listing of results directory ***
[2026-01-11 09:14:24] total 447480
[2026-01-11 09:14:24] -rw-r--r--. 1 boinc boinc    579449 Jan  8 16:02 pilot3.tar.gz
[2026-01-11 09:14:24] -rwx------. 1 boinc boinc     36322 Jan  8 16:06 runpilot2-wrapper.sh
[2026-01-11 09:14:24] -rw-r--r--. 1 boinc boinc      5112 Jan  8 16:07 queuedata.json
[2026-01-11 09:14:24] -rw-r--r--. 1 boinc boinc       100 Jan 11 04:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 09:14:24] -rwxr-xr-x. 1 boinc boinc      7986 Jan 11 04:02 run_atlas
[2026-01-11 09:14:24] -rw-r--r--. 1 boinc boinc       105 Jan 11 04:02 job.xml
[2026-01-11 09:14:24] -rw-r--r--. 1 boinc boinc      6391 Jan 11 04:02 init_data.xml
[2026-01-11 09:14:24] -rw-r--r--. 2 boinc boinc 226149076 Jan 11 04:02 EVNT.47898824._001074.pool.root.1
[2026-01-11 09:14:24] -rw-r--r--. 2 boinc boinc     15847 Jan 11 04:02 start_atlas.sh
[2026-01-11 09:14:24] drwxrwx--x. 2 boinc boinc        68 Jan 11 04:02 shared
[2026-01-11 09:14:24] -rw-r--r--. 2 boinc boinc    592398 Jan 11 04:02 input.tar.gz
[2026-01-11 09:14:24] -rw-r--r--. 1 boinc boinc         0 Jan 11 04:02 boinc_lockfile
[2026-01-11 09:14:24] -rw-r--r--. 1 boinc boinc      2519 Jan 11 04:02 pandaJob.out
[2026-01-11 09:14:24] -rw-------. 1 boinc boinc    989548 Jan 11 04:06 agis_schedconf.cvmfs.json
[2026-01-11 09:14:24] drwx------. 5 boinc boinc      4096 Jan 11 04:06 pilot3
[2026-01-11 09:14:24] -rw-------. 1 boinc boinc 222275681 Jan 11 09:09 HITS.47898826._027246.pool.root.1
[2026-01-11 09:14:24] -rw-r--r--. 1 boinc boinc       531 Jan 11 09:10 boinc_task_state.xml
[2026-01-11 09:14:24] -rw-------. 1 boinc boinc      1022 Jan 11 09:11 memory_monitor_summary.json
[2026-01-11 09:14:24] -rw-------. 1 boinc boinc   1516240 Jan 11 09:11 agis_ddmendpoints.agis.ALL.json
[2026-01-11 09:14:24] -rw-------. 1 boinc boinc    519426 Jan 11 09:11 log.47898826._027246.job.log.tgz.1
[2026-01-11 09:14:24] -rw-------. 1 boinc boinc      7785 Jan 11 09:13 heartbeat.json
[2026-01-11 09:14:24] -rw-------. 1 boinc boinc        96 Jan 11 09:13 pilot_heartbeat.json
[2026-01-11 09:14:24] -rw-r--r--. 1 boinc boinc      8192 Jan 11 09:14 boinc_mmap_file
[2026-01-11 09:14:24] -rw-r--r--. 1 boinc boinc        28 Jan 11 09:14 wrapper_checkpoint.txt
[2026-01-11 09:14:24] -rw-------. 1 boinc boinc      5070 Jan 11 09:14 pilotlog.txt
[2026-01-11 09:14:24] -rw-------. 1 boinc boinc   2426780 Jan 11 09:14 log.47898826._027246.job.log.1
[2026-01-11 09:14:24] -rw-------. 1 boinc boinc       357 Jan 11 09:14 output.list
[2026-01-11 09:14:24] -rw-r--r--. 1 boinc boinc       620 Jan 11 09:14 runtime_log
[2026-01-11 09:14:24] -rw-------. 1 boinc boinc   2969600 Jan 11 09:14 result.tar.gz
[2026-01-11 09:14:24] -rw-r--r--. 1 boinc boinc      8817 Jan 11 09:14 runtime_log.err
[2026-01-11 09:14:24] -rw-------. 1 boinc boinc       657 Jan 11 09:14 EAJMDm0l6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBnkKDmKhDdcm.diag
[2026-01-11 09:14:24] -rw-r--r--. 1 boinc boinc     20834 Jan 11 09:14 stderr.txt
[2026-01-11 09:14:24] HITS file was successfully produced:
[2026-01-11 09:14:24] -rw-------. 1 boinc boinc 222275681 Jan 11 09:09 shared/HITS.pool.root.1
[2026-01-11 09:14:24]  *** Contents of shared directory: ***
[2026-01-11 09:14:24] total 441416
[2026-01-11 09:14:24] -rw-r--r--. 2 boinc boinc 226149076 Jan 11 04:02 ATLAS.root_0
[2026-01-11 09:14:24] -rw-r--r--. 2 boinc boinc     15847 Jan 11 04:02 start_atlas.sh
[2026-01-11 09:14:24] -rw-r--r--. 2 boinc boinc    592398 Jan 11 04:02 input.tar.gz
[2026-01-11 09:14:24] -rw-------. 1 boinc boinc 222275681 Jan 11 09:09 HITS.pool.root.1
[2026-01-11 09:14:24] -rw-------. 1 boinc boinc   2969600 Jan 11 09:14 result.tar.gz
09:14:26 (25486): run_atlas exited; CPU time 73213.709770
09:14:26 (25486): called boinc_finish(0)

</stderr_txt>
]]>

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