Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:48:45 (3337643): wrapper (7.7.26015): starting
19:48:45 (3337643): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 19:48:45] Arguments: --nthreads 12
[2026-01-10 19:48:45] Threads: 12
[2026-01-10 19:48:45] Checking for CVMFS
[2026-01-10 19:48:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 19:48:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 19:48:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 19:48:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 19:48:45] 2.13.3.0 9955 95545 160880 154998 0 265 19936770 32935936 18207 16776704 0 464463507 99.728 324869464 33123 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 19:48:45] CVMFS is ok
[2026-01-10 19:48:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 19:48:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 19:48:45] Further information can be found at the LHC@home message board.
[2026-01-10 19:48:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 19:48:45] Checking for apptainer binary...
[2026-01-10 19:48:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 19:48:45] Running /usr/bin/apptainer --version
[2026-01-10 19:48:45] apptainer version 1.4.5-2.el9
[2026-01-10 19:48:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 19:48:45] c-5-1.aglt2.org
[2026-01-10 19:48:45] apptainer works
[2026-01-10 19:48:45] Set ATHENA_PROC_NUMBER=12
[2026-01-10 19:48:45] Set ATHENA_CORE_NUMBER=12
[2026-01-10 19:48:45] Starting ATLAS job with PandaID=6965866296
[2026-01-10 19:48:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 21:49:36]  *** The last 200 lines of the pilot log: ***
[2026-01-10 21:49:36] 2026-01-11 02:49:02,025 | INFO     | maximum number of monitored processes: 20
[2026-01-10 21:49:36] 2026-01-11 02:49:02,303 | INFO     | time since job start (7205s) is within the limit (349056.0s)
[2026-01-10 21:49:36] 2026-01-11 02:49:03,294 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 21:49:36] 2026-01-11 02:49:03,300 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.0427250000002
[2026-01-10 21:49:36] 2026-01-11 02:49:03,304 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965866296/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 21:49:36] 2026-01-11 02:49:03,305 | INFO     | extracted standard info from prmon json
[2026-01-10 21:49:36] 2026-01-11 02:49:03,305 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 21:49:36] 2026-01-11 02:49:03,305 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 21:49:36] 2026-01-11 02:49:03,307 | INFO     | fitting pss+swap vs Time
[2026-01-10 21:49:36] 2026-01-11 02:49:03,307 | INFO     | sum of square deviations: 509031036.5847462
[2026-01-10 21:49:36] 2026-01-11 02:49:03,308 | INFO     | sum of deviations: 24968359131.406773
[2026-01-10 21:49:36] 2026-01-11 02:49:03,308 | INFO     | mean x: 1768096141.059322
[2026-01-10 21:49:36] 2026-01-11 02:49:03,308 | INFO     | mean y: 2868638.084745763
[2026-01-10 21:49:36] 2026-01-11 02:49:03,308 | INFO     | intersect: -86723590567.65735
[2026-01-10 21:49:36] 2026-01-11 02:49:03,309 | INFO     | chi2: 4.391751831528244
[2026-01-10 21:49:36] 2026-01-11 02:49:03,309 | INFO     | sum of square deviations: 447202963.13274336
[2026-01-10 21:49:36] 2026-01-11 02:49:03,309 | INFO     | sum of deviations: 51339350434.4071
[2026-01-10 21:49:36] 2026-01-11 02:49:03,309 | INFO     | mean x: 1768095988.840708
[2026-01-10 21:49:36] 2026-01-11 02:49:03,310 | INFO     | mean y: 2932847.9115044246
[2026-01-10 21:49:36] 2026-01-11 02:49:03,310 | INFO     | intersect: -202976266880.28552
[2026-01-10 21:49:36] 2026-01-11 02:49:03,310 | INFO     | chi2: 2.4818265465569826
[2026-01-10 21:49:36] 2026-01-11 02:49:03,310 | INFO     | current chi2=2.4818265465569826 (change=43.488916456070434 %)
[2026-01-10 21:49:36] 2026-01-11 02:49:03,310 | INFO     | sum of square deviations: 390582860.2499988
[2026-01-10 21:49:36] 2026-01-11 02:49:03,311 | INFO     | sum of deviations: 51751919353.16668
[2026-01-10 21:49:36] 2026-01-11 02:49:03,311 | INFO     | mean x: 1768095836.5833333
[2026-01-10 21:49:36] 2026-01-11 02:49:03,311 | INFO     | mean y: 2933789.425925926
[2026-01-10 21:49:36] 2026-01-11 02:49:03,311 | INFO     | intersect: -234268362920.7341
[2026-01-10 21:49:36] 2026-01-11 02:49:03,311 | INFO     | chi2: 2.4209259245165744
[2026-01-10 21:49:36] 2026-01-11 02:49:03,311 | INFO     | current chi2=2.4209259245165744 (change=2.4538629472271207 %)
[2026-01-10 21:49:36] 2026-01-11 02:49:03,311 | INFO     | right removable region: 107
[2026-01-10 21:49:36] 2026-01-11 02:49:03,311 | INFO     | sum of square deviations: 446737764.4424771
[2026-01-10 21:49:36] 2026-01-11 02:49:03,312 | INFO     | sum of deviations: -8712434926.371681
[2026-01-10 21:49:36] 2026-01-11 02:49:03,312 | INFO     | mean x: 1768096293.8495576
[2026-01-10 21:49:36] 2026-01-11 02:49:03,312 | INFO     | mean y: 2950642.5663716816
[2026-01-10 21:49:36] 2026-01-11 02:49:03,312 | INFO     | intersect: 34484978198.36912
[2026-01-10 21:49:36] 2026-01-11 02:49:03,312 | INFO     | chi2: 2.02959702547171
[2026-01-10 21:49:36] 2026-01-11 02:49:03,312 | INFO     | current chi2=2.02959702547171 (change=53.78616316838991 %)
[2026-01-10 21:49:36] 2026-01-11 02:49:03,313 | INFO     | sum of square deviations: 389955257.6574077
[2026-01-10 21:49:36] 2026-01-11 02:49:03,313 | INFO     | sum of deviations: -11392189691.99074
[2026-01-10 21:49:36] 2026-01-11 02:49:03,313 | INFO     | mean x: 1768096446.324074
[2026-01-10 21:49:36] 2026-01-11 02:49:03,313 | INFO     | mean y: 2957815.342592593
[2026-01-10 21:49:36] 2026-01-11 02:49:03,313 | INFO     | intersect: 51656294229.528366
[2026-01-10 21:49:36] 2026-01-11 02:49:03,313 | INFO     | chi2: 2.0190384262711896
[2026-01-10 21:49:36] 2026-01-11 02:49:03,314 | INFO     | current chi2=2.0190384262711896 (change=0.5202313103541525 %)
[2026-01-10 21:49:36] 2026-01-11 02:49:03,314 | INFO     | left removable region: 20
[2026-01-10 21:49:36] 2026-01-11 02:49:03,314 | INFO     | sum of square deviations: 204025552.98850578
[2026-01-10 21:49:36] 2026-01-11 02:49:03,314 | INFO     | sum of deviations: 10653726296.72414
[2026-01-10 21:49:36] 2026-01-11 02:49:03,314 | INFO     | mean x: 1768096416.321839
[2026-01-10 21:49:36] 2026-01-11 02:49:03,315 | INFO     | mean y: 3057484.724137931
[2026-01-10 21:49:36] 2026-01-11 02:49:03,315 | INFO     | intersect: -92322707645.16086
[2026-01-10 21:49:36] 2026-01-11 02:49:03,315 | INFO     | chi2: 0.01228966318810615
[2026-01-10 21:49:36] 2026-01-11 02:49:03,315 | INFO     | current memory leak: 52.22 B/s (using 87 data points, chi2=0.01)
[2026-01-10 21:49:36] 2026-01-11 02:49:03,316 | INFO     | could have reported an average CPU frequency of 2600 MHz (7 samples)
[2026-01-10 21:49:36] 2026-01-11 02:49:03,316 | INFO     | ..............................
[2026-01-10 21:49:36] 2026-01-11 02:49:03,316 | INFO     | . Timing measurements:
[2026-01-10 21:49:36] 2026-01-11 02:49:03,316 | INFO     | . get job = 0 s
[2026-01-10 21:49:36] 2026-01-11 02:49:03,316 | INFO     | . initial setup = 2 s
[2026-01-10 21:49:36] 2026-01-11 02:49:03,316 | INFO     | . payload setup = 6 s
[2026-01-10 21:49:36] 2026-01-11 02:49:03,316 | INFO     | . stage-in = 0 s
[2026-01-10 21:49:36] 2026-01-11 02:49:03,317 | INFO     | . payload execution = 7172 s
[2026-01-10 21:49:36] 2026-01-11 02:49:03,317 | INFO     | . stage-out = 0 s
[2026-01-10 21:49:36] 2026-01-11 02:49:03,317 | INFO     | . log creation = 0 s
[2026-01-10 21:49:36] 2026-01-11 02:49:03,317 | INFO     | ..............................
[2026-01-10 21:49:36] 2026-01-11 02:49:03,389 | INFO     | 
[2026-01-10 21:49:36] 2026-01-11 02:49:03,390 | INFO     | job summary report
[2026-01-10 21:49:36] 2026-01-11 02:49:03,390 | INFO     | --------------------------------------------------
[2026-01-10 21:49:36] 2026-01-11 02:49:03,391 | INFO     | PanDA job id: 6965866296
[2026-01-10 21:49:36] 2026-01-11 02:49:03,391 | INFO     | task id: 47962010
[2026-01-10 21:49:36] 2026-01-11 02:49:03,391 | INFO     | errors: (none)
[2026-01-10 21:49:36] 2026-01-11 02:49:03,391 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 21:49:36] 2026-01-11 02:49:03,391 | INFO     | pilot state: finished 
[2026-01-10 21:49:36] 2026-01-11 02:49:03,391 | INFO     | transexitcode: 0
[2026-01-10 21:49:36] 2026-01-11 02:49:03,391 | INFO     | exeerrorcode: 0
[2026-01-10 21:49:36] 2026-01-11 02:49:03,391 | INFO     | exeerrordiag: 
[2026-01-10 21:49:36] 2026-01-11 02:49:03,392 | INFO     | exitcode: 0
[2026-01-10 21:49:36] 2026-01-11 02:49:03,392 | INFO     | exitmsg: OK
[2026-01-10 21:49:36] 2026-01-11 02:49:03,392 | INFO     | cpuconsumptiontime: 17453 s
[2026-01-10 21:49:36] 2026-01-11 02:49:03,392 | INFO     | nevents: 50
[2026-01-10 21:49:36] 2026-01-11 02:49:03,392 | INFO     | neventsw: 0
[2026-01-10 21:49:36] 2026-01-11 02:49:03,392 | INFO     | pid: 3351815
[2026-01-10 21:49:36] 2026-01-11 02:49:03,392 | INFO     | pgrp: 3351815
[2026-01-10 21:49:36] 2026-01-11 02:49:03,392 | INFO     | corecount: 12
[2026-01-10 21:49:36] 2026-01-11 02:49:03,393 | INFO     | event service: False
[2026-01-10 21:49:36] 2026-01-11 02:49:03,393 | INFO     | sizes: {0: 2284568, 4: 2284830, 11: 2284858, 7183: 2312733, 7186: 2321783, 7190: 2321973}
[2026-01-10 21:49:36] 2026-01-11 02:49:03,393 | INFO     | --------------------------------------------------
[2026-01-10 21:49:36] 2026-01-11 02:49:03,393 | INFO     | 
[2026-01-10 21:49:36] 2026-01-11 02:49:03,393 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 21:49:36] 2026-01-11 02:49:03,414 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 21:49:36] 2026-01-11 02:49:03,415 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 21:49:36] 2026-01-11 02:49:03,415 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 21:49:36] 2026-01-11 02:49:03,415 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 21:49:36] 2026-01-11 02:49:03,416 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 21:49:36] 2026-01-11 02:49:03,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 21:49:36] 2026-01-11 02:49:03,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 21:49:36] 2026-01-11 02:49:03,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 21:49:36] 2026-01-11 02:49:03,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 21:49:36] 2026-01-11 02:49:03,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 21:49:36] 2026-01-11 02:49:03,417 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 21:49:36] 2026-01-11 02:49:03,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 21:49:36] 2026-01-11 02:49:03,417 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 21:49:36] 2026-01-11 02:49:03,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 21:49:36] 2026-01-11 02:49:03,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 21:49:36] 2026-01-11 02:49:03,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 21:49:36] 2026-01-11 02:49:03,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 21:49:36] 2026-01-11 02:49:03,417 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 21:49:36] 2026-01-11 02:49:03,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 21:49:36] 2026-01-11 02:49:03,418 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 21:49:36] 2026-01-11 02:49:03,418 | INFO     | job 6965866296 has completed (purged errors)
[2026-01-10 21:49:36] 2026-01-11 02:49:03,418 | INFO     | overall cleanup function is called
[2026-01-10 21:49:36] 2026-01-11 02:49:03,919 | INFO     | PID=3341322 has CPU usage=14.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 21:49:36] 2026-01-11 02:49:03,920 | INFO     | .. there are 27 such processes running
[2026-01-10 21:49:36] 2026-01-11 02:49:04,445 | INFO     | --- collectZombieJob: --- 10, [3351815]
[2026-01-10 21:49:36] 2026-01-11 02:49:04,445 | INFO     | zombie collector waiting for pid 3351815
[2026-01-10 21:49:36] 2026-01-11 02:49:04,445 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 21:49:36] 2026-01-11 02:49:04,445 | INFO     | collected zombie processes
[2026-01-10 21:49:36] 2026-01-11 02:49:04,446 | INFO     | will attempt to kill all subprocesses of pid=3351815
[2026-01-10 21:49:36] 2026-01-11 02:49:04,843 | INFO     | process IDs to be killed: [3351815] (in reverse order)
[2026-01-10 21:49:36] 2026-01-11 02:49:04,920 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 21:49:36] 2026-01-11 02:49:04,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 21:49:36] 2026-01-11 02:49:04,930 | INFO     | did not find any defunct processes belonging to 3351815
[2026-01-10 21:49:36] 2026-01-11 02:49:04,939 | INFO     | did not find any defunct processes belonging to 3351815
[2026-01-10 21:49:36] 2026-01-11 02:49:04,940 | INFO     | ready for new job
[2026-01-10 21:49:36] 2026-01-11 02:49:04,940 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 21:49:36] 2026-01-11 02:49:04,941 | INFO     | ***************************************
[2026-01-10 21:49:36] 2026-01-11 02:49:04,941 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 21:49:36] 2026-01-11 02:49:04,941 | INFO     | ***************************************
[2026-01-10 21:49:36] 2026-01-11 02:49:04,941 | INFO     | 
[2026-01-10 21:49:36] 2026-01-11 02:49:04,943 | INFO     | architecture information:
[2026-01-10 21:49:36] 2026-01-11 02:49:04,943 | INFO     | executing command: cat /etc/os-release
[2026-01-10 21:49:36] 2026-01-11 02:49:04,954 | INFO     | cat /etc/os-release:
[2026-01-10 21:49:36] NAME="CentOS Linux"
[2026-01-10 21:49:36] VERSION="7 (Core)"
[2026-01-10 21:49:36] ID="centos"
[2026-01-10 21:49:36] ID_LIKE="rhel fedora"
[2026-01-10 21:49:36] VERSION_ID="7"
[2026-01-10 21:49:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 21:49:36] ANSI_COLOR="0;31"
[2026-01-10 21:49:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 21:49:36] HOME_URL="https://www.centos.org/"
[2026-01-10 21:49:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 21:49:36] 
[2026-01-10 21:49:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 21:49:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 21:49:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 21:49:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 21:49:36] 
[2026-01-10 21:49:36] 2026-01-11 02:49:04,954 | INFO     | ***************************************
[2026-01-10 21:49:36] 2026-01-11 02:49:05,458 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 21:49:36] 2026-01-11 02:49:05,475 | INFO     | sufficient remaining disk space (76337381376 B)
[2026-01-10 21:49:36] 2026-01-11 02:49:05,475 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 21:49:36] 2026-01-11 02:49:05,475 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 21:49:36] 2026-01-11 02:49:05,475 | INFO     | update_server=False
[2026-01-10 21:49:36] 2026-01-11 02:49:05,476 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 21:49:36] 2026-01-11 02:49:05,476 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 21:49:36] 2026-01-11 02:49:05,535 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:49:36] 2026-01-11 02:49:05,535 | INFO     | aborting loop
[2026-01-10 21:49:36] 2026-01-11 02:49:06,137 | INFO     | all data control threads have been joined
[2026-01-10 21:49:36] 2026-01-11 02:49:06,374 | INFO     | all payload control threads have been joined
[2026-01-10 21:49:36] 2026-01-11 02:49:06,481 | INFO     | [job] retrieve thread has finished
[2026-01-10 21:49:36] 2026-01-11 02:49:06,540 | INFO     | [job] job monitor thread has finished
[2026-01-10 21:49:36] 2026-01-11 02:49:06,606 | INFO     | all job control threads have been joined
[2026-01-10 21:49:36] 2026-01-11 02:49:06,624 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 21:49:36] 2026-01-11 02:49:06,910 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 21:49:36] 2026-01-11 02:49:07,069 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 21:49:36] 2026-01-11 02:49:07,142 | INFO     | [data] control thread has finished
[2026-01-10 21:49:36] 2026-01-11 02:49:07,148 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 21:49:36] 2026-01-11 02:49:07,302 | INFO     | [payload] validate_post thread has finished
[2026-01-10 21:49:36] 2026-01-11 02:49:07,380 | INFO     | [payload] control thread has finished
[2026-01-10 21:49:36] 2026-01-11 02:49:07,493 | INFO     | [job] validate thread has finished
[2026-01-10 21:49:36] 2026-01-11 02:49:07,608 | INFO     | [job] control thread has finished
[2026-01-10 21:49:36] 2026-01-11 02:49:07,703 | INFO     | [payload] failed_post thread has finished
[2026-01-10 21:49:36] 2026-01-11 02:49:07,713 | INFO     | [data] copytool_in thread has finished
[2026-01-10 21:49:36] 2026-01-11 02:49:07,714 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 21:49:36] 2026-01-11 02:49:08,403 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:49:36] 2026-01-11 02:49:08,911 | INFO     | [data] copytool_out thread has finished
[2026-01-10 21:49:36] 2026-01-11 02:49:09,408 | INFO     | [job] queue monitor thread has finished
[2026-01-10 21:49:36] 2026-01-11 02:49:09,483 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 21:49:36] 2026-01-11 02:49:11,212 | INFO     | [monitor] cgroup control has ended
[2026-01-10 21:49:36] 2026-01-11 02:49:12,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140114364630848)>', '<ExcThread(monitor, started 140113879217920)>']
[2026-01-10 21:49:36] 2026-01-11 02:49:17,247 | INFO     | all workflow threads have been joined
[2026-01-10 21:49:36] 2026-01-11 02:49:17,249 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 21:49:36] 2026-01-11 02:49:17,249 | INFO     | traces error code: 0
[2026-01-10 21:49:36] 2026-01-11 02:49:17,249 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 21:49:36] 2026-01-11 02:49:36,433 | INFO     | PID=3341322 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 21:49:36] 2026-01-11 02:49:36,434 | INFO     | .. there are 27 such processes running
[2026-01-10 21:49:36] 2026-01-11 02:49:36,435 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 21:49:36] 2026-01-11 02:49:36,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 21:49:36] 2026-01-11 02:49:36,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 21:49:36] 2026-01-11 02:49:36,435 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 21:49:36] 2026-01-11 02:49:36,435 | INFO     | [monitor] control thread has ended
[2026-01-10 21:49:36] 2026-01-11 02:49:36,595 [wrapper] ==== pilot stdout END ====
[2026-01-10 21:49:36] 2026-01-11 02:49:36,599 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 21:49:36] 2026-01-11 02:49:36,602 [wrapper] pilotpid: 3341322
[2026-01-10 21:49:36] 2026-01-11 02:49:36,604 [wrapper] Pilot exit status: 0
[2026-01-10 21:49:36] 2026-01-11 02:49:36,613 [wrapper] pandaids: 6965866296
[2026-01-10 21:49:36] 2026-01-11 02:49:36,684 [wrapper] cleanup supervisor_pilot 3742539 3341323
[2026-01-10 21:49:36] 2026-01-11 02:49:36,687 [wrapper] Test setup, not cleaning
[2026-01-10 21:49:36] 2026-01-11 02:49:36,689 [wrapper] apfmon messages muted
[2026-01-10 21:49:36] 2026-01-11 02:49:36,692 [wrapper] ==== wrapper stdout END ====
[2026-01-10 21:49:36] 2026-01-11 02:49:36,695 [wrapper] ==== wrapper stderr END ====
[2026-01-10 21:49:36]  *** Error codes and diagnostics ***
[2026-01-10 21:49:36]     "exeErrorCode": 0,
[2026-01-10 21:49:36]     "exeErrorDiag": "",
[2026-01-10 21:49:36]     "pilotErrorCode": 0,
[2026-01-10 21:49:36]     "pilotErrorDiag": "",
[2026-01-10 21:49:36]  *** Listing of results directory ***
[2026-01-10 21:49:36] total 433852
[2026-01-10 21:49:36] -rwx------. 1 boincer umatlas     36322 Jan 10 19:47 runpilot2-wrapper.sh
[2026-01-10 21:49:36] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 19:47 queuedata.json
[2026-01-10 21:49:36] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 19:47 pilot3.tar.gz
[2026-01-10 21:49:36] -rw-r--r--. 1 boincer umatlas       100 Jan 10 19:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 21:49:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 19:48 run_atlas
[2026-01-10 21:49:36] -rw-r--r--. 1 boincer umatlas       105 Jan 10 19:48 job.xml
[2026-01-10 21:49:36] -rw-r--r--. 2 boincer umatlas 391830875 Jan 10 19:48 EVNT.47962006._000054.pool.root.1
[2026-01-10 21:49:36] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 19:48 start_atlas.sh
[2026-01-10 21:49:36] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 19:48 shared
[2026-01-10 21:49:36] -rw-r--r--. 2 boincer umatlas    592596 Jan 10 19:48 input.tar.gz
[2026-01-10 21:49:36] -rw-r--r--. 1 boincer umatlas         0 Jan 10 19:48 boinc_lockfile
[2026-01-10 21:49:36] -rw-r--r--. 1 boincer umatlas      2889 Jan 10 19:48 pandaJob.out
[2026-01-10 21:49:36] -rw-------. 1 boincer umatlas        57 Jan 10 19:48 setup.sh.local
[2026-01-10 21:49:36] -rw-------. 1 boincer umatlas    989540 Jan 10 19:48 agis_schedconf.cvmfs.json
[2026-01-10 21:49:36] -rw-------. 1 boincer umatlas   1516240 Jan 10 19:48 agis_ddmendpoints.agis.ALL.json
[2026-01-10 21:49:36] drwx------. 5 boincer umatlas      4096 Jan 10 19:48 pilot3
[2026-01-10 21:49:36] -rw-r--r--. 1 boincer umatlas       529 Jan 10 21:39 boinc_task_state.xml
[2026-01-10 21:49:36] -rw-r--r--. 1 boincer umatlas      6658 Jan 10 21:48 init_data.xml
[2026-01-10 21:49:36] -rw-------. 1 boincer umatlas  43525740 Jan 10 21:48 HITS.47962010._002933.pool.root.1
[2026-01-10 21:49:36] -rw-------. 1 boincer umatlas      1038 Jan 10 21:48 memory_monitor_summary.json
[2026-01-10 21:49:36] -rw-------. 1 boincer umatlas   1644872 Jan 10 21:48 log.47962010._002933.job.log.tgz.1
[2026-01-10 21:49:36] -rw-------. 1 boincer umatlas      8562 Jan 10 21:49 heartbeat.json
[2026-01-10 21:49:36] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 21:49 boinc_mmap_file
[2026-01-10 21:49:36] -rw-r--r--. 1 boincer umatlas        27 Jan 10 21:49 wrapper_checkpoint.txt
[2026-01-10 21:49:36] -rw-------. 1 boincer umatlas       823 Jan 10 21:49 pilotlog.txt
[2026-01-10 21:49:36] -rw-------. 1 boincer umatlas        95 Jan 10 21:49 pilot_heartbeat.json
[2026-01-10 21:49:36] -rw-------. 1 boincer umatlas    852024 Jan 10 21:49 log.47962010._002933.job.log.1
[2026-01-10 21:49:36] -rw-------. 1 boincer umatlas       353 Jan 10 21:49 output.list
[2026-01-10 21:49:36] -rw-r--r--. 1 boincer umatlas       620 Jan 10 21:49 runtime_log
[2026-01-10 21:49:36] -rw-------. 1 boincer umatlas   2519040 Jan 10 21:49 result.tar.gz
[2026-01-10 21:49:36] -rw-------. 1 boincer umatlas       651 Jan 10 21:49 UV3KDmmnyy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5xmKDm9LnJUm.diag
[2026-01-10 21:49:36] -rw-r--r--. 1 boincer umatlas      9329 Jan 10 21:49 runtime_log.err
[2026-01-10 21:49:36] -rw-r--r--. 1 boincer umatlas     21244 Jan 10 21:49 stderr.txt
[2026-01-10 21:49:36] HITS file was successfully produced:
[2026-01-10 21:49:36] -rw-------. 1 boincer umatlas 43525740 Jan 10 21:48 shared/HITS.pool.root.1
[2026-01-10 21:49:36]  *** Contents of shared directory: ***
[2026-01-10 21:49:36] total 428212
[2026-01-10 21:49:36] -rw-r--r--. 2 boincer umatlas 391830875 Jan 10 19:48 ATLAS.root_0
[2026-01-10 21:49:36] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 19:48 start_atlas.sh
[2026-01-10 21:49:36] -rw-r--r--. 2 boincer umatlas    592596 Jan 10 19:48 input.tar.gz
[2026-01-10 21:49:36] -rw-------. 1 boincer umatlas  43525740 Jan 10 21:48 HITS.pool.root.1
[2026-01-10 21:49:36] -rw-------. 1 boincer umatlas   2519040 Jan 10 21:49 result.tar.gz
21:49:38 (3337643): run_atlas exited; CPU time 17544.580741
21:49:38 (3337643): called boinc_finish(0)

</stderr_txt>
]]>

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