Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:44:11 (315757): wrapper (7.7.26015): starting
19:44:11 (315757): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 19:44:11] Arguments: --nthreads 8
[2026-01-10 19:44:11] Threads: 8
[2026-01-10 19:44:11] Checking for CVMFS
[2026-01-10 19:44:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 19:44:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 19:44:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 19:44:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 19:44:12] 2.13.3.0 6592 16164 140888 154998 1 54 27319029 40960001 18931 16776704 0 21680514 99.798 14189999 43222 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 19:44:12] CVMFS is ok
[2026-01-10 19:44:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 19:44:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 19:44:12] Further information can be found at the LHC@home message board.
[2026-01-10 19:44:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 19:44:12] Checking for apptainer binary...
[2026-01-10 19:44:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 19:44:12] Running /usr/bin/apptainer --version
[2026-01-10 19:44:12] apptainer version 1.4.5-2.el9
[2026-01-10 19:44:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 19:44:12] c-211-35-2.aglt2.org
[2026-01-10 19:44:12] apptainer works
[2026-01-10 19:44:12] Set ATHENA_PROC_NUMBER=8
[2026-01-10 19:44:12] Set ATHENA_CORE_NUMBER=8
[2026-01-10 19:44:12] Starting ATLAS job with PandaID=6963161485
[2026-01-10 19:44:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 22:16:08]  *** The last 200 lines of the pilot log: ***
[2026-01-10 22:16:08] 2026-01-11 03:15:31,774 | INFO     | executing command: lscpu
[2026-01-10 22:16:08] 2026-01-11 03:15:31,834 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 22:16:08] 2026-01-11 03:15:31,949 | INFO     | monitor loop #623: job 0:6963161485 is in state 'finished'
[2026-01-10 22:16:08] 2026-01-11 03:15:31,949 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 22:16:08] 2026-01-11 03:15:32,780 | INFO     | time since job start (9062s) is within the limit (349056.0s)
[2026-01-10 22:16:08] 2026-01-11 03:15:34,452 | INFO     | monitor loop #624: job 0:6963161485 is in state 'finished'
[2026-01-10 22:16:08] 2026-01-11 03:15:34,452 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 22:16:08] 2026-01-11 03:15:34,785 | INFO     | time since job start (9064s) is within the limit (349056.0s)
[2026-01-10 22:16:08] 2026-01-11 03:15:35,318 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 22:16:08] 2026-01-11 03:15:35,329 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2775.9044791666674
[2026-01-10 22:16:08] 2026-01-11 03:15:35,345 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963161485/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 22:16:08] 2026-01-11 03:15:35,346 | INFO     | extracted standard info from prmon json
[2026-01-10 22:16:08] 2026-01-11 03:15:35,347 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 22:16:08] 2026-01-11 03:15:35,347 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 22:16:08] 2026-01-11 03:15:35,347 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 22:16:08] 2026-01-11 03:15:35,347 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 22:16:08] 2026-01-11 03:15:35,350 | INFO     | fitting pss+swap vs Time
[2026-01-10 22:16:08] 2026-01-11 03:15:35,350 | INFO     | sum of square deviations: 1005179777.0
[2026-01-10 22:16:08] 2026-01-11 03:15:35,351 | INFO     | sum of deviations: -5026222977.999998
[2026-01-10 22:16:08] 2026-01-11 03:15:35,351 | INFO     | mean x: 1768096798.5
[2026-01-10 22:16:08] 2026-01-11 03:15:35,351 | INFO     | mean y: 2584566.621621622
[2026-01-10 22:16:08] 2026-01-11 03:15:35,351 | INFO     | intersect: 8843638634.056301
[2026-01-10 22:16:08] 2026-01-11 03:15:35,351 | INFO     | chi2: 1.8979999030923183
[2026-01-10 22:16:08] 2026-01-11 03:15:35,352 | INFO     | sum of square deviations: 906703512.0
[2026-01-10 22:16:08] 2026-01-11 03:15:35,353 | INFO     | sum of deviations: -4547085667.999996
[2026-01-10 22:16:08] 2026-01-11 03:15:35,353 | INFO     | mean x: 1768096646.0
[2026-01-10 22:16:08] 2026-01-11 03:15:35,353 | INFO     | mean y: 2585309.6993006994
[2026-01-10 22:16:08] 2026-01-11 03:15:35,353 | INFO     | intersect: 8869526721.375957
[2026-01-10 22:16:08] 2026-01-11 03:15:35,353 | INFO     | chi2: 1.8979387347306351
[2026-01-10 22:16:08] 2026-01-11 03:15:35,353 | INFO     | current chi2=1.8979387347306351 (change=0.00322278002140409 %)
[2026-01-10 22:16:08] 2026-01-11 03:15:35,353 | INFO     | right removable region: 142
[2026-01-10 22:16:08] 2026-01-11 03:15:35,354 | INFO     | sum of square deviations: 906703512.0
[2026-01-10 22:16:08] 2026-01-11 03:15:35,354 | INFO     | sum of deviations: -29742795531.999996
[2026-01-10 22:16:08] 2026-01-11 03:15:35,354 | INFO     | mean x: 1768096951.0
[2026-01-10 22:16:08] 2026-01-11 03:15:35,354 | INFO     | mean y: 2622282.090909091
[2026-01-10 22:16:08] 2026-01-11 03:15:35,355 | INFO     | intersect: 58001897015.62213
[2026-01-10 22:16:08] 2026-01-11 03:15:35,355 | INFO     | chi2: 0.25572044538150773
[2026-01-10 22:16:08] 2026-01-11 03:15:35,355 | INFO     | current chi2=0.25572044538150773 (change=86.52684623614178 %)
[2026-01-10 22:16:08] 2026-01-11 03:15:35,355 | INFO     | sum of square deviations: 814878534.5
[2026-01-10 22:16:08] 2026-01-11 03:15:35,356 | INFO     | sum of deviations: -29025430804.500004
[2026-01-10 22:16:08] 2026-01-11 03:15:35,356 | INFO     | mean x: 1768097103.5
[2026-01-10 22:16:08] 2026-01-11 03:15:35,356 | INFO     | mean y: 2621034.731884058
[2026-01-10 22:16:08] 2026-01-11 03:15:35,356 | INFO     | intersect: 62981062557.63365
[2026-01-10 22:16:08] 2026-01-11 03:15:35,356 | INFO     | chi2: 0.23907159400593198
[2026-01-10 22:16:08] 2026-01-11 03:15:35,356 | INFO     | current chi2=0.23907159400593198 (change=6.51056717453211 %)
[2026-01-10 22:16:08] 2026-01-11 03:15:35,356 | INFO     | left removable region: 20
[2026-01-10 22:16:08] 2026-01-11 03:15:35,357 | INFO     | sum of square deviations: 563026370.5
[2026-01-10 22:16:08] 2026-01-11 03:15:35,357 | INFO     | sum of deviations: -15397266199.999994
[2026-01-10 22:16:08] 2026-01-11 03:15:35,357 | INFO     | mean x: 1768097225.5
[2026-01-10 22:16:08] 2026-01-11 03:15:35,357 | INFO     | mean y: 2598856.229508197
[2026-01-10 22:16:08] 2026-01-11 03:15:35,358 | INFO     | intersect: 48355331649.772644
[2026-01-10 22:16:08] 2026-01-11 03:15:35,358 | INFO     | chi2: 0.18723127488322566
[2026-01-10 22:16:08] 2026-01-11 03:15:35,358 | INFO     | current memory leak: -27.35 B/s (using 122 data points, chi2=0.19)
[2026-01-10 22:16:08] 2026-01-11 03:15:35,358 | INFO     | could have reported an average CPU frequency of 2713 MHz (8 samples)
[2026-01-10 22:16:08] 2026-01-11 03:15:35,359 | INFO     | ..............................
[2026-01-10 22:16:08] 2026-01-11 03:15:35,359 | INFO     | . Timing measurements:
[2026-01-10 22:16:08] 2026-01-11 03:15:35,359 | INFO     | . get job = 0 s
[2026-01-10 22:16:08] 2026-01-11 03:15:35,359 | INFO     | . initial setup = 3 s
[2026-01-10 22:16:08] 2026-01-11 03:15:35,359 | INFO     | . payload setup = 13 s
[2026-01-10 22:16:08] 2026-01-11 03:15:35,359 | INFO     | . stage-in = 0 s
[2026-01-10 22:16:08] 2026-01-11 03:15:35,359 | INFO     | . payload execution = 9020 s
[2026-01-10 22:16:08] 2026-01-11 03:15:35,359 | INFO     | . stage-out = 0 s
[2026-01-10 22:16:08] 2026-01-11 03:15:35,359 | INFO     | . log creation = 0 s
[2026-01-10 22:16:08] 2026-01-11 03:15:35,359 | INFO     | ..............................
[2026-01-10 22:16:08] 2026-01-11 03:15:35,526 | INFO     | 
[2026-01-10 22:16:08] 2026-01-11 03:15:35,526 | INFO     | job summary report
[2026-01-10 22:16:08] 2026-01-11 03:15:35,526 | INFO     | --------------------------------------------------
[2026-01-10 22:16:08] 2026-01-11 03:15:35,526 | INFO     | PanDA job id: 6963161485
[2026-01-10 22:16:08] 2026-01-11 03:15:35,526 | INFO     | task id: 47898826
[2026-01-10 22:16:08] 2026-01-11 03:15:35,526 | INFO     | errors: (none)
[2026-01-10 22:16:08] 2026-01-11 03:15:35,526 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 22:16:08] 2026-01-11 03:15:35,526 | INFO     | pilot state: finished 
[2026-01-10 22:16:08] 2026-01-11 03:15:35,526 | INFO     | transexitcode: 0
[2026-01-10 22:16:08] 2026-01-11 03:15:35,527 | INFO     | exeerrorcode: 0
[2026-01-10 22:16:08] 2026-01-11 03:15:35,527 | INFO     | exeerrordiag: 
[2026-01-10 22:16:08] 2026-01-11 03:15:35,527 | INFO     | exitcode: 0
[2026-01-10 22:16:08] 2026-01-11 03:15:35,527 | INFO     | exitmsg: OK
[2026-01-10 22:16:08] 2026-01-11 03:15:35,527 | INFO     | cpuconsumptiontime: 55999 s
[2026-01-10 22:16:08] 2026-01-11 03:15:35,527 | INFO     | nevents: 400
[2026-01-10 22:16:08] 2026-01-11 03:15:35,527 | INFO     | neventsw: 0
[2026-01-10 22:16:08] 2026-01-11 03:15:35,527 | INFO     | pid: 325889
[2026-01-10 22:16:08] 2026-01-11 03:15:35,527 | INFO     | pgrp: 325889
[2026-01-10 22:16:08] 2026-01-11 03:15:35,527 | INFO     | corecount: 8
[2026-01-10 22:16:08] 2026-01-11 03:15:35,527 | INFO     | event service: False
[2026-01-10 22:16:08] 2026-01-11 03:15:35,527 | INFO     | sizes: {0: 2283143, 1: 2283999, 7: 2284261, 12: 2284289, 9037: 2312682, 9038: 2312681, 9039: 2321863, 9041: 2321919, 9047: 2322113}
[2026-01-10 22:16:08] 2026-01-11 03:15:35,527 | INFO     | --------------------------------------------------
[2026-01-10 22:16:08] 2026-01-11 03:15:35,527 | INFO     | 
[2026-01-10 22:16:08] 2026-01-11 03:15:35,528 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 22:16:08] 2026-01-11 03:15:35,546 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 22:16:08] 2026-01-11 03:15:35,547 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 22:16:08] 2026-01-11 03:15:35,547 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 22:16:08] 2026-01-11 03:15:35,547 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 22:16:08] 2026-01-11 03:15:35,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 22:16:08] 2026-01-11 03:15:35,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 22:16:08] 2026-01-11 03:15:35,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 22:16:08] 2026-01-11 03:15:35,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 22:16:08] 2026-01-11 03:15:35,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 22:16:08] 2026-01-11 03:15:35,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 22:16:08] 2026-01-11 03:15:35,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 22:16:08] 2026-01-11 03:15:35,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 22:16:08] 2026-01-11 03:15:35,547 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 22:16:08] 2026-01-11 03:15:35,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 22:16:08] 2026-01-11 03:15:35,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 22:16:08] 2026-01-11 03:15:35,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 22:16:08] 2026-01-11 03:15:35,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 22:16:08] 2026-01-11 03:15:35,548 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 22:16:08] 2026-01-11 03:15:35,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 22:16:08] 2026-01-11 03:15:35,548 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 22:16:08] 2026-01-11 03:15:35,548 | INFO     | job 6963161485 has completed (purged errors)
[2026-01-10 22:16:08] 2026-01-11 03:15:35,548 | INFO     | overall cleanup function is called
[2026-01-10 22:16:08] 2026-01-11 03:15:36,556 | INFO     | --- collectZombieJob: --- 10, [325889]
[2026-01-10 22:16:08] 2026-01-11 03:15:36,556 | INFO     | zombie collector waiting for pid 325889
[2026-01-10 22:16:08] 2026-01-11 03:15:36,557 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 22:16:08] 2026-01-11 03:15:36,557 | INFO     | collected zombie processes
[2026-01-10 22:16:08] 2026-01-11 03:15:36,557 | INFO     | will attempt to kill all subprocesses of pid=325889
[2026-01-10 22:16:08] 2026-01-11 03:15:36,847 | INFO     | process IDs to be killed: [325889] (in reverse order)
[2026-01-10 22:16:08] 2026-01-11 03:15:36,940 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 22:16:08] 2026-01-11 03:15:36,941 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 22:16:08] 2026-01-11 03:15:36,949 | INFO     | did not find any defunct processes belonging to 325889
[2026-01-10 22:16:08] 2026-01-11 03:15:36,957 | INFO     | did not find any defunct processes belonging to 325889
[2026-01-10 22:16:08] 2026-01-11 03:15:36,957 | INFO     | ready for new job
[2026-01-10 22:16:08] 2026-01-11 03:15:36,957 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 22:16:08] 2026-01-11 03:15:36,959 | INFO     | ***************************************
[2026-01-10 22:16:08] 2026-01-11 03:15:36,959 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 22:16:08] 2026-01-11 03:15:36,959 | INFO     | ***************************************
[2026-01-10 22:16:08] 2026-01-11 03:15:36,959 | INFO     | 
[2026-01-10 22:16:08] 2026-01-11 03:15:36,962 | INFO     | architecture information:
[2026-01-10 22:16:08] 2026-01-11 03:15:36,963 | INFO     | executing command: cat /etc/os-release
[2026-01-10 22:16:08] 2026-01-11 03:15:36,973 | INFO     | cat /etc/os-release:
[2026-01-10 22:16:08] NAME="CentOS Linux"
[2026-01-10 22:16:08] VERSION="7 (Core)"
[2026-01-10 22:16:08] ID="centos"
[2026-01-10 22:16:08] ID_LIKE="rhel fedora"
[2026-01-10 22:16:08] VERSION_ID="7"
[2026-01-10 22:16:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 22:16:08] ANSI_COLOR="0;31"
[2026-01-10 22:16:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 22:16:08] HOME_URL="https://www.centos.org/"
[2026-01-10 22:16:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 22:16:08] 
[2026-01-10 22:16:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 22:16:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 22:16:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 22:16:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 22:16:08] 
[2026-01-10 22:16:08] 2026-01-11 03:15:36,973 | INFO     | ***************************************
[2026-01-10 22:16:08] 2026-01-11 03:15:37,476 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 22:16:08] 2026-01-11 03:15:37,492 | INFO     | sufficient remaining disk space (129790640128 B)
[2026-01-10 22:16:08] 2026-01-11 03:15:37,492 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 22:16:08] 2026-01-11 03:15:37,492 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 22:16:08] 2026-01-11 03:15:37,492 | INFO     | update_server=False
[2026-01-10 22:16:08] 2026-01-11 03:15:37,492 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 22:16:08] 2026-01-11 03:15:37,824 | INFO     | all data control threads have been joined
[2026-01-10 22:16:08] 2026-01-11 03:15:37,960 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 22:16:08] 2026-01-11 03:15:37,960 | INFO     | aborting loop
[2026-01-10 22:16:08] 2026-01-11 03:15:38,164 | INFO     | all payload control threads have been joined
[2026-01-10 22:16:08] 2026-01-11 03:15:38,499 | INFO     | [job] retrieve thread has finished
[2026-01-10 22:16:08] 2026-01-11 03:15:38,528 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 22:16:08] 2026-01-11 03:15:38,540 | INFO     | [payload] validate_post thread has finished
[2026-01-10 22:16:08] 2026-01-11 03:15:38,557 | INFO     | [data] copytool_in thread has finished
[2026-01-10 22:16:08] 2026-01-11 03:15:38,641 | INFO     | [payload] failed_post thread has finished
[2026-01-10 22:16:08] 2026-01-11 03:15:38,689 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 22:16:08] 2026-01-11 03:15:38,830 | INFO     | [data] control thread has finished
[2026-01-10 22:16:08] 2026-01-11 03:15:38,850 | INFO     | all job control threads have been joined
[2026-01-10 22:16:08] 2026-01-11 03:15:38,928 | INFO     | [job] validate thread has finished
[2026-01-10 22:16:08] 2026-01-11 03:15:38,965 | INFO     | [job] job monitor thread has finished
[2026-01-10 22:16:08] 2026-01-11 03:15:39,169 | INFO     | [payload] control thread has finished
[2026-01-10 22:16:08] 2026-01-11 03:15:39,762 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 22:16:08] 2026-01-11 03:15:39,855 | INFO     | [job] control thread has finished
[2026-01-10 22:16:08] 2026-01-11 03:15:39,995 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 22:16:08] 2026-01-11 03:15:40,311 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 22:16:08] 2026-01-11 03:15:40,453 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 22:16:08] 2026-01-11 03:15:40,533 | INFO     | [data] copytool_out thread has finished
[2026-01-10 22:16:08] 2026-01-11 03:15:41,458 | INFO     | [job] queue monitor thread has finished
[2026-01-10 22:16:08] 2026-01-11 03:15:44,317 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 22:16:08] 2026-01-11 03:15:45,750 | INFO     | [monitor] cgroup control has ended
[2026-01-10 22:16:08] 2026-01-11 03:15:47,958 | INFO     | job.realtimelogging is not enabled
[2026-01-10 22:16:08] 2026-01-11 03:15:48,963 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 22:16:08] 2026-01-11 03:15:49,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747433822016)>', '<ExcThread(monitor, started 139747062167296)>']
[2026-01-10 22:16:08] 2026-01-11 03:15:54,613 | INFO     | all workflow threads have been joined
[2026-01-10 22:16:08] 2026-01-11 03:15:54,613 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 22:16:08] 2026-01-11 03:15:54,613 | INFO     | traces error code: 0
[2026-01-10 22:16:08] 2026-01-11 03:15:54,614 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 22:16:08] 2026-01-11 03:16:08,204 | INFO     | PID=319463 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 22:16:08] 2026-01-11 03:16:08,205 | INFO     | .. there are 13 such processes running
[2026-01-10 22:16:08] 2026-01-11 03:16:08,205 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 22:16:08] 2026-01-11 03:16:08,205 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 22:16:08] 2026-01-11 03:16:08,205 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 22:16:08] 2026-01-11 03:16:08,205 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 22:16:08] 2026-01-11 03:16:08,205 | INFO     | [monitor] control thread has ended
[2026-01-10 22:16:08] 2026-01-11 03:16:08,337 [wrapper] ==== pilot stdout END ====
[2026-01-10 22:16:08] 2026-01-11 03:16:08,339 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 22:16:08] 2026-01-11 03:16:08,341 [wrapper] pilotpid: 319463
[2026-01-10 22:16:08] 2026-01-11 03:16:08,343 [wrapper] Pilot exit status: 0
[2026-01-10 22:16:08] 2026-01-11 03:16:08,357 [wrapper] pandaids: 6963161485
[2026-01-10 22:16:08] 2026-01-11 03:16:08,425 [wrapper] cleanup supervisor_pilot  549947 319464
[2026-01-10 22:16:08] 2026-01-11 03:16:08,427 [wrapper] Test setup, not cleaning
[2026-01-10 22:16:08] 2026-01-11 03:16:08,429 [wrapper] apfmon messages muted
[2026-01-10 22:16:08] 2026-01-11 03:16:08,431 [wrapper] ==== wrapper stdout END ====
[2026-01-10 22:16:08] 2026-01-11 03:16:08,433 [wrapper] ==== wrapper stderr END ====
[2026-01-10 22:16:08]  *** Error codes and diagnostics ***
[2026-01-10 22:16:08]     "exeErrorCode": 0,
[2026-01-10 22:16:08]     "exeErrorDiag": "",
[2026-01-10 22:16:08]     "pilotErrorCode": 0,
[2026-01-10 22:16:08]     "pilotErrorDiag": "",
[2026-01-10 22:16:08]  *** Listing of results directory ***
[2026-01-10 22:16:08] total 437080
[2026-01-10 22:16:08] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-10 22:16:08] -rwx------. 1 boincer umatlas     36322 Jan  8 16:46 runpilot2-wrapper.sh
[2026-01-10 22:16:08] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:47 queuedata.json
[2026-01-10 22:16:08] -rw-r--r--. 1 boincer umatlas       100 Jan 10 19:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 22:16:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 19:44 run_atlas
[2026-01-10 22:16:08] -rw-r--r--. 1 boincer umatlas       105 Jan 10 19:44 job.xml
[2026-01-10 22:16:08] -rw-r--r--. 2 boincer umatlas 223485414 Jan 10 19:44 EVNT.47898824._001281.pool.root.1
[2026-01-10 22:16:08] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 19:44 start_atlas.sh
[2026-01-10 22:16:08] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 19:44 shared
[2026-01-10 22:16:08] -rw-r--r--. 2 boincer umatlas    592403 Jan 10 19:44 input.tar.gz
[2026-01-10 22:16:08] -rw-r--r--. 1 boincer umatlas         0 Jan 10 19:44 boinc_lockfile
[2026-01-10 22:16:08] -rw-r--r--. 1 boincer umatlas      2520 Jan 10 19:44 pandaJob.out
[2026-01-10 22:16:08] -rw-------. 1 boincer umatlas        57 Jan 10 19:44 setup.sh.local
[2026-01-10 22:16:08] -rw-------. 1 boincer umatlas    989540 Jan 10 19:44 agis_schedconf.cvmfs.json
[2026-01-10 22:16:08] -rw-------. 1 boincer umatlas   1516240 Jan 10 19:44 agis_ddmendpoints.agis.ALL.json
[2026-01-10 22:16:08] drwx------. 5 boincer umatlas      4096 Jan 10 19:44 pilot3
[2026-01-10 22:16:08] -rw-r--r--. 1 boincer umatlas      6859 Jan 10 22:13 init_data.xml
[2026-01-10 22:16:08] -rw-------. 1 boincer umatlas 216866927 Jan 10 22:14 HITS.47898826._033147.pool.root.1
[2026-01-10 22:16:08] -rw-r--r--. 1 boincer umatlas       529 Jan 10 22:14 boinc_task_state.xml
[2026-01-10 22:16:08] -rw-------. 1 boincer umatlas        95 Jan 10 22:15 pilot_heartbeat.json
[2026-01-10 22:16:08] -rw-------. 1 boincer umatlas      1036 Jan 10 22:15 memory_monitor_summary.json
[2026-01-10 22:16:08] -rw-------. 1 boincer umatlas    401913 Jan 10 22:15 log.47898826._033147.job.log.tgz.1
[2026-01-10 22:16:08] -rw-------. 1 boincer umatlas      7826 Jan 10 22:15 heartbeat.json
[2026-01-10 22:16:08] -rw-r--r--. 1 boincer umatlas        27 Jan 10 22:15 wrapper_checkpoint.txt
[2026-01-10 22:16:08] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 22:15 boinc_mmap_file
[2026-01-10 22:16:08] -rw-------. 1 boincer umatlas       822 Jan 10 22:16 pilotlog.txt
[2026-01-10 22:16:08] -rw-------. 1 boincer umatlas   1252966 Jan 10 22:16 log.47898826._033147.job.log.1
[2026-01-10 22:16:08] -rw-------. 1 boincer umatlas       357 Jan 10 22:16 output.list
[2026-01-10 22:16:08] -rw-r--r--. 1 boincer umatlas       620 Jan 10 22:16 runtime_log
[2026-01-10 22:16:08] -rw-------. 1 boincer umatlas   1669120 Jan 10 22:16 result.tar.gz
[2026-01-10 22:16:08] -rw-------. 1 boincer umatlas       655 Jan 10 22:16 XatNDmF1Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJIgKDmRmFJwn.diag
[2026-01-10 22:16:08] -rw-r--r--. 1 boincer umatlas      9352 Jan 10 22:16 runtime_log.err
[2026-01-10 22:16:08] -rw-r--r--. 1 boincer umatlas     21378 Jan 10 22:16 stderr.txt
[2026-01-10 22:16:08] HITS file was successfully produced:
[2026-01-10 22:16:08] -rw-------. 1 boincer umatlas 216866927 Jan 10 22:14 shared/HITS.pool.root.1
[2026-01-10 22:16:08]  *** Contents of shared directory: ***
[2026-01-10 22:16:08] total 432268
[2026-01-10 22:16:08] -rw-r--r--. 2 boincer umatlas 223485414 Jan 10 19:44 ATLAS.root_0
[2026-01-10 22:16:08] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 19:44 start_atlas.sh
[2026-01-10 22:16:08] -rw-r--r--. 2 boincer umatlas    592403 Jan 10 19:44 input.tar.gz
[2026-01-10 22:16:08] -rw-------. 1 boincer umatlas 216866927 Jan 10 22:14 HITS.pool.root.1
[2026-01-10 22:16:08] -rw-------. 1 boincer umatlas   1669120 Jan 10 22:16 result.tar.gz
22:16:09 (315757): run_atlas exited; CPU time 56299.383342
22:16:09 (315757): called boinc_finish(0)

</stderr_txt>
]]>

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