Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:12:59 (9352): wrapper (7.7.26015): starting
19:12:59 (9352): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 19:12:59] Arguments: --nthreads 8
[2026-01-10 19:12:59] Threads: 8
[2026-01-10 19:12:59] Checking for CVMFS
[2026-01-10 19:12:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 19:13:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 19:13:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 19:13:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 19:13:00] 2.11.2.0 2864 144653 91496 154997 1 82 16572760 20275200 1 130560 0 42732853 99.864 8459379 37375 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 19:13:00] CVMFS is ok
[2026-01-10 19:13:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 19:13:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 19:13:00] Further information can be found at the LHC@home message board.
[2026-01-10 19:13:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 19:13:00] Checking for apptainer binary...
[2026-01-10 19:13:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 19:13:00] Running /usr/bin/apptainer --version
[2026-01-10 19:13:00] apptainer version 1.3.2-1.el7
[2026-01-10 19:13:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 19:13:02] c-115-17.aglt2.org
[2026-01-10 19:13:02] apptainer works
[2026-01-10 19:13:02] Set ATHENA_PROC_NUMBER=8
[2026-01-10 19:13:02] Set ATHENA_CORE_NUMBER=8
[2026-01-10 19:13:02] Starting ATLAS job with PandaID=6965803213
[2026-01-10 19:13:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 20:05:33]  *** The last 200 lines of the pilot log: ***
[2026-01-10 20:05:33]  replicas=None
[2026-01-10 20:05:33]  scope=mc16_13TeV
[2026-01-10 20:05:33]  status=None
[2026-01-10 20:05:33]  status_code=0
[2026-01-10 20:05:33]  storage_token=
[2026-01-10 20:05:33]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6965803213/log.47962010._002665.job.log.tgz.1
[2026-01-10 20:05:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/20/21/log.47962010._002665.job.log.tgz.1
[2026-01-10 20:05:33]  workdir=None
[2026-01-10 20:05:33] ]
[2026-01-10 20:05:33] 2026-01-11 01:04:29,256 | INFO     | transferring file log.47962010._002665.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6965803213/log.47962010._002665.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 20:05:33] 2026-01-11 01:04:29,257 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6965803213/log.47962010._002665.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._002665.job
[2026-01-10 20:05:33] 2026-01-11 01:04:29,283 | INFO     | adding to output.list: log.47962010._002665.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/20/21/log.47962010._002665.job.log.tgz.
[2026-01-10 20:05:33] 2026-01-11 01:04:29,284 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 20:05:33] 2026-01-11 01:04:29,285 | INFO     | summary of transferred files:
[2026-01-10 20:05:33] 2026-01-11 01:04:29,285 | INFO     |  -- lfn=log.47962010._002665.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 20:05:33] 2026-01-11 01:04:29,285 | INFO     | stage-out finished correctly
[2026-01-10 20:05:33] 2026-01-11 01:04:29,382 | INFO     | time since job start (3067s) is within the limit (349056.0s)
[2026-01-10 20:05:33] 2026-01-11 01:04:29,822 | INFO     | monitor loop #233: job 0:6965803213 is in state 'finished'
[2026-01-10 20:05:33] 2026-01-11 01:04:29,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:05:33] 2026-01-11 01:04:30,310 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 20:05:33] 2026-01-11 01:04:31,388 | INFO     | time since job start (3069s) is within the limit (349056.0s)
[2026-01-10 20:05:33] 2026-01-11 01:04:32,304 | INFO     | job 6965803213 has state=finished
[2026-01-10 20:05:33] 2026-01-11 01:04:32,304 | INFO     | preparing for final server update for job 6965803213 in state='finished'
[2026-01-10 20:05:33] 2026-01-11 01:04:32,305 | INFO     | this job has now completed (state=finished)
[2026-01-10 20:05:33] 2026-01-11 01:04:32,305 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 20:05:33] 2026-01-11 01:04:32,305 | INFO     | log transfer has been attempted: DONE
[2026-01-10 20:05:33] 2026-01-11 01:04:32,305 | INFO     | job 6965803213 has finished - writing final server update
[2026-01-10 20:05:33] 2026-01-11 01:04:32,306 | INFO     | total number of processed events: 50 (read)
[2026-01-10 20:05:33] 2026-01-11 01:04:32,307 | INFO     | executing command: lscpu
[2026-01-10 20:05:33] 2026-01-11 01:04:32,325 | INFO     | monitor loop #234: job 0:6965803213 is in state 'finished'
[2026-01-10 20:05:33] 2026-01-11 01:04:32,326 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:05:33] 2026-01-11 01:04:32,336 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 20:05:33] 2026-01-11 01:04:33,394 | INFO     | time since job start (3071s) is within the limit (349056.0s)
[2026-01-10 20:05:33] 2026-01-11 01:04:34,830 | INFO     | monitor loop #235: job 0:6965803213 is in state 'finished'
[2026-01-10 20:05:33] 2026-01-11 01:04:34,830 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:05:33] 2026-01-11 01:04:35,400 | INFO     | time since job start (3073s) is within the limit (349056.0s)
[2026-01-10 20:05:33] 2026-01-11 01:04:36,513 | INFO     | PID=13428 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 20:05:33] 2026-01-11 01:04:37,333 | INFO     | monitor loop #236: job 0:6965803213 is in state 'finished'
[2026-01-10 20:05:33] 2026-01-11 01:04:37,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:05:33] 2026-01-11 01:04:37,513 | INFO     | time since job start (3075s) is within the limit (349056.0s)
[2026-01-10 20:05:33] 2026-01-11 01:04:38,668 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 20:05:33] 2026-01-11 01:04:38,672 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2026-01-10 20:05:33] 2026-01-11 01:04:38,674 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965803213/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 20:05:33] 2026-01-11 01:04:38,675 | INFO     | extracted standard info from prmon json
[2026-01-10 20:05:33] 2026-01-11 01:04:38,675 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 20:05:33] 2026-01-11 01:04:38,675 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 20:05:33] 2026-01-11 01:04:38,677 | INFO     | fitting pss+swap vs Time
[2026-01-10 20:05:33] 2026-01-11 01:04:38,677 | INFO     | sum of square deviations: 24638154.046511613
[2026-01-10 20:05:33] 2026-01-11 01:04:38,677 | INFO     | sum of deviations: -325755664.4418609
[2026-01-10 20:05:33] 2026-01-11 01:04:38,678 | INFO     | mean x: 1768092020.372093
[2026-01-10 20:05:33] 2026-01-11 01:04:38,678 | INFO     | mean y: 2980151.465116279
[2026-01-10 20:05:33] 2026-01-11 01:04:38,678 | INFO     | intersect: 23379974621.23593
[2026-01-10 20:05:33] 2026-01-11 01:04:38,678 | INFO     | chi2: 0.24210191611390103
[2026-01-10 20:05:33] 2026-01-11 01:04:38,678 | INFO     | current memory leak: -13.22 B/s (using 43 data points, chi2=0.24)
[2026-01-10 20:05:33] 2026-01-11 01:04:38,679 | INFO     | could have reported an average CPU frequency of 1905 MHz (5 samples)
[2026-01-10 20:05:33] 2026-01-11 01:04:38,679 | INFO     | ..............................
[2026-01-10 20:05:33] 2026-01-11 01:04:38,679 | INFO     | . Timing measurements:
[2026-01-10 20:05:33] 2026-01-11 01:04:38,679 | INFO     | . get job = 0 s
[2026-01-10 20:05:33] 2026-01-11 01:04:38,679 | INFO     | . initial setup = 2 s
[2026-01-10 20:05:33] 2026-01-11 01:04:38,679 | INFO     | . payload setup = 9 s
[2026-01-10 20:05:33] 2026-01-11 01:04:38,680 | INFO     | . stage-in = 0 s
[2026-01-10 20:05:33] 2026-01-11 01:04:38,680 | INFO     | . payload execution = 3036 s
[2026-01-10 20:05:33] 2026-01-11 01:04:38,680 | INFO     | . stage-out = 0 s
[2026-01-10 20:05:33] 2026-01-11 01:04:38,680 | INFO     | . log creation = 0 s
[2026-01-10 20:05:33] 2026-01-11 01:04:38,680 | INFO     | ..............................
[2026-01-10 20:05:33] 2026-01-11 01:04:38,763 | INFO     | 
[2026-01-10 20:05:33] 2026-01-11 01:04:38,763 | INFO     | job summary report
[2026-01-10 20:05:33] 2026-01-11 01:04:38,763 | INFO     | --------------------------------------------------
[2026-01-10 20:05:33] 2026-01-11 01:04:38,763 | INFO     | PanDA job id: 6965803213
[2026-01-10 20:05:33] 2026-01-11 01:04:38,764 | INFO     | task id: 47962010
[2026-01-10 20:05:33] 2026-01-11 01:04:38,764 | INFO     | errors: (none)
[2026-01-10 20:05:33] 2026-01-11 01:04:38,764 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 20:05:33] 2026-01-11 01:04:38,764 | INFO     | pilot state: finished 
[2026-01-10 20:05:33] 2026-01-11 01:04:38,764 | INFO     | transexitcode: 0
[2026-01-10 20:05:33] 2026-01-11 01:04:38,764 | INFO     | exeerrorcode: 0
[2026-01-10 20:05:33] 2026-01-11 01:04:38,765 | INFO     | exeerrordiag: 
[2026-01-10 20:05:33] 2026-01-11 01:04:38,765 | INFO     | exitcode: 0
[2026-01-10 20:05:33] 2026-01-11 01:04:38,765 | INFO     | exitmsg: OK
[2026-01-10 20:05:33] 2026-01-11 01:04:38,765 | INFO     | cpuconsumptiontime: 20022 s
[2026-01-10 20:05:33] 2026-01-11 01:04:38,765 | INFO     | nevents: 50
[2026-01-10 20:05:33] 2026-01-11 01:04:38,765 | INFO     | neventsw: 0
[2026-01-10 20:05:33] 2026-01-11 01:04:38,766 | INFO     | pid: 19894
[2026-01-10 20:05:33] 2026-01-11 01:04:38,766 | INFO     | pgrp: 19894
[2026-01-10 20:05:33] 2026-01-11 01:04:38,766 | INFO     | corecount: 8
[2026-01-10 20:05:33] 2026-01-11 01:04:38,766 | INFO     | event service: False
[2026-01-10 20:05:33] 2026-01-11 01:04:38,766 | INFO     | sizes: {0: 2284569, 6: 2284831, 11: 2284859, 3049: 2311068, 3050: 2320117, 3051: 2320117, 3060: 2320523}
[2026-01-10 20:05:33] 2026-01-11 01:04:38,766 | INFO     | --------------------------------------------------
[2026-01-10 20:05:33] 2026-01-11 01:04:38,767 | INFO     | 
[2026-01-10 20:05:33] 2026-01-11 01:04:38,767 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 20:05:33] 2026-01-11 01:04:38,796 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 20:05:33] 2026-01-11 01:04:38,797 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 20:05:33] 2026-01-11 01:04:38,797 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 20:05:33] 2026-01-11 01:04:38,797 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 20:05:33] 2026-01-11 01:04:38,797 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 20:05:33] 2026-01-11 01:04:38,797 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 20:05:33] 2026-01-11 01:04:38,798 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 20:05:33] 2026-01-11 01:04:38,798 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 20:05:33] 2026-01-11 01:04:38,798 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 20:05:33] 2026-01-11 01:04:38,798 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 20:05:33] 2026-01-11 01:04:38,798 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 20:05:33] 2026-01-11 01:04:38,798 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 20:05:33] 2026-01-11 01:04:38,799 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 20:05:33] 2026-01-11 01:04:38,799 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 20:05:33] 2026-01-11 01:04:38,799 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 20:05:33] 2026-01-11 01:04:38,799 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 20:05:33] 2026-01-11 01:04:38,799 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 20:05:33] 2026-01-11 01:04:38,799 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 20:05:33] 2026-01-11 01:04:38,800 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 20:05:33] 2026-01-11 01:04:38,800 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 20:05:33] 2026-01-11 01:04:38,800 | INFO     | job 6965803213 has completed (purged errors)
[2026-01-10 20:05:33] 2026-01-11 01:04:38,800 | INFO     | overall cleanup function is called
[2026-01-10 20:05:33] 2026-01-11 01:04:39,814 | INFO     | --- collectZombieJob: --- 10, [19894]
[2026-01-10 20:05:33] 2026-01-11 01:04:39,815 | INFO     | zombie collector waiting for pid 19894
[2026-01-10 20:05:33] 2026-01-11 01:04:39,815 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 20:05:33] 2026-01-11 01:04:39,815 | INFO     | collected zombie processes
[2026-01-10 20:05:33] 2026-01-11 01:04:39,815 | INFO     | will attempt to kill all subprocesses of pid=19894
[2026-01-10 20:05:33] 2026-01-11 01:04:39,903 | INFO     | process IDs to be killed: [19894] (in reverse order)
[2026-01-10 20:05:33] 2026-01-11 01:04:39,961 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 20:05:33] 2026-01-11 01:04:39,961 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 20:05:33] 2026-01-11 01:04:39,965 | INFO     | did not find any defunct processes belonging to 19894
[2026-01-10 20:05:33] 2026-01-11 01:04:39,968 | INFO     | did not find any defunct processes belonging to 19894
[2026-01-10 20:05:33] 2026-01-11 01:04:39,968 | INFO     | ready for new job
[2026-01-10 20:05:33] 2026-01-11 01:04:39,969 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 20:05:33] 2026-01-11 01:04:39,970 | INFO     | ***************************************
[2026-01-10 20:05:33] 2026-01-11 01:04:39,970 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 20:05:33] 2026-01-11 01:04:39,970 | INFO     | ***************************************
[2026-01-10 20:05:33] 2026-01-11 01:04:39,970 | INFO     | 
[2026-01-10 20:05:33] 2026-01-11 01:04:39,971 | INFO     | architecture information:
[2026-01-10 20:05:33] 2026-01-11 01:04:39,972 | INFO     | executing command: cat /etc/os-release
[2026-01-10 20:05:33] 2026-01-11 01:04:39,990 | INFO     | cat /etc/os-release:
[2026-01-10 20:05:33] NAME="CentOS Linux"
[2026-01-10 20:05:33] VERSION="7 (Core)"
[2026-01-10 20:05:33] ID="centos"
[2026-01-10 20:05:33] ID_LIKE="rhel fedora"
[2026-01-10 20:05:33] VERSION_ID="7"
[2026-01-10 20:05:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 20:05:33] ANSI_COLOR="0;31"
[2026-01-10 20:05:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 20:05:33] HOME_URL="https://www.centos.org/"
[2026-01-10 20:05:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 20:05:33] 
[2026-01-10 20:05:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 20:05:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 20:05:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 20:05:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 20:05:33] 
[2026-01-10 20:05:33] 2026-01-11 01:04:39,991 | INFO     | ***************************************
[2026-01-10 20:05:33] 2026-01-11 01:04:40,494 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 20:05:33] 2026-01-11 01:04:40,514 | INFO     | sufficient remaining disk space (18372100096 B)
[2026-01-10 20:05:33] 2026-01-11 01:04:40,514 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 20:05:33] 2026-01-11 01:04:40,515 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 20:05:33] 2026-01-11 01:04:40,515 | INFO     | update_server=False
[2026-01-10 20:05:33] 2026-01-11 01:04:40,515 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 20:05:33] 2026-01-11 01:04:40,516 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:05:33] 2026-01-11 01:04:40,516 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 20:05:33] 2026-01-11 01:04:40,842 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:05:33] 2026-01-11 01:04:40,842 | INFO     | aborting loop
[2026-01-10 20:05:33] 2026-01-11 01:04:40,897 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 20:05:33] 2026-01-11 01:04:41,214 | INFO     | all payload control threads have been joined
[2026-01-10 20:05:33] 2026-01-11 01:04:41,323 | INFO     | all data control threads have been joined
[2026-01-10 20:05:33] 2026-01-11 01:04:41,517 | INFO     | [job] retrieve thread has finished
[2026-01-10 20:05:33] 2026-01-11 01:04:41,520 | INFO     | [job] queue monitor thread has finished
[2026-01-10 20:05:33] 2026-01-11 01:04:41,647 | INFO     | all job control threads have been joined
[2026-01-10 20:05:33] 2026-01-11 01:04:41,810 | INFO     | [payload] failed_post thread has finished
[2026-01-10 20:05:33] 2026-01-11 01:04:41,848 | INFO     | [job] job monitor thread has finished
[2026-01-10 20:05:33] 2026-01-11 01:04:42,172 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 20:05:33] 2026-01-11 01:04:42,172 | INFO     | [job] validate thread has finished
[2026-01-10 20:05:33] 2026-01-11 01:04:42,219 | INFO     | [payload] control thread has finished
[2026-01-10 20:05:33] 2026-01-11 01:04:42,329 | INFO     | [data] control thread has finished
[2026-01-10 20:05:33] 2026-01-11 01:04:42,398 | INFO     | [payload] validate_post thread has finished
[2026-01-10 20:05:33] 2026-01-11 01:04:42,497 | INFO     | [data] copytool_in thread has finished
[2026-01-10 20:05:33] 2026-01-11 01:04:42,522 | INFO     | [data] copytool_out thread has finished
[2026-01-10 20:05:33] 2026-01-11 01:04:42,537 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 20:05:33] 2026-01-11 01:04:42,653 | INFO     | [job] control thread has finished
[2026-01-10 20:05:33] 2026-01-11 01:04:42,841 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 20:05:33] 2026-01-11 01:04:44,903 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 20:05:33] 2026-01-11 01:04:51,241 | INFO     | job.realtimelogging is not enabled
[2026-01-10 20:05:33] 2026-01-11 01:04:52,247 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 20:05:33] 2026-01-11 01:05:10,736 | INFO     | PID=13428 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 20:05:33] 2026-01-11 01:05:10,737 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 20:05:33] 2026-01-11 01:05:10,737 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 20:05:33] 2026-01-11 01:05:10,737 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 20:05:33] 2026-01-11 01:05:26,389 | INFO     | [monitor] cgroup control has ended
[2026-01-10 20:05:33] 2026-01-11 01:05:27,652 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139748665288512)>', '<ExcThread(monitor, started 139747942975232)>']
[2026-01-10 20:05:33] 2026-01-11 01:05:27,820 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 20:05:33] 2026-01-11 01:05:27,820 | INFO     | [monitor] control thread has ended
[2026-01-10 20:05:33] 2026-01-11 01:05:32,675 | INFO     | all workflow threads have been joined
[2026-01-10 20:05:33] 2026-01-11 01:05:32,675 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 20:05:33] 2026-01-11 01:05:32,675 | INFO     | traces error code: 0
[2026-01-10 20:05:33] 2026-01-11 01:05:32,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 20:05:33] 2026-01-11 01:05:32,791 [wrapper] ==== pilot stdout END ====
[2026-01-10 20:05:33] 2026-01-11 01:05:32,796 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 20:05:33] 2026-01-11 01:05:32,800 [wrapper] pilotpid: 13428
[2026-01-10 20:05:33] 2026-01-11 01:05:32,805 [wrapper] Pilot exit status: 0
[2026-01-10 20:05:33] 2026-01-11 01:05:32,822 [wrapper] pandaids: 6965803213
[2026-01-10 20:05:33] 2026-01-11 01:05:32,874 [wrapper] cleanup supervisor_pilot 11291 13429
[2026-01-10 20:05:33] 2026-01-11 01:05:32,878 [wrapper] Test setup, not cleaning
[2026-01-10 20:05:33] 2026-01-11 01:05:32,883 [wrapper] apfmon messages muted
[2026-01-10 20:05:33] 2026-01-11 01:05:32,887 [wrapper] ==== wrapper stdout END ====
[2026-01-10 20:05:33] 2026-01-11 01:05:32,892 [wrapper] ==== wrapper stderr END ====
[2026-01-10 20:05:33]  *** Error codes and diagnostics ***
[2026-01-10 20:05:33]     "exeErrorCode": 0,
[2026-01-10 20:05:33]     "exeErrorDiag": "",
[2026-01-10 20:05:33]     "pilotErrorCode": 0,
[2026-01-10 20:05:33]     "pilotErrorDiag": "",
[2026-01-10 20:05:33]  *** Listing of results directory ***
[2026-01-10 20:05:33] total 434044
[2026-01-10 20:05:33] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 20:05:33] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 18:03 queuedata.json
[2026-01-10 20:05:33] -rwx------ 1 boincer umatlas     36322 Jan 10 18:04 runpilot2-wrapper.sh
[2026-01-10 20:05:33] -rw-r--r-- 1 boincer umatlas       100 Jan 10 19:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 20:05:33] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 19:12 run_atlas
[2026-01-10 20:05:33] -rw-r--r-- 1 boincer umatlas       105 Jan 10 19:12 job.xml
[2026-01-10 20:05:33] -rw-r--r-- 2 boincer umatlas 392179395 Jan 10 19:12 EVNT.47962006._000036.pool.root.1
[2026-01-10 20:05:33] -rw-r--r-- 2 boincer umatlas    592624 Jan 10 19:12 input.tar.gz
[2026-01-10 20:05:33] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 19:12 start_atlas.sh
[2026-01-10 20:05:33] drwxrwx--x 2 boincer umatlas      4096 Jan 10 19:12 shared
[2026-01-10 20:05:33] -rw-r--r-- 1 boincer umatlas         0 Jan 10 19:12 boinc_lockfile
[2026-01-10 20:05:33] -rw-r--r-- 1 boincer umatlas      2890 Jan 10 19:13 pandaJob.out
[2026-01-10 20:05:33] -rw------- 1 boincer umatlas        57 Jan 10 19:13 setup.sh.local
[2026-01-10 20:05:33] -rw------- 1 boincer umatlas    989548 Jan 10 19:13 agis_schedconf.cvmfs.json
[2026-01-10 20:05:33] -rw------- 1 boincer umatlas   1516240 Jan 10 19:13 agis_ddmendpoints.agis.ALL.json
[2026-01-10 20:05:33] drwx------ 5 boincer umatlas      4096 Jan 10 19:13 pilot3
[2026-01-10 20:05:33] -rw-r--r-- 1 boincer umatlas       529 Jan 10 19:57 boinc_task_state.xml
[2026-01-10 20:05:33] -rw-r--r-- 1 boincer umatlas      5910 Jan 10 20:02 init_data.xml
[2026-01-10 20:05:33] -rw------- 1 boincer umatlas  45031041 Jan 10 20:04 HITS.47962010._002665.pool.root.1
[2026-01-10 20:05:33] -rw------- 1 boincer umatlas      1047 Jan 10 20:04 memory_monitor_summary.json
[2026-01-10 20:05:33] -rw------- 1 boincer umatlas   1193239 Jan 10 20:04 log.47962010._002665.job.log.tgz.1
[2026-01-10 20:05:33] -rw------- 1 boincer umatlas      8609 Jan 10 20:04 heartbeat.json
[2026-01-10 20:05:33] -rw-r--r-- 1 boincer umatlas        27 Jan 10 20:05 wrapper_checkpoint.txt
[2026-01-10 20:05:33] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 20:05 boinc_mmap_file
[2026-01-10 20:05:33] -rw------- 1 boincer umatlas        95 Jan 10 20:05 pilot_heartbeat.json
[2026-01-10 20:05:33] -rw------- 1 boincer umatlas      4818 Jan 10 20:05 pilotlog.txt
[2026-01-10 20:05:33] -rw------- 1 boincer umatlas    474661 Jan 10 20:05 log.47962010._002665.job.log.1
[2026-01-10 20:05:33] -rw------- 1 boincer umatlas       353 Jan 10 20:05 output.list
[2026-01-10 20:05:33] -rw-r--r-- 1 boincer umatlas       620 Jan 10 20:05 runtime_log
[2026-01-10 20:05:33] -rw------- 1 boincer umatlas   1689600 Jan 10 20:05 result.tar.gz
[2026-01-10 20:05:33] -rw-r--r-- 1 boincer umatlas      9342 Jan 10 20:05 runtime_log.err
[2026-01-10 20:05:33] -rw------- 1 boincer umatlas       659 Jan 10 20:05 ETaMDm1Bxy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXvmKDmhHVztn.diag
[2026-01-10 20:05:33] -rw-r--r-- 1 boincer umatlas     22020 Jan 10 20:05 stderr.txt
[2026-01-10 20:05:33] HITS file was successfully produced:
[2026-01-10 20:05:33] -rw------- 1 boincer umatlas 45031041 Jan 10 20:04 shared/HITS.pool.root.1
[2026-01-10 20:05:33]  *** Contents of shared directory: ***
[2026-01-10 20:05:33] total 429212
[2026-01-10 20:05:33] -rw-r--r-- 2 boincer umatlas 392179395 Jan 10 19:12 ATLAS.root_0
[2026-01-10 20:05:33] -rw-r--r-- 2 boincer umatlas    592624 Jan 10 19:12 input.tar.gz
[2026-01-10 20:05:33] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 19:12 start_atlas.sh
[2026-01-10 20:05:33] -rw------- 1 boincer umatlas  45031041 Jan 10 20:04 HITS.pool.root.1
[2026-01-10 20:05:33] -rw------- 1 boincer umatlas   1689600 Jan 10 20:05 result.tar.gz
20:05:35 (9352): run_atlas exited; CPU time 19870.250899
20:05:35 (9352): called boinc_finish(0)

</stderr_txt>
]]>

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