Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:11:07 (803930): wrapper (7.7.26015): starting
19:11:07 (803930): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 19:11:07] Arguments: --nthreads 11
[2026-01-10 19:11:07] Threads: 11
[2026-01-10 19:11:07] Checking for CVMFS
[2026-01-10 19:11:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 19:11:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 19:11:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 19:11:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 19:11:08] 2.13.3.0 15397 95413 240404 154997 3 700 31579185 32935936 21329 16776704 0 685273557 99.532 821896641 36166 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 19:11:08] CVMFS is ok
[2026-01-10 19:11:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 19:11:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 19:11:08] Further information can be found at the LHC@home message board.
[2026-01-10 19:11:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 19:11:08] Checking for apptainer binary...
[2026-01-10 19:11:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 19:11:08] Running /usr/bin/apptainer --version
[2026-01-10 19:11:08] apptainer version 1.4.5-2.el9
[2026-01-10 19:11:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 19:11:09] c7-16-8.aglt2.org
[2026-01-10 19:11:09] apptainer works
[2026-01-10 19:11:09] Set ATHENA_PROC_NUMBER=11
[2026-01-10 19:11:09] Set ATHENA_CORE_NUMBER=11
[2026-01-10 19:11:09] Starting ATLAS job with PandaID=6963157028
[2026-01-10 19:11:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 21:59:10]  *** The last 200 lines of the pilot log: ***
[2026-01-10 21:59:10] 2026-01-11 02:58:22,533 | INFO     | .. there are 20 such processes running
[2026-01-10 21:59:10] 2026-01-11 02:58:22,998 | INFO     | monitor loop #672: job 0:6963157028 is in state 'finished'
[2026-01-10 21:59:10] 2026-01-11 02:58:22,999 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:59:10] 2026-01-11 02:58:23,533 | INFO     | time since job start (9995s) is within the limit (349056.0s)
[2026-01-10 21:59:10] 2026-01-11 02:58:25,504 | INFO     | monitor loop #673: job 0:6963157028 is in state 'finished'
[2026-01-10 21:59:10] 2026-01-11 02:58:25,505 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:59:10] 2026-01-11 02:58:25,539 | INFO     | time since job start (9997s) is within the limit (349056.0s)
[2026-01-10 21:59:10] 2026-01-11 02:58:25,618 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 21:59:10] 2026-01-11 02:58:25,624 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3267.0824166666657
[2026-01-10 21:59:10] 2026-01-11 02:58:25,640 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963157028/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 21:59:10] 2026-01-11 02:58:25,641 | INFO     | extracted standard info from prmon json
[2026-01-10 21:59:10] 2026-01-11 02:58:25,641 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 21:59:10] 2026-01-11 02:58:25,642 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 21:59:10] 2026-01-11 02:58:25,642 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 21:59:10] 2026-01-11 02:58:25,642 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 21:59:10] 2026-01-11 02:58:25,645 | INFO     | fitting pss+swap vs Time
[2026-01-10 21:59:10] 2026-01-11 02:58:25,645 | INFO     | sum of square deviations: 1342808256.6993902
[2026-01-10 21:59:10] 2026-01-11 02:58:25,646 | INFO     | sum of deviations: -3982829090.5276117
[2026-01-10 21:59:10] 2026-01-11 02:58:25,647 | INFO     | mean x: 1768095336.0429447
[2026-01-10 21:59:10] 2026-01-11 02:58:25,647 | INFO     | mean y: 2704623.9325153376
[2026-01-10 21:59:10] 2026-01-11 02:58:25,647 | INFO     | intersect: 5246954131.697127
[2026-01-10 21:59:10] 2026-01-11 02:58:25,647 | INFO     | chi2: 3.6081562704674295
[2026-01-10 21:59:10] 2026-01-11 02:58:25,648 | INFO     | sum of square deviations: 1222984889.189868
[2026-01-10 21:59:10] 2026-01-11 02:58:25,648 | INFO     | sum of deviations: 7851911931.34177
[2026-01-10 21:59:10] 2026-01-11 02:58:25,649 | INFO     | mean x: 1768095183.544304
[2026-01-10 21:59:10] 2026-01-11 02:58:25,649 | INFO     | mean y: 2719338.879746835
[2026-01-10 21:59:10] 2026-01-11 02:58:25,649 | INFO     | intersect: -11348956213.396122
[2026-01-10 21:59:10] 2026-01-11 02:58:25,649 | INFO     | chi2: 2.9381173929829254
[2026-01-10 21:59:10] 2026-01-11 02:58:25,649 | INFO     | current chi2=2.9381173929829254 (change=18.57011801203671 %)
[2026-01-10 21:59:10] 2026-01-11 02:58:25,649 | INFO     | right removable region: 157
[2026-01-10 21:59:10] 2026-01-11 02:58:25,650 | INFO     | sum of square deviations: 1222980619.189868
[2026-01-10 21:59:10] 2026-01-11 02:58:25,650 | INFO     | sum of deviations: -46816840251.93671
[2026-01-10 21:59:10] 2026-01-11 02:58:25,651 | INFO     | mean x: 1768095488.544304
[2026-01-10 21:59:10] 2026-01-11 02:58:25,651 | INFO     | mean y: 2758720.3481012657
[2026-01-10 21:59:10] 2026-01-11 02:58:25,651 | INFO     | intersect: 67687105257.40272
[2026-01-10 21:59:10] 2026-01-11 02:58:25,651 | INFO     | chi2: 0.9179012875688273
[2026-01-10 21:59:10] 2026-01-11 02:58:25,651 | INFO     | current chi2=0.9179012875688273 (change=74.56037879839624 %)
[2026-01-10 21:59:10] 2026-01-11 02:58:25,651 | INFO     | sum of square deviations: 1110501956.6797373
[2026-01-10 21:59:10] 2026-01-11 02:58:25,652 | INFO     | sum of deviations: -50372609048.94117
[2026-01-10 21:59:10] 2026-01-11 02:58:25,652 | INFO     | mean x: 1768095641.0457516
[2026-01-10 21:59:10] 2026-01-11 02:58:25,652 | INFO     | mean y: 2763445.705882353
[2026-01-10 21:59:10] 2026-01-11 02:58:25,653 | INFO     | intersect: 80203964309.7041
[2026-01-10 21:59:10] 2026-01-11 02:58:25,653 | INFO     | chi2: 0.8383833682488538
[2026-01-10 21:59:10] 2026-01-11 02:58:25,653 | INFO     | current chi2=0.8383833682488538 (change=8.663014247489103 %)
[2026-01-10 21:59:10] 2026-01-11 02:58:25,653 | INFO     | left removable region: 20
[2026-01-10 21:59:10] 2026-01-11 02:58:25,653 | INFO     | sum of square deviations: 797251584.6423341
[2026-01-10 21:59:10] 2026-01-11 02:58:25,654 | INFO     | sum of deviations: -31449376971.77373
[2026-01-10 21:59:10] 2026-01-11 02:58:25,654 | INFO     | mean x: 1768095763.051095
[2026-01-10 21:59:10] 2026-01-11 02:58:25,654 | INFO     | mean y: 2771869.8248175182
[2026-01-10 21:59:10] 2026-01-11 02:58:25,654 | INFO     | intersect: 69749275038.37701
[2026-01-10 21:59:10] 2026-01-11 02:58:25,655 | INFO     | chi2: 0.1173247208746252
[2026-01-10 21:59:10] 2026-01-11 02:58:25,655 | INFO     | current memory leak: -39.45 B/s (using 137 data points, chi2=0.12)
[2026-01-10 21:59:10] 2026-01-11 02:58:25,655 | INFO     | could have reported an average CPU frequency of 3193 MHz (9 samples)
[2026-01-10 21:59:10] 2026-01-11 02:58:25,655 | INFO     | ..............................
[2026-01-10 21:59:10] 2026-01-11 02:58:25,655 | INFO     | . Timing measurements:
[2026-01-10 21:59:10] 2026-01-11 02:58:25,656 | INFO     | . get job = 0 s
[2026-01-10 21:59:10] 2026-01-11 02:58:25,656 | INFO     | . initial setup = 4 s
[2026-01-10 21:59:10] 2026-01-11 02:58:25,656 | INFO     | . payload setup = 24 s
[2026-01-10 21:59:10] 2026-01-11 02:58:25,656 | INFO     | . stage-in = 0 s
[2026-01-10 21:59:10] 2026-01-11 02:58:25,656 | INFO     | . payload execution = 9920 s
[2026-01-10 21:59:10] 2026-01-11 02:58:25,656 | INFO     | . stage-out = 0 s
[2026-01-10 21:59:10] 2026-01-11 02:58:25,656 | INFO     | . log creation = 0 s
[2026-01-10 21:59:10] 2026-01-11 02:58:25,656 | INFO     | ..............................
[2026-01-10 21:59:10] 2026-01-11 02:58:25,834 | INFO     | 
[2026-01-10 21:59:10] 2026-01-11 02:58:25,835 | INFO     | job summary report
[2026-01-10 21:59:10] 2026-01-11 02:58:25,835 | INFO     | --------------------------------------------------
[2026-01-10 21:59:10] 2026-01-11 02:58:25,835 | INFO     | PanDA job id: 6963157028
[2026-01-10 21:59:10] 2026-01-11 02:58:25,835 | INFO     | task id: 47898826
[2026-01-10 21:59:10] 2026-01-11 02:58:25,835 | INFO     | errors: (none)
[2026-01-10 21:59:10] 2026-01-11 02:58:25,835 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 21:59:10] 2026-01-11 02:58:25,835 | INFO     | pilot state: finished 
[2026-01-10 21:59:10] 2026-01-11 02:58:25,835 | INFO     | transexitcode: 0
[2026-01-10 21:59:10] 2026-01-11 02:58:25,835 | INFO     | exeerrorcode: 0
[2026-01-10 21:59:10] 2026-01-11 02:58:25,835 | INFO     | exeerrordiag: 
[2026-01-10 21:59:10] 2026-01-11 02:58:25,835 | INFO     | exitcode: 0
[2026-01-10 21:59:10] 2026-01-11 02:58:25,836 | INFO     | exitmsg: OK
[2026-01-10 21:59:10] 2026-01-11 02:58:25,836 | INFO     | cpuconsumptiontime: 43454 s
[2026-01-10 21:59:10] 2026-01-11 02:58:25,836 | INFO     | nevents: 400
[2026-01-10 21:59:10] 2026-01-11 02:58:25,836 | INFO     | neventsw: 0
[2026-01-10 21:59:10] 2026-01-11 02:58:25,836 | INFO     | pid: 819278
[2026-01-10 21:59:10] 2026-01-11 02:58:25,836 | INFO     | pgrp: 819278
[2026-01-10 21:59:10] 2026-01-11 02:58:25,836 | INFO     | corecount: 11
[2026-01-10 21:59:10] 2026-01-11 02:58:25,836 | INFO     | event service: False
[2026-01-10 21:59:10] 2026-01-11 02:58:25,836 | INFO     | sizes: {0: 2283744, 1: 2283999, 12: 2283999, 19: 2284289, 23: 2284317, 9949: 2313280, 9950: 2322334, 9957: 2322536}
[2026-01-10 21:59:10] 2026-01-11 02:58:25,836 | INFO     | --------------------------------------------------
[2026-01-10 21:59:10] 2026-01-11 02:58:25,836 | INFO     | 
[2026-01-10 21:59:10] 2026-01-11 02:58:25,837 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 21:59:10] 2026-01-11 02:58:25,857 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 21:59:10] 2026-01-11 02:58:25,858 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 21:59:10] 2026-01-11 02:58:25,858 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 21:59:10] 2026-01-11 02:58:25,858 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 21:59:10] 2026-01-11 02:58:25,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 21:59:10] 2026-01-11 02:58:25,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 21:59:10] 2026-01-11 02:58:25,858 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 21:59:10] 2026-01-11 02:58:25,858 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 21:59:10] 2026-01-11 02:58:25,858 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 21:59:10] 2026-01-11 02:58:25,858 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 21:59:10] 2026-01-11 02:58:25,858 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 21:59:10] 2026-01-11 02:58:25,858 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 21:59:10] 2026-01-11 02:58:25,858 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 21:59:10] 2026-01-11 02:58:25,858 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 21:59:10] 2026-01-11 02:58:25,858 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 21:59:10] 2026-01-11 02:58:25,858 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 21:59:10] 2026-01-11 02:58:25,859 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 21:59:10] 2026-01-11 02:58:25,859 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 21:59:10] 2026-01-11 02:58:25,859 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 21:59:10] 2026-01-11 02:58:25,859 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 21:59:10] 2026-01-11 02:58:25,859 | INFO     | job 6963157028 has completed (purged errors)
[2026-01-10 21:59:10] 2026-01-11 02:58:25,859 | INFO     | overall cleanup function is called
[2026-01-10 21:59:10] 2026-01-11 02:58:26,868 | INFO     | --- collectZombieJob: --- 10, [819278]
[2026-01-10 21:59:10] 2026-01-11 02:58:26,869 | INFO     | zombie collector waiting for pid 819278
[2026-01-10 21:59:10] 2026-01-11 02:58:26,869 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 21:59:10] 2026-01-11 02:58:26,869 | INFO     | collected zombie processes
[2026-01-10 21:59:10] 2026-01-11 02:58:26,869 | INFO     | will attempt to kill all subprocesses of pid=819278
[2026-01-10 21:59:10] 2026-01-11 02:58:27,275 | INFO     | process IDs to be killed: [819278] (in reverse order)
[2026-01-10 21:59:10] 2026-01-11 02:58:27,404 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 21:59:10] 2026-01-11 02:58:27,404 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 21:59:10] 2026-01-11 02:58:27,422 | INFO     | did not find any defunct processes belonging to 819278
[2026-01-10 21:59:10] 2026-01-11 02:58:27,439 | INFO     | did not find any defunct processes belonging to 819278
[2026-01-10 21:59:10] 2026-01-11 02:58:27,439 | INFO     | ready for new job
[2026-01-10 21:59:10] 2026-01-11 02:58:27,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 21:59:10] 2026-01-11 02:58:27,441 | INFO     | ***************************************
[2026-01-10 21:59:10] 2026-01-11 02:58:27,442 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 21:59:10] 2026-01-11 02:58:27,442 | INFO     | ***************************************
[2026-01-10 21:59:10] 2026-01-11 02:58:27,442 | INFO     | 
[2026-01-10 21:59:10] 2026-01-11 02:58:27,447 | INFO     | architecture information:
[2026-01-10 21:59:10] 2026-01-11 02:58:27,447 | INFO     | executing command: cat /etc/os-release
[2026-01-10 21:59:10] 2026-01-11 02:58:27,461 | INFO     | cat /etc/os-release:
[2026-01-10 21:59:10] NAME="CentOS Linux"
[2026-01-10 21:59:10] VERSION="7 (Core)"
[2026-01-10 21:59:10] ID="centos"
[2026-01-10 21:59:10] ID_LIKE="rhel fedora"
[2026-01-10 21:59:10] VERSION_ID="7"
[2026-01-10 21:59:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 21:59:10] ANSI_COLOR="0;31"
[2026-01-10 21:59:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 21:59:10] HOME_URL="https://www.centos.org/"
[2026-01-10 21:59:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 21:59:10] 
[2026-01-10 21:59:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 21:59:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 21:59:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 21:59:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 21:59:10] 
[2026-01-10 21:59:10] 2026-01-11 02:58:27,462 | INFO     | ***************************************
[2026-01-10 21:59:10] 2026-01-11 02:58:27,965 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 21:59:10] 2026-01-11 02:58:27,987 | INFO     | sufficient remaining disk space (76551290880 B)
[2026-01-10 21:59:10] 2026-01-11 02:58:27,987 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 21:59:10] 2026-01-11 02:58:27,987 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 21:59:10] 2026-01-11 02:58:27,987 | INFO     | update_server=False
[2026-01-10 21:59:10] 2026-01-11 02:58:27,988 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 21:59:10] 2026-01-11 02:58:28,008 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 21:59:10] 2026-01-11 02:58:28,009 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 21:59:10] 2026-01-11 02:58:28,009 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:59:10] 2026-01-11 02:58:28,009 | INFO     | will abort loop
[2026-01-10 21:59:10] 2026-01-11 02:58:28,392 | INFO     | all data control threads have been joined
[2026-01-10 21:59:10] 2026-01-11 02:58:28,799 | INFO     | all payload control threads have been joined
[2026-01-10 21:59:10] 2026-01-11 02:58:28,992 | INFO     | [job] retrieve thread has finished
[2026-01-10 21:59:10] 2026-01-11 02:58:29,013 | INFO     | [job] job monitor thread has finished
[2026-01-10 21:59:10] 2026-01-11 02:58:29,128 | INFO     | [payload] failed_post thread has finished
[2026-01-10 21:59:10] 2026-01-11 02:58:29,168 | INFO     | all job control threads have been joined
[2026-01-10 21:59:10] 2026-01-11 02:58:29,305 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 21:59:10] 2026-01-11 02:58:29,379 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 21:59:10] 2026-01-11 02:58:29,398 | INFO     | [data] control thread has finished
[2026-01-10 21:59:10] 2026-01-11 02:58:29,448 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 21:59:10] 2026-01-11 02:58:29,621 | INFO     | [data] copytool_in thread has finished
[2026-01-10 21:59:10] 2026-01-11 02:58:29,622 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 21:59:10] 2026-01-11 02:58:29,809 | INFO     | [payload] control thread has finished
[2026-01-10 21:59:10] 2026-01-11 02:58:29,978 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 21:59:10] 2026-01-11 02:58:30,172 | INFO     | [job] control thread has finished
[2026-01-10 21:59:10] 2026-01-11 02:58:30,221 | INFO     | [payload] validate_post thread has finished
[2026-01-10 21:59:10] 2026-01-11 02:58:30,264 | INFO     | [job] validate thread has finished
[2026-01-10 21:59:10] 2026-01-11 02:58:30,472 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 21:59:10] 2026-01-11 02:58:30,760 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:59:10] 2026-01-11 02:58:31,310 | INFO     | [data] copytool_out thread has finished
[2026-01-10 21:59:10] 2026-01-11 02:58:31,766 | INFO     | [job] queue monitor thread has finished
[2026-01-10 21:59:10] 2026-01-11 02:58:33,385 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 21:59:10] 2026-01-11 02:58:59,105 | INFO     | PID=808750 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 21:59:10] 2026-01-11 02:58:59,105 | INFO     | .. there are 20 such processes running
[2026-01-10 21:59:10] 2026-01-11 02:58:59,106 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 21:59:10] 2026-01-11 02:58:59,106 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 21:59:10] 2026-01-11 02:58:59,106 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 21:59:10] 2026-01-11 02:59:04,729 | INFO     | [monitor] cgroup control has ended
[2026-01-10 21:59:10] 2026-01-11 02:59:05,342 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140567502124864)>', '<ExcThread(monitor, started 140566327179008)>']
[2026-01-10 21:59:10] 2026-01-11 02:59:06,144 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 21:59:10] 2026-01-11 02:59:06,144 | INFO     | [monitor] control thread has ended
[2026-01-10 21:59:10] 2026-01-11 02:59:10,368 | INFO     | all workflow threads have been joined
[2026-01-10 21:59:10] 2026-01-11 02:59:10,369 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 21:59:10] 2026-01-11 02:59:10,369 | INFO     | traces error code: 0
[2026-01-10 21:59:10] 2026-01-11 02:59:10,369 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 21:59:10] 2026-01-11 02:59:10,487 [wrapper] ==== pilot stdout END ====
[2026-01-10 21:59:10] 2026-01-11 02:59:10,489 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 21:59:10] 2026-01-11 02:59:10,492 [wrapper] pilotpid: 808750
[2026-01-10 21:59:10] 2026-01-11 02:59:10,494 [wrapper] Pilot exit status: 0
[2026-01-10 21:59:10] 2026-01-11 02:59:10,504 [wrapper] pandaids: 6963157028
[2026-01-10 21:59:10] 2026-01-11 02:59:10,575 [wrapper] cleanup supervisor_pilot 1386314 808751
[2026-01-10 21:59:10] 2026-01-11 02:59:10,577 [wrapper] Test setup, not cleaning
[2026-01-10 21:59:10] 2026-01-11 02:59:10,578 [wrapper] apfmon messages muted
[2026-01-10 21:59:10] 2026-01-11 02:59:10,580 [wrapper] ==== wrapper stdout END ====
[2026-01-10 21:59:10] 2026-01-11 02:59:10,582 [wrapper] ==== wrapper stderr END ====
[2026-01-10 21:59:10]  *** Error codes and diagnostics ***
[2026-01-10 21:59:10]     "exeErrorCode": 0,
[2026-01-10 21:59:10]     "exeErrorDiag": "",
[2026-01-10 21:59:10]     "pilotErrorCode": 0,
[2026-01-10 21:59:10]     "pilotErrorDiag": "",
[2026-01-10 21:59:10]  *** Listing of results directory ***
[2026-01-10 21:59:10] total 439932
[2026-01-10 21:59:10] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-10 21:59:10] -rwx------. 1 boincer umatlas     36322 Jan  8 16:47 runpilot2-wrapper.sh
[2026-01-10 21:59:10] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:50 queuedata.json
[2026-01-10 21:59:10] -rw-r--r--. 1 boincer umatlas       100 Jan 10 19:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 21:59:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 19:11 run_atlas
[2026-01-10 21:59:10] -rw-r--r--. 1 boincer umatlas       105 Jan 10 19:11 job.xml
[2026-01-10 21:59:10] -rw-r--r--. 2 boincer umatlas 222469190 Jan 10 19:11 EVNT.47898824._001222.pool.root.1
[2026-01-10 21:59:10] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 19:11 start_atlas.sh
[2026-01-10 21:59:10] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 19:11 shared
[2026-01-10 21:59:10] -rw-r--r--. 2 boincer umatlas    592402 Jan 10 19:11 input.tar.gz
[2026-01-10 21:59:10] -rw-r--r--. 1 boincer umatlas         0 Jan 10 19:11 boinc_lockfile
[2026-01-10 21:59:10] -rw-r--r--. 1 boincer umatlas      2520 Jan 10 19:11 pandaJob.out
[2026-01-10 21:59:10] -rw-------. 1 boincer umatlas        57 Jan 10 19:11 setup.sh.local
[2026-01-10 21:59:10] -rw-------. 1 boincer umatlas    989548 Jan 10 19:11 agis_schedconf.cvmfs.json
[2026-01-10 21:59:10] -rw-------. 1 boincer umatlas   1516240 Jan 10 19:11 agis_ddmendpoints.agis.ALL.json
[2026-01-10 21:59:10] drwx------. 5 boincer umatlas      4096 Jan 10 19:11 pilot3
[2026-01-10 21:59:10] -rw-r--r--. 1 boincer umatlas      6945 Jan 10 21:54 init_data.xml
[2026-01-10 21:59:10] -rw-------. 1 boincer umatlas 220503460 Jan 10 21:57 HITS.47898826._032157.pool.root.1
[2026-01-10 21:59:10] -rw-r--r--. 1 boincer umatlas       529 Jan 10 21:57 boinc_task_state.xml
[2026-01-10 21:59:10] -rw-------. 1 boincer umatlas      1028 Jan 10 21:58 memory_monitor_summary.json
[2026-01-10 21:59:10] -rw-------. 1 boincer umatlas    440943 Jan 10 21:58 log.47898826._032157.job.log.tgz.1
[2026-01-10 21:59:10] -rw-------. 1 boincer umatlas      7773 Jan 10 21:58 heartbeat.json
[2026-01-10 21:59:10] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 21:58 boinc_mmap_file
[2026-01-10 21:59:10] -rw-r--r--. 1 boincer umatlas        27 Jan 10 21:58 wrapper_checkpoint.txt
[2026-01-10 21:59:10] -rw-------. 1 boincer umatlas        95 Jan 10 21:58 pilot_heartbeat.json
[2026-01-10 21:59:10] -rw-------. 1 boincer umatlas      5009 Jan 10 21:59 pilotlog.txt
[2026-01-10 21:59:10] -rw-------. 1 boincer umatlas   1359513 Jan 10 21:59 log.47898826._032157.job.log.1
[2026-01-10 21:59:10] -rw-------. 1 boincer umatlas       357 Jan 10 21:59 output.list
[2026-01-10 21:59:10] -rw-r--r--. 1 boincer umatlas       620 Jan 10 21:59 runtime_log
[2026-01-10 21:59:10] -rw-------. 1 boincer umatlas   1822720 Jan 10 21:59 result.tar.gz
[2026-01-10 21:59:10] -rw-r--r--. 1 boincer umatlas      9340 Jan 10 21:59 runtime_log.err
[2026-01-10 21:59:10] -rw-------. 1 boincer umatlas       655 Jan 10 21:59 GP3NDmM2Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfLgKDmH2RRdm.diag
[2026-01-10 21:59:10] -rw-r--r--. 1 boincer umatlas     21345 Jan 10 21:59 stderr.txt
[2026-01-10 21:59:10] HITS file was successfully produced:
[2026-01-10 21:59:10] -rw-------. 1 boincer umatlas 220503460 Jan 10 21:57 shared/HITS.pool.root.1
[2026-01-10 21:59:10]  *** Contents of shared directory: ***
[2026-01-10 21:59:10] total 434976
[2026-01-10 21:59:10] -rw-r--r--. 2 boincer umatlas 222469190 Jan 10 19:11 ATLAS.root_0
[2026-01-10 21:59:10] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 19:11 start_atlas.sh
[2026-01-10 21:59:10] -rw-r--r--. 2 boincer umatlas    592402 Jan 10 19:11 input.tar.gz
[2026-01-10 21:59:10] -rw-------. 1 boincer umatlas 220503460 Jan 10 21:57 HITS.pool.root.1
[2026-01-10 21:59:10] -rw-------. 1 boincer umatlas   1822720 Jan 10 21:59 result.tar.gz
21:59:12 (803930): run_atlas exited; CPU time 43754.511516
21:59:12 (803930): called boinc_finish(0)

</stderr_txt>
]]>

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