Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:51:56 (2593379): wrapper (7.7.26015): starting
18:51:56 (2593379): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 18:51:56] Arguments: --nthreads 12
[2026-01-10 18:51:56] Threads: 12
[2026-01-10 18:51:56] Checking for CVMFS
[2026-01-10 18:51:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:51:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:51:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:51:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:51:57] 2.13.3.0 8454 24648 180304 154997 0 83 34810972 39288833 7946 16776704 0 8419752 99.475 11036082 33911 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 18:51:57] CVMFS is ok
[2026-01-10 18:51:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:51:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:51:57] Further information can be found at the LHC@home message board.
[2026-01-10 18:51:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:51:57] Checking for apptainer binary...
[2026-01-10 18:51:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:51:57] Running /usr/bin/apptainer --version
[2026-01-10 18:51:57] apptainer version 1.4.5-2.el9
[2026-01-10 18:51:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:51:58] c-211-31.aglt2.org
[2026-01-10 18:51:58] apptainer works
[2026-01-10 18:51:58] Set ATHENA_PROC_NUMBER=12
[2026-01-10 18:51:58] Set ATHENA_CORE_NUMBER=12
[2026-01-10 18:51:58] Starting ATLAS job with PandaID=6965803181
[2026-01-10 18:51:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 21:42:36]  *** The last 200 lines of the pilot log: ***
[2026-01-10 21:42:36] 2026-01-11 02:41:30,427 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 21:42:36] 2026-01-11 02:41:30,443 | INFO     | fitting pss+swap vs Time
[2026-01-10 21:42:36] 2026-01-11 02:41:30,443 | INFO     | sum of square deviations: 1418633600.4337404
[2026-01-10 21:42:36] 2026-01-11 02:41:30,445 | INFO     | sum of deviations: -66427571193.096375
[2026-01-10 21:42:36] 2026-01-11 02:41:30,445 | INFO     | mean x: 1768094196.3253012
[2026-01-10 21:42:36] 2026-01-11 02:41:30,445 | INFO     | mean y: 2843434.9277108433
[2026-01-10 21:42:36] 2026-01-11 02:41:30,445 | INFO     | intersect: 82793920050.19301
[2026-01-10 21:42:36] 2026-01-11 02:41:30,462 | INFO     | chi2: 8.318329790210178
[2026-01-10 21:42:36] 2026-01-11 02:41:30,462 | INFO     | sum of square deviations: 1294480682.4968908
[2026-01-10 21:42:36] 2026-01-11 02:41:30,463 | INFO     | sum of deviations: -10093719678.01862
[2026-01-10 21:42:36] 2026-01-11 02:41:30,463 | INFO     | mean x: 1768094043.9440994
[2026-01-10 21:42:36] 2026-01-11 02:41:30,464 | INFO     | mean y: 2912628.664596273
[2026-01-10 21:42:36] 2026-01-11 02:41:30,464 | INFO     | intersect: 13789634891.31137
[2026-01-10 21:42:36] 2026-01-11 02:41:30,464 | INFO     | chi2: 4.931007979181992
[2026-01-10 21:42:36] 2026-01-11 02:41:30,464 | INFO     | current chi2=4.931007979181992 (change=40.72117716485246 %)
[2026-01-10 21:42:36] 2026-01-11 02:41:30,465 | INFO     | sum of square deviations: 1177816272.2243636
[2026-01-10 21:42:36] 2026-01-11 02:41:30,470 | INFO     | sum of deviations: 26230719375.37819
[2026-01-10 21:42:36] 2026-01-11 02:41:30,470 | INFO     | mean x: 1768093891.5705128
[2026-01-10 21:42:36] 2026-01-11 02:41:30,470 | INFO     | mean y: 2959867.6474358975
[2026-01-10 21:42:36] 2026-01-11 02:41:30,470 | INFO     | intersect: -39373618460.242905
[2026-01-10 21:42:36] 2026-01-11 02:41:30,471 | INFO     | chi2: 3.373797324360864
[2026-01-10 21:42:36] 2026-01-11 02:41:30,471 | INFO     | current chi2=3.373797324360864 (change=31.579966233992067 %)
[2026-01-10 21:42:36] 2026-01-11 02:41:30,471 | INFO     | sum of square deviations: 1068388787.430465
[2026-01-10 21:42:36] 2026-01-11 02:41:30,472 | INFO     | sum of deviations: 47968944952.03311
[2026-01-10 21:42:36] 2026-01-11 02:41:30,472 | INFO     | mean x: 1768093739.192053
[2026-01-10 21:42:36] 2026-01-11 02:41:30,473 | INFO     | mean y: 2989998.8609271524
[2026-01-10 21:42:36] 2026-01-11 02:41:30,473 | INFO     | intersect: -79381586330.6225
[2026-01-10 21:42:36] 2026-01-11 02:41:30,473 | INFO     | chi2: 2.772786863445114
[2026-01-10 21:42:36] 2026-01-11 02:41:30,473 | INFO     | current chi2=2.772786863445114 (change=17.81406537304686 %)
[2026-01-10 21:42:36] 2026-01-11 02:41:30,475 | INFO     | right removable region: 150
[2026-01-10 21:42:36] 2026-01-11 02:41:30,476 | INFO     | sum of square deviations: 1294103221.3788786
[2026-01-10 21:42:36] 2026-01-11 02:41:30,477 | INFO     | sum of deviations: -109233229625.78262
[2026-01-10 21:42:36] 2026-01-11 02:41:30,477 | INFO     | mean x: 1768094348.9378881
[2026-01-10 21:42:36] 2026-01-11 02:41:30,477 | INFO     | mean y: 2895431.5217391304
[2026-01-10 21:42:36] 2026-01-11 02:41:30,477 | INFO     | intersect: 149244975063.92868
[2026-01-10 21:42:36] 2026-01-11 02:41:30,478 | INFO     | chi2: 5.868706711889269
[2026-01-10 21:42:36] 2026-01-11 02:41:30,478 | INFO     | current chi2=5.868706711889269 (change=29.448496754767582 %)
[2026-01-10 21:42:36] 2026-01-11 02:41:30,478 | INFO     | sum of square deviations: 1177289985.743588
[2026-01-10 21:42:36] 2026-01-11 02:41:30,479 | INFO     | sum of deviations: -111690419018.4872
[2026-01-10 21:42:36] 2026-01-11 02:41:30,486 | INFO     | mean x: 1768094501.4102564
[2026-01-10 21:42:36] 2026-01-11 02:41:30,486 | INFO     | mean y: 2898625.1794871795
[2026-01-10 21:42:36] 2026-01-11 02:41:30,486 | INFO     | intersect: 167743402764.49304
[2026-01-10 21:42:36] 2026-01-11 02:41:30,486 | INFO     | chi2: 5.7703384746373425
[2026-01-10 21:42:36] 2026-01-11 02:41:30,487 | INFO     | current chi2=5.7703384746373425 (change=1.6761484613406312 %)
[2026-01-10 21:42:36] 2026-01-11 02:41:30,487 | INFO     | left removable region: 20
[2026-01-10 21:42:36] 2026-01-11 02:41:30,487 | INFO     | sum of square deviations: 681648085.7230749
[2026-01-10 21:42:36] 2026-01-11 02:41:30,488 | INFO     | sum of deviations: -4165503448.753849
[2026-01-10 21:42:36] 2026-01-11 02:41:30,488 | INFO     | mean x: 1768094319.0461538
[2026-01-10 21:42:36] 2026-01-11 02:41:30,488 | INFO     | mean y: 3077348.792307692
[2026-01-10 21:42:36] 2026-01-11 02:41:30,488 | INFO     | intersect: 10807777219.541939
[2026-01-10 21:42:36] 2026-01-11 02:41:30,489 | INFO     | chi2: 0.2407182294063415
[2026-01-10 21:42:36] 2026-01-11 02:41:30,489 | INFO     | current memory leak: -6.11 B/s (using 130 data points, chi2=0.24)
[2026-01-10 21:42:36] 2026-01-11 02:41:30,503 | INFO     | could have reported an average CPU frequency of 2899 MHz (9 samples)
[2026-01-10 21:42:36] 2026-01-11 02:41:30,504 | INFO     | ..............................
[2026-01-10 21:42:36] 2026-01-11 02:41:30,504 | INFO     | . Timing measurements:
[2026-01-10 21:42:36] 2026-01-11 02:41:30,504 | INFO     | . get job = 0 s
[2026-01-10 21:42:36] 2026-01-11 02:41:30,504 | INFO     | . initial setup = 2 s
[2026-01-10 21:42:36] 2026-01-11 02:41:30,504 | INFO     | . payload setup = 7 s
[2026-01-10 21:42:36] 2026-01-11 02:41:30,505 | INFO     | . stage-in = 0 s
[2026-01-10 21:42:36] 2026-01-11 02:41:30,505 | INFO     | . payload execution = 10100 s
[2026-01-10 21:42:36] 2026-01-11 02:41:30,505 | INFO     | . stage-out = 3 s
[2026-01-10 21:42:36] 2026-01-11 02:41:30,505 | INFO     | . log creation = 1 s
[2026-01-10 21:42:36] 2026-01-11 02:41:30,505 | INFO     | ..............................
[2026-01-10 21:42:36] 2026-01-11 02:41:30,962 | INFO     | 
[2026-01-10 21:42:36] 2026-01-11 02:41:30,962 | INFO     | job summary report
[2026-01-10 21:42:36] 2026-01-11 02:41:30,962 | INFO     | --------------------------------------------------
[2026-01-10 21:42:36] 2026-01-11 02:41:30,962 | INFO     | PanDA job id: 6965803181
[2026-01-10 21:42:36] 2026-01-11 02:41:30,962 | INFO     | task id: 47962010
[2026-01-10 21:42:36] 2026-01-11 02:41:30,962 | INFO     | errors: (none)
[2026-01-10 21:42:36] 2026-01-11 02:41:30,963 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 21:42:36] 2026-01-11 02:41:30,963 | INFO     | pilot state: finished 
[2026-01-10 21:42:36] 2026-01-11 02:41:30,963 | INFO     | transexitcode: 0
[2026-01-10 21:42:36] 2026-01-11 02:41:30,963 | INFO     | exeerrorcode: 0
[2026-01-10 21:42:36] 2026-01-11 02:41:30,963 | INFO     | exeerrordiag: 
[2026-01-10 21:42:36] 2026-01-11 02:41:30,963 | INFO     | exitcode: 0
[2026-01-10 21:42:36] 2026-01-11 02:41:30,963 | INFO     | exitmsg: OK
[2026-01-10 21:42:36] 2026-01-11 02:41:30,964 | INFO     | cpuconsumptiontime: 26547 s
[2026-01-10 21:42:36] 2026-01-11 02:41:30,964 | INFO     | nevents: 50
[2026-01-10 21:42:36] 2026-01-11 02:41:30,964 | INFO     | neventsw: 0
[2026-01-10 21:42:36] 2026-01-11 02:41:30,964 | INFO     | pid: 2603424
[2026-01-10 21:42:36] 2026-01-11 02:41:30,964 | INFO     | pgrp: 2603424
[2026-01-10 21:42:36] 2026-01-11 02:41:30,964 | INFO     | corecount: 12
[2026-01-10 21:42:36] 2026-01-11 02:41:30,964 | INFO     | event service: False
[2026-01-10 21:42:36] 2026-01-11 02:41:30,964 | INFO     | sizes: {0: 2284615, 1: 2284615, 5: 2284905, 12: 2284961, 10111: 2314265, 10115: 2323259, 10118: 2323443, 10143: 2323753}
[2026-01-10 21:42:36] 2026-01-11 02:41:30,965 | INFO     | --------------------------------------------------
[2026-01-10 21:42:36] 2026-01-11 02:41:30,965 | INFO     | 
[2026-01-10 21:42:36] 2026-01-11 02:41:30,965 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 21:42:36] 2026-01-11 02:41:31,122 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 21:42:36] 2026-01-11 02:41:31,122 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 21:42:36] 2026-01-11 02:41:31,123 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 21:42:36] 2026-01-11 02:41:31,123 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 21:42:36] 2026-01-11 02:41:31,123 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 21:42:36] 2026-01-11 02:41:31,123 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 21:42:36] 2026-01-11 02:41:31,123 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 21:42:36] 2026-01-11 02:41:31,123 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 21:42:36] 2026-01-11 02:41:31,123 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 21:42:36] 2026-01-11 02:41:31,124 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 21:42:36] 2026-01-11 02:41:31,124 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 21:42:36] 2026-01-11 02:41:31,124 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 21:42:36] 2026-01-11 02:41:31,124 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 21:42:36] 2026-01-11 02:41:31,124 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 21:42:36] 2026-01-11 02:41:31,124 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 21:42:36] 2026-01-11 02:41:31,124 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 21:42:36] 2026-01-11 02:41:31,125 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 21:42:36] 2026-01-11 02:41:31,125 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 21:42:36] 2026-01-11 02:41:31,125 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 21:42:36] 2026-01-11 02:41:31,125 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 21:42:36] 2026-01-11 02:41:31,125 | INFO     | job 6965803181 has completed (purged errors)
[2026-01-10 21:42:36] 2026-01-11 02:41:31,136 | INFO     | overall cleanup function is called
[2026-01-10 21:42:36] 2026-01-11 02:41:32,178 | INFO     | --- collectZombieJob: --- 10, [2603424]
[2026-01-10 21:42:36] 2026-01-11 02:41:32,178 | INFO     | zombie collector waiting for pid 2603424
[2026-01-10 21:42:36] 2026-01-11 02:41:32,178 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 21:42:36] 2026-01-11 02:41:32,178 | INFO     | collected zombie processes
[2026-01-10 21:42:36] 2026-01-11 02:41:32,178 | INFO     | will attempt to kill all subprocesses of pid=2603424
[2026-01-10 21:42:36] 2026-01-11 02:41:32,947 | INFO     | process IDs to be killed: [2603424] (in reverse order)
[2026-01-10 21:42:36] 2026-01-11 02:41:33,257 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 21:42:36] 2026-01-11 02:41:33,257 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 21:42:36] 2026-01-11 02:41:33,282 | INFO     | did not find any defunct processes belonging to 2603424
[2026-01-10 21:42:36] 2026-01-11 02:41:33,309 | INFO     | did not find any defunct processes belonging to 2603424
[2026-01-10 21:42:36] 2026-01-11 02:41:33,309 | INFO     | ready for new job
[2026-01-10 21:42:36] 2026-01-11 02:41:33,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 21:42:36] 2026-01-11 02:41:33,317 | INFO     | ***************************************
[2026-01-10 21:42:36] 2026-01-11 02:41:33,318 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 21:42:36] 2026-01-11 02:41:33,318 | INFO     | ***************************************
[2026-01-10 21:42:36] 2026-01-11 02:41:33,318 | INFO     | 
[2026-01-10 21:42:36] 2026-01-11 02:41:33,320 | INFO     | architecture information:
[2026-01-10 21:42:36] 2026-01-11 02:41:33,330 | INFO     | executing command: cat /etc/os-release
[2026-01-10 21:42:36] 2026-01-11 02:41:33,398 | INFO     | cat /etc/os-release:
[2026-01-10 21:42:36] NAME="CentOS Linux"
[2026-01-10 21:42:36] VERSION="7 (Core)"
[2026-01-10 21:42:36] ID="centos"
[2026-01-10 21:42:36] ID_LIKE="rhel fedora"
[2026-01-10 21:42:36] VERSION_ID="7"
[2026-01-10 21:42:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 21:42:36] ANSI_COLOR="0;31"
[2026-01-10 21:42:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 21:42:36] HOME_URL="https://www.centos.org/"
[2026-01-10 21:42:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 21:42:36] 
[2026-01-10 21:42:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 21:42:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 21:42:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 21:42:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 21:42:36] 
[2026-01-10 21:42:36] 2026-01-11 02:41:33,398 | INFO     | ***************************************
[2026-01-10 21:42:36] 2026-01-11 02:41:33,902 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 21:42:36] 2026-01-11 02:41:34,008 | INFO     | sufficient remaining disk space (53632565248 B)
[2026-01-10 21:42:36] 2026-01-11 02:41:34,008 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 21:42:36] 2026-01-11 02:41:34,008 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 21:42:36] 2026-01-11 02:41:34,009 | INFO     | update_server=False
[2026-01-10 21:42:36] 2026-01-11 02:41:34,009 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 21:42:36] 2026-01-11 02:41:34,009 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 21:42:36] 2026-01-11 02:41:34,129 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 21:42:36] 2026-01-11 02:41:34,129 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 21:42:36] 2026-01-11 02:41:34,130 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:42:36] 2026-01-11 02:41:34,130 | INFO     | will abort loop
[2026-01-10 21:42:36] 2026-01-11 02:41:34,518 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 21:42:36] 2026-01-11 02:41:35,015 | INFO     | [job] retrieve thread has finished
[2026-01-10 21:42:36] 2026-01-11 02:41:35,043 | INFO     | all job control threads have been joined
[2026-01-10 21:42:36] 2026-01-11 02:41:35,095 | INFO     | all data control threads have been joined
[2026-01-10 21:42:36] 2026-01-11 02:41:35,135 | INFO     | [job] validate thread has finished
[2026-01-10 21:42:36] 2026-01-11 02:41:35,137 | INFO     | [job] job monitor thread has finished
[2026-01-10 21:42:36] 2026-01-11 02:41:35,154 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 21:42:36] 2026-01-11 02:41:35,247 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 21:42:36] 2026-01-11 02:41:35,342 | INFO     | all payload control threads have been joined
[2026-01-10 21:42:36] 2026-01-11 02:41:35,514 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 21:42:36] 2026-01-11 02:41:35,618 | INFO     | [data] copytool_in thread has finished
[2026-01-10 21:42:36] 2026-01-11 02:41:35,722 | INFO     | [payload] validate_post thread has finished
[2026-01-10 21:42:36] 2026-01-11 02:41:35,906 | INFO     | [payload] failed_post thread has finished
[2026-01-10 21:42:36] 2026-01-11 02:41:35,971 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:42:36] 2026-01-11 02:41:36,017 | INFO     | [data] copytool_out thread has finished
[2026-01-10 21:42:36] 2026-01-11 02:41:36,050 | INFO     | [job] control thread has finished
[2026-01-10 21:42:36] 2026-01-11 02:41:36,102 | INFO     | [data] control thread has finished
[2026-01-10 21:42:36] 2026-01-11 02:41:36,139 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 21:42:36] 2026-01-11 02:41:36,349 | INFO     | [payload] control thread has finished
[2026-01-10 21:42:36] 2026-01-11 02:41:36,977 | INFO     | [job] queue monitor thread has finished
[2026-01-10 21:42:36] 2026-01-11 02:41:38,532 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 21:42:36] 2026-01-11 02:42:03,969 | INFO     | PID=2597087 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 21:42:36] 2026-01-11 02:42:03,969 | INFO     | .. there are 6 such processes running
[2026-01-10 21:42:36] 2026-01-11 02:42:03,970 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 21:42:36] 2026-01-11 02:42:03,970 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 21:42:36] 2026-01-11 02:42:03,970 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 21:42:36] 2026-01-11 02:42:28,339 | INFO     | [monitor] cgroup control has ended
[2026-01-10 21:42:36] 2026-01-11 02:42:29,681 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139903353931584)>', '<ExcThread(monitor, started 139902989629184)>']
[2026-01-10 21:42:36] 2026-01-11 02:42:30,125 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 21:42:36] 2026-01-11 02:42:30,126 | INFO     | [monitor] control thread has ended
[2026-01-10 21:42:36] 2026-01-11 02:42:34,708 | INFO     | all workflow threads have been joined
[2026-01-10 21:42:36] 2026-01-11 02:42:34,708 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 21:42:36] 2026-01-11 02:42:34,708 | INFO     | traces error code: 0
[2026-01-10 21:42:36] 2026-01-11 02:42:34,708 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 21:42:36] 2026-01-11 02:42:35,292 [wrapper] ==== pilot stdout END ====
[2026-01-10 21:42:36] 2026-01-11 02:42:35,336 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 21:42:36] 2026-01-11 02:42:35,380 [wrapper] pilotpid: 2597087
[2026-01-10 21:42:36] 2026-01-11 02:42:35,421 [wrapper] Pilot exit status: 0
[2026-01-10 21:42:36] 2026-01-11 02:42:35,633 [wrapper] pandaids: 6965803181
[2026-01-10 21:42:36] 2026-01-11 02:42:36,054 [wrapper] cleanup supervisor_pilot 2833468 2597088
[2026-01-10 21:42:36] 2026-01-11 02:42:36,097 [wrapper] Test setup, not cleaning
[2026-01-10 21:42:36] 2026-01-11 02:42:36,140 [wrapper] apfmon messages muted
[2026-01-10 21:42:36] 2026-01-11 02:42:36,175 [wrapper] ==== wrapper stdout END ====
[2026-01-10 21:42:36] 2026-01-11 02:42:36,202 [wrapper] ==== wrapper stderr END ====
[2026-01-10 21:42:36]  *** Error codes and diagnostics ***
[2026-01-10 21:42:36]     "exeErrorCode": 0,
[2026-01-10 21:42:36]     "exeErrorDiag": "",
[2026-01-10 21:42:36]     "pilotErrorCode": 0,
[2026-01-10 21:42:36]     "pilotErrorDiag": "",
[2026-01-10 21:42:36]  *** Listing of results directory ***
[2026-01-10 21:42:36] total 432592
[2026-01-10 21:42:36] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 21:42:36] -rwx------. 1 boincer umatlas     36322 Jan 10 18:05 runpilot2-wrapper.sh
[2026-01-10 21:42:36] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 21:42:36] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 21:42:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:51 run_atlas
[2026-01-10 21:42:36] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:51 job.xml
[2026-01-10 21:42:36] -rw-r--r--. 2 boincer umatlas 392017497 Jan 10 18:51 EVNT.47962006._000005.pool.root.1
[2026-01-10 21:42:36] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:51 start_atlas.sh
[2026-01-10 21:42:36] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:51 shared
[2026-01-10 21:42:36] -rw-r--r--. 2 boincer umatlas    592609 Jan 10 18:51 input.tar.gz
[2026-01-10 21:42:36] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:51 boinc_lockfile
[2026-01-10 21:42:36] -rw-r--r--. 1 boincer umatlas      2888 Jan 10 18:51 pandaJob.out
[2026-01-10 21:42:36] -rw-------. 1 boincer umatlas        57 Jan 10 18:51 setup.sh.local
[2026-01-10 21:42:36] -rw-------. 1 boincer umatlas    989548 Jan 10 18:52 agis_schedconf.cvmfs.json
[2026-01-10 21:42:36] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:52 agis_ddmendpoints.agis.ALL.json
[2026-01-10 21:42:36] drwx------. 5 boincer umatlas      4096 Jan 10 18:52 pilot3
[2026-01-10 21:42:36] -rw-r--r--. 1 boincer umatlas       529 Jan 10 21:06 boinc_task_state.xml
[2026-01-10 21:42:36] -rw-r--r--. 1 boincer umatlas      6524 Jan 10 21:36 init_data.xml
[2026-01-10 21:42:36] -rw-------. 1 boincer umatlas  40995210 Jan 10 21:40 HITS.47962010._002633.pool.root.1
[2026-01-10 21:42:36] -rw-------. 1 boincer umatlas      1039 Jan 10 21:40 memory_monitor_summary.json
[2026-01-10 21:42:36] -rw-------. 1 boincer umatlas   1705749 Jan 10 21:41 log.47962010._002633.job.log.tgz.1
[2026-01-10 21:42:36] -rw-------. 1 boincer umatlas        95 Jan 10 21:41 pilot_heartbeat.json
[2026-01-10 21:42:36] -rw-------. 1 boincer umatlas      8568 Jan 10 21:41 heartbeat.json
[2026-01-10 21:42:36] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 21:42 boinc_mmap_file
[2026-01-10 21:42:36] -rw-r--r--. 1 boincer umatlas        27 Jan 10 21:42 wrapper_checkpoint.txt
[2026-01-10 21:42:36] -rw-------. 1 boincer umatlas      5009 Jan 10 21:42 pilotlog.txt
[2026-01-10 21:42:36] -rw-------. 1 boincer umatlas   1313646 Jan 10 21:42 log.47962010._002633.job.log.1
[2026-01-10 21:42:36] -rw-------. 1 boincer umatlas       353 Jan 10 21:42 output.list
[2026-01-10 21:42:36] -rw-r--r--. 1 boincer umatlas       620 Jan 10 21:42 runtime_log
[2026-01-10 21:42:36] -rw-------. 1 boincer umatlas   3041280 Jan 10 21:42 result.tar.gz
[2026-01-10 21:42:36] -rw-r--r--. 1 boincer umatlas      9345 Jan 10 21:42 runtime_log.err
[2026-01-10 21:42:36] -rw-------. 1 boincer umatlas       656 Jan 10 21:42 3nQNDm9Bxy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9wmKDm6oi6on.diag
[2026-01-10 21:42:36] -rw-r--r--. 1 boincer umatlas     20782 Jan 10 21:42 stderr.txt
[2026-01-10 21:42:36] HITS file was successfully produced:
[2026-01-10 21:42:36] -rw-------. 1 boincer umatlas 40995210 Jan 10 21:40 shared/HITS.pool.root.1
[2026-01-10 21:42:36]  *** Contents of shared directory: ***
[2026-01-10 21:42:36] total 426440
[2026-01-10 21:42:36] -rw-r--r--. 2 boincer umatlas 392017497 Jan 10 18:51 ATLAS.root_0
[2026-01-10 21:42:36] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:51 start_atlas.sh
[2026-01-10 21:42:36] -rw-r--r--. 2 boincer umatlas    592609 Jan 10 18:51 input.tar.gz
[2026-01-10 21:42:36] -rw-------. 1 boincer umatlas  40995210 Jan 10 21:40 HITS.pool.root.1
[2026-01-10 21:42:36] -rw-------. 1 boincer umatlas   3041280 Jan 10 21:42 result.tar.gz
21:42:38 (2593379): run_atlas exited; CPU time 26609.607490
21:42:38 (2593379): called boinc_finish(0)

</stderr_txt>
]]>

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