Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:52:20 (725517): wrapper (7.7.26015): starting
18:52:20 (725517): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 18:52:20] Arguments: --nthreads 8
[2026-01-10 18:52:20] Threads: 8
[2026-01-10 18:52:20] Checking for CVMFS
[2026-01-10 18:52:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:52:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:52:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:52:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:52:22] 2.13.3.0 7100 95471 203956 154997 1 882 32785092 40960000 30203 16776704 0 1074939293 99.693 823153118 49085 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 18:52:22] CVMFS is ok
[2026-01-10 18:52:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:52:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:52:22] Further information can be found at the LHC@home message board.
[2026-01-10 18:52:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:52:22] Checking for apptainer binary...
[2026-01-10 18:52:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:52:22] Running /usr/bin/apptainer --version
[2026-01-10 18:52:22] apptainer version 1.4.5-2.el9
[2026-01-10 18:52:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:52:22] c8-6-10.aglt2.org
[2026-01-10 18:52:22] apptainer works
[2026-01-10 18:52:22] Set ATHENA_PROC_NUMBER=8
[2026-01-10 18:52:22] Set ATHENA_CORE_NUMBER=8
[2026-01-10 18:52:22] Starting ATLAS job with PandaID=6965803186
[2026-01-10 18:52:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:56:41]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:56:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 19:56:41]  replicas=None
[2026-01-10 19:56:41]  scope=mc16_13TeV
[2026-01-10 19:56:41]  status=None
[2026-01-10 19:56:41]  status_code=0
[2026-01-10 19:56:41]  storage_token=
[2026-01-10 19:56:41]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6965803186/log.47962010._002638.job.log.tgz.1
[2026-01-10 19:56:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/44/ae/log.47962010._002638.job.log.tgz.1
[2026-01-10 19:56:41]  workdir=None
[2026-01-10 19:56:41] ]
[2026-01-10 19:56:41] 2026-01-11 00:55:38,874 | INFO     | transferring file log.47962010._002638.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6965803186/log.47962010._002638.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 19:56:41] 2026-01-11 00:55:38,874 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6965803186/log.47962010._002638.job.log.tgz.1 /tmp/boinchome/slots/2/log.47962010._002638.job
[2026-01-10 19:56:41] 2026-01-11 00:55:38,895 | INFO     | adding to output.list: log.47962010._002638.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/44/ae/log.47962010._002638.job.log.tgz.
[2026-01-10 19:56:41] 2026-01-11 00:55:38,896 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 19:56:41] 2026-01-11 00:55:38,896 | INFO     | summary of transferred files:
[2026-01-10 19:56:41] 2026-01-11 00:55:38,896 | INFO     |  -- lfn=log.47962010._002638.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 19:56:41] 2026-01-11 00:55:38,896 | INFO     | stage-out finished correctly
[2026-01-10 19:56:41] 2026-01-11 00:55:40,535 | INFO     | time since job start (3731s) is within the limit (349056.0s)
[2026-01-10 19:56:41] 2026-01-11 00:55:42,021 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 19:56:41] 2026-01-11 00:55:42,542 | INFO     | time since job start (3733s) is within the limit (349056.0s)
[2026-01-10 19:56:41] 2026-01-11 00:55:43,103 | INFO     | job 6965803186 has state=finished
[2026-01-10 19:56:41] 2026-01-11 00:55:43,103 | INFO     | preparing for final server update for job 6965803186 in state='finished'
[2026-01-10 19:56:41] 2026-01-11 00:55:43,103 | INFO     | this job has now completed (state=finished)
[2026-01-10 19:56:41] 2026-01-11 00:55:43,103 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 19:56:41] 2026-01-11 00:55:43,103 | INFO     | log transfer has been attempted: DONE
[2026-01-10 19:56:41] 2026-01-11 00:55:43,103 | INFO     | job 6965803186 has finished - writing final server update
[2026-01-10 19:56:41] 2026-01-11 00:55:43,103 | INFO     | total number of processed events: 50 (read)
[2026-01-10 19:56:41] 2026-01-11 00:55:43,104 | INFO     | executing command: lscpu
[2026-01-10 19:56:41] 2026-01-11 00:55:43,154 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 19:56:41] 2026-01-11 00:55:43,659 | WARNING  | process 777757 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 19:56:41] 2026-01-11 00:55:43,659 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965803186/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:56:41] 2026-01-11 00:55:44,007 | INFO     | number of running child processes to parent process 777757: 1
[2026-01-10 19:56:41] 2026-01-11 00:55:44,008 | INFO     | maximum number of monitored processes: 16
[2026-01-10 19:56:41] 2026-01-11 00:55:44,547 | INFO     | time since job start (3735s) is within the limit (349056.0s)
[2026-01-10 19:56:41] 2026-01-11 00:55:46,512 | INFO     | monitor loop #266: job 0:6965803186 is in state 'finished'
[2026-01-10 19:56:41] 2026-01-11 00:55:46,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:56:41] 2026-01-11 00:55:46,553 | INFO     | time since job start (3737s) is within the limit (349056.0s)
[2026-01-10 19:56:41] 2026-01-11 00:55:47,310 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 19:56:41] 2026-01-11 00:55:47,314 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.7150390625
[2026-01-10 19:56:41] 2026-01-11 00:55:47,326 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965803186/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:56:41] 2026-01-11 00:55:47,326 | INFO     | extracted standard info from prmon json
[2026-01-10 19:56:41] 2026-01-11 00:55:47,327 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:56:41] 2026-01-11 00:55:47,327 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:56:41] 2026-01-11 00:55:47,327 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:56:41] 2026-01-11 00:55:47,328 | INFO     | sum of square deviations: 43567063.76923078
[2026-01-10 19:56:41] 2026-01-11 00:55:47,328 | INFO     | sum of deviations: 16949076405.500008
[2026-01-10 19:56:41] 2026-01-11 00:55:47,328 | INFO     | mean x: 1768091221.6538463
[2026-01-10 19:56:41] 2026-01-11 00:55:47,328 | INFO     | mean y: 2388027.75
[2026-01-10 19:56:41] 2026-01-11 00:55:47,328 | INFO     | intersect: -687845509329.7357
[2026-01-10 19:56:41] 2026-01-11 00:55:47,328 | INFO     | chi2: 2.7266122479161763
[2026-01-10 19:56:41] 2026-01-11 00:55:47,328 | INFO     | current memory leak: 389.03 B/s (using 52 data points, chi2=2.73)
[2026-01-10 19:56:41] 2026-01-11 00:55:47,328 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2026-01-10 19:56:41] 2026-01-11 00:55:47,328 | INFO     | ..............................
[2026-01-10 19:56:41] 2026-01-11 00:55:47,328 | INFO     | . Timing measurements:
[2026-01-10 19:56:41] 2026-01-11 00:55:47,328 | INFO     | . get job = 0 s
[2026-01-10 19:56:41] 2026-01-11 00:55:47,328 | INFO     | . initial setup = 5 s
[2026-01-10 19:56:41] 2026-01-11 00:55:47,328 | INFO     | . payload setup = 47 s
[2026-01-10 19:56:41] 2026-01-11 00:55:47,328 | INFO     | . stage-in = 0 s
[2026-01-10 19:56:41] 2026-01-11 00:55:47,329 | INFO     | . payload execution = 3611 s
[2026-01-10 19:56:41] 2026-01-11 00:55:47,329 | INFO     | . stage-out = 0 s
[2026-01-10 19:56:41] 2026-01-11 00:55:47,329 | INFO     | . log creation = 0 s
[2026-01-10 19:56:41] 2026-01-11 00:55:47,329 | INFO     | ..............................
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | 
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | job summary report
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | --------------------------------------------------
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | PanDA job id: 6965803186
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | task id: 47962010
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | errors: (none)
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | pilot state: finished 
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | transexitcode: 0
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | exeerrorcode: 0
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | exeerrordiag: 
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | exitcode: 0
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | exitmsg: OK
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | cpuconsumptiontime: 8621 s
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | nevents: 50
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | neventsw: 0
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | pid: 777757
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | pgrp: 777757
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | corecount: 8
[2026-01-10 19:56:41] 2026-01-11 00:55:47,362 | INFO     | event service: False
[2026-01-10 19:56:41] 2026-01-11 00:55:47,363 | INFO     | sizes: {0: 2283787, 1: 2284643, 2: 2284643, 12: 2284671, 23: 2284699, 32: 2284989, 34: 2285145, 3662: 2311622, 3664: 2320616, 3667: 2320672, 3672: 2320918}
[2026-01-10 19:56:41] 2026-01-11 00:55:47,363 | INFO     | --------------------------------------------------
[2026-01-10 19:56:41] 2026-01-11 00:55:47,363 | INFO     | 
[2026-01-10 19:56:41] 2026-01-11 00:55:47,363 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 19:56:41] 2026-01-11 00:55:47,380 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:56:41] 2026-01-11 00:55:47,380 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | job 6965803186 has completed (purged errors)
[2026-01-10 19:56:41] 2026-01-11 00:55:47,381 | INFO     | overall cleanup function is called
[2026-01-10 19:56:41] 2026-01-11 00:55:48,055 | INFO     | PID=740611 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:56:41] 2026-01-11 00:55:48,055 | INFO     | .. there are 31 such processes running
[2026-01-10 19:56:41] 2026-01-11 00:55:48,395 | INFO     | --- collectZombieJob: --- 10, [777757]
[2026-01-10 19:56:41] 2026-01-11 00:55:48,395 | INFO     | zombie collector waiting for pid 777757
[2026-01-10 19:56:41] 2026-01-11 00:55:48,395 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:56:41] 2026-01-11 00:55:48,395 | INFO     | collected zombie processes
[2026-01-10 19:56:41] 2026-01-11 00:55:48,395 | INFO     | will attempt to kill all subprocesses of pid=777757
[2026-01-10 19:56:41] 2026-01-11 00:55:48,777 | INFO     | process IDs to be killed: [777757] (in reverse order)
[2026-01-10 19:56:41] 2026-01-11 00:55:48,926 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:56:41] 2026-01-11 00:55:48,926 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:56:41] 2026-01-11 00:55:48,949 | INFO     | did not find any defunct processes belonging to 777757
[2026-01-10 19:56:41] 2026-01-11 00:55:48,970 | INFO     | did not find any defunct processes belonging to 777757
[2026-01-10 19:56:41] 2026-01-11 00:55:48,970 | INFO     | ready for new job
[2026-01-10 19:56:41] 2026-01-11 00:55:48,970 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:56:41] 2026-01-11 00:55:48,971 | INFO     | ***************************************
[2026-01-10 19:56:41] 2026-01-11 00:55:48,971 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:56:41] 2026-01-11 00:55:48,971 | INFO     | ***************************************
[2026-01-10 19:56:41] 2026-01-11 00:55:48,971 | INFO     | 
[2026-01-10 19:56:41] 2026-01-11 00:55:48,976 | INFO     | architecture information:
[2026-01-10 19:56:41] 2026-01-11 00:55:48,976 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:56:41] 2026-01-11 00:55:48,992 | INFO     | cat /etc/os-release:
[2026-01-10 19:56:41] NAME="CentOS Linux"
[2026-01-10 19:56:41] VERSION="7 (Core)"
[2026-01-10 19:56:41] ID="centos"
[2026-01-10 19:56:41] ID_LIKE="rhel fedora"
[2026-01-10 19:56:41] VERSION_ID="7"
[2026-01-10 19:56:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:56:41] ANSI_COLOR="0;31"
[2026-01-10 19:56:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:56:41] HOME_URL="https://www.centos.org/"
[2026-01-10 19:56:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:56:41] 
[2026-01-10 19:56:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:56:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:56:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:56:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:56:41] 
[2026-01-10 19:56:41] 2026-01-11 00:55:48,992 | INFO     | ***************************************
[2026-01-10 19:56:41] 2026-01-11 00:55:49,495 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 19:56:41] 2026-01-11 00:55:49,512 | INFO     | sufficient remaining disk space (172653281280 B)
[2026-01-10 19:56:41] 2026-01-11 00:55:49,513 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:56:41] 2026-01-11 00:55:49,513 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:56:41] 2026-01-11 00:55:49,513 | INFO     | update_server=False
[2026-01-10 19:56:41] 2026-01-11 00:55:49,513 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:56:41] 2026-01-11 00:55:49,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:56:41] 2026-01-11 00:55:49,796 | INFO     | all data control threads have been joined
[2026-01-10 19:56:41] 2026-01-11 00:55:50,020 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:56:41] 2026-01-11 00:55:50,020 | INFO     | aborting loop
[2026-01-10 19:56:41] 2026-01-11 00:55:50,519 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:56:41] 2026-01-11 00:55:50,607 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:56:41] 2026-01-11 00:55:50,801 | INFO     | [data] control thread has finished
[2026-01-10 19:56:41] 2026-01-11 00:55:50,808 | INFO     | all payload control threads have been joined
[2026-01-10 19:56:41] 2026-01-11 00:55:50,980 | INFO     | [job] validate thread has finished
[2026-01-10 19:56:41] 2026-01-11 00:55:51,025 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:56:41] 2026-01-11 00:55:51,067 | INFO     | all job control threads have been joined
[2026-01-10 19:56:41] 2026-01-11 00:55:51,130 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:56:41] 2026-01-11 00:55:51,180 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:56:41] 2026-01-11 00:55:51,191 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:56:41] 2026-01-11 00:55:51,196 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:56:41] 2026-01-11 00:55:51,520 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:56:41] 2026-01-11 00:55:51,813 | INFO     | [payload] control thread has finished
[2026-01-10 19:56:41] 2026-01-11 00:55:51,858 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:56:41] 2026-01-11 00:55:52,072 | INFO     | [job] control thread has finished
[2026-01-10 19:56:41] 2026-01-11 00:55:52,373 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:56:41] 2026-01-11 00:55:52,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:56:41] 2026-01-11 00:55:53,378 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:56:41] 2026-01-11 00:55:56,572 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:56:41] 2026-01-11 00:56:00,260 | INFO     | job.realtimelogging is not enabled
[2026-01-10 19:56:41] 2026-01-11 00:56:01,265 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:56:41] 2026-01-11 00:56:20,684 | INFO     | PID=740611 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 19:56:41] 2026-01-11 00:56:20,684 | INFO     | .. there are 29 such processes running
[2026-01-10 19:56:41] 2026-01-11 00:56:20,684 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:56:41] 2026-01-11 00:56:20,684 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:56:41] 2026-01-11 00:56:20,684 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:56:41] 2026-01-11 00:56:34,783 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:56:41] 2026-01-11 00:56:36,278 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140043629979456)>', '<ExcThread(monitor, started 140043263907584)>']
[2026-01-10 19:56:41] 2026-01-11 00:56:36,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:56:41] 2026-01-11 00:56:36,767 | INFO     | [monitor] control thread has ended
[2026-01-10 19:56:41] 2026-01-11 00:56:41,303 | INFO     | all workflow threads have been joined
[2026-01-10 19:56:41] 2026-01-11 00:56:41,303 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:56:41] 2026-01-11 00:56:41,303 | INFO     | traces error code: 0
[2026-01-10 19:56:41] 2026-01-11 00:56:41,303 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:56:41] 2026-01-11 00:56:41,424 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:56:41] 2026-01-11 00:56:41,428 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:56:41] 2026-01-11 00:56:41,431 [wrapper] pilotpid: 740611
[2026-01-10 19:56:41] 2026-01-11 00:56:41,434 [wrapper] Pilot exit status: 0
[2026-01-10 19:56:41] 2026-01-11 00:56:41,445 [wrapper] pandaids: 6965803186
[2026-01-10 19:56:41] 2026-01-11 00:56:41,558 [wrapper] cleanup supervisor_pilot 1053430 740613
[2026-01-10 19:56:41] 2026-01-11 00:56:41,562 [wrapper] Test setup, not cleaning
[2026-01-10 19:56:41] 2026-01-11 00:56:41,565 [wrapper] apfmon messages muted
[2026-01-10 19:56:41] 2026-01-11 00:56:41,567 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:56:41] 2026-01-11 00:56:41,569 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:56:41]  *** Error codes and diagnostics ***
[2026-01-10 19:56:41]     "exeErrorCode": 0,
[2026-01-10 19:56:41]     "exeErrorDiag": "",
[2026-01-10 19:56:41]     "pilotErrorCode": 0,
[2026-01-10 19:56:41]     "pilotErrorDiag": "",
[2026-01-10 19:56:41]  *** Listing of results directory ***
[2026-01-10 19:56:41] total 433984
[2026-01-10 19:56:41] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:56:41] -rwx------. 1 boincer umatlas     36322 Jan 10 18:05 runpilot2-wrapper.sh
[2026-01-10 19:56:41] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 19:56:41] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:56:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:52 run_atlas
[2026-01-10 19:56:41] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:52 job.xml
[2026-01-10 19:56:41] -rw-r--r--. 2 boincer umatlas 392017497 Jan 10 18:52 EVNT.47962006._000005.pool.root.1
[2026-01-10 19:56:41] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:52 start_atlas.sh
[2026-01-10 19:56:41] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:52 shared
[2026-01-10 19:56:41] -rw-r--r--. 2 boincer umatlas    592615 Jan 10 18:52 input.tar.gz
[2026-01-10 19:56:41] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:52 boinc_lockfile
[2026-01-10 19:56:41] -rw-r--r--. 1 boincer umatlas      2888 Jan 10 18:52 pandaJob.out
[2026-01-10 19:56:41] -rw-------. 1 boincer umatlas        57 Jan 10 18:52 setup.sh.local
[2026-01-10 19:56:41] -rw-------. 1 boincer umatlas    989548 Jan 10 18:53 agis_schedconf.cvmfs.json
[2026-01-10 19:56:41] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:53 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:56:41] drwx------. 5 boincer umatlas      4096 Jan 10 18:53 pilot3
[2026-01-10 19:56:41] -rw-r--r--. 1 boincer umatlas       529 Jan 10 19:51 boinc_task_state.xml
[2026-01-10 19:56:41] -rw-r--r--. 1 boincer umatlas      7170 Jan 10 19:54 init_data.xml
[2026-01-10 19:56:41] -rw-------. 1 boincer umatlas  45038292 Jan 10 19:55 HITS.47962010._002638.pool.root.1
[2026-01-10 19:56:41] -rw-------. 1 boincer umatlas      1035 Jan 10 19:55 memory_monitor_summary.json
[2026-01-10 19:56:41] -rw-------. 1 boincer umatlas        95 Jan 10 19:55 pilot_heartbeat.json
[2026-01-10 19:56:41] -rw-------. 1 boincer umatlas   1171225 Jan 10 19:55 log.47962010._002638.job.log.tgz.1
[2026-01-10 19:56:41] -rw-------. 1 boincer umatlas      8515 Jan 10 19:55 heartbeat.json
[2026-01-10 19:56:41] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 19:56 boinc_mmap_file
[2026-01-10 19:56:41] -rw-r--r--. 1 boincer umatlas        26 Jan 10 19:56 wrapper_checkpoint.txt
[2026-01-10 19:56:41] -rw-------. 1 boincer umatlas      4896 Jan 10 19:56 pilotlog.txt
[2026-01-10 19:56:41] -rw-------. 1 boincer umatlas    542400 Jan 10 19:56 log.47962010._002638.job.log.1
[2026-01-10 19:56:41] -rw-------. 1 boincer umatlas       353 Jan 10 19:56 output.list
[2026-01-10 19:56:41] -rw-r--r--. 1 boincer umatlas       620 Jan 10 19:56 runtime_log
[2026-01-10 19:56:41] -rw-------. 1 boincer umatlas   1730560 Jan 10 19:56 result.tar.gz
[2026-01-10 19:56:41] -rw-------. 1 boincer umatlas       651 Jan 10 19:56 SwcNDm9Bxy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmExmKDmOExoPm.diag
[2026-01-10 19:56:41] -rw-r--r--. 1 boincer umatlas      9337 Jan 10 19:56 runtime_log.err
[2026-01-10 19:56:41] -rw-r--r--. 1 boincer umatlas     22077 Jan 10 19:56 stderr.txt
[2026-01-10 19:56:41] HITS file was successfully produced:
[2026-01-10 19:56:41] -rw-------. 1 boincer umatlas 45038292 Jan 10 19:55 shared/HITS.pool.root.1
[2026-01-10 19:56:41]  *** Contents of shared directory: ***
[2026-01-10 19:56:41] total 429108
[2026-01-10 19:56:41] -rw-r--r--. 2 boincer umatlas 392017497 Jan 10 18:52 ATLAS.root_0
[2026-01-10 19:56:41] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:52 start_atlas.sh
[2026-01-10 19:56:41] -rw-r--r--. 2 boincer umatlas    592615 Jan 10 18:52 input.tar.gz
[2026-01-10 19:56:41] -rw-------. 1 boincer umatlas  45038292 Jan 10 19:55 HITS.pool.root.1
[2026-01-10 19:56:41] -rw-------. 1 boincer umatlas   1730560 Jan 10 19:56 result.tar.gz
19:56:43 (725517): run_atlas exited; CPU time 8653.044122
19:56:43 (725517): called boinc_finish(0)

</stderr_txt>
]]>

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