Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:42:51 (2971993): wrapper (7.7.26015): starting
19:42:51 (2971993): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 19:42:51] Arguments: --nthreads 9
[2026-01-10 19:42:51] Threads: 9
[2026-01-10 19:42:51] Checking for CVMFS
[2026-01-10 19:42:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 19:42:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 19:42:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 19:42:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 19:42:53] 2.13.3.0 9651 25713 249060 154998 0 357 34667462 40960000 15260 16776704 0 20924673 99.676 22366928 40067 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 19:42:53] CVMFS is ok
[2026-01-10 19:42:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 19:42:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 19:42:53] Further information can be found at the LHC@home message board.
[2026-01-10 19:42:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 19:42:53] Checking for apptainer binary...
[2026-01-10 19:42:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 19:42:53] Running /usr/bin/apptainer --version
[2026-01-10 19:42:53] apptainer version 1.4.5-2.el9
[2026-01-10 19:42:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 19:42:53] c-210-35-4.aglt2.org
[2026-01-10 19:42:53] apptainer works
[2026-01-10 19:42:53] Set ATHENA_PROC_NUMBER=9
[2026-01-10 19:42:53] Set ATHENA_CORE_NUMBER=9
[2026-01-10 19:43:14] Starting ATLAS job with PandaID=6965803402
[2026-01-10 19:43:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 21:46:59]  *** The last 200 lines of the pilot log: ***
[2026-01-10 21:46:59] 2026-01-11 02:46:22,596 | INFO     | executing command: lscpu
[2026-01-10 21:46:59] 2026-01-11 02:46:22,647 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 21:46:59] 2026-01-11 02:46:22,883 | INFO     | monitor loop #446: job 0:6965803402 is in state 'finished'
[2026-01-10 21:46:59] 2026-01-11 02:46:22,884 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:46:59] 2026-01-11 02:46:23,242 | INFO     | time since job start (7367s) is within the limit (349056.0s)
[2026-01-10 21:46:59] 2026-01-11 02:46:24,548 | INFO     | PID=2976233 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 21:46:59] 2026-01-11 02:46:24,549 | INFO     | .. there are 15 such processes running
[2026-01-10 21:46:59] 2026-01-11 02:46:25,386 | INFO     | monitor loop #447: job 0:6965803402 is in state 'finished'
[2026-01-10 21:46:59] 2026-01-11 02:46:25,387 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:46:59] 2026-01-11 02:46:25,549 | INFO     | time since job start (7369s) is within the limit (349056.0s)
[2026-01-10 21:46:59] 2026-01-11 02:46:26,591 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 21:46:59] 2026-01-11 02:46:26,598 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3135.1664107142838
[2026-01-10 21:46:59] 2026-01-11 02:46:26,607 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965803402/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 21:46:59] 2026-01-11 02:46:26,608 | INFO     | extracted standard info from prmon json
[2026-01-10 21:46:59] 2026-01-11 02:46:26,608 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 21:46:59] 2026-01-11 02:46:26,608 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 21:46:59] 2026-01-11 02:46:26,610 | INFO     | fitting pss+swap vs Time
[2026-01-10 21:46:59] 2026-01-11 02:46:26,611 | INFO     | sum of square deviations: 535339118.59166664
[2026-01-10 21:46:59] 2026-01-11 02:46:26,611 | INFO     | sum of deviations: 24216327566.574986
[2026-01-10 21:46:59] 2026-01-11 02:46:26,611 | INFO     | mean x: 1768095890.8083334
[2026-01-10 21:46:59] 2026-01-11 02:46:26,611 | INFO     | mean y: 2554813.025
[2026-01-10 21:46:59] 2026-01-11 02:46:26,612 | INFO     | intersect: -79978129904.29823
[2026-01-10 21:46:59] 2026-01-11 02:46:26,612 | INFO     | chi2: 3.9053099734903403
[2026-01-10 21:46:59] 2026-01-11 02:46:26,612 | INFO     | sum of square deviations: 471199115.7913052
[2026-01-10 21:46:59] 2026-01-11 02:46:26,612 | INFO     | sum of deviations: 41259440859.96521
[2026-01-10 21:46:59] 2026-01-11 02:46:26,613 | INFO     | mean x: 1768095738.4086957
[2026-01-10 21:46:59] 2026-01-11 02:46:26,613 | INFO     | mean y: 2594906.2347826087
[2026-01-10 21:46:59] 2026-01-11 02:46:26,613 | INFO     | intersect: -154816544410.52927
[2026-01-10 21:46:59] 2026-01-11 02:46:26,613 | INFO     | chi2: 2.9543796574350245
[2026-01-10 21:46:59] 2026-01-11 02:46:26,613 | INFO     | current chi2=2.9543796574350245 (change=24.349675762239922 %)
[2026-01-10 21:46:59] 2026-01-11 02:46:26,613 | INFO     | right removable region: 114
[2026-01-10 21:46:59] 2026-01-11 02:46:26,613 | INFO     | sum of square deviations: 471030145.7913052
[2026-01-10 21:46:59] 2026-01-11 02:46:26,614 | INFO     | sum of deviations: -8911484525.869564
[2026-01-10 21:46:59] 2026-01-11 02:46:26,614 | INFO     | mean x: 1768096043.4086957
[2026-01-10 21:46:59] 2026-01-11 02:46:26,614 | INFO     | mean y: 2632940.8695652173
[2026-01-10 21:46:59] 2026-01-11 02:46:26,614 | INFO     | intersect: 33453486717.15592
[2026-01-10 21:46:59] 2026-01-11 02:46:26,614 | INFO     | chi2: 1.0432323822959022
[2026-01-10 21:46:59] 2026-01-11 02:46:26,614 | INFO     | current chi2=1.0432323822959022 (change=73.2868225729206 %)
[2026-01-10 21:46:59] 2026-01-11 02:46:26,614 | INFO     | sum of square deviations: 412140405.41818273
[2026-01-10 21:46:59] 2026-01-11 02:46:26,615 | INFO     | sum of deviations: -10311759057.545454
[2026-01-10 21:46:59] 2026-01-11 02:46:26,615 | INFO     | mean x: 1768096195.9272728
[2026-01-10 21:46:59] 2026-01-11 02:46:26,615 | INFO     | mean y: 2636528.6818181816
[2026-01-10 21:46:59] 2026-01-11 02:46:26,615 | INFO     | intersect: 44240429579.97276
[2026-01-10 21:46:59] 2026-01-11 02:46:26,615 | INFO     | chi2: 1.0339230543929259
[2026-01-10 21:46:59] 2026-01-11 02:46:26,615 | INFO     | current chi2=1.0339230543929259 (change=0.8923541926956639 %)
[2026-01-10 21:46:59] 2026-01-11 02:46:26,615 | INFO     | left removable region: 20
[2026-01-10 21:46:59] 2026-01-11 02:46:26,615 | INFO     | sum of square deviations: 257221913.92553166
[2026-01-10 21:46:59] 2026-01-11 02:46:26,616 | INFO     | sum of deviations: 6816891332.106382
[2026-01-10 21:46:59] 2026-01-11 02:46:26,616 | INFO     | mean x: 1768096317.819149
[2026-01-10 21:46:59] 2026-01-11 02:46:26,616 | INFO     | mean y: 2691536.829787234
[2026-01-10 21:46:59] 2026-01-11 02:46:26,616 | INFO     | intersect: -46855370746.15288
[2026-01-10 21:46:59] 2026-01-11 02:46:26,616 | INFO     | chi2: 0.023468771725837865
[2026-01-10 21:46:59] 2026-01-11 02:46:26,616 | INFO     | current memory leak: 26.50 B/s (using 94 data points, chi2=0.02)
[2026-01-10 21:46:59] 2026-01-11 02:46:26,617 | INFO     | could have reported an average CPU frequency of 3035 MHz (8 samples)
[2026-01-10 21:46:59] 2026-01-11 02:46:26,617 | INFO     | ..............................
[2026-01-10 21:46:59] 2026-01-11 02:46:26,617 | INFO     | . Timing measurements:
[2026-01-10 21:46:59] 2026-01-11 02:46:26,617 | INFO     | . get job = 0 s
[2026-01-10 21:46:59] 2026-01-11 02:46:26,617 | INFO     | . initial setup = 3 s
[2026-01-10 21:46:59] 2026-01-11 02:46:26,617 | INFO     | . payload setup = 10 s
[2026-01-10 21:46:59] 2026-01-11 02:46:26,617 | INFO     | . stage-in = 0 s
[2026-01-10 21:46:59] 2026-01-11 02:46:26,617 | INFO     | . payload execution = 7327 s
[2026-01-10 21:46:59] 2026-01-11 02:46:26,617 | INFO     | . stage-out = 0 s
[2026-01-10 21:46:59] 2026-01-11 02:46:26,617 | INFO     | . log creation = 0 s
[2026-01-10 21:46:59] 2026-01-11 02:46:26,617 | INFO     | ..............................
[2026-01-10 21:46:59] 2026-01-11 02:46:27,100 | INFO     | 
[2026-01-10 21:46:59] 2026-01-11 02:46:27,100 | INFO     | job summary report
[2026-01-10 21:46:59] 2026-01-11 02:46:27,100 | INFO     | --------------------------------------------------
[2026-01-10 21:46:59] 2026-01-11 02:46:27,100 | INFO     | PanDA job id: 6965803402
[2026-01-10 21:46:59] 2026-01-11 02:46:27,100 | INFO     | task id: 47962010
[2026-01-10 21:46:59] 2026-01-11 02:46:27,100 | INFO     | errors: (none)
[2026-01-10 21:46:59] 2026-01-11 02:46:27,101 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 21:46:59] 2026-01-11 02:46:27,101 | INFO     | pilot state: finished 
[2026-01-10 21:46:59] 2026-01-11 02:46:27,101 | INFO     | transexitcode: 0
[2026-01-10 21:46:59] 2026-01-11 02:46:27,101 | INFO     | exeerrorcode: 0
[2026-01-10 21:46:59] 2026-01-11 02:46:27,101 | INFO     | exeerrordiag: 
[2026-01-10 21:46:59] 2026-01-11 02:46:27,101 | INFO     | exitcode: 0
[2026-01-10 21:46:59] 2026-01-11 02:46:27,101 | INFO     | exitmsg: OK
[2026-01-10 21:46:59] 2026-01-11 02:46:27,101 | INFO     | cpuconsumptiontime: 14194 s
[2026-01-10 21:46:59] 2026-01-11 02:46:27,101 | INFO     | nevents: 50
[2026-01-10 21:46:59] 2026-01-11 02:46:27,101 | INFO     | neventsw: 0
[2026-01-10 21:46:59] 2026-01-11 02:46:27,101 | INFO     | pid: 2983016
[2026-01-10 21:46:59] 2026-01-11 02:46:27,101 | INFO     | pgrp: 2983016
[2026-01-10 21:46:59] 2026-01-11 02:46:27,101 | INFO     | corecount: 9
[2026-01-10 21:46:59] 2026-01-11 02:46:27,101 | INFO     | event service: False
[2026-01-10 21:46:59] 2026-01-11 02:46:27,101 | INFO     | sizes: {0: 2284400, 1: 2284599, 9: 2284861, 12: 2284889, 7342: 2312960, 7343: 2312959, 7344: 2322193, 7350: 2322383}
[2026-01-10 21:46:59] 2026-01-11 02:46:27,101 | INFO     | --------------------------------------------------
[2026-01-10 21:46:59] 2026-01-11 02:46:27,101 | INFO     | 
[2026-01-10 21:46:59] 2026-01-11 02:46:27,102 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 21:46:59] 2026-01-11 02:46:27,120 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 21:46:59] 2026-01-11 02:46:27,120 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 21:46:59] 2026-01-11 02:46:27,120 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 21:46:59] 2026-01-11 02:46:27,120 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 21:46:59] 2026-01-11 02:46:27,120 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 21:46:59] 2026-01-11 02:46:27,120 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 21:46:59] 2026-01-11 02:46:27,120 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 21:46:59] 2026-01-11 02:46:27,121 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 21:46:59] 2026-01-11 02:46:27,121 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 21:46:59] 2026-01-11 02:46:27,121 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 21:46:59] 2026-01-11 02:46:27,121 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 21:46:59] 2026-01-11 02:46:27,121 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 21:46:59] 2026-01-11 02:46:27,121 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 21:46:59] 2026-01-11 02:46:27,121 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 21:46:59] 2026-01-11 02:46:27,121 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 21:46:59] 2026-01-11 02:46:27,121 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 21:46:59] 2026-01-11 02:46:27,121 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 21:46:59] 2026-01-11 02:46:27,121 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 21:46:59] 2026-01-11 02:46:27,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 21:46:59] 2026-01-11 02:46:27,121 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 21:46:59] 2026-01-11 02:46:27,121 | INFO     | job 6965803402 has completed (purged errors)
[2026-01-10 21:46:59] 2026-01-11 02:46:27,122 | INFO     | overall cleanup function is called
[2026-01-10 21:46:59] 2026-01-11 02:46:28,135 | INFO     | --- collectZombieJob: --- 10, [2983016]
[2026-01-10 21:46:59] 2026-01-11 02:46:28,135 | INFO     | zombie collector waiting for pid 2983016
[2026-01-10 21:46:59] 2026-01-11 02:46:28,136 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 21:46:59] 2026-01-11 02:46:28,136 | INFO     | collected zombie processes
[2026-01-10 21:46:59] 2026-01-11 02:46:28,136 | INFO     | will attempt to kill all subprocesses of pid=2983016
[2026-01-10 21:46:59] 2026-01-11 02:46:28,367 | INFO     | process IDs to be killed: [2983016] (in reverse order)
[2026-01-10 21:46:59] 2026-01-11 02:46:28,458 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 21:46:59] 2026-01-11 02:46:28,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 21:46:59] 2026-01-11 02:46:28,470 | INFO     | did not find any defunct processes belonging to 2983016
[2026-01-10 21:46:59] 2026-01-11 02:46:28,482 | INFO     | did not find any defunct processes belonging to 2983016
[2026-01-10 21:46:59] 2026-01-11 02:46:28,482 | INFO     | ready for new job
[2026-01-10 21:46:59] 2026-01-11 02:46:28,482 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 21:46:59] 2026-01-11 02:46:28,484 | INFO     | ***************************************
[2026-01-10 21:46:59] 2026-01-11 02:46:28,485 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 21:46:59] 2026-01-11 02:46:28,485 | INFO     | ***************************************
[2026-01-10 21:46:59] 2026-01-11 02:46:28,485 | INFO     | 
[2026-01-10 21:46:59] 2026-01-11 02:46:28,489 | INFO     | architecture information:
[2026-01-10 21:46:59] 2026-01-11 02:46:28,489 | INFO     | executing command: cat /etc/os-release
[2026-01-10 21:46:59] 2026-01-11 02:46:28,505 | INFO     | cat /etc/os-release:
[2026-01-10 21:46:59] NAME="CentOS Linux"
[2026-01-10 21:46:59] VERSION="7 (Core)"
[2026-01-10 21:46:59] ID="centos"
[2026-01-10 21:46:59] ID_LIKE="rhel fedora"
[2026-01-10 21:46:59] VERSION_ID="7"
[2026-01-10 21:46:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 21:46:59] ANSI_COLOR="0;31"
[2026-01-10 21:46:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 21:46:59] HOME_URL="https://www.centos.org/"
[2026-01-10 21:46:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 21:46:59] 
[2026-01-10 21:46:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 21:46:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 21:46:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 21:46:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 21:46:59] 
[2026-01-10 21:46:59] 2026-01-11 02:46:28,506 | INFO     | ***************************************
[2026-01-10 21:46:59] 2026-01-11 02:46:29,008 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 21:46:59] 2026-01-11 02:46:29,031 | INFO     | sufficient remaining disk space (75321311232 B)
[2026-01-10 21:46:59] 2026-01-11 02:46:29,031 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 21:46:59] 2026-01-11 02:46:29,032 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 21:46:59] 2026-01-11 02:46:29,032 | INFO     | update_server=False
[2026-01-10 21:46:59] 2026-01-11 02:46:29,032 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 21:46:59] 2026-01-11 02:46:29,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 21:46:59] 2026-01-11 02:46:29,032 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:46:59] 2026-01-11 02:46:29,033 | INFO     | aborting loop
[2026-01-10 21:46:59] 2026-01-11 02:46:29,446 | INFO     | all data control threads have been joined
[2026-01-10 21:46:59] 2026-01-11 02:46:30,037 | INFO     | [job] retrieve thread has finished
[2026-01-10 21:46:59] 2026-01-11 02:46:30,037 | INFO     | [job] job monitor thread has finished
[2026-01-10 21:46:59] 2026-01-11 02:46:30,039 | INFO     | all job control threads have been joined
[2026-01-10 21:46:59] 2026-01-11 02:46:30,150 | INFO     | all payload control threads have been joined
[2026-01-10 21:46:59] 2026-01-11 02:46:30,422 | INFO     | [data] copytool_in thread has finished
[2026-01-10 21:46:59] 2026-01-11 02:46:30,451 | INFO     | [data] control thread has finished
[2026-01-10 21:46:59] 2026-01-11 02:46:30,507 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 21:46:59] 2026-01-11 02:46:30,709 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 21:46:59] 2026-01-11 02:46:30,804 | INFO     | [job] validate thread has finished
[2026-01-10 21:46:59] 2026-01-11 02:46:30,835 | INFO     | [payload] failed_post thread has finished
[2026-01-10 21:46:59] 2026-01-11 02:46:30,998 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 21:46:59] 2026-01-11 02:46:31,037 | INFO     | [data] copytool_out thread has finished
[2026-01-10 21:46:59] 2026-01-11 02:46:31,044 | INFO     | [job] control thread has finished
[2026-01-10 21:46:59] 2026-01-11 02:46:31,156 | INFO     | [payload] control thread has finished
[2026-01-10 21:46:59] 2026-01-11 02:46:31,232 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 21:46:59] 2026-01-11 02:46:31,604 | INFO     | [payload] validate_post thread has finished
[2026-01-10 21:46:59] 2026-01-11 02:46:31,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:46:59] 2026-01-11 02:46:32,715 | INFO     | [job] queue monitor thread has finished
[2026-01-10 21:46:59] 2026-01-11 02:46:35,004 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 21:46:59] 2026-01-11 02:46:39,449 | INFO     | job.realtimelogging is not enabled
[2026-01-10 21:46:59] 2026-01-11 02:46:40,454 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 21:46:59] 2026-01-11 02:46:49,043 | INFO     | [monitor] cgroup control has ended
[2026-01-10 21:46:59] 2026-01-11 02:46:50,049 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139706314651456)>', '<ExcThread(monitor, started 139705756677888)>']
[2026-01-10 21:46:59] 2026-01-11 02:46:55,074 | INFO     | all workflow threads have been joined
[2026-01-10 21:46:59] 2026-01-11 02:46:55,074 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 21:46:59] 2026-01-11 02:46:55,075 | INFO     | traces error code: 0
[2026-01-10 21:46:59] 2026-01-11 02:46:55,075 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 21:46:59] 2026-01-11 02:46:58,970 | INFO     | PID=2976233 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 21:46:59] 2026-01-11 02:46:58,970 | INFO     | .. there are 15 such processes running
[2026-01-10 21:46:59] 2026-01-11 02:46:58,970 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 21:46:59] 2026-01-11 02:46:58,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 21:46:59] 2026-01-11 02:46:58,971 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 21:46:59] 2026-01-11 02:46:58,971 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 21:46:59] 2026-01-11 02:46:58,971 | INFO     | [monitor] control thread has ended
[2026-01-10 21:46:59] 2026-01-11 02:46:59,148 [wrapper] ==== pilot stdout END ====
[2026-01-10 21:46:59] 2026-01-11 02:46:59,151 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 21:46:59] 2026-01-11 02:46:59,153 [wrapper] pilotpid: 2976233
[2026-01-10 21:46:59] 2026-01-11 02:46:59,156 [wrapper] Pilot exit status: 0
[2026-01-10 21:46:59] 2026-01-11 02:46:59,167 [wrapper] pandaids: 6965803402
[2026-01-10 21:46:59] 2026-01-11 02:46:59,232 [wrapper] cleanup supervisor_pilot 3312969 2976234
[2026-01-10 21:46:59] 2026-01-11 02:46:59,236 [wrapper] Test setup, not cleaning
[2026-01-10 21:46:59] 2026-01-11 02:46:59,239 [wrapper] apfmon messages muted
[2026-01-10 21:46:59] 2026-01-11 02:46:59,242 [wrapper] ==== wrapper stdout END ====
[2026-01-10 21:46:59] 2026-01-11 02:46:59,244 [wrapper] ==== wrapper stderr END ====
[2026-01-10 21:46:59]  *** Error codes and diagnostics ***
[2026-01-10 21:46:59]     "exeErrorCode": 0,
[2026-01-10 21:46:59]     "exeErrorDiag": "",
[2026-01-10 21:46:59]     "pilotErrorCode": 0,
[2026-01-10 21:46:59]     "pilotErrorDiag": "",
[2026-01-10 21:46:59]  *** Listing of results directory ***
[2026-01-10 21:46:59] total 433376
[2026-01-10 21:46:59] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 21:46:59] -rwx------. 1 boincer umatlas     36322 Jan 10 18:05 runpilot2-wrapper.sh
[2026-01-10 21:46:59] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 21:46:59] -rw-r--r--. 1 boincer umatlas       100 Jan 10 19:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 21:46:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 19:42 run_atlas
[2026-01-10 21:46:59] -rw-r--r--. 1 boincer umatlas       105 Jan 10 19:42 job.xml
[2026-01-10 21:46:59] -rw-r--r--. 2 boincer umatlas 392167382 Jan 10 19:42 EVNT.47962006._000121.pool.root.1
[2026-01-10 21:46:59] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 19:42 start_atlas.sh
[2026-01-10 21:46:59] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 19:42 shared
[2026-01-10 21:46:59] -rw-r--r--. 2 boincer umatlas    592605 Jan 10 19:42 input.tar.gz
[2026-01-10 21:46:59] -rw-r--r--. 1 boincer umatlas         0 Jan 10 19:42 boinc_lockfile
[2026-01-10 21:46:59] -rw-r--r--. 1 boincer umatlas      2891 Jan 10 19:42 pandaJob.out
[2026-01-10 21:46:59] -rw-------. 1 boincer umatlas        57 Jan 10 19:43 setup.sh.local
[2026-01-10 21:46:59] -rw-------. 1 boincer umatlas    989540 Jan 10 19:43 agis_schedconf.cvmfs.json
[2026-01-10 21:46:59] -rw-------. 1 boincer umatlas   1516240 Jan 10 19:43 agis_ddmendpoints.agis.ALL.json
[2026-01-10 21:46:59] drwx------. 5 boincer umatlas      4096 Jan 10 19:43 pilot3
[2026-01-10 21:46:59] -rw-r--r--. 1 boincer umatlas       530 Jan 10 21:38 boinc_task_state.xml
[2026-01-10 21:46:59] -rw-------. 1 boincer umatlas  43051362 Jan 10 21:46 HITS.47962010._002854.pool.root.1
[2026-01-10 21:46:59] -rw-------. 1 boincer umatlas      1041 Jan 10 21:46 memory_monitor_summary.json
[2026-01-10 21:46:59] -rw-------. 1 boincer umatlas   1349934 Jan 10 21:46 log.47962010._002854.job.log.tgz.1
[2026-01-10 21:46:59] -rw-------. 1 boincer umatlas        95 Jan 10 21:46 pilot_heartbeat.json
[2026-01-10 21:46:59] -rw-------. 1 boincer umatlas      8575 Jan 10 21:46 heartbeat.json
[2026-01-10 21:46:59] -rw-r--r--. 1 boincer umatlas      6840 Jan 10 21:46 init_data.xml
[2026-01-10 21:46:59] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 21:46 boinc_mmap_file
[2026-01-10 21:46:59] -rw-r--r--. 1 boincer umatlas        27 Jan 10 21:46 wrapper_checkpoint.txt
[2026-01-10 21:46:59] -rw-------. 1 boincer umatlas       823 Jan 10 21:46 pilotlog.txt
[2026-01-10 21:46:59] -rw-------. 1 boincer umatlas    970387 Jan 10 21:46 log.47962010._002854.job.log.1
[2026-01-10 21:46:59] -rw-------. 1 boincer umatlas       353 Jan 10 21:46 output.list
[2026-01-10 21:46:59] -rw-r--r--. 1 boincer umatlas       620 Jan 10 21:46 runtime_log
[2026-01-10 21:46:59] -rw-------. 1 boincer umatlas   2344960 Jan 10 21:46 result.tar.gz
[2026-01-10 21:46:59] -rw-------. 1 boincer umatlas       655 Jan 10 21:46 ZSYLDmJCxy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNfhKDmpSbojm.diag
[2026-01-10 21:46:59] -rw-r--r--. 1 boincer umatlas      9352 Jan 10 21:46 runtime_log.err
[2026-01-10 21:46:59] -rw-r--r--. 1 boincer umatlas     21544 Jan 10 21:46 stderr.txt
[2026-01-10 21:46:59] HITS file was successfully produced:
[2026-01-10 21:46:59] -rw-------. 1 boincer umatlas 43051362 Jan 10 21:46 shared/HITS.pool.root.1
[2026-01-10 21:46:59]  *** Contents of shared directory: ***
[2026-01-10 21:46:59] total 427912
[2026-01-10 21:46:59] -rw-r--r--. 2 boincer umatlas 392167382 Jan 10 19:42 ATLAS.root_0
[2026-01-10 21:46:59] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 19:42 start_atlas.sh
[2026-01-10 21:46:59] -rw-r--r--. 2 boincer umatlas    592605 Jan 10 19:42 input.tar.gz
[2026-01-10 21:46:59] -rw-------. 1 boincer umatlas  43051362 Jan 10 21:46 HITS.pool.root.1
[2026-01-10 21:46:59] -rw-------. 1 boincer umatlas   2344960 Jan 10 21:46 result.tar.gz
21:47:00 (2971993): run_atlas exited; CPU time 14211.547871
21:47:00 (2971993): called boinc_finish(0)

</stderr_txt>
]]>

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