Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:30:20 (1997876): wrapper (7.7.26015): starting
18:30:20 (1997876): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 18:30:20] Arguments: --nthreads 9
[2026-01-10 18:30:20] Threads: 9
[2026-01-10 18:30:20] Checking for CVMFS
[2026-01-10 18:30:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:30:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:30:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:30:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:30:21] 2.13.3.0 12497 95377 226708 154997 3 261 23146244 32935937 20918 16776704 0 495298401 99.477 685424762 37884 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 18:30:21] CVMFS is ok
[2026-01-10 18:30:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:30:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:30:21] Further information can be found at the LHC@home message board.
[2026-01-10 18:30:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:30:21] Checking for apptainer binary...
[2026-01-10 18:30:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:30:21] Running /usr/bin/apptainer --version
[2026-01-10 18:30:21] apptainer version 1.4.5-2.el9
[2026-01-10 18:30:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:30:21] c7-7-35.aglt2.org
[2026-01-10 18:30:21] apptainer works
[2026-01-10 18:30:21] Set ATHENA_PROC_NUMBER=9
[2026-01-10 18:30:21] Set ATHENA_CORE_NUMBER=9
[2026-01-10 18:30:21] Starting ATLAS job with PandaID=6965803405
[2026-01-10 18:30:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:58:49]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:58:49]  replicas=None
[2026-01-10 19:58:49]  scope=mc16_13TeV
[2026-01-10 19:58:49]  status=None
[2026-01-10 19:58:49]  status_code=0
[2026-01-10 19:58:49]  storage_token=
[2026-01-10 19:58:49]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6965803405/log.47962010._002857.job.log.tgz.1
[2026-01-10 19:58:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/c2/82/log.47962010._002857.job.log.tgz.1
[2026-01-10 19:58:49]  workdir=None
[2026-01-10 19:58:49] ]
[2026-01-10 19:58:49] 2026-01-11 00:57:34,342 | INFO     | transferring file log.47962010._002857.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6965803405/log.47962010._002857.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 19:58:49] 2026-01-11 00:57:34,343 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6965803405/log.47962010._002857.job.log.tgz.1 /tmp/boinchome/slots/1/log.47962010._002857.job
[2026-01-10 19:58:49] 2026-01-11 00:57:34,374 | INFO     | adding to output.list: log.47962010._002857.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/c2/82/log.47962010._002857.job.log.tgz.
[2026-01-10 19:58:49] 2026-01-11 00:57:34,378 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 19:58:49] 2026-01-11 00:57:34,378 | INFO     | summary of transferred files:
[2026-01-10 19:58:49] 2026-01-11 00:57:34,378 | INFO     |  -- lfn=log.47962010._002857.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 19:58:49] 2026-01-11 00:57:34,379 | INFO     | stage-out finished correctly
[2026-01-10 19:58:49] 2026-01-11 00:57:34,813 | INFO     | PID=2005062 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 19:58:49] 2026-01-11 00:57:34,814 | INFO     | .. there are 20 such processes running
[2026-01-10 19:58:49] 2026-01-11 00:57:35,814 | INFO     | time since job start (5222s) is within the limit (349056.0s)
[2026-01-10 19:58:49] 2026-01-11 00:57:35,843 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 19:58:49] 2026-01-11 00:57:36,101 | INFO     | job 6965803405 has state=finished
[2026-01-10 19:58:49] 2026-01-11 00:57:36,101 | INFO     | preparing for final server update for job 6965803405 in state='finished'
[2026-01-10 19:58:49] 2026-01-11 00:57:36,101 | INFO     | this job has now completed (state=finished)
[2026-01-10 19:58:49] 2026-01-11 00:57:36,102 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 19:58:49] 2026-01-11 00:57:36,102 | INFO     | log transfer has been attempted: DONE
[2026-01-10 19:58:49] 2026-01-11 00:57:36,102 | INFO     | job 6965803405 has finished - writing final server update
[2026-01-10 19:58:49] 2026-01-11 00:57:36,102 | INFO     | total number of processed events: 50 (read)
[2026-01-10 19:58:49] 2026-01-11 00:57:36,113 | INFO     | executing command: lscpu
[2026-01-10 19:58:49] 2026-01-11 00:57:36,222 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 19:58:49] 2026-01-11 00:57:36,627 | INFO     | monitor loop #361: job 0:6965803405 is in state 'finished'
[2026-01-10 19:58:49] 2026-01-11 00:57:36,627 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:58:49] 2026-01-11 00:57:37,820 | INFO     | time since job start (5224s) is within the limit (349056.0s)
[2026-01-10 19:58:49] 2026-01-11 00:57:39,144 | INFO     | monitor loop #362: job 0:6965803405 is in state 'finished'
[2026-01-10 19:58:49] 2026-01-11 00:57:39,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:58:49] 2026-01-11 00:57:39,826 | INFO     | time since job start (5226s) is within the limit (349056.0s)
[2026-01-10 19:58:49] 2026-01-11 00:57:41,678 | INFO     | monitor loop #363: job 0:6965803405 is in state 'finished'
[2026-01-10 19:58:49] 2026-01-11 00:57:41,678 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:58:49] 2026-01-11 00:57:41,837 | INFO     | time since job start (5228s) is within the limit (349056.0s)
[2026-01-10 19:58:49] 2026-01-11 00:57:43,267 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 19:58:49] 2026-01-11 00:57:43,296 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3150.3769583333346
[2026-01-10 19:58:49] 2026-01-11 00:57:43,347 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965803405/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:58:49] 2026-01-11 00:57:43,348 | INFO     | extracted standard info from prmon json
[2026-01-10 19:58:49] 2026-01-11 00:57:43,348 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:58:49] 2026-01-11 00:57:43,348 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:58:49] 2026-01-11 00:57:43,349 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:58:49] 2026-01-11 00:57:43,354 | INFO     | sum of square deviations: 147204182.4615387
[2026-01-10 19:58:49] 2026-01-11 00:57:43,354 | INFO     | sum of deviations: 25732019092.923084
[2026-01-10 19:58:49] 2026-01-11 00:57:43,354 | INFO     | mean x: 1768090519.6153846
[2026-01-10 19:58:49] 2026-01-11 00:57:43,354 | INFO     | mean y: 2477663.730769231
[2026-01-10 19:58:49] 2026-01-11 00:57:43,354 | INFO     | intersect: -309068489261.04834
[2026-01-10 19:58:49] 2026-01-11 00:57:43,354 | INFO     | chi2: 1.737253853495411
[2026-01-10 19:58:49] 2026-01-11 00:57:43,355 | INFO     | current memory leak: 174.80 B/s (using 78 data points, chi2=1.74)
[2026-01-10 19:58:49] 2026-01-11 00:57:43,355 | INFO     | could have reported an average CPU frequency of 3184 MHz (6 samples)
[2026-01-10 19:58:49] 2026-01-11 00:57:43,355 | INFO     | ..............................
[2026-01-10 19:58:49] 2026-01-11 00:57:43,355 | INFO     | . Timing measurements:
[2026-01-10 19:58:49] 2026-01-11 00:57:43,355 | INFO     | . get job = 0 s
[2026-01-10 19:58:49] 2026-01-11 00:57:43,355 | INFO     | . initial setup = 2 s
[2026-01-10 19:58:49] 2026-01-11 00:57:43,355 | INFO     | . payload setup = 8 s
[2026-01-10 19:58:49] 2026-01-11 00:57:43,355 | INFO     | . stage-in = 0 s
[2026-01-10 19:58:49] 2026-01-11 00:57:43,355 | INFO     | . payload execution = 5189 s
[2026-01-10 19:58:49] 2026-01-11 00:57:43,355 | INFO     | . stage-out = 1 s
[2026-01-10 19:58:49] 2026-01-11 00:57:43,355 | INFO     | . log creation = 0 s
[2026-01-10 19:58:49] 2026-01-11 00:57:43,355 | INFO     | ..............................
[2026-01-10 19:58:49] 2026-01-11 00:57:43,725 | INFO     | 
[2026-01-10 19:58:49] 2026-01-11 00:57:43,727 | INFO     | job summary report
[2026-01-10 19:58:49] 2026-01-11 00:57:43,727 | INFO     | --------------------------------------------------
[2026-01-10 19:58:49] 2026-01-11 00:57:43,756 | INFO     | PanDA job id: 6965803405
[2026-01-10 19:58:49] 2026-01-11 00:57:43,756 | INFO     | task id: 47962010
[2026-01-10 19:58:49] 2026-01-11 00:57:43,756 | INFO     | errors: (none)
[2026-01-10 19:58:49] 2026-01-11 00:57:43,756 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:58:49] 2026-01-11 00:57:43,756 | INFO     | pilot state: finished 
[2026-01-10 19:58:49] 2026-01-11 00:57:43,756 | INFO     | transexitcode: 0
[2026-01-10 19:58:49] 2026-01-11 00:57:43,756 | INFO     | exeerrorcode: 0
[2026-01-10 19:58:49] 2026-01-11 00:57:43,757 | INFO     | exeerrordiag: 
[2026-01-10 19:58:49] 2026-01-11 00:57:43,757 | INFO     | exitcode: 0
[2026-01-10 19:58:49] 2026-01-11 00:57:43,757 | INFO     | exitmsg: OK
[2026-01-10 19:58:49] 2026-01-11 00:57:43,757 | INFO     | cpuconsumptiontime: 11123 s
[2026-01-10 19:58:49] 2026-01-11 00:57:43,757 | INFO     | nevents: 50
[2026-01-10 19:58:49] 2026-01-11 00:57:43,757 | INFO     | neventsw: 0
[2026-01-10 19:58:49] 2026-01-11 00:57:43,757 | INFO     | pid: 2024913
[2026-01-10 19:58:49] 2026-01-11 00:57:43,757 | INFO     | pgrp: 2024913
[2026-01-10 19:58:49] 2026-01-11 00:57:43,757 | INFO     | corecount: 9
[2026-01-10 19:58:49] 2026-01-11 00:57:43,757 | INFO     | event service: False
[2026-01-10 19:58:49] 2026-01-11 00:57:43,757 | INFO     | sizes: {0: 2284400, 1: 2284599, 7: 2284861, 11: 2284889, 5201: 2312149, 5204: 2321143, 5206: 2321327, 5213: 2321573}
[2026-01-10 19:58:49] 2026-01-11 00:57:43,757 | INFO     | --------------------------------------------------
[2026-01-10 19:58:49] 2026-01-11 00:57:43,757 | INFO     | 
[2026-01-10 19:58:49] 2026-01-11 00:57:43,758 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 19:58:49] 2026-01-11 00:57:43,850 | INFO     | time since job start (5230s) is within the limit (349056.0s)
[2026-01-10 19:58:49] 2026-01-11 00:57:43,911 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:58:49] 2026-01-11 00:57:43,911 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:58:49] 2026-01-11 00:57:43,911 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:58:49] 2026-01-11 00:57:43,911 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:58:49] 2026-01-11 00:57:43,911 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:58:49] 2026-01-11 00:57:43,911 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:58:49] 2026-01-11 00:57:43,911 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:58:49] 2026-01-11 00:57:43,912 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:58:49] 2026-01-11 00:57:43,912 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:58:49] 2026-01-11 00:57:43,913 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:58:49] 2026-01-11 00:57:43,913 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:58:49] 2026-01-11 00:57:43,913 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:58:49] 2026-01-11 00:57:43,913 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:58:49] 2026-01-11 00:57:43,913 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:58:49] 2026-01-11 00:57:43,913 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:58:49] 2026-01-11 00:57:43,913 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:58:49] 2026-01-11 00:57:43,913 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:58:49] 2026-01-11 00:57:43,913 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:58:49] 2026-01-11 00:57:43,913 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:58:49] 2026-01-11 00:57:43,914 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:58:49] 2026-01-11 00:57:43,914 | INFO     | job 6965803405 has completed (purged errors)
[2026-01-10 19:58:49] 2026-01-11 00:57:43,916 | INFO     | overall cleanup function is called
[2026-01-10 19:58:49] 2026-01-11 00:57:44,969 | INFO     | --- collectZombieJob: --- 10, [2024913]
[2026-01-10 19:58:49] 2026-01-11 00:57:44,969 | INFO     | zombie collector waiting for pid 2024913
[2026-01-10 19:58:49] 2026-01-11 00:57:44,969 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:58:49] 2026-01-11 00:57:44,969 | INFO     | collected zombie processes
[2026-01-10 19:58:49] 2026-01-11 00:57:44,969 | INFO     | will attempt to kill all subprocesses of pid=2024913
[2026-01-10 19:58:49] 2026-01-11 00:57:46,063 | INFO     | process IDs to be killed: [2024913] (in reverse order)
[2026-01-10 19:58:49] 2026-01-11 00:57:46,237 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:58:49] 2026-01-11 00:57:46,237 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:58:49] 2026-01-11 00:57:46,335 | INFO     | did not find any defunct processes belonging to 2024913
[2026-01-10 19:58:49] 2026-01-11 00:57:46,426 | INFO     | did not find any defunct processes belonging to 2024913
[2026-01-10 19:58:49] 2026-01-11 00:57:46,426 | INFO     | ready for new job
[2026-01-10 19:58:49] 2026-01-11 00:57:46,427 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:58:49] 2026-01-11 00:57:46,444 | INFO     | ***************************************
[2026-01-10 19:58:49] 2026-01-11 00:57:46,444 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:58:49] 2026-01-11 00:57:46,444 | INFO     | ***************************************
[2026-01-10 19:58:49] 2026-01-11 00:57:46,444 | INFO     | 
[2026-01-10 19:58:49] 2026-01-11 00:57:46,465 | INFO     | architecture information:
[2026-01-10 19:58:49] 2026-01-11 00:57:46,481 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:58:49] 2026-01-11 00:57:46,648 | INFO     | cat /etc/os-release:
[2026-01-10 19:58:49] NAME="CentOS Linux"
[2026-01-10 19:58:49] VERSION="7 (Core)"
[2026-01-10 19:58:49] ID="centos"
[2026-01-10 19:58:49] ID_LIKE="rhel fedora"
[2026-01-10 19:58:49] VERSION_ID="7"
[2026-01-10 19:58:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:58:49] ANSI_COLOR="0;31"
[2026-01-10 19:58:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:58:49] HOME_URL="https://www.centos.org/"
[2026-01-10 19:58:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:58:49] 
[2026-01-10 19:58:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:58:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:58:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:58:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:58:49] 
[2026-01-10 19:58:49] 2026-01-11 00:57:46,648 | INFO     | ***************************************
[2026-01-10 19:58:49] 2026-01-11 00:57:47,167 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 19:58:49] 2026-01-11 00:57:47,252 | INFO     | sufficient remaining disk space (74940678144 B)
[2026-01-10 19:58:49] 2026-01-11 00:57:47,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:58:49] 2026-01-11 00:57:47,253 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:58:49] 2026-01-11 00:57:47,253 | INFO     | update_server=False
[2026-01-10 19:58:49] 2026-01-11 00:57:47,253 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:58:49] 2026-01-11 00:57:47,254 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:58:49] 2026-01-11 00:57:47,501 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:58:49] 2026-01-11 00:57:47,709 | INFO     | all payload control threads have been joined
[2026-01-10 19:58:49] 2026-01-11 00:57:47,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:58:49] 2026-01-11 00:57:47,722 | INFO     | aborting loop
[2026-01-10 19:58:49] 2026-01-11 00:57:48,233 | INFO     | all data control threads have been joined
[2026-01-10 19:58:49] 2026-01-11 00:57:48,259 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:58:49] 2026-01-11 00:57:48,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:58:49] 2026-01-11 00:57:48,621 | INFO     | all job control threads have been joined
[2026-01-10 19:58:49] 2026-01-11 00:57:48,686 | INFO     | [job] validate thread has finished
[2026-01-10 19:58:49] 2026-01-11 00:57:48,715 | INFO     | [payload] control thread has finished
[2026-01-10 19:58:49] 2026-01-11 00:57:48,730 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:58:49] 2026-01-11 00:57:48,730 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:58:49] 2026-01-11 00:57:48,787 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:58:49] 2026-01-11 00:57:48,935 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:58:49] 2026-01-11 00:57:48,949 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:58:49] 2026-01-11 00:57:49,239 | INFO     | [data] control thread has finished
[2026-01-10 19:58:49] 2026-01-11 00:57:49,330 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:58:49] 2026-01-11 00:57:49,428 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:58:49] 2026-01-11 00:57:49,508 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:58:49] 2026-01-11 00:57:49,520 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:58:49] 2026-01-11 00:57:49,627 | INFO     | [job] control thread has finished
[2026-01-10 19:58:49] 2026-01-11 00:57:51,271 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:58:49] 2026-01-11 00:57:58,183 | INFO     | job.realtimelogging is not enabled
[2026-01-10 19:58:49] 2026-01-11 00:57:59,206 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:58:49] 2026-01-11 00:58:18,028 | INFO     | PID=2005062 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:58:49] 2026-01-11 00:58:18,028 | INFO     | .. there are 20 such processes running
[2026-01-10 19:58:49] 2026-01-11 00:58:18,029 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:58:49] 2026-01-11 00:58:18,029 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:58:49] 2026-01-11 00:58:18,029 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:58:49] 2026-01-11 00:58:41,614 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:58:49] 2026-01-11 00:58:43,108 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140436748076864)>', '<ExcThread(monitor, started 140435884332800)>']
[2026-01-10 19:58:49] 2026-01-11 00:58:43,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:58:49] 2026-01-11 00:58:43,227 | INFO     | [monitor] control thread has ended
[2026-01-10 19:58:49] 2026-01-11 00:58:48,134 | INFO     | all workflow threads have been joined
[2026-01-10 19:58:49] 2026-01-11 00:58:48,134 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:58:49] 2026-01-11 00:58:48,134 | INFO     | traces error code: 0
[2026-01-10 19:58:49] 2026-01-11 00:58:48,134 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:58:49] 2026-01-11 00:58:48,894 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:58:49] 2026-01-11 00:58:48,909 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:58:49] 2026-01-11 00:58:48,915 [wrapper] pilotpid: 2005062
[2026-01-10 19:58:49] 2026-01-11 00:58:48,918 [wrapper] Pilot exit status: 0
[2026-01-10 19:58:49] 2026-01-11 00:58:48,942 [wrapper] pandaids: 6965803405
[2026-01-10 19:58:49] 2026-01-11 00:58:49,126 [wrapper] cleanup supervisor_pilot 2348019 2005063
[2026-01-10 19:58:49] 2026-01-11 00:58:49,130 [wrapper] Test setup, not cleaning
[2026-01-10 19:58:49] 2026-01-11 00:58:49,132 [wrapper] apfmon messages muted
[2026-01-10 19:58:49] 2026-01-11 00:58:49,134 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:58:49] 2026-01-11 00:58:49,137 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:58:49]  *** Error codes and diagnostics ***
[2026-01-10 19:58:49]     "exeErrorCode": 0,
[2026-01-10 19:58:49]     "exeErrorDiag": "",
[2026-01-10 19:58:49]     "pilotErrorCode": 0,
[2026-01-10 19:58:49]     "pilotErrorDiag": "",
[2026-01-10 19:58:49]  *** Listing of results directory ***
[2026-01-10 19:58:49] total 435148
[2026-01-10 19:58:49] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:58:49] -rwx------. 1 boincer umatlas     36322 Jan 10 18:05 runpilot2-wrapper.sh
[2026-01-10 19:58:49] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 19:58:49] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:58:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:30 run_atlas
[2026-01-10 19:58:49] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:30 job.xml
[2026-01-10 19:58:49] -rw-r--r--. 2 boincer umatlas 392167382 Jan 10 18:30 EVNT.47962006._000121.pool.root.1
[2026-01-10 19:58:49] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:30 start_atlas.sh
[2026-01-10 19:58:49] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:30 shared
[2026-01-10 19:58:49] -rw-r--r--. 2 boincer umatlas    592608 Jan 10 18:30 input.tar.gz
[2026-01-10 19:58:49] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:30 boinc_lockfile
[2026-01-10 19:58:49] -rw-r--r--. 1 boincer umatlas      2891 Jan 10 18:30 pandaJob.out
[2026-01-10 19:58:49] -rw-------. 1 boincer umatlas        57 Jan 10 18:30 setup.sh.local
[2026-01-10 19:58:49] -rw-------. 1 boincer umatlas    989548 Jan 10 18:30 agis_schedconf.cvmfs.json
[2026-01-10 19:58:49] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:30 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:58:49] drwx------. 5 boincer umatlas      4096 Jan 10 18:30 pilot3
[2026-01-10 19:58:49] -rw-r--r--. 1 boincer umatlas       529 Jan 10 19:50 boinc_task_state.xml
[2026-01-10 19:58:49] -rw-------. 1 boincer umatlas  45372136 Jan 10 19:57 HITS.47962010._002857.pool.root.1
[2026-01-10 19:58:49] -rw-------. 1 boincer umatlas      1034 Jan 10 19:57 memory_monitor_summary.json
[2026-01-10 19:58:49] -rw-------. 1 boincer umatlas   1308011 Jan 10 19:57 log.47962010._002857.job.log.tgz.1
[2026-01-10 19:58:49] -rw-------. 1 boincer umatlas      8543 Jan 10 19:57 heartbeat.json
[2026-01-10 19:58:49] -rw-------. 1 boincer umatlas        95 Jan 10 19:58 pilot_heartbeat.json
[2026-01-10 19:58:49] -rw-r--r--. 1 boincer umatlas      6944 Jan 10 19:58 init_data.xml
[2026-01-10 19:58:49] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 19:58 boinc_mmap_file
[2026-01-10 19:58:49] -rw-r--r--. 1 boincer umatlas        27 Jan 10 19:58 wrapper_checkpoint.txt
[2026-01-10 19:58:49] -rw-------. 1 boincer umatlas      4896 Jan 10 19:58 pilotlog.txt
[2026-01-10 19:58:49] -rw-------. 1 boincer umatlas    756500 Jan 10 19:58 log.47962010._002857.job.log.1
[2026-01-10 19:58:49] -rw-------. 1 boincer umatlas       353 Jan 10 19:58 output.list
[2026-01-10 19:58:49] -rw-r--r--. 1 boincer umatlas       620 Jan 10 19:58 runtime_log
[2026-01-10 19:58:49] -rw-------. 1 boincer umatlas   2088960 Jan 10 19:58 result.tar.gz
[2026-01-10 19:58:49] -rw-------. 1 boincer umatlas       652 Jan 10 19:58 RxaLDmJCxy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPfhKDmZcj7fn.diag
[2026-01-10 19:58:49] -rw-r--r--. 1 boincer umatlas      9337 Jan 10 19:58 runtime_log.err
[2026-01-10 19:58:49] -rw-r--r--. 1 boincer umatlas     22023 Jan 10 19:58 stderr.txt
[2026-01-10 19:58:49] HITS file was successfully produced:
[2026-01-10 19:58:49] -rw-------. 1 boincer umatlas 45372136 Jan 10 19:57 shared/HITS.pool.root.1
[2026-01-10 19:58:49]  *** Contents of shared directory: ***
[2026-01-10 19:58:49] total 429928
[2026-01-10 19:58:49] -rw-r--r--. 2 boincer umatlas 392167382 Jan 10 18:30 ATLAS.root_0
[2026-01-10 19:58:49] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:30 start_atlas.sh
[2026-01-10 19:58:49] -rw-r--r--. 2 boincer umatlas    592608 Jan 10 18:30 input.tar.gz
[2026-01-10 19:58:49] -rw-------. 1 boincer umatlas  45372136 Jan 10 19:57 HITS.pool.root.1
[2026-01-10 19:58:49] -rw-------. 1 boincer umatlas   2088960 Jan 10 19:58 result.tar.gz
19:58:51 (1997876): run_atlas exited; CPU time 11171.469912
19:58:51 (1997876): called boinc_finish(0)

</stderr_txt>
]]>

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