Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:06:38 (3091020): wrapper (7.7.26015): starting
06:06:38 (3091020): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 06:06:38] Arguments: --nthreads 4
[2026-01-11 06:06:38] Threads: 4
[2026-01-11 06:06:38] Checking for CVMFS
[2026-01-11 06:06:38] No cvmfs_config command found, will try listing directly
[2026-01-11 06:06:38] CVMFS is ok
[2026-01-11 06:06:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 06:06:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 06:06:38] Further information can be found at the LHC@home message board.
[2026-01-11 06:06:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 06:06:38] Checking for apptainer binary...
[2026-01-11 06:06:38] which: no apptainer in ((null))
[2026-01-11 06:06:38] apptainer is not installed, using version from CVMFS
[2026-01-11 06:06:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 06:06:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2026-01-11 06:06:38] apptainer works
[2026-01-11 06:06:38] Set ATHENA_PROC_NUMBER=4
[2026-01-11 06:06:38] Set ATHENA_CORE_NUMBER=4
[2026-01-11 06:06:38] Starting ATLAS job with PandaID=6965809131
[2026-01-11 06:06:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 07:18:08]  *** The last 200 lines of the pilot log: ***
[2026-01-11 07:18:08] 2026-01-11 06:17:26,361 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6965809131/log.47962010._002929.job.log.tgz.1 /scratch/boinc/var/slot40/slots/0/lo
[2026-01-11 07:18:08] 2026-01-11 06:17:26,378 | INFO     | adding to output.list: log.47962010._002929.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/8d/9d/log.47962010._002929.job.log.tgz.
[2026-01-11 07:18:08] 2026-01-11 06:17:26,379 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 07:18:08] 2026-01-11 06:17:26,379 | INFO     | summary of transferred files:
[2026-01-11 07:18:08] 2026-01-11 06:17:26,379 | INFO     |  -- lfn=log.47962010._002929.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 07:18:08] 2026-01-11 06:17:26,379 | INFO     | stage-out finished correctly
[2026-01-11 07:18:08] 2026-01-11 06:17:26,487 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 07:18:08] 2026-01-11 06:17:26,749 | INFO     | time since job start (4239s) is within the limit (349056.0s)
[2026-01-11 07:18:08] 2026-01-11 06:17:27,033 | INFO     | job 6965809131 has state=finished
[2026-01-11 07:18:08] 2026-01-11 06:17:27,034 | INFO     | preparing for final server update for job 6965809131 in state='finished'
[2026-01-11 07:18:08] 2026-01-11 06:17:27,034 | INFO     | this job has now completed (state=finished)
[2026-01-11 07:18:08] 2026-01-11 06:17:27,035 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 07:18:08] 2026-01-11 06:17:27,035 | INFO     | log transfer has been attempted: DONE
[2026-01-11 07:18:08] 2026-01-11 06:17:27,035 | INFO     | job 6965809131 has finished - writing final server update
[2026-01-11 07:18:08] 2026-01-11 06:17:27,035 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1931052/.job.ad'
[2026-01-11 07:18:08] 2026-01-11 06:17:27,035 | INFO     | total number of processed events: 50 (read)
[2026-01-11 07:18:08] 2026-01-11 06:17:27,036 | INFO     | executing command: lscpu
[2026-01-11 07:18:08] 2026-01-11 06:17:27,079 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 07:18:08] 2026-01-11 06:17:27,544 | WARNING  | process 3112349 can no longer be monitored (due to stat problems) - aborting
[2026-01-11 07:18:08] 2026-01-11 06:17:27,545 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6965809131/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 07:18:08] 2026-01-11 06:17:27,546 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6965809131/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 07:18:08] 2026-01-11 06:17:27,547 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-11 07:18:08] 2026-01-11 06:17:27,547 | WARNING  | maxPSS not found in memory monitor output
[2026-01-11 07:18:08] 2026-01-11 06:17:27,548 | INFO     | payload log (log.HITSMergeAthenaMP0) within allowed size limit (2147483648 B): 151008 B
[2026-01-11 07:18:08] 2026-01-11 06:17:27,548 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2170733 B
[2026-01-11 07:18:08] 2026-01-11 06:17:27,548 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 13155 B
[2026-01-11 07:18:08] 2026-01-11 06:17:27,548 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2026-01-11 07:18:08] 2026-01-11 06:17:28,755 | INFO     | time since job start (4241s) is within the limit (349056.0s)
[2026-01-11 07:18:08] 2026-01-11 06:17:30,760 | INFO     | time since job start (4243s) is within the limit (349056.0s)
[2026-01-11 07:18:08] 2026-01-11 06:17:31,804 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 07:18:08] 2026-01-11 06:17:31,820 | INFO     | sufficient remaining disk space (1677229817856 B)
[2026-01-11 07:18:08] 2026-01-11 06:17:31,821 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-11 07:18:08] 2026-01-11 06:17:31,832 | INFO     | size of work directory /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6965809131: 4232606 B (within 4404019200 B limit)
[2026-01-11 07:18:08] 2026-01-11 06:17:31,832 | INFO     | pfn file=/scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6965809131/HITS.47962010._002929.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-11 07:18:08] 2026-01-11 06:17:31,833 | INFO     | total size of present files: 0 B (workdir size: 4232606 B)
[2026-01-11 07:18:08] 2026-01-11 06:17:31,833 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6965809131/HITS.47962010._002929.pool.root.1 since it does not exist
[2026-01-11 07:18:08] 2026-01-11 06:17:31,841 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2633.264774999999
[2026-01-11 07:18:08] 2026-01-11 06:17:31,854 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6965809131/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 07:18:08] 2026-01-11 06:17:31,856 | INFO     | extracted standard info from prmon json
[2026-01-11 07:18:08] 2026-01-11 06:17:31,856 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 07:18:08] 2026-01-11 06:17:31,856 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 07:18:08] 2026-01-11 06:17:31,859 | INFO     | fitting pss+swap vs Time
[2026-01-11 07:18:08] 2026-01-11 06:17:31,859 | INFO     | sum of square deviations: 77515872.0
[2026-01-11 07:18:08] 2026-01-11 06:17:31,860 | INFO     | sum of deviations: -1744188128.0
[2026-01-11 07:18:08] 2026-01-11 06:17:31,860 | INFO     | mean x: 1768110227.0
[2026-01-11 07:18:08] 2026-01-11 06:17:31,860 | INFO     | mean y: 2145769.476190476
[2026-01-11 07:18:08] 2026-01-11 06:17:31,860 | INFO     | intersect: 39786473641.43491
[2026-01-11 07:18:08] 2026-01-11 06:17:31,861 | INFO     | chi2: 0.18352573050436322
[2026-01-11 07:18:08] 2026-01-11 06:17:31,861 | INFO     | current memory leak: -22.50 B/s (using 63 data points, chi2=0.18)
[2026-01-11 07:18:08] 2026-01-11 06:17:31,861 | INFO     | could have reported an average CPU frequency of 2546 MHz (6 samples)
[2026-01-11 07:18:08] 2026-01-11 06:17:31,862 | INFO     | ..............................
[2026-01-11 07:18:08] 2026-01-11 06:17:31,862 | INFO     | . Timing measurements:
[2026-01-11 07:18:08] 2026-01-11 06:17:31,862 | INFO     | . get job = 0 s
[2026-01-11 07:18:08] 2026-01-11 06:17:31,862 | INFO     | . initial setup = 1 s
[2026-01-11 07:18:08] 2026-01-11 06:17:31,863 | INFO     | . payload setup = 5 s
[2026-01-11 07:18:08] 2026-01-11 06:17:31,863 | INFO     | . stage-in = 0 s
[2026-01-11 07:18:08] 2026-01-11 06:17:31,863 | INFO     | . payload execution = 4215 s
[2026-01-11 07:18:08] 2026-01-11 06:17:31,863 | INFO     | . stage-out = 0 s
[2026-01-11 07:18:08] 2026-01-11 06:17:31,863 | INFO     | . log creation = 0 s
[2026-01-11 07:18:08] 2026-01-11 06:17:31,863 | INFO     | ..............................
[2026-01-11 07:18:08] 2026-01-11 06:17:32,001 | INFO     | 
[2026-01-11 07:18:08] 2026-01-11 06:17:32,002 | INFO     | job summary report
[2026-01-11 07:18:08] 2026-01-11 06:17:32,002 | INFO     | --------------------------------------------------
[2026-01-11 07:18:08] 2026-01-11 06:17:32,002 | INFO     | PanDA job id: 6965809131
[2026-01-11 07:18:08] 2026-01-11 06:17:32,002 | INFO     | task id: 47962010
[2026-01-11 07:18:08] 2026-01-11 06:17:32,002 | INFO     | errors: (none)
[2026-01-11 07:18:08] 2026-01-11 06:17:32,002 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 07:18:08] 2026-01-11 06:17:32,002 | INFO     | pilot state: finished 
[2026-01-11 07:18:08] 2026-01-11 06:17:32,003 | INFO     | transexitcode: 0
[2026-01-11 07:18:08] 2026-01-11 06:17:32,003 | INFO     | exeerrorcode: 0
[2026-01-11 07:18:08] 2026-01-11 06:17:32,003 | INFO     | exeerrordiag: 
[2026-01-11 07:18:08] 2026-01-11 06:17:32,003 | INFO     | exitcode: 0
[2026-01-11 07:18:08] 2026-01-11 06:17:32,003 | INFO     | exitmsg: OK
[2026-01-11 07:18:08] 2026-01-11 06:17:32,003 | INFO     | cpuconsumptiontime: 15098 s
[2026-01-11 07:18:08] 2026-01-11 06:17:32,004 | INFO     | nevents: 50
[2026-01-11 07:18:08] 2026-01-11 06:17:32,004 | INFO     | neventsw: 0
[2026-01-11 07:18:08] 2026-01-11 06:17:32,004 | INFO     | pid: 3112349
[2026-01-11 07:18:08] 2026-01-11 06:17:32,004 | INFO     | pgrp: 3112349
[2026-01-11 07:18:08] 2026-01-11 06:17:32,004 | INFO     | corecount: 4
[2026-01-11 07:18:08] 2026-01-11 06:17:32,004 | INFO     | event service: False
[2026-01-11 07:18:08] 2026-01-11 06:17:32,004 | INFO     | sizes: {0: 2284407, 1: 2284606, 4: 2284868, 11: 2284896, 4224: 2311520, 4225: 2320720, 4231: 2320938}
[2026-01-11 07:18:08] 2026-01-11 06:17:32,005 | INFO     | --------------------------------------------------
[2026-01-11 07:18:08] 2026-01-11 06:17:32,005 | INFO     | 
[2026-01-11 07:18:08] 2026-01-11 06:17:32,005 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2026-01-11 07:18:08] 2026-01-11 06:17:32,025 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 07:18:08] 2026-01-11 06:17:32,026 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 07:18:08] 2026-01-11 06:17:32,026 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 07:18:08] 2026-01-11 06:17:32,026 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 07:18:08] 2026-01-11 06:17:32,026 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 07:18:08] 2026-01-11 06:17:32,026 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 07:18:08] 2026-01-11 06:17:32,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 07:18:08] 2026-01-11 06:17:32,027 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 07:18:08] 2026-01-11 06:17:32,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 07:18:08] 2026-01-11 06:17:32,027 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 07:18:08] 2026-01-11 06:17:32,027 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 07:18:08] 2026-01-11 06:17:32,027 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 07:18:08] 2026-01-11 06:17:32,027 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 07:18:08] 2026-01-11 06:17:32,027 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 07:18:08] 2026-01-11 06:17:32,028 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 07:18:08] 2026-01-11 06:17:32,028 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 07:18:08] 2026-01-11 06:17:32,028 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 07:18:08] 2026-01-11 06:17:32,028 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 07:18:08] 2026-01-11 06:17:32,028 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 07:18:08] 2026-01-11 06:17:32,028 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 07:18:08] 2026-01-11 06:17:32,029 | INFO     | job 6965809131 has completed (purged errors)
[2026-01-11 07:18:08] 2026-01-11 06:17:32,029 | INFO     | overall cleanup function is called
[2026-01-11 07:18:08] 2026-01-11 06:17:32,751 | INFO     | PID=3098243 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-11 07:18:08] 2026-01-11 06:17:32,751 | INFO     | .. there are 2 such processes running
[2026-01-11 07:18:08] 2026-01-11 06:17:32,758 | INFO     | number of running child processes to parent process 3112349: 1
[2026-01-11 07:18:08] 2026-01-11 06:17:32,758 | INFO     | maximum number of monitored processes: 9
[2026-01-11 07:18:08] 2026-01-11 06:17:32,758 | INFO     | aborting job monitoring since job object (job id=6965809131) has expired
[2026-01-11 07:18:08] 2026-01-11 06:17:33,051 | INFO     | --- collectZombieJob: --- 10, [3112349]
[2026-01-11 07:18:08] 2026-01-11 06:17:33,052 | INFO     | zombie collector waiting for pid 3112349
[2026-01-11 07:18:08] 2026-01-11 06:17:33,052 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 07:18:08] 2026-01-11 06:17:33,052 | INFO     | collected zombie processes
[2026-01-11 07:18:08] 2026-01-11 06:17:33,052 | INFO     | will attempt to kill all subprocesses of pid=3112349
[2026-01-11 07:18:08] 2026-01-11 06:17:33,354 | INFO     | process IDs to be killed: [3112349] (in reverse order)
[2026-01-11 07:18:08] 2026-01-11 06:17:33,432 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 07:18:08] 2026-01-11 06:17:33,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 07:18:08] 2026-01-11 06:17:33,440 | INFO     | did not find any defunct processes belonging to 3112349
[2026-01-11 07:18:08] 2026-01-11 06:17:33,448 | INFO     | did not find any defunct processes belonging to 3112349
[2026-01-11 07:18:08] 2026-01-11 06:17:33,448 | INFO     | ready for new job
[2026-01-11 07:18:08] 2026-01-11 06:17:33,448 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 07:18:08] 2026-01-11 06:17:33,450 | INFO     | ***************************************
[2026-01-11 07:18:08] 2026-01-11 06:17:33,450 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 07:18:08] 2026-01-11 06:17:33,450 | INFO     | ***************************************
[2026-01-11 07:18:08] 2026-01-11 06:17:33,451 | INFO     | 
[2026-01-11 07:18:08] 2026-01-11 06:17:33,453 | INFO     | architecture information:
[2026-01-11 07:18:08] 2026-01-11 06:17:33,454 | INFO     | executing command: cat /etc/os-release
[2026-01-11 07:18:08] 2026-01-11 06:17:33,468 | INFO     | cat /etc/os-release:
[2026-01-11 07:18:08] NAME="CentOS Linux"
[2026-01-11 07:18:08] VERSION="7 (Core)"
[2026-01-11 07:18:08] ID="centos"
[2026-01-11 07:18:08] ID_LIKE="rhel fedora"
[2026-01-11 07:18:08] VERSION_ID="7"
[2026-01-11 07:18:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 07:18:08] ANSI_COLOR="0;31"
[2026-01-11 07:18:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 07:18:08] HOME_URL="https://www.centos.org/"
[2026-01-11 07:18:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 07:18:08] 
[2026-01-11 07:18:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 07:18:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 07:18:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 07:18:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 07:18:08] 
[2026-01-11 07:18:08] 2026-01-11 06:17:33,469 | INFO     | ***************************************
[2026-01-11 07:18:08] 2026-01-11 06:17:33,972 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2026-01-11 07:18:08] 2026-01-11 06:17:33,987 | INFO     | sufficient remaining disk space (1677232963584 B)
[2026-01-11 07:18:08] 2026-01-11 06:17:33,988 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 07:18:08] 2026-01-11 06:17:33,988 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 07:18:08] 2026-01-11 06:17:33,988 | INFO     | update_server=False
[2026-01-11 07:18:08] 2026-01-11 06:17:33,988 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 07:18:08] 2026-01-11 06:17:33,989 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:18:08] 2026-01-11 06:17:33,989 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:18:08] 2026-01-11 06:17:33,989 | INFO     | aborting loop
[2026-01-11 07:18:08] 2026-01-11 06:17:34,234 | INFO     | all payload control threads have been joined
[2026-01-11 07:18:08] 2026-01-11 06:17:34,498 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 07:18:08] 2026-01-11 06:17:34,994 | INFO     | [job] retrieve thread has finished
[2026-01-11 07:18:08] 2026-01-11 06:17:34,994 | INFO     | [job] queue monitor thread has finished
[2026-01-11 07:18:08] 2026-01-11 06:17:34,995 | INFO     | [job] job monitor thread has finished
[2026-01-11 07:18:08] 2026-01-11 06:17:35,003 | INFO     | all data control threads have been joined
[2026-01-11 07:18:08] 2026-01-11 06:17:35,010 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 07:18:08] 2026-01-11 06:17:35,128 | INFO     | all job control threads have been joined
[2026-01-11 07:18:08] 2026-01-11 06:17:35,235 | INFO     | [payload] control thread has finished
[2026-01-11 07:18:08] 2026-01-11 06:17:35,648 | INFO     | [payload] failed_post thread has finished
[2026-01-11 07:18:08] 2026-01-11 06:17:35,938 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 07:18:08] 2026-01-11 06:17:35,971 | INFO     | [job] validate thread has finished
[2026-01-11 07:18:08] 2026-01-11 06:17:36,009 | INFO     | [data] control thread has finished
[2026-01-11 07:18:08] 2026-01-11 06:17:36,030 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 07:18:08] 2026-01-11 06:17:36,134 | INFO     | [job] control thread has finished
[2026-01-11 07:18:08] 2026-01-11 06:17:36,230 | INFO     | [payload] validate_post thread has finished
[2026-01-11 07:18:08] 2026-01-11 06:17:36,417 | INFO     | [data] copytool_in thread has finished
[2026-01-11 07:18:08] 2026-01-11 06:17:36,485 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 07:18:08] 2026-01-11 06:17:36,504 | INFO     | [data] copytool_out thread has finished
[2026-01-11 07:18:08] 2026-01-11 06:17:37,089 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 07:18:08] 2026-01-11 06:17:41,095 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 07:18:08] 2026-01-11 06:17:52,777 | INFO     | [monitor] cgroup control has ended
[2026-01-11 07:18:08] 2026-01-11 06:17:52,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23198096836416)>', '<ExcThread(monitor, started 23197508409088)>']
[2026-01-11 07:18:08] 2026-01-11 06:17:57,810 | INFO     | all workflow threads have been joined
[2026-01-11 07:18:08] 2026-01-11 06:17:57,811 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 07:18:08] 2026-01-11 06:17:57,811 | INFO     | traces error code: 0
[2026-01-11 07:18:08] 2026-01-11 06:17:57,811 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 07:18:08] 2026-01-11 06:18:05,226 | INFO     | PID=3098243 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 07:18:08] 2026-01-11 06:18:05,226 | INFO     | .. there are 2 such processes running
[2026-01-11 07:18:08] 2026-01-11 06:18:05,227 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 07:18:08] 2026-01-11 06:18:05,227 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 07:18:08] 2026-01-11 06:18:05,227 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 07:18:08] 2026-01-11 06:18:05,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 07:18:08] 2026-01-11 06:18:05,227 | INFO     | [monitor] control thread has ended
[2026-01-11 07:18:08] 2026-01-11 06:18:05,375 [wrapper] ==== pilot stdout END ====
[2026-01-11 07:18:08] 2026-01-11 06:18:05,378 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 07:18:08] 2026-01-11 06:18:05,380 [wrapper] pilotpid: 3098243
[2026-01-11 07:18:08] 2026-01-11 06:18:05,383 [wrapper] Pilot exit status: 0
[2026-01-11 07:18:08] 2026-01-11 06:18:05,392 [wrapper] pandaids: 6965809131
[2026-01-11 07:18:08] 2026-01-11 06:18:05,443 [wrapper] cleanup supervisor_pilot 3153610 3098244
[2026-01-11 07:18:08] 2026-01-11 06:18:05,446 [wrapper] Test setup, not cleaning
[2026-01-11 07:18:08] 2026-01-11 06:18:05,449 [wrapper] apfmon messages muted
[2026-01-11 07:18:08] 2026-01-11 06:18:05,451 [wrapper] ==== wrapper stdout END ====
[2026-01-11 07:18:08] 2026-01-11 06:18:05,454 [wrapper] ==== wrapper stderr END ====
[2026-01-11 07:18:08]  *** Error codes and diagnostics ***
[2026-01-11 07:18:08]     "exeErrorCode": 0,
[2026-01-11 07:18:08]     "exeErrorDiag": "",
[2026-01-11 07:18:08]     "pilotErrorCode": 0,
[2026-01-11 07:18:08]     "pilotErrorDiag": "",
[2026-01-11 07:18:08]  *** Listing of results directory ***
[2026-01-11 07:18:08] total 434652
[2026-01-11 07:18:08] -rw-r--r-- 1 boinc boinc    579449 Jan 11 00:00 pilot3.tar.gz
[2026-01-11 07:18:08] -rwx------ 1 boinc boinc     36322 Jan 11 00:17 runpilot2-wrapper.sh
[2026-01-11 07:18:08] -rw-r--r-- 1 boinc boinc      5112 Jan 11 00:17 queuedata.json
[2026-01-11 07:18:08] -rw-r--r-- 1 boinc boinc       100 Jan 11 06:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 07:18:08] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 06:06 run_atlas
[2026-01-11 07:18:08] -rw-r--r-- 1 boinc boinc       105 Jan 11 06:06 job.xml
[2026-01-11 07:18:08] -rw-r--r-- 2 boinc boinc 394279427 Jan 11 06:06 EVNT.47962006._000043.pool.root.1
[2026-01-11 07:18:08] -rw-r--r-- 1 boinc boinc      6425 Jan 11 06:06 init_data.xml
[2026-01-11 07:18:08] -rw-r--r-- 2 boinc boinc     15847 Jan 11 06:06 start_atlas.sh
[2026-01-11 07:18:08] drwxrwx--x 2 boinc boinc      4096 Jan 11 06:06 shared
[2026-01-11 07:18:08] -rw-r--r-- 2 boinc boinc    592611 Jan 11 06:06 input.tar.gz
[2026-01-11 07:18:08] -rw-r--r-- 1 boinc boinc         0 Jan 11 06:06 boinc_lockfile
[2026-01-11 07:18:08] -rw-r--r-- 1 boinc boinc      2888 Jan 11 06:06 pandaJob.out
[2026-01-11 07:18:08] -rw------- 1 boinc boinc    989548 Jan 11 06:06 agis_schedconf.cvmfs.json
[2026-01-11 07:18:08] -rw------- 1 boinc boinc   1516240 Jan 11 06:06 agis_ddmendpoints.agis.ALL.json
[2026-01-11 07:18:08] drwx------ 5 boinc boinc      4096 Jan 11 06:06 pilot3
[2026-01-11 07:18:08] -rw-r--r-- 1 boinc boinc       528 Jan 11 07:10 boinc_task_state.xml
[2026-01-11 07:18:08] -rw------- 1 boinc boinc  44080170 Jan 11 07:17 HITS.47962010._002929.pool.root.1
[2026-01-11 07:18:08] -rw------- 1 boinc boinc        95 Jan 11 07:17 pilot_heartbeat.json
[2026-01-11 07:18:08] -rw------- 1 boinc boinc      1033 Jan 11 07:17 memory_monitor_summary.json
[2026-01-11 07:18:08] -rw------- 1 boinc boinc    760700 Jan 11 07:17 log.47962010._002929.job.log.tgz.1
[2026-01-11 07:18:08] -rw------- 1 boinc boinc      8590 Jan 11 07:17 heartbeat.json
[2026-01-11 07:18:08] -rw------- 1 boinc boinc       822 Jan 11 07:18 pilotlog.txt
[2026-01-11 07:18:08] -rw------- 1 boinc boinc    648009 Jan 11 07:18 log.47962010._002929.job.log.1
[2026-01-11 07:18:08] -rw------- 1 boinc boinc       353 Jan 11 07:18 output.list
[2026-01-11 07:18:08] -rw-r--r-- 1 boinc boinc       620 Jan 11 07:18 runtime_log
[2026-01-11 07:18:08] -rw------- 1 boinc boinc   1423360 Jan 11 07:18 result.tar.gz
[2026-01-11 07:18:08] -rw-r--r-- 1 boinc boinc      9205 Jan 11 07:18 runtime_log.err
[2026-01-11 07:18:08] -rw------- 1 boinc boinc       661 Jan 11 07:18 7kzMDm1Nxy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2xmKDmgNmSEo.diag
[2026-01-11 07:18:08] -rw-r--r-- 1 boinc boinc        26 Jan 11 07:18 wrapper_checkpoint.txt
[2026-01-11 07:18:08] -rw-r--r-- 1 boinc boinc      8192 Jan 11 07:18 boinc_mmap_file
[2026-01-11 07:18:08] -rw-r--r-- 1 boinc boinc     22752 Jan 11 07:18 stderr.txt
[2026-01-11 07:18:08] HITS file was successfully produced:
[2026-01-11 07:18:08] -rw------- 1 boinc boinc 44080170 Jan 11 07:17 shared/HITS.pool.root.1
[2026-01-11 07:18:08]  *** Contents of shared directory: ***
[2026-01-11 07:18:08] total 430080
[2026-01-11 07:18:08] -rw-r--r-- 2 boinc boinc 394279427 Jan 11 06:06 ATLAS.root_0
[2026-01-11 07:18:08] -rw-r--r-- 2 boinc boinc     15847 Jan 11 06:06 start_atlas.sh
[2026-01-11 07:18:08] -rw-r--r-- 2 boinc boinc    592611 Jan 11 06:06 input.tar.gz
[2026-01-11 07:18:08] -rw------- 1 boinc boinc  44080170 Jan 11 07:17 HITS.pool.root.1
[2026-01-11 07:18:08] -rw------- 1 boinc boinc   1423360 Jan 11 07:18 result.tar.gz
07:18:10 (3091020): run_atlas exited; CPU time 15212.708498
07:18:10 (3091020): called boinc_finish(0)

</stderr_txt>
]]>

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