Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:35:29 (2927956): wrapper (7.7.26015): starting
02:35:29 (2927956): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 02:35:29] Arguments: --nthreads 4
[2026-01-11 02:35:29] Threads: 4
[2026-01-11 02:35:29] Checking for CVMFS
[2026-01-11 02:35:29] No cvmfs_config command found, will try listing directly
[2026-01-11 02:35:29] CVMFS is ok
[2026-01-11 02:35:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 02:35:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 02:35:29] Further information can be found at the LHC@home message board.
[2026-01-11 02:35:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 02:35:29] Checking for apptainer binary...
[2026-01-11 02:35:29] which: no apptainer in ((null))
[2026-01-11 02:35:29] apptainer is not installed, using version from CVMFS
[2026-01-11 02:35:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 02:35:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2026-01-11 02:35:29] apptainer works
[2026-01-11 02:35:29] Set ATHENA_PROC_NUMBER=4
[2026-01-11 02:35:29] Set ATHENA_CORE_NUMBER=4
[2026-01-11 02:35:29] Starting ATLAS job with PandaID=6965809132
[2026-01-11 02:35:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 04:19:41]  *** The last 200 lines of the pilot log: ***
[2026-01-11 04:19:41]  lfn=log.47962010._002930.job.log.tgz.1
[2026-01-11 04:19:41]  mtime=0
[2026-01-11 04:19:41]  protocol_id=None
[2026-01-11 04:19:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 04:19:41]  replicas=None
[2026-01-11 04:19:41]  scope=mc16_13TeV
[2026-01-11 04:19:41]  status=None
[2026-01-11 04:19:41]  status_code=0
[2026-01-11 04:19:41]  storage_token=
[2026-01-11 04:19:41]  surl=/scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6965809132/log.47962010._002930.job.log.tgz.1
[2026-01-11 04:19:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/8f/49/log.47962010._002930.job.log.tgz.1
[2026-01-11 04:19:41]  workdir=None
[2026-01-11 04:19:41] ]
[2026-01-11 04:19:41] 2026-01-11 03:09:30,485 | INFO     | transferring file log.47962010._002930.job.log.tgz.1 from /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6965809132/log.47962010._002930.job.log.tgz.1 to /scratch/b
[2026-01-11 04:19:41] 2026-01-11 03:09:30,485 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6965809132/log.47962010._002930.job.log.tgz.1 /scratch/boinc/var/slot40/slots/0/lo
[2026-01-11 04:19:41] 2026-01-11 03:09:30,505 | INFO     | adding to output.list: log.47962010._002930.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/8f/49/log.47962010._002930.job.log.tgz.
[2026-01-11 04:19:41] 2026-01-11 03:09:30,506 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 04:19:41] 2026-01-11 03:09:30,507 | INFO     | summary of transferred files:
[2026-01-11 04:19:41] 2026-01-11 03:09:30,507 | INFO     |  -- lfn=log.47962010._002930.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 04:19:41] 2026-01-11 03:09:30,507 | INFO     | stage-out finished correctly
[2026-01-11 04:19:41] 2026-01-11 03:09:30,533 | INFO     | monitor loop #415: job 0:6965809132 is in state 'finished'
[2026-01-11 04:19:41] 2026-01-11 03:09:30,549 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:19:41] 2026-01-11 03:09:30,680 | INFO     | PID=2931628 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-11 04:19:41] 2026-01-11 03:09:30,680 | INFO     | .. there are 3 such processes running
[2026-01-11 04:19:41] 2026-01-11 03:09:30,947 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 04:19:41] 2026-01-11 03:09:31,062 | INFO     | job 6965809132 has state=finished
[2026-01-11 04:19:41] 2026-01-11 03:09:31,062 | INFO     | preparing for final server update for job 6965809132 in state='finished'
[2026-01-11 04:19:41] 2026-01-11 03:09:31,063 | INFO     | this job has now completed (state=finished)
[2026-01-11 04:19:41] 2026-01-11 03:09:31,063 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 04:19:41] 2026-01-11 03:09:31,063 | INFO     | log transfer has been attempted: DONE
[2026-01-11 04:19:41] 2026-01-11 03:09:31,063 | INFO     | job 6965809132 has finished - writing final server update
[2026-01-11 04:19:41] 2026-01-11 03:09:31,063 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1931052/.job.ad'
[2026-01-11 04:19:41] 2026-01-11 03:09:31,064 | INFO     | total number of processed events: 50 (read)
[2026-01-11 04:19:41] 2026-01-11 03:09:31,065 | INFO     | executing command: lscpu
[2026-01-11 04:19:41] 2026-01-11 03:09:31,110 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 04:19:41] 2026-01-11 03:09:31,681 | INFO     | time since job start (5632s) is within the limit (349056.0s)
[2026-01-11 04:19:41] 2026-01-11 03:09:33,062 | INFO     | monitor loop #416: job 0:6965809132 is in state 'finished'
[2026-01-11 04:19:41] 2026-01-11 03:09:33,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:19:41] 2026-01-11 03:09:33,687 | INFO     | time since job start (5634s) is within the limit (349056.0s)
[2026-01-11 04:19:41] 2026-01-11 03:09:35,150 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 04:19:41] 2026-01-11 03:09:35,159 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2606.130825
[2026-01-11 04:19:41] 2026-01-11 03:09:35,167 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6965809132/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 04:19:41] 2026-01-11 03:09:35,168 | INFO     | extracted standard info from prmon json
[2026-01-11 04:19:41] 2026-01-11 03:09:35,168 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 04:19:41] 2026-01-11 03:09:35,169 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 04:19:41] 2026-01-11 03:09:35,172 | INFO     | fitting pss+swap vs Time
[2026-01-11 04:19:41] 2026-01-11 03:09:35,172 | INFO     | sum of square deviations: 190403570.0
[2026-01-11 04:19:41] 2026-01-11 03:09:35,172 | INFO     | sum of deviations: -9638589321.000002
[2026-01-11 04:19:41] 2026-01-11 03:09:35,173 | INFO     | mean x: 1768098235.0
[2026-01-11 04:19:41] 2026-01-11 03:09:35,173 | INFO     | mean y: 2217224.5411764705
[2026-01-11 04:19:41] 2026-01-11 03:09:35,173 | INFO     | intersect: 89506698502.64932
[2026-01-11 04:19:41] 2026-01-11 03:09:35,173 | INFO     | chi2: 0.13990661128522192
[2026-01-11 04:19:41] 2026-01-11 03:09:35,173 | INFO     | current memory leak: -50.62 B/s (using 85 data points, chi2=0.14)
[2026-01-11 04:19:41] 2026-01-11 03:09:35,174 | INFO     | could have reported an average CPU frequency of 2462 MHz (7 samples)
[2026-01-11 04:19:41] 2026-01-11 03:09:35,174 | INFO     | ..............................
[2026-01-11 04:19:41] 2026-01-11 03:09:35,174 | INFO     | . Timing measurements:
[2026-01-11 04:19:41] 2026-01-11 03:09:35,174 | INFO     | . get job = 0 s
[2026-01-11 04:19:41] 2026-01-11 03:09:35,175 | INFO     | . initial setup = 1 s
[2026-01-11 04:19:41] 2026-01-11 03:09:35,175 | INFO     | . payload setup = 8 s
[2026-01-11 04:19:41] 2026-01-11 03:09:35,175 | INFO     | . stage-in = 0 s
[2026-01-11 04:19:41] 2026-01-11 03:09:35,175 | INFO     | . payload execution = 5601 s
[2026-01-11 04:19:41] 2026-01-11 03:09:35,175 | INFO     | . stage-out = 1 s
[2026-01-11 04:19:41] 2026-01-11 03:09:35,175 | INFO     | . log creation = 0 s
[2026-01-11 04:19:41] 2026-01-11 03:09:35,175 | INFO     | ..............................
[2026-01-11 04:19:41] 2026-01-11 03:09:35,287 | INFO     | 
[2026-01-11 04:19:41] 2026-01-11 03:09:35,288 | INFO     | job summary report
[2026-01-11 04:19:41] 2026-01-11 03:09:35,288 | INFO     | --------------------------------------------------
[2026-01-11 04:19:41] 2026-01-11 03:09:35,289 | INFO     | PanDA job id: 6965809132
[2026-01-11 04:19:41] 2026-01-11 03:09:35,289 | INFO     | task id: 47962010
[2026-01-11 04:19:41] 2026-01-11 03:09:35,289 | INFO     | errors: (none)
[2026-01-11 04:19:41] 2026-01-11 03:09:35,289 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 04:19:41] 2026-01-11 03:09:35,289 | INFO     | pilot state: finished 
[2026-01-11 04:19:41] 2026-01-11 03:09:35,289 | INFO     | transexitcode: 0
[2026-01-11 04:19:41] 2026-01-11 03:09:35,289 | INFO     | exeerrorcode: 0
[2026-01-11 04:19:41] 2026-01-11 03:09:35,289 | INFO     | exeerrordiag: 
[2026-01-11 04:19:41] 2026-01-11 03:09:35,290 | INFO     | exitcode: 0
[2026-01-11 04:19:41] 2026-01-11 03:09:35,290 | INFO     | exitmsg: OK
[2026-01-11 04:19:41] 2026-01-11 03:09:35,290 | INFO     | cpuconsumptiontime: 20354 s
[2026-01-11 04:19:41] 2026-01-11 03:09:35,290 | INFO     | nevents: 50
[2026-01-11 04:19:41] 2026-01-11 03:09:35,290 | INFO     | neventsw: 0
[2026-01-11 04:19:41] 2026-01-11 03:09:35,290 | INFO     | pid: 2938858
[2026-01-11 04:19:41] 2026-01-11 03:09:35,290 | INFO     | pgrp: 2938858
[2026-01-11 04:19:41] 2026-01-11 03:09:35,290 | INFO     | corecount: 4
[2026-01-11 04:19:41] 2026-01-11 03:09:35,291 | INFO     | event service: False
[2026-01-11 04:19:41] 2026-01-11 03:09:35,291 | INFO     | sizes: {0: 2284407, 1: 2284606, 5: 2284868, 11: 2284924, 5613: 2312240, 5616: 2321440, 5620: 2321630}
[2026-01-11 04:19:41] 2026-01-11 03:09:35,291 | INFO     | --------------------------------------------------
[2026-01-11 04:19:41] 2026-01-11 03:09:35,291 | INFO     | 
[2026-01-11 04:19:41] 2026-01-11 03:09:35,291 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2026-01-11 04:19:41] 2026-01-11 03:09:35,311 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 04:19:41] 2026-01-11 03:09:35,311 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 04:19:41] 2026-01-11 03:09:35,311 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 04:19:41] 2026-01-11 03:09:35,311 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 04:19:41] 2026-01-11 03:09:35,312 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 04:19:41] 2026-01-11 03:09:35,312 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 04:19:41] 2026-01-11 03:09:35,312 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 04:19:41] 2026-01-11 03:09:35,312 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 04:19:41] 2026-01-11 03:09:35,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 04:19:41] 2026-01-11 03:09:35,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 04:19:41] 2026-01-11 03:09:35,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 04:19:41] 2026-01-11 03:09:35,313 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 04:19:41] 2026-01-11 03:09:35,313 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 04:19:41] 2026-01-11 03:09:35,313 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 04:19:41] 2026-01-11 03:09:35,313 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 04:19:41] 2026-01-11 03:09:35,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 04:19:41] 2026-01-11 03:09:35,313 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 04:19:41] 2026-01-11 03:09:35,313 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 04:19:41] 2026-01-11 03:09:35,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 04:19:41] 2026-01-11 03:09:35,314 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 04:19:41] 2026-01-11 03:09:35,314 | INFO     | job 6965809132 has completed (purged errors)
[2026-01-11 04:19:41] 2026-01-11 03:09:35,314 | INFO     | overall cleanup function is called
[2026-01-11 04:19:41] 2026-01-11 03:09:36,327 | INFO     | --- collectZombieJob: --- 10, [2938858]
[2026-01-11 04:19:41] 2026-01-11 03:09:36,327 | INFO     | zombie collector waiting for pid 2938858
[2026-01-11 04:19:41] 2026-01-11 03:09:36,328 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 04:19:41] 2026-01-11 03:09:36,328 | INFO     | collected zombie processes
[2026-01-11 04:19:41] 2026-01-11 03:09:36,328 | INFO     | will attempt to kill all subprocesses of pid=2938858
[2026-01-11 04:19:41] 2026-01-11 03:09:36,691 | INFO     | process IDs to be killed: [2938858] (in reverse order)
[2026-01-11 04:19:41] 2026-01-11 03:09:36,775 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 04:19:41] 2026-01-11 03:09:36,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 04:19:41] 2026-01-11 03:09:36,786 | INFO     | did not find any defunct processes belonging to 2938858
[2026-01-11 04:19:41] 2026-01-11 03:09:36,796 | INFO     | did not find any defunct processes belonging to 2938858
[2026-01-11 04:19:41] 2026-01-11 03:09:36,796 | INFO     | ready for new job
[2026-01-11 04:19:41] 2026-01-11 03:09:36,796 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 04:19:41] 2026-01-11 03:09:36,798 | INFO     | ***************************************
[2026-01-11 04:19:41] 2026-01-11 03:09:36,799 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 04:19:41] 2026-01-11 03:09:36,799 | INFO     | ***************************************
[2026-01-11 04:19:41] 2026-01-11 03:09:36,799 | INFO     | 
[2026-01-11 04:19:41] 2026-01-11 03:09:36,801 | INFO     | architecture information:
[2026-01-11 04:19:41] 2026-01-11 03:09:36,802 | INFO     | executing command: cat /etc/os-release
[2026-01-11 04:19:41] 2026-01-11 03:09:36,818 | INFO     | cat /etc/os-release:
[2026-01-11 04:19:41] NAME="CentOS Linux"
[2026-01-11 04:19:41] VERSION="7 (Core)"
[2026-01-11 04:19:41] ID="centos"
[2026-01-11 04:19:41] ID_LIKE="rhel fedora"
[2026-01-11 04:19:41] VERSION_ID="7"
[2026-01-11 04:19:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 04:19:41] ANSI_COLOR="0;31"
[2026-01-11 04:19:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 04:19:41] HOME_URL="https://www.centos.org/"
[2026-01-11 04:19:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 04:19:41] 
[2026-01-11 04:19:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 04:19:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 04:19:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 04:19:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 04:19:41] 
[2026-01-11 04:19:41] 2026-01-11 03:09:36,818 | INFO     | ***************************************
[2026-01-11 04:19:41] 2026-01-11 03:09:37,321 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2026-01-11 04:19:41] 2026-01-11 03:09:37,338 | INFO     | sufficient remaining disk space (1678197653504 B)
[2026-01-11 04:19:41] 2026-01-11 03:09:37,338 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 04:19:41] 2026-01-11 03:09:37,338 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 04:19:41] 2026-01-11 03:09:37,339 | INFO     | update_server=False
[2026-01-11 04:19:41] 2026-01-11 03:09:37,339 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 04:19:41] 2026-01-11 03:09:37,339 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:19:41] 2026-01-11 03:09:37,339 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 04:19:41] 2026-01-11 03:09:37,340 | INFO     | aborting loop
[2026-01-11 04:19:41] 2026-01-11 03:09:37,465 | INFO     | all data control threads have been joined
[2026-01-11 04:19:41] 2026-01-11 03:09:38,344 | INFO     | [job] retrieve thread has finished
[2026-01-11 04:19:41] 2026-01-11 03:09:38,345 | INFO     | [job] job monitor thread has finished
[2026-01-11 04:19:41] 2026-01-11 03:09:38,347 | INFO     | all payload control threads have been joined
[2026-01-11 04:19:41] 2026-01-11 03:09:38,469 | INFO     | [data] control thread has finished
[2026-01-11 04:19:41] 2026-01-11 03:09:38,507 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 04:19:41] 2026-01-11 03:09:38,587 | INFO     | [payload] failed_post thread has finished
[2026-01-11 04:19:41] 2026-01-11 03:09:38,621 | INFO     | [job] validate thread has finished
[2026-01-11 04:19:41] 2026-01-11 03:09:38,636 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 04:19:41] 2026-01-11 03:09:38,668 | INFO     | all job control threads have been joined
[2026-01-11 04:19:41] 2026-01-11 03:09:38,923 | INFO     | [data] copytool_in thread has finished
[2026-01-11 04:19:41] 2026-01-11 03:09:38,971 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 04:19:41] 2026-01-11 03:09:39,224 | INFO     | [payload] validate_post thread has finished
[2026-01-11 04:19:41] 2026-01-11 03:09:39,244 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 04:19:41] 2026-01-11 03:09:39,352 | INFO     | [payload] control thread has finished
[2026-01-11 04:19:41] 2026-01-11 03:09:39,673 | INFO     | [job] control thread has finished
[2026-01-11 04:19:41] 2026-01-11 03:09:40,296 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:19:41] 2026-01-11 03:09:40,641 | INFO     | [data] copytool_out thread has finished
[2026-01-11 04:19:41] 2026-01-11 03:09:41,302 | INFO     | [job] queue monitor thread has finished
[2026-01-11 04:19:41] 2026-01-11 03:09:41,344 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 04:19:41] 2026-01-11 03:09:47,663 | INFO     | job.realtimelogging is not enabled
[2026-01-11 04:19:41] 2026-01-11 03:09:48,318 | INFO     | [monitor] cgroup control has ended
[2026-01-11 04:19:41] 2026-01-11 03:09:48,669 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 04:19:41] 2026-01-11 03:09:49,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22717328529216)>', '<ExcThread(monitor, started 22716753114880)>']
[2026-01-11 04:19:41] 2026-01-11 03:09:54,697 | INFO     | all workflow threads have been joined
[2026-01-11 04:19:41] 2026-01-11 03:09:54,697 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 04:19:41] 2026-01-11 03:09:54,698 | INFO     | traces error code: 0
[2026-01-11 04:19:41] 2026-01-11 03:09:54,698 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 04:19:41] 2026-01-11 03:10:07,217 | INFO     | PID=2931628 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 04:19:41] 2026-01-11 03:10:07,217 | INFO     | .. there are 3 such processes running
[2026-01-11 04:19:41] 2026-01-11 03:10:07,218 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 04:19:41] 2026-01-11 03:10:07,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 04:19:41] 2026-01-11 03:10:07,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 04:19:41] 2026-01-11 03:10:07,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 04:19:41] 2026-01-11 03:10:07,219 | INFO     | [monitor] control thread has ended
[2026-01-11 04:19:41] 2026-01-11 03:10:07,344 [wrapper] ==== pilot stdout END ====
[2026-01-11 04:19:41] 2026-01-11 03:10:07,347 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 04:19:41] 2026-01-11 03:10:07,349 [wrapper] pilotpid: 2931628
[2026-01-11 04:19:41] 2026-01-11 03:10:07,352 [wrapper] Pilot exit status: 0
[2026-01-11 04:19:41] 2026-01-11 03:10:07,362 [wrapper] pandaids: 6965809132
[2026-01-11 04:19:41] 2026-01-11 03:10:07,422 [wrapper] cleanup supervisor_pilot 2995710 2931629
[2026-01-11 04:19:41] 2026-01-11 03:10:07,425 [wrapper] Test setup, not cleaning
[2026-01-11 04:19:41] 2026-01-11 03:10:07,427 [wrapper] apfmon messages muted
[2026-01-11 04:19:41] 2026-01-11 03:10:07,430 [wrapper] ==== wrapper stdout END ====
[2026-01-11 04:19:41] 2026-01-11 03:10:07,432 [wrapper] ==== wrapper stderr END ====
[2026-01-11 04:19:41]  *** Error codes and diagnostics ***
[2026-01-11 04:19:41]     "exeErrorCode": 0,
[2026-01-11 04:19:41]     "exeErrorDiag": "",
[2026-01-11 04:19:41]     "pilotErrorCode": 0,
[2026-01-11 04:19:41]     "pilotErrorDiag": "",
[2026-01-11 04:19:41]  *** Listing of results directory ***
[2026-01-11 04:19:41] total 436300
[2026-01-11 04:19:41] -rw-r--r-- 1 boinc boinc    579449 Jan 11 00:00 pilot3.tar.gz
[2026-01-11 04:19:41] -rwx------ 1 boinc boinc     36322 Jan 11 00:17 runpilot2-wrapper.sh
[2026-01-11 04:19:41] -rw-r--r-- 1 boinc boinc      5112 Jan 11 00:17 queuedata.json
[2026-01-11 04:19:41] -rw-r--r-- 1 boinc boinc       100 Jan 11 00:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 04:19:41] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 00:59 run_atlas
[2026-01-11 04:19:41] -rw-r--r-- 1 boinc boinc       105 Jan 11 00:59 job.xml
[2026-01-11 04:19:41] -rw-r--r-- 2 boinc boinc 394279427 Jan 11 02:35 EVNT.47962006._000043.pool.root.1
[2026-01-11 04:19:41] -rw-r--r-- 1 boinc boinc      6425 Jan 11 02:35 init_data.xml
[2026-01-11 04:19:41] -rw-r--r-- 2 boinc boinc    592610 Jan 11 02:35 input.tar.gz
[2026-01-11 04:19:41] -rw-r--r-- 2 boinc boinc     15847 Jan 11 02:35 start_atlas.sh
[2026-01-11 04:19:41] drwxrwx--x 2 boinc boinc      4096 Jan 11 02:35 shared
[2026-01-11 04:19:41] -rw-r--r-- 1 boinc boinc         0 Jan 11 02:35 boinc_lockfile
[2026-01-11 04:19:41] -rw-r--r-- 1 boinc boinc      2888 Jan 11 02:35 pandaJob.out
[2026-01-11 04:19:41] -rw------- 1 boinc boinc    989545 Jan 11 02:35 agis_schedconf.cvmfs.json
[2026-01-11 04:19:41] -rw------- 1 boinc boinc   1516240 Jan 11 02:35 agis_ddmendpoints.agis.ALL.json
[2026-01-11 04:19:41] drwx------ 5 boinc boinc      4096 Jan 11 02:35 pilot3
[2026-01-11 04:19:41] -rw-r--r-- 1 boinc boinc       528 Jan 11 03:59 boinc_task_state.xml
[2026-01-11 04:19:41] -rw------- 1 boinc boinc  45342145 Jan 11 04:09 HITS.47962010._002930.pool.root.1
[2026-01-11 04:19:41] -rw------- 1 boinc boinc      1030 Jan 11 04:09 memory_monitor_summary.json
[2026-01-11 04:19:41] -rw------- 1 boinc boinc    781904 Jan 11 04:09 log.47962010._002930.job.log.tgz.1
[2026-01-11 04:19:41] -rw------- 1 boinc boinc      8578 Jan 11 04:09 heartbeat.json
[2026-01-11 04:19:41] -rw------- 1 boinc boinc        95 Jan 11 04:10 pilot_heartbeat.json
[2026-01-11 04:19:41] -rw------- 1 boinc boinc       822 Jan 11 04:10 pilotlog.txt
[2026-01-11 04:19:41] -rw------- 1 boinc boinc    841202 Jan 11 04:10 log.47962010._002930.job.log.1
[2026-01-11 04:19:41] -rw------- 1 boinc boinc       353 Jan 11 04:10 output.list
[2026-01-11 04:19:41] -rw-r--r-- 1 boinc boinc       620 Jan 11 04:10 runtime_log
[2026-01-11 04:19:41] -rw------- 1 boinc boinc   1638400 Jan 11 04:10 result.tar.gz
[2026-01-11 04:19:41] -rw-r--r-- 1 boinc boinc      9205 Jan 11 04:10 runtime_log.err
[2026-01-11 04:19:41] -rw------- 1 boinc boinc       662 Jan 11 04:10 F80MDm1Nxy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3xmKDmVx9udn.diag
[2026-01-11 04:19:41] -rw-r--r-- 1 boinc boinc        26 Jan 11 04:19 wrapper_checkpoint.txt
[2026-01-11 04:19:41] -rw-r--r-- 1 boinc boinc      8192 Jan 11 04:19 boinc_mmap_file
[2026-01-11 04:19:41] -rw-r--r-- 1 boinc boinc     21628 Jan 11 04:19 stderr.txt
[2026-01-11 04:19:41] HITS file was successfully produced:
[2026-01-11 04:19:41] -rw------- 1 boinc boinc 45342145 Jan 11 04:09 shared/HITS.pool.root.1
[2026-01-11 04:19:41]  *** Contents of shared directory: ***
[2026-01-11 04:19:41] total 431520
[2026-01-11 04:19:41] -rw-r--r-- 2 boinc boinc 394279427 Jan 11 02:35 ATLAS.root_0
[2026-01-11 04:19:41] -rw-r--r-- 2 boinc boinc    592610 Jan 11 02:35 input.tar.gz
[2026-01-11 04:19:41] -rw-r--r-- 2 boinc boinc     15847 Jan 11 02:35 start_atlas.sh
[2026-01-11 04:19:41] -rw------- 1 boinc boinc  45342145 Jan 11 04:09 HITS.pool.root.1
[2026-01-11 04:19:41] -rw------- 1 boinc boinc   1638400 Jan 11 04:10 result.tar.gz
04:19:43 (2927956): run_atlas exited; CPU time 20523.833227
04:19:43 (2927956): called boinc_finish(0)

</stderr_txt>
]]>

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