Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:31:27 (1049695): wrapper (7.7.26015): starting
18:31:27 (1049695): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 18:31:27] Arguments: --nthreads 8
[2026-01-10 18:31:27] Threads: 8
[2026-01-10 18:31:27] Checking for CVMFS
[2026-01-10 18:31:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:31:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:31:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:31:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:31:29] 2.13.3.0 8993 16296 112572 154997 2 84 27461697 40960001 27073 16776704 0 54527941 99.877 27864702 45439 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 18:31:29] CVMFS is ok
[2026-01-10 18:31:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:31:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:31:29] Further information can be found at the LHC@home message board.
[2026-01-10 18:31:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:31:29] Checking for apptainer binary...
[2026-01-10 18:31:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:31:29] Running /usr/bin/apptainer --version
[2026-01-10 18:31:30] apptainer version 1.4.5-2.el9
[2026-01-10 18:31:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:31:30] c-208-40.aglt2.org
[2026-01-10 18:31:30] apptainer works
[2026-01-10 18:31:31] Set ATHENA_PROC_NUMBER=8
[2026-01-10 18:31:31] Set ATHENA_CORE_NUMBER=8
[2026-01-10 18:31:31] Starting ATLAS job with PandaID=6965803443
[2026-01-10 18:31:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:19:31]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:19:31]  protocol_id=None
[2026-01-10 19:19:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 19:19:31]  replicas=None
[2026-01-10 19:19:31]  scope=mc16_13TeV
[2026-01-10 19:19:31]  status=None
[2026-01-10 19:19:31]  status_code=0
[2026-01-10 19:19:31]  storage_token=
[2026-01-10 19:19:31]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6965803443/log.47962010._002895.job.log.tgz.1
[2026-01-10 19:19:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/51/bb/log.47962010._002895.job.log.tgz.1
[2026-01-10 19:19:31]  workdir=None
[2026-01-10 19:19:31] ]
[2026-01-10 19:19:31] 2026-01-11 00:18:50,995 | INFO     | transferring file log.47962010._002895.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6965803443/log.47962010._002895.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 19:19:31] 2026-01-11 00:18:50,995 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6965803443/log.47962010._002895.job.log.tgz.1 /tmp/boinchome/slots/3/log.47962010._002895.job
[2026-01-10 19:19:31] 2026-01-11 00:18:51,013 | INFO     | adding to output.list: log.47962010._002895.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/51/bb/log.47962010._002895.job.log.tgz.
[2026-01-10 19:19:31] 2026-01-11 00:18:51,014 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 19:19:31] 2026-01-11 00:18:51,014 | INFO     | summary of transferred files:
[2026-01-10 19:19:31] 2026-01-11 00:18:51,014 | INFO     |  -- lfn=log.47962010._002895.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 19:19:31] 2026-01-11 00:18:51,014 | INFO     | stage-out finished correctly
[2026-01-10 19:19:31] 2026-01-11 00:18:51,064 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 19:19:31] 2026-01-11 00:18:51,217 | INFO     | time since job start (2750s) is within the limit (349056.0s)
[2026-01-10 19:19:31] 2026-01-11 00:18:52,241 | INFO     | monitor loop #210: job 0:6965803443 is in state 'finished'
[2026-01-10 19:19:31] 2026-01-11 00:18:52,241 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:19:31] 2026-01-11 00:18:52,992 | INFO     | job 6965803443 has state=finished
[2026-01-10 19:19:31] 2026-01-11 00:18:52,992 | INFO     | preparing for final server update for job 6965803443 in state='finished'
[2026-01-10 19:19:31] 2026-01-11 00:18:52,993 | INFO     | this job has now completed (state=finished)
[2026-01-10 19:19:31] 2026-01-11 00:18:52,993 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 19:19:31] 2026-01-11 00:18:52,993 | INFO     | log transfer has been attempted: DONE
[2026-01-10 19:19:31] 2026-01-11 00:18:52,993 | INFO     | job 6965803443 has finished - writing final server update
[2026-01-10 19:19:31] 2026-01-11 00:18:52,993 | INFO     | total number of processed events: 50 (read)
[2026-01-10 19:19:31] 2026-01-11 00:18:52,997 | INFO     | executing command: lscpu
[2026-01-10 19:19:31] 2026-01-11 00:18:53,067 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 19:19:31] 2026-01-11 00:18:53,221 | INFO     | time since job start (2752s) is within the limit (349056.0s)
[2026-01-10 19:19:31] 2026-01-11 00:18:54,745 | INFO     | monitor loop #211: job 0:6965803443 is in state 'finished'
[2026-01-10 19:19:31] 2026-01-11 00:18:54,745 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:19:31] 2026-01-11 00:18:55,226 | INFO     | time since job start (2754s) is within the limit (349056.0s)
[2026-01-10 19:19:31] 2026-01-11 00:18:57,232 | INFO     | time since job start (2756s) is within the limit (349056.0s)
[2026-01-10 19:19:31] 2026-01-11 00:18:57,246 | INFO     | monitor loop #212: job 0:6965803443 is in state 'finished'
[2026-01-10 19:19:31] 2026-01-11 00:18:57,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:19:31] 2026-01-11 00:18:58,327 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 19:19:31] 2026-01-11 00:18:58,332 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.1787734374993
[2026-01-10 19:19:31] 2026-01-11 00:18:58,343 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965803443/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:19:31] 2026-01-11 00:18:58,344 | INFO     | extracted standard info from prmon json
[2026-01-10 19:19:31] 2026-01-11 00:18:58,344 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:19:31] 2026-01-11 00:18:58,344 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:19:31] 2026-01-11 00:18:58,345 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:19:31] 2026-01-11 00:18:58,345 | INFO     | sum of square deviations: 14473122.972222218
[2026-01-10 19:19:31] 2026-01-11 00:18:58,345 | INFO     | sum of deviations: 20783955918.472225
[2026-01-10 19:19:31] 2026-01-11 00:18:58,345 | INFO     | mean x: 1768089514.0277777
[2026-01-10 19:19:31] 2026-01-11 00:18:58,345 | INFO     | mean y: 1761901.5277777778
[2026-01-10 19:19:31] 2026-01-11 00:18:58,345 | INFO     | intersect: -2539042132771.0537
[2026-01-10 19:19:31] 2026-01-11 00:18:58,345 | INFO     | chi2: 3.5090261877421463
[2026-01-10 19:19:31] 2026-01-11 00:18:58,345 | INFO     | current memory leak: 1436.04 B/s (using 36 data points, chi2=3.51)
[2026-01-10 19:19:31] 2026-01-11 00:18:58,345 | INFO     | could have reported an average CPU frequency of 3800 MHz (5 samples)
[2026-01-10 19:19:31] 2026-01-11 00:18:58,346 | INFO     | ..............................
[2026-01-10 19:19:31] 2026-01-11 00:18:58,346 | INFO     | . Timing measurements:
[2026-01-10 19:19:31] 2026-01-11 00:18:58,346 | INFO     | . get job = 0 s
[2026-01-10 19:19:31] 2026-01-11 00:18:58,346 | INFO     | . initial setup = 8 s
[2026-01-10 19:19:31] 2026-01-11 00:18:58,346 | INFO     | . payload setup = 53 s
[2026-01-10 19:19:31] 2026-01-11 00:18:58,346 | INFO     | . stage-in = 0 s
[2026-01-10 19:19:31] 2026-01-11 00:18:58,346 | INFO     | . payload execution = 2616 s
[2026-01-10 19:19:31] 2026-01-11 00:18:58,346 | INFO     | . stage-out = 0 s
[2026-01-10 19:19:31] 2026-01-11 00:18:58,346 | INFO     | . log creation = 0 s
[2026-01-10 19:19:31] 2026-01-11 00:18:58,346 | INFO     | ..............................
[2026-01-10 19:19:31] 2026-01-11 00:18:58,394 | INFO     | 
[2026-01-10 19:19:31] 2026-01-11 00:18:58,394 | INFO     | job summary report
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | --------------------------------------------------
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | PanDA job id: 6965803443
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | task id: 47962010
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | errors: (none)
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | pilot state: finished 
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | transexitcode: 0
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | exeerrorcode: 0
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | exeerrordiag: 
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | exitcode: 0
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | exitmsg: OK
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | cpuconsumptiontime: 7979 s
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | nevents: 50
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | neventsw: 0
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | pid: 1066824
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | pgrp: 1066824
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | corecount: 8
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | event service: False
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | sizes: {0: 2284344, 1: 2284599, 12: 2284599, 23: 2284627, 34: 2284655, 38: 2284945, 44: 2285101, 2673: 2311095, 2674: 2320145, 2682: 2320367}
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | --------------------------------------------------
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | 
[2026-01-10 19:19:31] 2026-01-11 00:18:58,395 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 19:19:31] 2026-01-11 00:18:58,412 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:19:31] 2026-01-11 00:18:58,412 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:19:31] 2026-01-11 00:18:58,412 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:19:31] 2026-01-11 00:18:58,413 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:19:31] 2026-01-11 00:18:58,413 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:19:31] 2026-01-11 00:18:58,413 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:19:31] 2026-01-11 00:18:58,413 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:19:31] 2026-01-11 00:18:58,413 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:19:31] 2026-01-11 00:18:58,413 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:19:31] 2026-01-11 00:18:58,413 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:19:31] 2026-01-11 00:18:58,413 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:19:31] 2026-01-11 00:18:58,413 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:19:31] 2026-01-11 00:18:58,413 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:19:31] 2026-01-11 00:18:58,413 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:19:31] 2026-01-11 00:18:58,413 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:19:31] 2026-01-11 00:18:58,413 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:19:31] 2026-01-11 00:18:58,413 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:19:31] 2026-01-11 00:18:58,413 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:19:31] 2026-01-11 00:18:58,413 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:19:31] 2026-01-11 00:18:58,413 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:19:31] 2026-01-11 00:18:58,413 | INFO     | job 6965803443 has completed (purged errors)
[2026-01-10 19:19:31] 2026-01-11 00:18:58,413 | INFO     | overall cleanup function is called
[2026-01-10 19:19:31] 2026-01-11 00:18:59,425 | INFO     | --- collectZombieJob: --- 10, [1066824]
[2026-01-10 19:19:31] 2026-01-11 00:18:59,425 | INFO     | zombie collector waiting for pid 1066824
[2026-01-10 19:19:31] 2026-01-11 00:18:59,425 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:19:31] 2026-01-11 00:18:59,425 | INFO     | collected zombie processes
[2026-01-10 19:19:31] 2026-01-11 00:18:59,426 | INFO     | will attempt to kill all subprocesses of pid=1066824
[2026-01-10 19:19:31] 2026-01-11 00:18:59,834 | INFO     | process IDs to be killed: [1066824] (in reverse order)
[2026-01-10 19:19:31] 2026-01-11 00:18:59,966 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:19:31] 2026-01-11 00:18:59,967 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:19:31] 2026-01-11 00:18:59,983 | INFO     | did not find any defunct processes belonging to 1066824
[2026-01-10 19:19:31] 2026-01-11 00:18:59,999 | INFO     | did not find any defunct processes belonging to 1066824
[2026-01-10 19:19:31] 2026-01-11 00:19:00,000 | INFO     | ready for new job
[2026-01-10 19:19:31] 2026-01-11 00:19:00,000 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:19:31] 2026-01-11 00:19:00,001 | INFO     | ***************************************
[2026-01-10 19:19:31] 2026-01-11 00:19:00,001 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:19:31] 2026-01-11 00:19:00,001 | INFO     | ***************************************
[2026-01-10 19:19:31] 2026-01-11 00:19:00,001 | INFO     | 
[2026-01-10 19:19:31] 2026-01-11 00:19:00,005 | INFO     | architecture information:
[2026-01-10 19:19:31] 2026-01-11 00:19:00,006 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:19:31] 2026-01-11 00:19:00,050 | INFO     | cat /etc/os-release:
[2026-01-10 19:19:31] NAME="CentOS Linux"
[2026-01-10 19:19:31] VERSION="7 (Core)"
[2026-01-10 19:19:31] ID="centos"
[2026-01-10 19:19:31] ID_LIKE="rhel fedora"
[2026-01-10 19:19:31] VERSION_ID="7"
[2026-01-10 19:19:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:19:31] ANSI_COLOR="0;31"
[2026-01-10 19:19:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:19:31] HOME_URL="https://www.centos.org/"
[2026-01-10 19:19:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:19:31] 
[2026-01-10 19:19:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:19:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:19:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:19:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:19:31] 
[2026-01-10 19:19:31] 2026-01-11 00:19:00,050 | INFO     | ***************************************
[2026-01-10 19:19:31] 2026-01-11 00:19:00,554 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 19:19:31] 2026-01-11 00:19:00,583 | INFO     | sufficient remaining disk space (173502627840 B)
[2026-01-10 19:19:31] 2026-01-11 00:19:00,583 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:19:31] 2026-01-11 00:19:00,584 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:19:31] 2026-01-11 00:19:00,584 | INFO     | update_server=False
[2026-01-10 19:19:31] 2026-01-11 00:19:00,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:19:31] 2026-01-11 00:19:00,750 | INFO     | all data control threads have been joined
[2026-01-10 19:19:31] 2026-01-11 00:19:00,755 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:19:31] 2026-01-11 00:19:00,755 | INFO     | aborting loop
[2026-01-10 19:19:31] 2026-01-11 00:19:00,857 | INFO     | all payload control threads have been joined
[2026-01-10 19:19:31] 2026-01-11 00:19:01,586 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:19:31] 2026-01-11 00:19:01,590 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:19:31] 2026-01-11 00:19:01,624 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:19:31] 2026-01-11 00:19:01,675 | INFO     | all job control threads have been joined
[2026-01-10 19:19:31] 2026-01-11 00:19:01,756 | INFO     | [data] control thread has finished
[2026-01-10 19:19:31] 2026-01-11 00:19:01,761 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:19:31] 2026-01-11 00:19:01,862 | INFO     | [payload] control thread has finished
[2026-01-10 19:19:31] 2026-01-11 00:19:02,003 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:19:31] 2026-01-11 00:19:02,338 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:19:31] 2026-01-11 00:19:02,527 | INFO     | [job] validate thread has finished
[2026-01-10 19:19:31] 2026-01-11 00:19:02,652 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:19:31] 2026-01-11 00:19:02,680 | INFO     | [job] control thread has finished
[2026-01-10 19:19:31] 2026-01-11 00:19:02,769 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:19:31] 2026-01-11 00:19:03,004 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:19:31] 2026-01-11 00:19:03,012 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:19:31] 2026-01-11 00:19:03,407 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:19:31] 2026-01-11 00:19:03,597 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:19:31] 2026-01-11 00:19:04,412 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:19:31] 2026-01-11 00:19:04,660 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:19:31] 2026-01-11 00:19:05,630 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:19:31] 2026-01-11 00:19:10,845 | INFO     | job.realtimelogging is not enabled
[2026-01-10 19:19:31] 2026-01-11 00:19:11,852 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:19:31] 2026-01-11 00:19:12,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139861505730368)>', '<ExcThread(monitor, started 139860971087616)>']
[2026-01-10 19:19:31] 2026-01-11 00:19:17,065 | INFO     | all workflow threads have been joined
[2026-01-10 19:19:31] 2026-01-11 00:19:17,067 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:19:31] 2026-01-11 00:19:17,067 | INFO     | traces error code: 0
[2026-01-10 19:19:31] 2026-01-11 00:19:17,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:19:31] 2026-01-11 00:19:30,707 | INFO     | PID=1055106 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:19:31] 2026-01-11 00:19:30,707 | INFO     | .. there are 17 such processes running
[2026-01-10 19:19:31] 2026-01-11 00:19:30,707 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:19:31] 2026-01-11 00:19:30,707 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:19:31] 2026-01-11 00:19:30,707 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:19:31] 2026-01-11 00:19:30,707 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:19:31] 2026-01-11 00:19:30,707 | CRITICAL | thread 'MainThread' is not alive
[2026-01-10 19:19:31] 2026-01-11 00:19:30,707 | INFO     | [monitor] control thread has ended
[2026-01-10 19:19:31] 2026-01-11 00:19:30,858 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:19:31] 2026-01-11 00:19:30,861 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:19:31] 2026-01-11 00:19:30,864 [wrapper] pilotpid: 1055106
[2026-01-10 19:19:31] 2026-01-11 00:19:30,867 [wrapper] Pilot exit status: 0
[2026-01-10 19:19:31] 2026-01-11 00:19:30,878 [wrapper] pandaids: 6965803443
[2026-01-10 19:19:31] 2026-01-11 00:19:30,972 [wrapper] cleanup supervisor_pilot 1188219 1055107
[2026-01-10 19:19:31] 2026-01-11 00:19:30,975 [wrapper] Test setup, not cleaning
[2026-01-10 19:19:31] 2026-01-11 00:19:30,977 [wrapper] apfmon messages muted
[2026-01-10 19:19:31] 2026-01-11 00:19:30,979 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:19:31] 2026-01-11 00:19:30,981 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:19:31]  *** Error codes and diagnostics ***
[2026-01-10 19:19:31]     "exeErrorCode": 0,
[2026-01-10 19:19:31]     "exeErrorDiag": "",
[2026-01-10 19:19:31]     "pilotErrorCode": 0,
[2026-01-10 19:19:31]     "pilotErrorDiag": "",
[2026-01-10 19:19:31]  *** Listing of results directory ***
[2026-01-10 19:19:31] total 437180
[2026-01-10 19:19:31] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:19:31] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 19:19:31] -rwx------. 1 boincer umatlas     36322 Jan 10 18:05 runpilot2-wrapper.sh
[2026-01-10 19:19:31] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:19:31] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:31 run_atlas
[2026-01-10 19:19:31] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:31 job.xml
[2026-01-10 19:19:31] -rw-r--r--. 2 boincer umatlas 393319043 Jan 10 18:31 EVNT.47962006._000127.pool.root.1
[2026-01-10 19:19:31] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:31 start_atlas.sh
[2026-01-10 19:19:31] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:31 shared
[2026-01-10 19:19:31] -rw-r--r--. 2 boincer umatlas    592614 Jan 10 18:31 input.tar.gz
[2026-01-10 19:19:31] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:31 boinc_lockfile
[2026-01-10 19:19:31] -rw-r--r--. 1 boincer umatlas      2891 Jan 10 18:31 pandaJob.out
[2026-01-10 19:19:31] -rw-------. 1 boincer umatlas        57 Jan 10 18:31 setup.sh.local
[2026-01-10 19:19:31] -rw-------. 1 boincer umatlas    989548 Jan 10 18:32 agis_schedconf.cvmfs.json
[2026-01-10 19:19:31] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:32 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:19:31] drwx------. 5 boincer umatlas      4096 Jan 10 18:33 pilot3
[2026-01-10 19:19:31] -rw-r--r--. 1 boincer umatlas      7183 Jan 10 19:09 init_data.xml
[2026-01-10 19:19:31] -rw-r--r--. 1 boincer umatlas       529 Jan 10 19:14 boinc_task_state.xml
[2026-01-10 19:19:31] -rw-------. 1 boincer umatlas  47261333 Jan 10 19:18 HITS.47962010._002895.pool.root.1
[2026-01-10 19:19:31] -rw-------. 1 boincer umatlas        95 Jan 10 19:18 pilot_heartbeat.json
[2026-01-10 19:19:31] -rw-------. 1 boincer umatlas      1030 Jan 10 19:18 memory_monitor_summary.json
[2026-01-10 19:19:31] -rw-------. 1 boincer umatlas   1177032 Jan 10 19:18 log.47962010._002895.job.log.tgz.1
[2026-01-10 19:19:31] -rw-------. 1 boincer umatlas      8520 Jan 10 19:18 heartbeat.json
[2026-01-10 19:19:31] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 19:19 boinc_mmap_file
[2026-01-10 19:19:31] -rw-r--r--. 1 boincer umatlas        26 Jan 10 19:19 wrapper_checkpoint.txt
[2026-01-10 19:19:31] -rw-------. 1 boincer umatlas       893 Jan 10 19:19 pilotlog.txt
[2026-01-10 19:19:31] -rw-------. 1 boincer umatlas    412021 Jan 10 19:19 log.47962010._002895.job.log.1
[2026-01-10 19:19:31] -rw-------. 1 boincer umatlas       353 Jan 10 19:19 output.list
[2026-01-10 19:19:31] -rw-r--r--. 1 boincer umatlas       620 Jan 10 19:19 runtime_log
[2026-01-10 19:19:31] -rw-------. 1 boincer umatlas   1607680 Jan 10 19:19 result.tar.gz
[2026-01-10 19:19:31] -rw-------. 1 boincer umatlas       651 Jan 10 19:19 YFNLDmKCxy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmixmKDm2FGORm.diag
[2026-01-10 19:19:31] -rw-r--r--. 1 boincer umatlas      9342 Jan 10 19:19 runtime_log.err
[2026-01-10 19:19:31] -rw-r--r--. 1 boincer umatlas     21892 Jan 10 19:19 stderr.txt
[2026-01-10 19:19:31] HITS file was successfully produced:
[2026-01-10 19:19:31] -rw-------. 1 boincer umatlas 47261333 Jan 10 19:18 shared/HITS.pool.root.1
[2026-01-10 19:19:31]  *** Contents of shared directory: ***
[2026-01-10 19:19:31] total 432428
[2026-01-10 19:19:31] -rw-r--r--. 2 boincer umatlas 393319043 Jan 10 18:31 ATLAS.root_0
[2026-01-10 19:19:31] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:31 start_atlas.sh
[2026-01-10 19:19:31] -rw-r--r--. 2 boincer umatlas    592614 Jan 10 18:31 input.tar.gz
[2026-01-10 19:19:31] -rw-------. 1 boincer umatlas  47261333 Jan 10 19:18 HITS.pool.root.1
[2026-01-10 19:19:31] -rw-------. 1 boincer umatlas   1607680 Jan 10 19:19 result.tar.gz
19:19:32 (1049695): run_atlas exited; CPU time 8007.186782
19:19:32 (1049695): called boinc_finish(0)

</stderr_txt>
]]>

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