Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:09:44 (1494115): wrapper (7.7.26015): starting
18:09:44 (1494115): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 18:09:44] Arguments: --nthreads 9
[2026-01-10 18:09:44] Threads: 9
[2026-01-10 18:09:44] Checking for CVMFS
[2026-01-10 18:09:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:09:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:09:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:09:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:09:45] 2.13.3.0 12525 95356 175352 154996 3 63 20995412 40960001 17407 16776704 0 531761674 99.654 496315624 35659 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 18:09:45] CVMFS is ok
[2026-01-10 18:09:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:09:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:09:45] Further information can be found at the LHC@home message board.
[2026-01-10 18:09:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:09:45] Checking for apptainer binary...
[2026-01-10 18:09:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:09:45] Running /usr/bin/apptainer --version
[2026-01-10 18:09:45] apptainer version 1.4.5-2.el9
[2026-01-10 18:09:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:09:45] c7-4-30.aglt2.org
[2026-01-10 18:09:45] apptainer works
[2026-01-10 18:09:45] Set ATHENA_PROC_NUMBER=9
[2026-01-10 18:09:45] Set ATHENA_CORE_NUMBER=9
[2026-01-10 18:09:45] Starting ATLAS job with PandaID=6965803438
[2026-01-10 18:09:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 21:18:46]  *** The last 200 lines of the pilot log: ***
[2026-01-10 21:18:47] 2026-01-11 02:17:46,220 | INFO     | extracted standard info from prmon json
[2026-01-10 21:18:47] 2026-01-11 02:17:46,221 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 21:18:47] 2026-01-11 02:17:46,221 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 21:18:47] 2026-01-11 02:17:46,224 | INFO     | fitting pss+swap vs Time
[2026-01-10 21:18:47] 2026-01-11 02:17:46,225 | INFO     | sum of square deviations: 1933348854.4347904
[2026-01-10 21:18:47] 2026-01-11 02:17:46,234 | INFO     | sum of deviations: -42691041024.6087
[2026-01-10 21:18:47] 2026-01-11 02:17:46,234 | INFO     | mean x: 1768092265.826087
[2026-01-10 21:18:47] 2026-01-11 02:17:46,234 | INFO     | mean y: 2472799.4184782607
[2026-01-10 21:18:47] 2026-01-11 02:17:46,234 | INFO     | intersect: 39044417703.73929
[2026-01-10 21:18:47] 2026-01-11 02:17:46,234 | INFO     | chi2: 10.05910601129792
[2026-01-10 21:18:47] 2026-01-11 02:17:46,235 | INFO     | sum of square deviations: 1780304677.5754187
[2026-01-10 21:18:47] 2026-01-11 02:17:46,236 | INFO     | sum of deviations: 15766096366.28487
[2026-01-10 21:18:47] 2026-01-11 02:17:46,236 | INFO     | mean x: 1768092113.4189944
[2026-01-10 21:18:47] 2026-01-11 02:17:46,236 | INFO     | mean y: 2530956.9162011174
[2026-01-10 21:18:47] 2026-01-11 02:17:46,236 | INFO     | intersect: -15655412874.69587
[2026-01-10 21:18:47] 2026-01-11 02:17:46,236 | INFO     | chi2: 5.9240458057696275
[2026-01-10 21:18:47] 2026-01-11 02:17:46,236 | INFO     | current chi2=5.9240458057696275 (change=41.107631243611365 %)
[2026-01-10 21:18:47] 2026-01-11 02:17:46,237 | INFO     | sum of square deviations: 1635586234.9482813
[2026-01-10 21:18:47] 2026-01-11 02:17:46,244 | INFO     | sum of deviations: 55138675036.68967
[2026-01-10 21:18:47] 2026-01-11 02:17:46,244 | INFO     | mean x: 1768091961.0172415
[2026-01-10 21:18:47] 2026-01-11 02:17:46,244 | INFO     | mean y: 2572165.7701149425
[2026-01-10 21:18:47] 2026-01-11 02:17:46,244 | INFO     | intersect: -59603119047.81226
[2026-01-10 21:18:47] 2026-01-11 02:17:46,244 | INFO     | chi2: 3.790039975669432
[2026-01-10 21:18:47] 2026-01-11 02:17:46,244 | INFO     | current chi2=3.790039975669432 (change=36.0227773394631 %)
[2026-01-10 21:18:47] 2026-01-11 02:17:46,245 | INFO     | sum of square deviations: 1498865971.4674554
[2026-01-10 21:18:47] 2026-01-11 02:17:46,245 | INFO     | sum of deviations: 75959529864.34317
[2026-01-10 21:18:47] 2026-01-11 02:17:46,246 | INFO     | mean x: 1768091808.5680473
[2026-01-10 21:18:47] 2026-01-11 02:17:46,246 | INFO     | mean y: 2595340.100591716
[2026-01-10 21:18:47] 2026-01-11 02:17:46,246 | INFO     | intersect: -89600761525.98143
[2026-01-10 21:18:47] 2026-01-11 02:17:46,246 | INFO     | chi2: 3.1473184405066115
[2026-01-10 21:18:47] 2026-01-11 02:17:46,246 | INFO     | current chi2=3.1473184405066115 (change=16.95817298204875 %)
[2026-01-10 21:18:47] 2026-01-11 02:17:46,246 | INFO     | right removable region: 168
[2026-01-10 21:18:47] 2026-01-11 02:17:46,246 | INFO     | sum of square deviations: 1779931357.5754187
[2026-01-10 21:18:47] 2026-01-11 02:17:46,253 | INFO     | sum of deviations: -90773809247.10057
[2026-01-10 21:18:47] 2026-01-11 02:17:46,254 | INFO     | mean x: 1768092418.4189944
[2026-01-10 21:18:47] 2026-01-11 02:17:46,254 | INFO     | mean y: 2520418.441340782
[2026-01-10 21:18:47] 2026-01-11 02:17:46,254 | INFO     | intersect: 90172561660.61324
[2026-01-10 21:18:47] 2026-01-11 02:17:46,254 | INFO     | chi2: 7.392696711784781
[2026-01-10 21:18:47] 2026-01-11 02:17:46,254 | INFO     | current chi2=7.392696711784781 (change=26.50741821905796 %)
[2026-01-10 21:18:47] 2026-01-11 02:17:46,254 | INFO     | sum of square deviations: 1634861444.9942548
[2026-01-10 21:18:47] 2026-01-11 02:17:46,255 | INFO     | sum of deviations: -96954259674.77588
[2026-01-10 21:18:47] 2026-01-11 02:17:46,255 | INFO     | mean x: 1768092571.005747
[2026-01-10 21:18:47] 2026-01-11 02:17:46,255 | INFO     | mean y: 2526919.775862069
[2026-01-10 21:18:47] 2026-01-11 02:17:46,256 | INFO     | intersect: 104857960866.92343
[2026-01-10 21:18:47] 2026-01-11 02:17:46,256 | INFO     | chi2: 7.282516964499631
[2026-01-10 21:18:47] 2026-01-11 02:17:46,256 | INFO     | current chi2=7.282516964499631 (change=1.4903864121669146 %)
[2026-01-10 21:18:47] 2026-01-11 02:17:46,256 | INFO     | left removable region: 20
[2026-01-10 21:18:47] 2026-01-11 02:17:46,256 | INFO     | sum of square deviations: 1006758415.0
[2026-01-10 21:18:47] 2026-01-11 02:17:46,257 | INFO     | sum of deviations: 8113094659.500004
[2026-01-10 21:18:47] 2026-01-11 02:17:46,257 | INFO     | mean x: 1768092388.5
[2026-01-10 21:18:47] 2026-01-11 02:17:46,257 | INFO     | mean y: 2687329.695945946
[2026-01-10 21:18:47] 2026-01-11 02:17:46,257 | INFO     | intersect: -14245716955.697542
[2026-01-10 21:18:47] 2026-01-11 02:17:46,257 | INFO     | chi2: 0.20165052433317335
[2026-01-10 21:18:47] 2026-01-11 02:17:46,258 | INFO     | current memory leak: 8.06 B/s (using 148 data points, chi2=0.20)
[2026-01-10 21:18:47] 2026-01-11 02:17:46,259 | INFO     | could have reported an average CPU frequency of 3175 MHz (10 samples)
[2026-01-10 21:18:47] 2026-01-11 02:17:46,259 | INFO     | ..............................
[2026-01-10 21:18:47] 2026-01-11 02:17:46,259 | INFO     | . Timing measurements:
[2026-01-10 21:18:47] 2026-01-11 02:17:46,259 | INFO     | . get job = 0 s
[2026-01-10 21:18:47] 2026-01-11 02:17:46,260 | INFO     | . initial setup = 4 s
[2026-01-10 21:18:47] 2026-01-11 02:17:46,260 | INFO     | . payload setup = 21 s
[2026-01-10 21:18:47] 2026-01-11 02:17:46,260 | INFO     | . stage-in = 0 s
[2026-01-10 21:18:47] 2026-01-11 02:17:46,260 | INFO     | . payload execution = 11179 s
[2026-01-10 21:18:47] 2026-01-11 02:17:46,260 | INFO     | . stage-out = 2 s
[2026-01-10 21:18:47] 2026-01-11 02:17:46,260 | INFO     | . log creation = 0 s
[2026-01-10 21:18:47] 2026-01-11 02:17:46,271 | INFO     | ..............................
[2026-01-10 21:18:47] 2026-01-11 02:17:46,400 | INFO     | 
[2026-01-10 21:18:47] 2026-01-11 02:17:46,400 | INFO     | job summary report
[2026-01-10 21:18:47] 2026-01-11 02:17:46,400 | INFO     | --------------------------------------------------
[2026-01-10 21:18:47] 2026-01-11 02:17:46,400 | INFO     | PanDA job id: 6965803438
[2026-01-10 21:18:47] 2026-01-11 02:17:46,400 | INFO     | task id: 47962010
[2026-01-10 21:18:47] 2026-01-11 02:17:46,401 | INFO     | errors: (none)
[2026-01-10 21:18:47] 2026-01-11 02:17:46,401 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 21:18:47] 2026-01-11 02:17:46,401 | INFO     | pilot state: finished 
[2026-01-10 21:18:47] 2026-01-11 02:17:46,401 | INFO     | transexitcode: 0
[2026-01-10 21:18:47] 2026-01-11 02:17:46,401 | INFO     | exeerrorcode: 0
[2026-01-10 21:18:47] 2026-01-11 02:17:46,401 | INFO     | exeerrordiag: 
[2026-01-10 21:18:47] 2026-01-11 02:17:46,401 | INFO     | exitcode: 0
[2026-01-10 21:18:47] 2026-01-11 02:17:46,401 | INFO     | exitmsg: OK
[2026-01-10 21:18:47] 2026-01-11 02:17:46,401 | INFO     | cpuconsumptiontime: 12957 s
[2026-01-10 21:18:47] 2026-01-11 02:17:46,401 | INFO     | nevents: 50
[2026-01-10 21:18:47] 2026-01-11 02:17:46,401 | INFO     | neventsw: 0
[2026-01-10 21:18:47] 2026-01-11 02:17:46,401 | INFO     | pid: 1522561
[2026-01-10 21:18:47] 2026-01-11 02:17:46,401 | INFO     | pgrp: 1522561
[2026-01-10 21:18:47] 2026-01-11 02:17:46,401 | INFO     | corecount: 9
[2026-01-10 21:18:47] 2026-01-11 02:17:46,402 | INFO     | event service: False
[2026-01-10 21:18:47] 2026-01-11 02:17:46,402 | INFO     | sizes: {0: 2284571, 10: 2284833, 11: 2284861, 11205: 2314874, 11206: 2314873, 11209: 2324107, 11219: 2324297}
[2026-01-10 21:18:47] 2026-01-11 02:17:46,402 | INFO     | --------------------------------------------------
[2026-01-10 21:18:47] 2026-01-11 02:17:46,402 | INFO     | 
[2026-01-10 21:18:47] 2026-01-11 02:17:46,402 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 21:18:47] 2026-01-11 02:17:46,556 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 21:18:47] 2026-01-11 02:17:46,557 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 21:18:47] 2026-01-11 02:17:46,557 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 21:18:47] 2026-01-11 02:17:46,557 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 21:18:47] 2026-01-11 02:17:46,557 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 21:18:47] 2026-01-11 02:17:46,557 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 21:18:47] 2026-01-11 02:17:46,557 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 21:18:47] 2026-01-11 02:17:46,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 21:18:47] 2026-01-11 02:17:46,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 21:18:47] 2026-01-11 02:17:46,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 21:18:47] 2026-01-11 02:17:46,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 21:18:47] 2026-01-11 02:17:46,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 21:18:47] 2026-01-11 02:17:46,557 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 21:18:47] 2026-01-11 02:17:46,558 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 21:18:47] 2026-01-11 02:17:46,558 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 21:18:47] 2026-01-11 02:17:46,558 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 21:18:47] 2026-01-11 02:17:46,558 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 21:18:47] 2026-01-11 02:17:46,558 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 21:18:47] 2026-01-11 02:17:46,558 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 21:18:47] 2026-01-11 02:17:46,558 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 21:18:47] 2026-01-11 02:17:46,558 | INFO     | job 6965803438 has completed (purged errors)
[2026-01-10 21:18:47] 2026-01-11 02:17:46,558 | INFO     | overall cleanup function is called
[2026-01-10 21:18:47] 2026-01-11 02:17:47,606 | INFO     | --- collectZombieJob: --- 10, [1522561]
[2026-01-10 21:18:47] 2026-01-11 02:17:47,606 | INFO     | zombie collector waiting for pid 1522561
[2026-01-10 21:18:47] 2026-01-11 02:17:47,607 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 21:18:47] 2026-01-11 02:17:47,607 | INFO     | collected zombie processes
[2026-01-10 21:18:47] 2026-01-11 02:17:47,607 | INFO     | will attempt to kill all subprocesses of pid=1522561
[2026-01-10 21:18:47] 2026-01-11 02:17:48,535 | INFO     | process IDs to be killed: [1522561] (in reverse order)
[2026-01-10 21:18:47] 2026-01-11 02:17:48,669 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 21:18:47] 2026-01-11 02:17:48,670 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 21:18:47] 2026-01-11 02:17:48,696 | INFO     | did not find any defunct processes belonging to 1522561
[2026-01-10 21:18:47] 2026-01-11 02:17:48,712 | INFO     | did not find any defunct processes belonging to 1522561
[2026-01-10 21:18:47] 2026-01-11 02:17:48,712 | INFO     | ready for new job
[2026-01-10 21:18:47] 2026-01-11 02:17:48,712 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 21:18:47] 2026-01-11 02:17:48,718 | INFO     | ***************************************
[2026-01-10 21:18:47] 2026-01-11 02:17:48,718 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 21:18:47] 2026-01-11 02:17:48,719 | INFO     | ***************************************
[2026-01-10 21:18:47] 2026-01-11 02:17:48,719 | INFO     | 
[2026-01-10 21:18:47] 2026-01-11 02:17:48,736 | INFO     | architecture information:
[2026-01-10 21:18:47] 2026-01-11 02:17:48,758 | INFO     | executing command: cat /etc/os-release
[2026-01-10 21:18:47] 2026-01-11 02:17:48,813 | INFO     | cat /etc/os-release:
[2026-01-10 21:18:47] NAME="CentOS Linux"
[2026-01-10 21:18:47] VERSION="7 (Core)"
[2026-01-10 21:18:47] ID="centos"
[2026-01-10 21:18:47] ID_LIKE="rhel fedora"
[2026-01-10 21:18:47] VERSION_ID="7"
[2026-01-10 21:18:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 21:18:47] ANSI_COLOR="0;31"
[2026-01-10 21:18:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 21:18:47] HOME_URL="https://www.centos.org/"
[2026-01-10 21:18:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 21:18:47] 
[2026-01-10 21:18:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 21:18:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 21:18:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 21:18:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 21:18:47] 
[2026-01-10 21:18:47] 2026-01-11 02:17:48,813 | INFO     | ***************************************
[2026-01-10 21:18:47] 2026-01-11 02:17:49,317 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 21:18:47] 2026-01-11 02:17:49,422 | INFO     | sufficient remaining disk space (127854968832 B)
[2026-01-10 21:18:47] 2026-01-11 02:17:49,423 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 21:18:47] 2026-01-11 02:17:49,423 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 21:18:47] 2026-01-11 02:17:49,423 | INFO     | update_server=False
[2026-01-10 21:18:47] 2026-01-11 02:17:49,423 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 21:18:47] 2026-01-11 02:17:49,464 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 21:18:47] 2026-01-11 02:17:49,654 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:18:47] 2026-01-11 02:17:49,655 | INFO     | aborting loop
[2026-01-10 21:18:47] 2026-01-11 02:17:50,255 | INFO     | all data control threads have been joined
[2026-01-10 21:18:47] 2026-01-11 02:17:50,366 | INFO     | all payload control threads have been joined
[2026-01-10 21:18:47] 2026-01-11 02:17:50,428 | INFO     | [job] retrieve thread has finished
[2026-01-10 21:18:47] 2026-01-11 02:17:50,548 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 21:18:47] 2026-01-11 02:17:50,552 | INFO     | [job] validate thread has finished
[2026-01-10 21:18:47] 2026-01-11 02:17:50,615 | INFO     | [payload] validate_post thread has finished
[2026-01-10 21:18:47] 2026-01-11 02:17:50,660 | INFO     | [job] job monitor thread has finished
[2026-01-10 21:18:47] 2026-01-11 02:17:50,705 | INFO     | all job control threads have been joined
[2026-01-10 21:18:47] 2026-01-11 02:17:51,054 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 21:18:47] 2026-01-11 02:17:51,261 | INFO     | [data] control thread has finished
[2026-01-10 21:18:47] 2026-01-11 02:17:51,356 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 21:18:47] 2026-01-11 02:17:51,372 | INFO     | [payload] control thread has finished
[2026-01-10 21:18:47] 2026-01-11 02:17:51,413 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:18:47] 2026-01-11 02:17:51,470 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 21:18:47] 2026-01-11 02:17:51,471 | INFO     | [data] copytool_out thread has finished
[2026-01-10 21:18:47] 2026-01-11 02:17:51,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 21:18:47] 2026-01-11 02:17:51,596 | INFO     | [payload] failed_post thread has finished
[2026-01-10 21:18:47] 2026-01-11 02:17:51,644 | INFO     | [data] copytool_in thread has finished
[2026-01-10 21:18:47] 2026-01-11 02:17:51,711 | INFO     | [job] control thread has finished
[2026-01-10 21:18:47] 2026-01-11 02:17:52,419 | INFO     | [job] queue monitor thread has finished
[2026-01-10 21:18:47] 2026-01-11 02:17:55,530 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 21:18:47] 2026-01-11 02:18:18,882 | INFO     | PID=1502748 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 21:18:47] 2026-01-11 02:18:18,883 | INFO     | .. there are 15 such processes running
[2026-01-10 21:18:47] 2026-01-11 02:18:18,883 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 21:18:47] 2026-01-11 02:18:18,883 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 21:18:47] 2026-01-11 02:18:18,884 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 21:18:47] 2026-01-11 02:18:39,165 | INFO     | [monitor] cgroup control has ended
[2026-01-10 21:18:47] 2026-01-11 02:18:40,912 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140436551792448)>', '<ExcThread(monitor, started 140435741722368)>']
[2026-01-10 21:18:47] 2026-01-11 02:18:41,021 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 21:18:47] 2026-01-11 02:18:41,022 | INFO     | [monitor] control thread has ended
[2026-01-10 21:18:47] 2026-01-11 02:18:45,937 | INFO     | all workflow threads have been joined
[2026-01-10 21:18:47] 2026-01-11 02:18:45,937 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 21:18:47] 2026-01-11 02:18:45,938 | INFO     | traces error code: 0
[2026-01-10 21:18:47] 2026-01-11 02:18:45,938 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 21:18:47] 2026-01-11 02:18:46,427 [wrapper] ==== pilot stdout END ====
[2026-01-10 21:18:47] 2026-01-11 02:18:46,449 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 21:18:47] 2026-01-11 02:18:46,454 [wrapper] pilotpid: 1502748
[2026-01-10 21:18:47] 2026-01-11 02:18:46,460 [wrapper] Pilot exit status: 0
[2026-01-10 21:18:47] 2026-01-11 02:18:46,520 [wrapper] pandaids: 6965803438
[2026-01-10 21:18:47] 2026-01-11 02:18:46,627 [wrapper] cleanup supervisor_pilot 1953246 1502749
[2026-01-10 21:18:47] 2026-01-11 02:18:46,630 [wrapper] Test setup, not cleaning
[2026-01-10 21:18:47] 2026-01-11 02:18:46,632 [wrapper] apfmon messages muted
[2026-01-10 21:18:47] 2026-01-11 02:18:46,644 [wrapper] ==== wrapper stdout END ====
[2026-01-10 21:18:47] 2026-01-11 02:18:46,680 [wrapper] ==== wrapper stderr END ====
[2026-01-10 21:18:47]  *** Error codes and diagnostics ***
[2026-01-10 21:18:47]     "exeErrorCode": 0,
[2026-01-10 21:18:47]     "exeErrorDiag": "",
[2026-01-10 21:18:47]     "pilotErrorCode": 0,
[2026-01-10 21:18:47]     "pilotErrorDiag": "",
[2026-01-10 21:18:47]  *** Listing of results directory ***
[2026-01-10 21:18:47] total 438564
[2026-01-10 21:18:47] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 21:18:47] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 21:18:47] -rwx------. 1 boincer umatlas     36322 Jan 10 18:05 runpilot2-wrapper.sh
[2026-01-10 21:18:47] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 21:18:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:09 run_atlas
[2026-01-10 21:18:47] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:09 job.xml
[2026-01-10 21:18:47] -rw-r--r--. 2 boincer umatlas 393319043 Jan 10 18:09 EVNT.47962006._000127.pool.root.1
[2026-01-10 21:18:47] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:09 start_atlas.sh
[2026-01-10 21:18:47] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:09 shared
[2026-01-10 21:18:47] -rw-r--r--. 2 boincer umatlas    592618 Jan 10 18:09 input.tar.gz
[2026-01-10 21:18:47] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:09 boinc_lockfile
[2026-01-10 21:18:47] -rw-r--r--. 1 boincer umatlas      2891 Jan 10 18:09 pandaJob.out
[2026-01-10 21:18:47] -rw-------. 1 boincer umatlas        57 Jan 10 18:09 setup.sh.local
[2026-01-10 21:18:47] -rw-------. 1 boincer umatlas    989548 Jan 10 18:10 agis_schedconf.cvmfs.json
[2026-01-10 21:18:47] drwx------. 5 boincer umatlas      4096 Jan 10 18:10 pilot3
[2026-01-10 21:18:47] -rw-r--r--. 1 boincer umatlas       530 Jan 10 20:53 boinc_task_state.xml
[2026-01-10 21:18:47] -rw-r--r--. 1 boincer umatlas      6946 Jan 10 21:11 init_data.xml
[2026-01-10 21:18:47] -rw-------. 1 boincer umatlas  46073136 Jan 10 21:17 HITS.47962010._002890.pool.root.1
[2026-01-10 21:18:47] -rw-------. 1 boincer umatlas      1042 Jan 10 21:17 memory_monitor_summary.json
[2026-01-10 21:18:47] -rw-------. 1 boincer umatlas   1516240 Jan 10 21:17 agis_ddmendpoints.agis.ALL.json
[2026-01-10 21:18:47] -rw-------. 1 boincer umatlas   1381265 Jan 10 21:17 log.47962010._002890.job.log.tgz.1
[2026-01-10 21:18:47] -rw-------. 1 boincer umatlas      8549 Jan 10 21:17 heartbeat.json
[2026-01-10 21:18:47] -rw-------. 1 boincer umatlas        95 Jan 10 21:18 pilot_heartbeat.json
[2026-01-10 21:18:47] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 21:18 boinc_mmap_file
[2026-01-10 21:18:47] -rw-r--r--. 1 boincer umatlas        28 Jan 10 21:18 wrapper_checkpoint.txt
[2026-01-10 21:18:47] -rw-------. 1 boincer umatlas      4825 Jan 10 21:18 pilotlog.txt
[2026-01-10 21:18:47] -rw-------. 1 boincer umatlas   1503772 Jan 10 21:18 log.47962010._002890.job.log.1
[2026-01-10 21:18:47] -rw-------. 1 boincer umatlas       353 Jan 10 21:18 output.list
[2026-01-10 21:18:47] -rw-r--r--. 1 boincer umatlas       620 Jan 10 21:18 runtime_log
[2026-01-10 21:18:47] -rw-------. 1 boincer umatlas   2908160 Jan 10 21:18 result.tar.gz
[2026-01-10 21:18:47] -rw-r--r--. 1 boincer umatlas      9338 Jan 10 21:18 runtime_log.err
[2026-01-10 21:18:47] -rw-------. 1 boincer umatlas       655 Jan 10 21:18 hvJLDmKCxy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfxmKDmRu0NGo.diag
[2026-01-10 21:18:47] -rw-r--r--. 1 boincer umatlas     20980 Jan 10 21:18 stderr.txt
[2026-01-10 21:18:47] HITS file was successfully produced:
[2026-01-10 21:18:47] -rw-------. 1 boincer umatlas 46073136 Jan 10 21:17 shared/HITS.pool.root.1
[2026-01-10 21:18:47]  *** Contents of shared directory: ***
[2026-01-10 21:18:47] total 432540
[2026-01-10 21:18:47] -rw-r--r--. 2 boincer umatlas 393319043 Jan 10 18:09 ATLAS.root_0
[2026-01-10 21:18:47] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:09 start_atlas.sh
[2026-01-10 21:18:47] -rw-r--r--. 2 boincer umatlas    592618 Jan 10 18:09 input.tar.gz
[2026-01-10 21:18:47] -rw-------. 1 boincer umatlas  46073136 Jan 10 21:17 HITS.pool.root.1
[2026-01-10 21:18:47] -rw-------. 1 boincer umatlas   2908160 Jan 10 21:18 result.tar.gz
21:18:48 (1494115): run_atlas exited; CPU time 13011.088019
21:18:48 (1494115): called boinc_finish(0)

</stderr_txt>
]]>

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