Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:10:39 (3928779): wrapper (7.7.26015): starting
18:10:39 (3928779): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 18:10:39] Arguments: --nthreads 9
[2026-01-10 18:10:39] Threads: 9
[2026-01-10 18:10:39] Checking for CVMFS
[2026-01-10 18:10:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:10:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:10:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:10:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:10:40] 2.13.3.0 10276 23466 108984 154996 3 67 33558532 40960000 20439 16776704 0 71642651 99.832 28219070 48759 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 18:10:40] CVMFS is ok
[2026-01-10 18:10:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:10:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:10:40] Further information can be found at the LHC@home message board.
[2026-01-10 18:10:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:10:40] Checking for apptainer binary...
[2026-01-10 18:10:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:10:40] Running /usr/bin/apptainer --version
[2026-01-10 18:10:40] apptainer version 1.4.5-2.el9
[2026-01-10 18:10:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:10:41] c-208-36.aglt2.org
[2026-01-10 18:10:41] apptainer works
[2026-01-10 18:10:41] Set ATHENA_PROC_NUMBER=9
[2026-01-10 18:10:41] Set ATHENA_CORE_NUMBER=9
[2026-01-10 18:10:41] Starting ATLAS job with PandaID=6965803182
[2026-01-10 18:10:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 18:55:03]  *** The last 200 lines of the pilot log: ***
[2026-01-10 18:55:03] 2026-01-10 23:53:59,832 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965803182/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 18:55:03] 2026-01-10 23:54:00,249 | INFO     | time since job start (2588s) is within the limit (349056.0s)
[2026-01-10 18:55:03] 2026-01-10 23:54:00,902 | INFO     | number of running child processes to parent process 3963386: 1
[2026-01-10 18:55:03] 2026-01-10 23:54:00,902 | INFO     | maximum number of monitored processes: 17
[2026-01-10 18:55:03] 2026-01-10 23:54:02,256 | INFO     | time since job start (2590s) is within the limit (349056.0s)
[2026-01-10 18:55:03] 2026-01-10 23:54:03,407 | INFO     | monitor loop #172: job 0:6965803182 is in state 'finished'
[2026-01-10 18:55:03] 2026-01-10 23:54:03,408 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:55:03] 2026-01-10 23:54:04,263 | INFO     | time since job start (2592s) is within the limit (349056.0s)
[2026-01-10 18:55:03] 2026-01-10 23:54:05,912 | INFO     | monitor loop #173: job 0:6965803182 is in state 'finished'
[2026-01-10 18:55:03] 2026-01-10 23:54:05,913 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:55:03] 2026-01-10 23:54:06,269 | INFO     | time since job start (2594s) is within the limit (349056.0s)
[2026-01-10 18:55:03] 2026-01-10 23:54:08,276 | INFO     | time since job start (2596s) is within the limit (349056.0s)
[2026-01-10 18:55:03] 2026-01-10 23:54:08,419 | INFO     | monitor loop #174: job 0:6965803182 is in state 'finished'
[2026-01-10 18:55:03] 2026-01-10 23:54:08,420 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:55:03] 2026-01-10 23:54:10,291 | INFO     | time since job start (2598s) is within the limit (349056.0s)
[2026-01-10 18:55:03] 2026-01-10 23:54:10,923 | INFO     | monitor loop #175: job 0:6965803182 is in state 'finished'
[2026-01-10 18:55:03] 2026-01-10 23:54:10,924 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:55:03] 2026-01-10 23:54:12,297 | INFO     | time since job start (2600s) is within the limit (349056.0s)
[2026-01-10 18:55:03] 2026-01-10 23:54:13,429 | INFO     | monitor loop #176: job 0:6965803182 is in state 'finished'
[2026-01-10 18:55:03] 2026-01-10 23:54:13,429 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:55:03] 2026-01-10 23:54:14,310 | INFO     | time since job start (2602s) is within the limit (349056.0s)
[2026-01-10 18:55:03] 2026-01-10 23:54:15,935 | INFO     | monitor loop #177: job 0:6965803182 is in state 'finished'
[2026-01-10 18:55:03] 2026-01-10 23:54:15,936 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:55:03] 2026-01-10 23:54:16,316 | INFO     | time since job start (2604s) is within the limit (349056.0s)
[2026-01-10 18:55:03] 2026-01-10 23:54:18,440 | INFO     | monitor loop #178: job 0:6965803182 is in state 'finished'
[2026-01-10 18:55:03] 2026-01-10 23:54:18,441 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:55:03] 2026-01-10 23:54:19,197 | INFO     | PID=3938764 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 18:55:03] 2026-01-10 23:54:19,197 | INFO     | .. there are 19 such processes running
[2026-01-10 18:55:03] 2026-01-10 23:54:20,197 | INFO     | time since job start (2608s) is within the limit (349056.0s)
[2026-01-10 18:55:03] 2026-01-10 23:54:20,945 | INFO     | monitor loop #179: job 0:6965803182 is in state 'finished'
[2026-01-10 18:55:03] 2026-01-10 23:54:20,946 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:55:03] 2026-01-10 23:54:22,205 | INFO     | time since job start (2610s) is within the limit (349056.0s)
[2026-01-10 18:55:03] 2026-01-10 23:54:23,449 | INFO     | monitor loop #180: job 0:6965803182 is in state 'finished'
[2026-01-10 18:55:03] 2026-01-10 23:54:23,450 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:55:03] 2026-01-10 23:54:24,211 | INFO     | time since job start (2612s) is within the limit (349056.0s)
[2026-01-10 18:55:03] 2026-01-10 23:54:25,954 | INFO     | monitor loop #181: job 0:6965803182 is in state 'finished'
[2026-01-10 18:55:03] 2026-01-10 23:54:25,955 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:55:03] 2026-01-10 23:54:26,226 | INFO     | time since job start (2614s) is within the limit (349056.0s)
[2026-01-10 18:55:03] 2026-01-10 23:54:28,119 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 18:55:03] 2026-01-10 23:54:28,130 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.2077265625016
[2026-01-10 18:55:03] 2026-01-10 23:54:28,162 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965803182/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 18:55:03] 2026-01-10 23:54:28,163 | INFO     | extracted standard info from prmon json
[2026-01-10 18:55:03] 2026-01-10 23:54:28,163 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 18:55:03] 2026-01-10 23:54:28,163 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 18:55:03] 2026-01-10 23:54:28,164 | INFO     | fitting pss+swap vs Time
[2026-01-10 18:55:03] 2026-01-10 23:54:28,164 | INFO     | sum of square deviations: 13271000.685714297
[2026-01-10 18:55:03] 2026-01-10 23:54:28,164 | INFO     | sum of deviations: -4628359965.342857
[2026-01-10 18:55:03] 2026-01-10 23:54:28,165 | INFO     | mean x: 1768088020.7428572
[2026-01-10 18:55:03] 2026-01-10 23:54:28,165 | INFO     | mean y: 2552136.6285714284
[2026-01-10 18:55:03] 2026-01-10 23:54:28,165 | INFO     | intersect: 616636369299.9099
[2026-01-10 18:55:03] 2026-01-10 23:54:28,165 | INFO     | chi2: 1.0017503930589473
[2026-01-10 18:55:03] 2026-01-10 23:54:28,165 | INFO     | current memory leak: -348.76 B/s (using 35 data points, chi2=1.00)
[2026-01-10 18:55:03] 2026-01-10 23:54:28,165 | INFO     | could have reported an average CPU frequency of 3780 MHz (5 samples)
[2026-01-10 18:55:03] 2026-01-10 23:54:28,165 | INFO     | ..............................
[2026-01-10 18:55:03] 2026-01-10 23:54:28,165 | INFO     | . Timing measurements:
[2026-01-10 18:55:03] 2026-01-10 23:54:28,165 | INFO     | . get job = 0 s
[2026-01-10 18:55:03] 2026-01-10 23:54:28,165 | INFO     | . initial setup = 2 s
[2026-01-10 18:55:03] 2026-01-10 23:54:28,165 | INFO     | . payload setup = 5 s
[2026-01-10 18:55:03] 2026-01-10 23:54:28,165 | INFO     | . stage-in = 0 s
[2026-01-10 18:55:03] 2026-01-10 23:54:28,165 | INFO     | . payload execution = 2560 s
[2026-01-10 18:55:03] 2026-01-10 23:54:28,165 | INFO     | . stage-out = 1 s
[2026-01-10 18:55:03] 2026-01-10 23:54:28,165 | INFO     | . log creation = 0 s
[2026-01-10 18:55:03] 2026-01-10 23:54:28,165 | INFO     | ..............................
[2026-01-10 18:55:03] 2026-01-10 23:54:28,241 | INFO     | time since job start (2616s) is within the limit (349056.0s)
[2026-01-10 18:55:03] 2026-01-10 23:54:28,307 | INFO     | 
[2026-01-10 18:55:03] 2026-01-10 23:54:28,307 | INFO     | job summary report
[2026-01-10 18:55:03] 2026-01-10 23:54:28,307 | INFO     | --------------------------------------------------
[2026-01-10 18:55:03] 2026-01-10 23:54:28,307 | INFO     | PanDA job id: 6965803182
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | task id: 47962010
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | errors: (none)
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | pilot state: finished 
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | transexitcode: 0
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | exeerrorcode: 0
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | exeerrordiag: 
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | exitcode: 0
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | exitmsg: OK
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | cpuconsumptiontime: 8294 s
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | nevents: 50
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | neventsw: 0
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | pid: 3963386
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | pgrp: 3963386
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | corecount: 9
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | event service: False
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | sizes: {0: 2284615, 4: 2284877, 11: 2284905, 2569: 2311004, 2571: 2320054, 2601: 2320276}
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | --------------------------------------------------
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | 
[2026-01-10 18:55:03] 2026-01-10 23:54:28,308 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 18:55:03] 2026-01-10 23:54:28,494 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 18:55:03] 2026-01-10 23:54:28,494 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 18:55:03] 2026-01-10 23:54:28,494 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 18:55:03] 2026-01-10 23:54:28,494 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 18:55:03] 2026-01-10 23:54:28,494 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 18:55:03] 2026-01-10 23:54:28,494 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 18:55:03] 2026-01-10 23:54:28,494 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 18:55:03] 2026-01-10 23:54:28,494 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 18:55:03] 2026-01-10 23:54:28,494 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 18:55:03] 2026-01-10 23:54:28,494 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 18:55:03] 2026-01-10 23:54:28,494 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 18:55:03] 2026-01-10 23:54:28,496 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 18:55:03] 2026-01-10 23:54:28,496 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 18:55:03] 2026-01-10 23:54:28,496 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 18:55:03] 2026-01-10 23:54:28,496 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 18:55:03] 2026-01-10 23:54:28,496 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 18:55:03] 2026-01-10 23:54:28,496 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 18:55:03] 2026-01-10 23:54:28,496 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 18:55:03] 2026-01-10 23:54:28,496 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 18:55:03] 2026-01-10 23:54:28,496 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 18:55:03] 2026-01-10 23:54:28,496 | INFO     | job 6965803182 has completed (purged errors)
[2026-01-10 18:55:03] 2026-01-10 23:54:28,496 | INFO     | overall cleanup function is called
[2026-01-10 18:55:03] 2026-01-10 23:54:29,517 | INFO     | --- collectZombieJob: --- 10, [3963386]
[2026-01-10 18:55:03] 2026-01-10 23:54:29,518 | INFO     | zombie collector waiting for pid 3963386
[2026-01-10 18:55:03] 2026-01-10 23:54:29,518 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 18:55:03] 2026-01-10 23:54:29,518 | INFO     | collected zombie processes
[2026-01-10 18:55:03] 2026-01-10 23:54:29,518 | INFO     | will attempt to kill all subprocesses of pid=3963386
[2026-01-10 18:55:03] 2026-01-10 23:54:30,137 | INFO     | process IDs to be killed: [3963386] (in reverse order)
[2026-01-10 18:55:03] 2026-01-10 23:54:30,500 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 18:55:03] 2026-01-10 23:54:30,500 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 18:55:03] 2026-01-10 23:54:30,536 | INFO     | did not find any defunct processes belonging to 3963386
[2026-01-10 18:55:03] 2026-01-10 23:54:30,554 | INFO     | did not find any defunct processes belonging to 3963386
[2026-01-10 18:55:03] 2026-01-10 23:54:30,554 | INFO     | ready for new job
[2026-01-10 18:55:03] 2026-01-10 23:54:30,554 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 18:55:03] 2026-01-10 23:54:30,561 | INFO     | ***************************************
[2026-01-10 18:55:03] 2026-01-10 23:54:30,561 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 18:55:03] 2026-01-10 23:54:30,561 | INFO     | ***************************************
[2026-01-10 18:55:03] 2026-01-10 23:54:30,561 | INFO     | 
[2026-01-10 18:55:03] 2026-01-10 23:54:30,565 | INFO     | architecture information:
[2026-01-10 18:55:03] 2026-01-10 23:54:30,566 | INFO     | executing command: cat /etc/os-release
[2026-01-10 18:55:03] 2026-01-10 23:54:30,672 | INFO     | cat /etc/os-release:
[2026-01-10 18:55:03] NAME="CentOS Linux"
[2026-01-10 18:55:03] VERSION="7 (Core)"
[2026-01-10 18:55:03] ID="centos"
[2026-01-10 18:55:03] ID_LIKE="rhel fedora"
[2026-01-10 18:55:03] VERSION_ID="7"
[2026-01-10 18:55:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 18:55:03] ANSI_COLOR="0;31"
[2026-01-10 18:55:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 18:55:03] HOME_URL="https://www.centos.org/"
[2026-01-10 18:55:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 18:55:03] 
[2026-01-10 18:55:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 18:55:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 18:55:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 18:55:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 18:55:03] 
[2026-01-10 18:55:03] 2026-01-10 23:54:30,672 | INFO     | ***************************************
[2026-01-10 18:55:03] 2026-01-10 23:54:31,176 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 18:55:03] 2026-01-10 23:54:31,280 | INFO     | sufficient remaining disk space (171776671744 B)
[2026-01-10 18:55:03] 2026-01-10 23:54:31,280 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 18:55:03] 2026-01-10 23:54:31,280 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 18:55:03] 2026-01-10 23:54:31,280 | INFO     | update_server=False
[2026-01-10 18:55:03] 2026-01-10 23:54:31,280 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 18:55:03] 2026-01-10 23:54:31,471 | INFO     | all job control threads have been joined
[2026-01-10 18:55:03] 2026-01-10 23:54:31,484 | INFO     | all data control threads have been joined
[2026-01-10 18:55:03] 2026-01-10 23:54:31,538 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 18:55:03] 2026-01-10 23:54:31,689 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 18:55:03] 2026-01-10 23:54:31,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 18:55:03] 2026-01-10 23:54:31,971 | INFO     | aborting loop
[2026-01-10 18:55:03] 2026-01-10 23:54:32,287 | INFO     | [job] retrieve thread has finished
[2026-01-10 18:55:03] 2026-01-10 23:54:32,296 | INFO     | [data] copytool_in thread has finished
[2026-01-10 18:55:03] 2026-01-10 23:54:32,325 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 18:55:03] 2026-01-10 23:54:32,478 | INFO     | [job] control thread has finished
[2026-01-10 18:55:03] 2026-01-10 23:54:32,490 | INFO     | [data] control thread has finished
[2026-01-10 18:55:03] 2026-01-10 23:54:32,777 | INFO     | [payload] failed_post thread has finished
[2026-01-10 18:55:03] 2026-01-10 23:54:32,783 | INFO     | all payload control threads have been joined
[2026-01-10 18:55:03] 2026-01-10 23:54:32,877 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 18:55:03] 2026-01-10 23:54:32,977 | INFO     | [job] job monitor thread has finished
[2026-01-10 18:55:03] 2026-01-10 23:54:33,126 | INFO     | [payload] validate_post thread has finished
[2026-01-10 18:55:03] 2026-01-10 23:54:33,244 | INFO     | [job] validate thread has finished
[2026-01-10 18:55:03] 2026-01-10 23:54:33,283 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 18:55:03] 2026-01-10 23:54:33,323 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 18:55:03] 2026-01-10 23:54:33,545 | INFO     | [data] copytool_out thread has finished
[2026-01-10 18:55:03] 2026-01-10 23:54:33,673 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 18:55:03] 2026-01-10 23:54:33,789 | INFO     | [payload] control thread has finished
[2026-01-10 18:55:03] 2026-01-10 23:54:34,329 | INFO     | [job] queue monitor thread has finished
[2026-01-10 18:55:03] 2026-01-10 23:54:35,698 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 18:55:03] 2026-01-10 23:54:56,075 | INFO     | [monitor] cgroup control has ended
[2026-01-10 18:55:03] 2026-01-10 23:54:56,967 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140695669954368)>', '<ExcThread(monitor, started 140695318808320)>']
[2026-01-10 18:55:03] 2026-01-10 23:55:01,996 | INFO     | all workflow threads have been joined
[2026-01-10 18:55:03] 2026-01-10 23:55:01,997 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 18:55:03] 2026-01-10 23:55:01,997 | INFO     | traces error code: 0
[2026-01-10 18:55:03] 2026-01-10 23:55:01,997 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 18:55:03] 2026-01-10 23:55:02,059 | INFO     | PID=3938764 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 18:55:03] 2026-01-10 23:55:02,059 | INFO     | .. there are 19 such processes running
[2026-01-10 18:55:03] 2026-01-10 23:55:02,060 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 18:55:03] 2026-01-10 23:55:02,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 18:55:03] 2026-01-10 23:55:02,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 18:55:03] 2026-01-10 23:55:02,060 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 18:55:03] 2026-01-10 23:55:02,060 | CRITICAL | thread 'MainThread' is not alive
[2026-01-10 18:55:03] 2026-01-10 23:55:02,060 | INFO     | [monitor] control thread has ended
[2026-01-10 18:55:03] 2026-01-10 23:55:02,146 [wrapper] ==== pilot stdout END ====
[2026-01-10 18:55:03] 2026-01-10 23:55:02,160 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 18:55:03] 2026-01-10 23:55:02,168 [wrapper] pilotpid: 3938764
[2026-01-10 18:55:03] 2026-01-10 23:55:02,179 [wrapper] Pilot exit status: 0
[2026-01-10 18:55:03] 2026-01-10 23:55:02,242 [wrapper] pandaids: 6965803182
[2026-01-10 18:55:03] 2026-01-10 23:55:02,571 [wrapper] cleanup supervisor_pilot 4122456 3938765
[2026-01-10 18:55:03] 2026-01-10 23:55:02,583 [wrapper] Test setup, not cleaning
[2026-01-10 18:55:03] 2026-01-10 23:55:02,589 [wrapper] apfmon messages muted
[2026-01-10 18:55:03] 2026-01-10 23:55:02,603 [wrapper] ==== wrapper stdout END ====
[2026-01-10 18:55:03] 2026-01-10 23:55:02,629 [wrapper] ==== wrapper stderr END ====
[2026-01-10 18:55:03]  *** Error codes and diagnostics ***
[2026-01-10 18:55:03]     "exeErrorCode": 0,
[2026-01-10 18:55:03]     "exeErrorDiag": "",
[2026-01-10 18:55:03]     "pilotErrorCode": 0,
[2026-01-10 18:55:03]     "pilotErrorDiag": "",
[2026-01-10 18:55:03]  *** Listing of results directory ***
[2026-01-10 18:55:03] total 434796
[2026-01-10 18:55:03] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 18:55:03] -rwx------. 1 boincer umatlas     36322 Jan 10 18:05 runpilot2-wrapper.sh
[2026-01-10 18:55:03] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 18:55:03] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 18:55:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:10 run_atlas
[2026-01-10 18:55:03] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:10 job.xml
[2026-01-10 18:55:03] -rw-r--r--. 2 boincer umatlas 392017497 Jan 10 18:10 EVNT.47962006._000005.pool.root.1
[2026-01-10 18:55:03] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 18:55:03] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:10 shared
[2026-01-10 18:55:03] -rw-r--r--. 2 boincer umatlas    592614 Jan 10 18:10 input.tar.gz
[2026-01-10 18:55:03] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:10 boinc_lockfile
[2026-01-10 18:55:03] -rw-r--r--. 1 boincer umatlas      2888 Jan 10 18:10 pandaJob.out
[2026-01-10 18:55:03] -rw-------. 1 boincer umatlas        57 Jan 10 18:10 setup.sh.local
[2026-01-10 18:55:03] -rw-------. 1 boincer umatlas    989548 Jan 10 18:10 agis_schedconf.cvmfs.json
[2026-01-10 18:55:03] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:10 agis_ddmendpoints.agis.ALL.json
[2026-01-10 18:55:03] drwx------. 5 boincer umatlas      4096 Jan 10 18:10 pilot3
[2026-01-10 18:55:03] -rw-r--r--. 1 boincer umatlas       528 Jan 10 18:43 boinc_task_state.xml
[2026-01-10 18:55:03] -rw-r--r--. 1 boincer umatlas      7181 Jan 10 18:46 init_data.xml
[2026-01-10 18:55:03] -rw-------. 1 boincer umatlas  45983492 Jan 10 18:53 HITS.47962010._002634.pool.root.1
[2026-01-10 18:55:03] -rw-------. 1 boincer umatlas      1038 Jan 10 18:53 memory_monitor_summary.json
[2026-01-10 18:55:03] -rw-------. 1 boincer umatlas   1259156 Jan 10 18:53 log.47962010._002634.job.log.tgz.1
[2026-01-10 18:55:03] -rw-------. 1 boincer umatlas      8526 Jan 10 18:54 heartbeat.json
[2026-01-10 18:55:03] -rw-------. 1 boincer umatlas       893 Jan 10 18:55 pilotlog.txt
[2026-01-10 18:55:03] -rw-------. 1 boincer umatlas        95 Jan 10 18:55 pilot_heartbeat.json
[2026-01-10 18:55:03] -rw-------. 1 boincer umatlas    396450 Jan 10 18:55 log.47962010._002634.job.log.1
[2026-01-10 18:55:03] -rw-------. 1 boincer umatlas       353 Jan 10 18:55 output.list
[2026-01-10 18:55:03] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 18:55 boinc_mmap_file
[2026-01-10 18:55:03] -rw-r--r--. 1 boincer umatlas       620 Jan 10 18:55 runtime_log
[2026-01-10 18:55:03] -rw-------. 1 boincer umatlas   1679360 Jan 10 18:55 result.tar.gz
[2026-01-10 18:55:03] -rw-r--r--. 1 boincer umatlas        26 Jan 10 18:55 wrapper_checkpoint.txt
[2026-01-10 18:55:03] -rw-r--r--. 1 boincer umatlas      9342 Jan 10 18:55 runtime_log.err
[2026-01-10 18:55:03] -rw-------. 1 boincer umatlas       651 Jan 10 18:55 2jWNDm9Bxy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAxmKDmyrRPHo.diag
[2026-01-10 18:55:03] -rw-r--r--. 1 boincer umatlas     22381 Jan 10 18:55 stderr.txt
[2026-01-10 18:55:03] HITS file was successfully produced:
[2026-01-10 18:55:03] -rw-------. 1 boincer umatlas 45983492 Jan 10 18:53 shared/HITS.pool.root.1
[2026-01-10 18:55:03]  *** Contents of shared directory: ***
[2026-01-10 18:55:03] total 429980
[2026-01-10 18:55:03] -rw-r--r--. 2 boincer umatlas 392017497 Jan 10 18:10 ATLAS.root_0
[2026-01-10 18:55:03] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 18:55:03] -rw-r--r--. 2 boincer umatlas    592614 Jan 10 18:10 input.tar.gz
[2026-01-10 18:55:03] -rw-------. 1 boincer umatlas  45983492 Jan 10 18:53 HITS.pool.root.1
[2026-01-10 18:55:03] -rw-------. 1 boincer umatlas   1679360 Jan 10 18:55 result.tar.gz
18:55:05 (3928779): run_atlas exited; CPU time 8298.773360
18:55:05 (3928779): called boinc_finish(0)

</stderr_txt>
]]>

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