Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:10:09 (329201): wrapper (7.7.26015): starting
18:10:09 (329201): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 18:10:09] Arguments: --nthreads 11
[2026-01-10 18:10:09] Threads: 11
[2026-01-10 18:10:09] Checking for CVMFS
[2026-01-10 18:10:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:10:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:10:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:10:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:10:10] 2.13.3.0 11820 24958 152808 154994 0 348 33028075 40960001 20560 16776704 0 38626196 99.777 25724373 48409 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 18:10:10] CVMFS is ok
[2026-01-10 18:10:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:10:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:10:10] Further information can be found at the LHC@home message board.
[2026-01-10 18:10:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:10:10] Checking for apptainer binary...
[2026-01-10 18:10:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:10:10] Running /usr/bin/apptainer --version
[2026-01-10 18:10:10] apptainer version 1.4.5-2.el9
[2026-01-10 18:10:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:10:11] c-212-10.aglt2.org
[2026-01-10 18:10:11] apptainer works
[2026-01-10 18:10:11] Set ATHENA_PROC_NUMBER=11
[2026-01-10 18:10:11] Set ATHENA_CORE_NUMBER=11
[2026-01-10 18:10:11] Starting ATLAS job with PandaID=6965803388
[2026-01-10 18:10:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:52:07]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:52:07] 2026-01-11 00:50:43,291 | INFO     | stage-out finished correctly
[2026-01-10 19:52:07] 2026-01-11 00:50:43,690 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 19:52:07] 2026-01-11 00:50:43,901 | INFO     | job 6965803388 has state=finished
[2026-01-10 19:52:07] 2026-01-11 00:50:43,901 | INFO     | preparing for final server update for job 6965803388 in state='finished'
[2026-01-10 19:52:07] 2026-01-11 00:50:44,082 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-10 19:52:07] 2026-01-11 00:50:44,083 | INFO     | this job has now completed (state=finished)
[2026-01-10 19:52:07] 2026-01-11 00:50:44,083 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 19:52:07] 2026-01-11 00:50:44,083 | INFO     | log transfer has been attempted: DONE
[2026-01-10 19:52:07] 2026-01-11 00:50:44,114 | INFO     | job 6965803388 has finished - writing final server update
[2026-01-10 19:52:07] 2026-01-11 00:50:44,114 | INFO     | total number of processed events: 50 (read)
[2026-01-10 19:52:07] 2026-01-11 00:50:44,118 | INFO     | executing command: lscpu
[2026-01-10 19:52:07] 2026-01-11 00:50:44,508 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 19:52:07] 2026-01-11 00:50:44,534 | INFO     | PID=333910 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:52:07] 2026-01-11 00:50:44,535 | INFO     | .. there are 15 such processes running
[2026-01-10 19:52:07] 2026-01-11 00:50:44,742 | INFO     | monitor loop #408: job 0:6965803388 is in state 'finished'
[2026-01-10 19:52:07] 2026-01-11 00:50:44,742 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:52:07] 2026-01-11 00:50:45,538 | INFO     | time since job start (5994s) is within the limit (349056.0s)
[2026-01-10 19:52:07] 2026-01-11 00:50:47,247 | INFO     | monitor loop #409: job 0:6965803388 is in state 'finished'
[2026-01-10 19:52:07] 2026-01-11 00:50:47,247 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:52:07] 2026-01-11 00:50:47,544 | INFO     | time since job start (5996s) is within the limit (349056.0s)
[2026-01-10 19:52:07] 2026-01-11 00:50:49,555 | INFO     | time since job start (5998s) is within the limit (349056.0s)
[2026-01-10 19:52:07] 2026-01-11 00:50:49,757 | INFO     | monitor loop #410: job 0:6965803388 is in state 'finished'
[2026-01-10 19:52:07] 2026-01-11 00:50:49,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:52:07] 2026-01-11 00:50:51,567 | INFO     | time since job start (6000s) is within the limit (349056.0s)
[2026-01-10 19:52:07] 2026-01-11 00:50:52,267 | INFO     | monitor loop #411: job 0:6965803388 is in state 'finished'
[2026-01-10 19:52:07] 2026-01-11 00:50:52,267 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:52:07] 2026-01-11 00:50:53,574 | INFO     | time since job start (6002s) is within the limit (349056.0s)
[2026-01-10 19:52:07] 2026-01-11 00:50:54,776 | INFO     | monitor loop #412: job 0:6965803388 is in state 'finished'
[2026-01-10 19:52:07] 2026-01-11 00:50:54,776 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:52:07] 2026-01-11 00:50:55,581 | INFO     | time since job start (6004s) is within the limit (349056.0s)
[2026-01-10 19:52:07] 2026-01-11 00:50:57,281 | INFO     | monitor loop #413: job 0:6965803388 is in state 'finished'
[2026-01-10 19:52:07] 2026-01-11 00:50:57,281 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:52:07] 2026-01-11 00:50:57,588 | INFO     | time since job start (6006s) is within the limit (349056.0s)
[2026-01-10 19:52:07] 2026-01-11 00:50:59,598 | INFO     | time since job start (6008s) is within the limit (349056.0s)
[2026-01-10 19:52:07] 2026-01-11 00:50:59,786 | INFO     | monitor loop #414: job 0:6965803388 is in state 'finished'
[2026-01-10 19:52:07] 2026-01-11 00:50:59,786 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:52:07] 2026-01-11 00:51:01,608 | INFO     | time since job start (6010s) is within the limit (349056.0s)
[2026-01-10 19:52:07] 2026-01-11 00:51:02,295 | INFO     | monitor loop #415: job 0:6965803388 is in state 'finished'
[2026-01-10 19:52:07] 2026-01-11 00:51:02,295 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:52:07] 2026-01-11 00:51:03,616 | INFO     | time since job start (6012s) is within the limit (349056.0s)
[2026-01-10 19:52:07] 2026-01-11 00:51:03,849 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 19:52:07] 2026-01-11 00:51:03,877 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3140.040739583332
[2026-01-10 19:52:07] 2026-01-11 00:51:03,892 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965803388/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:52:07] 2026-01-11 00:51:03,893 | INFO     | extracted standard info from prmon json
[2026-01-10 19:52:07] 2026-01-11 00:51:03,893 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:52:07] 2026-01-11 00:51:03,893 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:52:07] 2026-01-11 00:51:03,895 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:52:07] 2026-01-11 00:51:03,895 | INFO     | sum of square deviations: 218476502.4044942
[2026-01-10 19:52:07] 2026-01-11 00:51:03,895 | INFO     | sum of deviations: 18812318606.42696
[2026-01-10 19:52:07] 2026-01-11 00:51:03,896 | INFO     | mean x: 1768089772.2921348
[2026-01-10 19:52:07] 2026-01-11 00:51:03,896 | INFO     | mean y: 2548184.7528089886
[2026-01-10 19:52:07] 2026-01-11 00:51:03,896 | INFO     | intersect: -152242053660.5407
[2026-01-10 19:52:07] 2026-01-11 00:51:03,896 | INFO     | chi2: 8.93331772222337
[2026-01-10 19:52:07] 2026-01-11 00:51:03,896 | INFO     | current memory leak: 86.11 B/s (using 89 data points, chi2=8.93)
[2026-01-10 19:52:07] 2026-01-11 00:51:03,896 | INFO     | could have reported an average CPU frequency of 3183 MHz (7 samples)
[2026-01-10 19:52:07] 2026-01-11 00:51:03,896 | INFO     | ..............................
[2026-01-10 19:52:07] 2026-01-11 00:51:03,897 | INFO     | . Timing measurements:
[2026-01-10 19:52:07] 2026-01-11 00:51:03,897 | INFO     | . get job = 1 s
[2026-01-10 19:52:07] 2026-01-11 00:51:03,897 | INFO     | . initial setup = 3 s
[2026-01-10 19:52:07] 2026-01-11 00:51:03,897 | INFO     | . payload setup = 52 s
[2026-01-10 19:52:07] 2026-01-11 00:51:03,897 | INFO     | . stage-in = 0 s
[2026-01-10 19:52:07] 2026-01-11 00:51:03,897 | INFO     | . payload execution = 5885 s
[2026-01-10 19:52:07] 2026-01-11 00:51:03,897 | INFO     | . stage-out = 1 s
[2026-01-10 19:52:07] 2026-01-11 00:51:03,897 | INFO     | . log creation = 0 s
[2026-01-10 19:52:07] 2026-01-11 00:51:03,897 | INFO     | ..............................
[2026-01-10 19:52:07] 2026-01-11 00:51:04,082 | INFO     | 
[2026-01-10 19:52:07] 2026-01-11 00:51:04,083 | INFO     | job summary report
[2026-01-10 19:52:07] 2026-01-11 00:51:04,083 | INFO     | --------------------------------------------------
[2026-01-10 19:52:07] 2026-01-11 00:51:04,084 | INFO     | PanDA job id: 6965803388
[2026-01-10 19:52:07] 2026-01-11 00:51:04,084 | INFO     | task id: 47962010
[2026-01-10 19:52:07] 2026-01-11 00:51:04,084 | INFO     | errors: (none)
[2026-01-10 19:52:07] 2026-01-11 00:51:04,084 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:52:07] 2026-01-11 00:51:04,084 | INFO     | pilot state: finished 
[2026-01-10 19:52:07] 2026-01-11 00:51:04,084 | INFO     | transexitcode: 0
[2026-01-10 19:52:07] 2026-01-11 00:51:04,084 | INFO     | exeerrorcode: 0
[2026-01-10 19:52:07] 2026-01-11 00:51:04,084 | INFO     | exeerrordiag: 
[2026-01-10 19:52:07] 2026-01-11 00:51:04,084 | INFO     | exitcode: 0
[2026-01-10 19:52:07] 2026-01-11 00:51:04,109 | INFO     | exitmsg: OK
[2026-01-10 19:52:07] 2026-01-11 00:51:04,109 | INFO     | cpuconsumptiontime: 11101 s
[2026-01-10 19:52:07] 2026-01-11 00:51:04,109 | INFO     | nevents: 50
[2026-01-10 19:52:07] 2026-01-11 00:51:04,109 | INFO     | neventsw: 0
[2026-01-10 19:52:07] 2026-01-11 00:51:04,109 | INFO     | pid: 341818
[2026-01-10 19:52:07] 2026-01-11 00:51:04,110 | INFO     | pgrp: 341818
[2026-01-10 19:52:07] 2026-01-11 00:51:04,110 | INFO     | corecount: 11
[2026-01-10 19:52:07] 2026-01-11 00:51:04,110 | INFO     | event service: False
[2026-01-10 19:52:07] 2026-01-11 00:51:04,110 | INFO     | sizes: {0: 2284567, 1: 2284595, 11: 2284595, 13: 2284885, 22: 2284941, 5942: 2312506, 5943: 2312633, 5945: 2321739, 5965: 2321929}
[2026-01-10 19:52:07] 2026-01-11 00:51:04,110 | INFO     | --------------------------------------------------
[2026-01-10 19:52:07] 2026-01-11 00:51:04,110 | INFO     | 
[2026-01-10 19:52:07] 2026-01-11 00:51:04,110 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 19:52:07] 2026-01-11 00:51:04,264 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:52:07] 2026-01-11 00:51:04,264 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:52:07] 2026-01-11 00:51:04,265 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:52:07] 2026-01-11 00:51:04,265 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:52:07] 2026-01-11 00:51:04,265 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:52:07] 2026-01-11 00:51:04,265 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:52:07] 2026-01-11 00:51:04,265 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:52:07] 2026-01-11 00:51:04,265 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:52:07] 2026-01-11 00:51:04,265 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:52:07] 2026-01-11 00:51:04,265 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:52:07] 2026-01-11 00:51:04,265 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:52:07] 2026-01-11 00:51:04,265 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:52:07] 2026-01-11 00:51:04,265 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:52:07] 2026-01-11 00:51:04,265 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:52:07] 2026-01-11 00:51:04,266 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:52:07] 2026-01-11 00:51:04,266 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:52:07] 2026-01-11 00:51:04,266 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:52:07] 2026-01-11 00:51:04,266 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:52:07] 2026-01-11 00:51:04,266 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:52:07] 2026-01-11 00:51:04,266 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:52:07] 2026-01-11 00:51:04,266 | INFO     | job 6965803388 has completed (purged errors)
[2026-01-10 19:52:07] 2026-01-11 00:51:04,266 | INFO     | overall cleanup function is called
[2026-01-10 19:52:07] 2026-01-11 00:51:05,287 | INFO     | --- collectZombieJob: --- 10, [341818]
[2026-01-10 19:52:07] 2026-01-11 00:51:05,287 | INFO     | zombie collector waiting for pid 341818
[2026-01-10 19:52:07] 2026-01-11 00:51:05,287 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:52:07] 2026-01-11 00:51:05,287 | INFO     | collected zombie processes
[2026-01-10 19:52:07] 2026-01-11 00:51:05,287 | INFO     | will attempt to kill all subprocesses of pid=341818
[2026-01-10 19:52:07] 2026-01-11 00:51:06,416 | INFO     | process IDs to be killed: [341818] (in reverse order)
[2026-01-10 19:52:07] 2026-01-11 00:51:06,855 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:52:07] 2026-01-11 00:51:06,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:52:07] 2026-01-11 00:51:06,870 | INFO     | did not find any defunct processes belonging to 341818
[2026-01-10 19:52:07] 2026-01-11 00:51:06,882 | INFO     | did not find any defunct processes belonging to 341818
[2026-01-10 19:52:07] 2026-01-11 00:51:06,883 | INFO     | ready for new job
[2026-01-10 19:52:07] 2026-01-11 00:51:06,883 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:52:07] 2026-01-11 00:51:06,885 | INFO     | ***************************************
[2026-01-10 19:52:07] 2026-01-11 00:51:06,885 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:52:07] 2026-01-11 00:51:06,885 | INFO     | ***************************************
[2026-01-10 19:52:07] 2026-01-11 00:51:06,885 | INFO     | 
[2026-01-10 19:52:07] 2026-01-11 00:51:06,931 | INFO     | architecture information:
[2026-01-10 19:52:07] 2026-01-11 00:51:06,940 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:52:07] 2026-01-11 00:51:07,106 | INFO     | cat /etc/os-release:
[2026-01-10 19:52:07] NAME="CentOS Linux"
[2026-01-10 19:52:07] VERSION="7 (Core)"
[2026-01-10 19:52:07] ID="centos"
[2026-01-10 19:52:07] ID_LIKE="rhel fedora"
[2026-01-10 19:52:07] VERSION_ID="7"
[2026-01-10 19:52:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:52:07] ANSI_COLOR="0;31"
[2026-01-10 19:52:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:52:07] HOME_URL="https://www.centos.org/"
[2026-01-10 19:52:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:52:07] 
[2026-01-10 19:52:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:52:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:52:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:52:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:52:07] 
[2026-01-10 19:52:07] 2026-01-11 00:51:07,106 | INFO     | ***************************************
[2026-01-10 19:52:07] 2026-01-11 00:51:07,609 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 19:52:07] 2026-01-11 00:51:07,717 | INFO     | sufficient remaining disk space (126707826688 B)
[2026-01-10 19:52:07] 2026-01-11 00:51:07,718 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:52:07] 2026-01-11 00:51:07,718 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:52:07] 2026-01-11 00:51:07,718 | INFO     | update_server=False
[2026-01-10 19:52:07] 2026-01-11 00:51:07,718 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:52:07] 2026-01-11 00:51:07,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:52:07] 2026-01-11 00:51:07,949 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:52:07] 2026-01-11 00:51:08,319 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:52:07] 2026-01-11 00:51:08,319 | INFO     | aborting loop
[2026-01-10 19:52:07] 2026-01-11 00:51:08,724 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:52:07] 2026-01-11 00:51:08,790 | INFO     | all data control threads have been joined
[2026-01-10 19:52:07] 2026-01-11 00:51:08,994 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:52:07] 2026-01-11 00:51:09,153 | INFO     | all payload control threads have been joined
[2026-01-10 19:52:07] 2026-01-11 00:51:09,180 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:52:07] 2026-01-11 00:51:09,184 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:52:07] 2026-01-11 00:51:09,185 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:52:07] 2026-01-11 00:51:09,267 | INFO     | all job control threads have been joined
[2026-01-10 19:52:07] 2026-01-11 00:51:09,325 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:52:07] 2026-01-11 00:51:09,345 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:52:07] 2026-01-11 00:51:09,725 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:52:07] 2026-01-11 00:51:09,749 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:52:07] 2026-01-11 00:51:09,796 | INFO     | [data] control thread has finished
[2026-01-10 19:52:07] 2026-01-11 00:51:09,872 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:52:07] 2026-01-11 00:51:10,000 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:52:07] 2026-01-11 00:51:10,004 | INFO     | [job] validate thread has finished
[2026-01-10 19:52:07] 2026-01-11 00:51:10,121 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:52:07] 2026-01-11 00:51:10,159 | INFO     | [payload] control thread has finished
[2026-01-10 19:52:07] 2026-01-11 00:51:10,274 | INFO     | [job] control thread has finished
[2026-01-10 19:52:07] 2026-01-11 00:51:11,962 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:52:07] 2026-01-11 00:51:38,508 | INFO     | PID=333910 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 19:52:07] 2026-01-11 00:51:38,508 | INFO     | .. there are 15 such processes running
[2026-01-10 19:52:07] 2026-01-11 00:51:38,518 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:52:07] 2026-01-11 00:51:38,518 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:52:07] 2026-01-11 00:51:38,518 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:52:07] 2026-01-11 00:52:00,038 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:52:07] 2026-01-11 00:52:02,003 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139812937152320)>', '<ExcThread(monitor, started 139812552025856)>']
[2026-01-10 19:52:07] 2026-01-11 00:52:02,661 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:52:07] 2026-01-11 00:52:02,661 | INFO     | [monitor] control thread has ended
[2026-01-10 19:52:07] 2026-01-11 00:52:07,030 | INFO     | all workflow threads have been joined
[2026-01-10 19:52:07] 2026-01-11 00:52:07,030 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:52:07] 2026-01-11 00:52:07,031 | INFO     | traces error code: 0
[2026-01-10 19:52:07] 2026-01-11 00:52:07,031 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:52:07] 2026-01-11 00:52:07,315 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:52:07] 2026-01-11 00:52:07,324 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:52:07] 2026-01-11 00:52:07,326 [wrapper] pilotpid: 333910
[2026-01-10 19:52:07] 2026-01-11 00:52:07,328 [wrapper] Pilot exit status: 0
[2026-01-10 19:52:07] 2026-01-11 00:52:07,340 [wrapper] pandaids: 6965803388
[2026-01-10 19:52:07] 2026-01-11 00:52:07,436 [wrapper] cleanup supervisor_pilot  499110 333911
[2026-01-10 19:52:07] 2026-01-11 00:52:07,445 [wrapper] Test setup, not cleaning
[2026-01-10 19:52:07] 2026-01-11 00:52:07,458 [wrapper] apfmon messages muted
[2026-01-10 19:52:07] 2026-01-11 00:52:07,525 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:52:07] 2026-01-11 00:52:07,540 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:52:07]  *** Error codes and diagnostics ***
[2026-01-10 19:52:07]     "exeErrorCode": 0,
[2026-01-10 19:52:07]     "exeErrorDiag": "",
[2026-01-10 19:52:07]     "pilotErrorCode": 0,
[2026-01-10 19:52:07]     "pilotErrorDiag": "",
[2026-01-10 19:52:07]  *** Listing of results directory ***
[2026-01-10 19:52:07] total 432636
[2026-01-10 19:52:07] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:52:07] -rwx------. 1 boincer umatlas     36322 Jan 10 18:05 runpilot2-wrapper.sh
[2026-01-10 19:52:07] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 19:52:07] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:52:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:10 run_atlas
[2026-01-10 19:52:07] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:10 job.xml
[2026-01-10 19:52:07] -rw-r--r--. 2 boincer umatlas 391498270 Jan 10 18:10 EVNT.47962006._000035.pool.root.1
[2026-01-10 19:52:07] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:10 shared
[2026-01-10 19:52:07] -rw-r--r--. 2 boincer umatlas    592607 Jan 10 18:10 input.tar.gz
[2026-01-10 19:52:07] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 19:52:07] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:10 boinc_lockfile
[2026-01-10 19:52:07] -rw-r--r--. 1 boincer umatlas      2889 Jan 10 18:10 pandaJob.out
[2026-01-10 19:52:07] -rw-------. 1 boincer umatlas        57 Jan 10 18:10 setup.sh.local
[2026-01-10 19:52:07] -rw-------. 1 boincer umatlas    989548 Jan 10 18:10 agis_schedconf.cvmfs.json
[2026-01-10 19:52:07] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:10 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:52:07] drwx------. 5 boincer umatlas      4096 Jan 10 18:10 pilot3
[2026-01-10 19:52:07] -rw-r--r--. 1 boincer umatlas       529 Jan 10 19:34 boinc_task_state.xml
[2026-01-10 19:52:07] -rw-r--r--. 1 boincer umatlas      6956 Jan 10 19:49 init_data.xml
[2026-01-10 19:52:07] -rw-------. 1 boincer umatlas  42865688 Jan 10 19:50 HITS.47962010._002840.pool.root.1
[2026-01-10 19:52:07] -rw-------. 1 boincer umatlas      1031 Jan 10 19:50 memory_monitor_summary.json
[2026-01-10 19:52:07] -rw-------. 1 boincer umatlas   1536162 Jan 10 19:50 log.47962010._002840.job.log.tgz.1
[2026-01-10 19:52:07] -rw-------. 1 boincer umatlas      8525 Jan 10 19:51 heartbeat.json
[2026-01-10 19:52:07] -rw-------. 1 boincer umatlas        95 Jan 10 19:51 pilot_heartbeat.json
[2026-01-10 19:52:07] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 19:51 boinc_mmap_file
[2026-01-10 19:52:07] -rw-r--r--. 1 boincer umatlas        26 Jan 10 19:51 wrapper_checkpoint.txt
[2026-01-10 19:52:07] -rw-------. 1 boincer umatlas      4824 Jan 10 19:52 pilotlog.txt
[2026-01-10 19:52:07] -rw-------. 1 boincer umatlas    828427 Jan 10 19:52 log.47962010._002840.job.log.1
[2026-01-10 19:52:07] -rw-------. 1 boincer umatlas       353 Jan 10 19:52 output.list
[2026-01-10 19:52:07] -rw-r--r--. 1 boincer umatlas       620 Jan 10 19:52 runtime_log
[2026-01-10 19:52:07] -rw-------. 1 boincer umatlas   2385920 Jan 10 19:52 result.tar.gz
[2026-01-10 19:52:07] -rw-r--r--. 1 boincer umatlas      9344 Jan 10 19:52 runtime_log.err
[2026-01-10 19:52:07] -rw-------. 1 boincer umatlas       654 Jan 10 19:52 7SQLDmJCxy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHfhKDm4pUaBn.diag
[2026-01-10 19:52:07] -rw-r--r--. 1 boincer umatlas     22373 Jan 10 19:52 stderr.txt
[2026-01-10 19:52:07] HITS file was successfully produced:
[2026-01-10 19:52:07] -rw-------. 1 boincer umatlas 42865688 Jan 10 19:50 shared/HITS.pool.root.1
[2026-01-10 19:52:07]  *** Contents of shared directory: ***
[2026-01-10 19:52:07] total 427120
[2026-01-10 19:52:07] -rw-r--r--. 2 boincer umatlas 391498270 Jan 10 18:10 ATLAS.root_0
[2026-01-10 19:52:07] -rw-r--r--. 2 boincer umatlas    592607 Jan 10 18:10 input.tar.gz
[2026-01-10 19:52:07] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 19:52:07] -rw-------. 1 boincer umatlas  42865688 Jan 10 19:50 HITS.pool.root.1
[2026-01-10 19:52:07] -rw-------. 1 boincer umatlas   2385920 Jan 10 19:52 result.tar.gz
19:52:08 (329201): run_atlas exited; CPU time 11133.648973
19:52:09 (329201): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN