Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:09:53 (1625299): wrapper (7.7.26015): starting
18:09:53 (1625299): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 18:09:53] Arguments: --nthreads 8
[2026-01-10 18:09:53] Threads: 8
[2026-01-10 18:09:53] Checking for CVMFS
[2026-01-10 18:09:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:09:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:09:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:09:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:09:53] 2.10.1.0 4440 317313 161336 154994 0 88 15671151 18432001 639 130560 2 334771597 99.988 12541731 7098 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-01-10 18:09:53] CVMFS is ok
[2026-01-10 18:09:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:09:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:09:53] Further information can be found at the LHC@home message board.
[2026-01-10 18:09:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:09:53] Checking for apptainer binary...
[2026-01-10 18:09:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:09:53] Running /usr/bin/apptainer --version
[2026-01-10 18:09:54] apptainer version 1.1.9-1.el8
[2026-01-10 18:09:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:09:54] c-16-31.aglt2.org
[2026-01-10 18:09:54] apptainer works
[2026-01-10 18:09:54] Set ATHENA_PROC_NUMBER=8
[2026-01-10 18:09:54] Set ATHENA_CORE_NUMBER=8
[2026-01-10 18:09:54] Starting ATLAS job with PandaID=6965803378
[2026-01-10 18:09:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:23:16]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:23:16]  replicas=None
[2026-01-10 19:23:16]  scope=mc16_13TeV
[2026-01-10 19:23:16]  status=None
[2026-01-10 19:23:16]  status_code=0
[2026-01-10 19:23:16]  storage_token=
[2026-01-10 19:23:16]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6965803378/log.47962010._002830.job.log.tgz.1
[2026-01-10 19:23:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/d3/a3/log.47962010._002830.job.log.tgz.1
[2026-01-10 19:23:16]  workdir=None
[2026-01-10 19:23:16] ]
[2026-01-10 19:23:16] 2026-01-11 00:22:20,867 | INFO     | transferring file log.47962010._002830.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6965803378/log.47962010._002830.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 19:23:16] 2026-01-11 00:22:20,867 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6965803378/log.47962010._002830.job.log.tgz.1 /tmp/boinchome/slots/3/log.47962010._002830.job
[2026-01-10 19:23:16] 2026-01-11 00:22:20,880 | INFO     | adding to output.list: log.47962010._002830.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/d3/a3/log.47962010._002830.job.log.tgz.
[2026-01-10 19:23:16] 2026-01-11 00:22:20,881 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 19:23:16] 2026-01-11 00:22:20,881 | INFO     | summary of transferred files:
[2026-01-10 19:23:16] 2026-01-11 00:22:20,881 | INFO     |  -- lfn=log.47962010._002830.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 19:23:16] 2026-01-11 00:22:20,881 | INFO     | stage-out finished correctly
[2026-01-10 19:23:16] 2026-01-11 00:22:22,133 | INFO     | time since job start (4339s) is within the limit (349056.0s)
[2026-01-10 19:23:16] 2026-01-11 00:22:22,835 | INFO     | monitor loop #321: job 0:6965803378 is in state 'finished'
[2026-01-10 19:23:16] 2026-01-11 00:22:22,835 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:23:16] 2026-01-11 00:22:23,066 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 19:23:16] 2026-01-11 00:22:24,139 | INFO     | time since job start (4341s) is within the limit (349056.0s)
[2026-01-10 19:23:16] 2026-01-11 00:22:25,285 | INFO     | job 6965803378 has state=finished
[2026-01-10 19:23:16] 2026-01-11 00:22:25,285 | INFO     | preparing for final server update for job 6965803378 in state='finished'
[2026-01-10 19:23:16] 2026-01-11 00:22:25,286 | INFO     | this job has now completed (state=finished)
[2026-01-10 19:23:16] 2026-01-11 00:22:25,286 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 19:23:16] 2026-01-11 00:22:25,286 | INFO     | log transfer has been attempted: DONE
[2026-01-10 19:23:16] 2026-01-11 00:22:25,286 | INFO     | job 6965803378 has finished - writing final server update
[2026-01-10 19:23:16] 2026-01-11 00:22:25,286 | INFO     | total number of processed events: 50 (read)
[2026-01-10 19:23:16] 2026-01-11 00:22:25,288 | INFO     | executing command: lscpu
[2026-01-10 19:23:16] 2026-01-11 00:22:25,338 | INFO     | monitor loop #322: job 0:6965803378 is in state 'finished'
[2026-01-10 19:23:16] 2026-01-11 00:22:25,338 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:23:16] 2026-01-11 00:22:25,338 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 19:23:16] 2026-01-11 00:22:25,352 | INFO     | PID=1639439 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:23:16] 2026-01-11 00:22:25,353 | INFO     | .. there are 2 such processes running
[2026-01-10 19:23:16] 2026-01-11 00:22:26,353 | INFO     | time since job start (4343s) is within the limit (349056.0s)
[2026-01-10 19:23:16] 2026-01-11 00:22:27,841 | INFO     | monitor loop #323: job 0:6965803378 is in state 'finished'
[2026-01-10 19:23:16] 2026-01-11 00:22:27,841 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:23:16] 2026-01-11 00:22:28,359 | INFO     | time since job start (4345s) is within the limit (349056.0s)
[2026-01-10 19:23:16] 2026-01-11 00:22:28,378 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 19:23:16] 2026-01-11 00:22:28,384 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 3292.3175499999998
[2026-01-10 19:23:16] 2026-01-11 00:22:28,388 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965803378/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:23:16] 2026-01-11 00:22:28,389 | INFO     | extracted standard info from prmon json
[2026-01-10 19:23:16] 2026-01-11 00:22:28,389 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:23:16] 2026-01-11 00:22:28,389 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:23:16] 2026-01-11 00:22:28,390 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:23:16] 2026-01-11 00:22:28,391 | INFO     | sum of square deviations: 81266640.0
[2026-01-10 19:23:16] 2026-01-11 00:22:28,391 | INFO     | sum of deviations: 2489532945.5
[2026-01-10 19:23:16] 2026-01-11 00:22:28,391 | INFO     | mean x: 1768088852.5
[2026-01-10 19:23:16] 2026-01-11 00:22:28,391 | INFO     | mean y: 2541948.296875
[2026-01-10 19:23:16] 2026-01-11 00:22:28,391 | INFO     | intersect: -54161324662.52942
[2026-01-10 19:23:16] 2026-01-11 00:22:28,391 | INFO     | chi2: 0.24233589889431556
[2026-01-10 19:23:16] 2026-01-11 00:22:28,391 | INFO     | current memory leak: 30.63 B/s (using 64 data points, chi2=0.24)
[2026-01-10 19:23:16] 2026-01-11 00:22:28,392 | INFO     | could have reported an average CPU frequency of 3139 MHz (6 samples)
[2026-01-10 19:23:16] 2026-01-11 00:22:28,392 | INFO     | ..............................
[2026-01-10 19:23:16] 2026-01-11 00:22:28,392 | INFO     | . Timing measurements:
[2026-01-10 19:23:16] 2026-01-11 00:22:28,392 | INFO     | . get job = 0 s
[2026-01-10 19:23:16] 2026-01-11 00:22:28,392 | INFO     | . initial setup = 2 s
[2026-01-10 19:23:16] 2026-01-11 00:22:28,392 | INFO     | . payload setup = 4 s
[2026-01-10 19:23:16] 2026-01-11 00:22:28,392 | INFO     | . stage-in = 0 s
[2026-01-10 19:23:16] 2026-01-11 00:22:28,392 | INFO     | . payload execution = 4316 s
[2026-01-10 19:23:16] 2026-01-11 00:22:28,392 | INFO     | . stage-out = 0 s
[2026-01-10 19:23:16] 2026-01-11 00:22:28,392 | INFO     | . log creation = 0 s
[2026-01-10 19:23:16] 2026-01-11 00:22:28,392 | INFO     | ..............................
[2026-01-10 19:23:16] 2026-01-11 00:22:28,450 | INFO     | 
[2026-01-10 19:23:16] 2026-01-11 00:22:28,450 | INFO     | job summary report
[2026-01-10 19:23:16] 2026-01-11 00:22:28,451 | INFO     | --------------------------------------------------
[2026-01-10 19:23:16] 2026-01-11 00:22:28,451 | INFO     | PanDA job id: 6965803378
[2026-01-10 19:23:16] 2026-01-11 00:22:28,451 | INFO     | task id: 47962010
[2026-01-10 19:23:16] 2026-01-11 00:22:28,451 | INFO     | errors: (none)
[2026-01-10 19:23:16] 2026-01-11 00:22:28,451 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:23:16] 2026-01-11 00:22:28,451 | INFO     | pilot state: finished 
[2026-01-10 19:23:16] 2026-01-11 00:22:28,451 | INFO     | transexitcode: 0
[2026-01-10 19:23:16] 2026-01-11 00:22:28,451 | INFO     | exeerrorcode: 0
[2026-01-10 19:23:16] 2026-01-11 00:22:28,451 | INFO     | exeerrordiag: 
[2026-01-10 19:23:16] 2026-01-11 00:22:28,451 | INFO     | exitcode: 0
[2026-01-10 19:23:16] 2026-01-11 00:22:28,451 | INFO     | exitmsg: OK
[2026-01-10 19:23:16] 2026-01-11 00:22:28,451 | INFO     | cpuconsumptiontime: 29384 s
[2026-01-10 19:23:16] 2026-01-11 00:22:28,452 | INFO     | nevents: 50
[2026-01-10 19:23:16] 2026-01-11 00:22:28,452 | INFO     | neventsw: 0
[2026-01-10 19:23:16] 2026-01-11 00:22:28,452 | INFO     | pid: 1663200
[2026-01-10 19:23:16] 2026-01-11 00:22:28,452 | INFO     | pgrp: 1663200
[2026-01-10 19:23:16] 2026-01-11 00:22:28,452 | INFO     | corecount: 8
[2026-01-10 19:23:16] 2026-01-11 00:22:28,452 | INFO     | event service: False
[2026-01-10 19:23:16] 2026-01-11 00:22:28,452 | INFO     | sizes: {0: 2284398, 1: 2284597, 4: 2284859, 11: 2284887, 4322: 2311804, 4323: 2311803, 4324: 2320981, 4326: 2321037, 4331: 2321283}
[2026-01-10 19:23:16] 2026-01-11 00:22:28,452 | INFO     | --------------------------------------------------
[2026-01-10 19:23:16] 2026-01-11 00:22:28,452 | INFO     | 
[2026-01-10 19:23:16] 2026-01-11 00:22:28,452 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 19:23:16] 2026-01-11 00:22:28,468 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:23:16] 2026-01-11 00:22:28,469 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:23:16] 2026-01-11 00:22:28,469 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:23:16] 2026-01-11 00:22:28,469 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:23:16] 2026-01-11 00:22:28,469 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:23:16] 2026-01-11 00:22:28,469 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:23:16] 2026-01-11 00:22:28,469 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:23:16] 2026-01-11 00:22:28,469 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:23:16] 2026-01-11 00:22:28,469 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:23:16] 2026-01-11 00:22:28,470 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:23:16] 2026-01-11 00:22:28,470 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:23:16] 2026-01-11 00:22:28,470 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:23:16] 2026-01-11 00:22:28,470 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:23:16] 2026-01-11 00:22:28,470 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:23:16] 2026-01-11 00:22:28,470 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:23:16] 2026-01-11 00:22:28,470 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:23:16] 2026-01-11 00:22:28,470 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:23:16] 2026-01-11 00:22:28,470 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:23:16] 2026-01-11 00:22:28,470 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:23:16] 2026-01-11 00:22:28,471 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:23:16] 2026-01-11 00:22:28,471 | INFO     | job 6965803378 has completed (purged errors)
[2026-01-10 19:23:16] 2026-01-11 00:22:28,471 | INFO     | overall cleanup function is called
[2026-01-10 19:23:16] 2026-01-11 00:22:29,483 | INFO     | --- collectZombieJob: --- 10, [1663200]
[2026-01-10 19:23:16] 2026-01-11 00:22:29,483 | INFO     | zombie collector waiting for pid 1663200
[2026-01-10 19:23:16] 2026-01-11 00:22:29,484 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:23:16] 2026-01-11 00:22:29,484 | INFO     | collected zombie processes
[2026-01-10 19:23:16] 2026-01-11 00:22:29,484 | INFO     | will attempt to kill all subprocesses of pid=1663200
[2026-01-10 19:23:16] 2026-01-11 00:22:29,633 | INFO     | process IDs to be killed: [1663200] (in reverse order)
[2026-01-10 19:23:16] 2026-01-11 00:22:29,691 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:23:16] 2026-01-11 00:22:29,691 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:23:16] 2026-01-11 00:22:29,699 | INFO     | did not find any defunct processes belonging to 1663200
[2026-01-10 19:23:16] 2026-01-11 00:22:29,705 | INFO     | did not find any defunct processes belonging to 1663200
[2026-01-10 19:23:16] 2026-01-11 00:22:29,705 | INFO     | ready for new job
[2026-01-10 19:23:16] 2026-01-11 00:22:29,705 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:23:16] 2026-01-11 00:22:29,707 | INFO     | ***************************************
[2026-01-10 19:23:16] 2026-01-11 00:22:29,707 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:23:16] 2026-01-11 00:22:29,707 | INFO     | ***************************************
[2026-01-10 19:23:16] 2026-01-11 00:22:29,707 | INFO     | 
[2026-01-10 19:23:16] 2026-01-11 00:22:29,720 | INFO     | architecture information:
[2026-01-10 19:23:16] 2026-01-11 00:22:29,720 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:23:16] 2026-01-11 00:22:29,730 | INFO     | cat /etc/os-release:
[2026-01-10 19:23:16] NAME="CentOS Linux"
[2026-01-10 19:23:16] VERSION="7 (Core)"
[2026-01-10 19:23:16] ID="centos"
[2026-01-10 19:23:16] ID_LIKE="rhel fedora"
[2026-01-10 19:23:16] VERSION_ID="7"
[2026-01-10 19:23:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:23:16] ANSI_COLOR="0;31"
[2026-01-10 19:23:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:23:16] HOME_URL="https://www.centos.org/"
[2026-01-10 19:23:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:23:16] 
[2026-01-10 19:23:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:23:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:23:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:23:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:23:16] 
[2026-01-10 19:23:16] 2026-01-11 00:22:29,730 | INFO     | ***************************************
[2026-01-10 19:23:16] 2026-01-11 00:22:30,233 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 19:23:16] 2026-01-11 00:22:30,241 | INFO     | sufficient remaining disk space (104518909952 B)
[2026-01-10 19:23:16] 2026-01-11 00:22:30,242 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:23:16] 2026-01-11 00:22:30,242 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:23:16] 2026-01-11 00:22:30,242 | INFO     | update_server=False
[2026-01-10 19:23:16] 2026-01-11 00:22:30,242 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:23:16] 2026-01-11 00:22:30,242 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:23:16] 2026-01-11 00:22:30,242 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-10 19:23:16] 2026-01-11 00:22:30,243 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:23:16] 2026-01-11 00:22:30,243 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:23:16] 2026-01-11 00:22:30,243 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:23:16] 2026-01-11 00:22:30,344 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 19:23:16] 2026-01-11 00:22:30,344 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 19:23:16] 2026-01-11 00:22:30,344 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:23:16] 2026-01-11 00:22:30,344 | INFO     | will abort loop
[2026-01-10 19:23:16] 2026-01-11 00:22:30,669 | INFO     | all data control threads have been joined
[2026-01-10 19:23:16] 2026-01-11 00:22:30,851 | INFO     | all payload control threads have been joined
[2026-01-10 19:23:16] 2026-01-11 00:22:31,247 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:23:16] 2026-01-11 00:22:31,248 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:23:16] 2026-01-11 00:22:31,350 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:23:16] 2026-01-11 00:22:31,462 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:23:16] 2026-01-11 00:22:31,561 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:23:16] 2026-01-11 00:22:31,674 | INFO     | [data] control thread has finished
[2026-01-10 19:23:16] 2026-01-11 00:22:31,856 | INFO     | [payload] control thread has finished
[2026-01-10 19:23:16] 2026-01-11 00:22:31,874 | INFO     | all job control threads have been joined
[2026-01-10 19:23:16] 2026-01-11 00:22:31,969 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:23:16] 2026-01-11 00:22:32,041 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:23:16] 2026-01-11 00:22:32,322 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:23:16] 2026-01-11 00:22:32,371 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:23:16] 2026-01-11 00:22:32,425 | INFO     | [job] validate thread has finished
[2026-01-10 19:23:16] 2026-01-11 00:22:32,479 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:23:16] 2026-01-11 00:22:32,879 | INFO     | [job] control thread has finished
[2026-01-10 19:23:16] 2026-01-11 00:22:33,467 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:23:16] 2026-01-11 00:22:33,630 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:23:16] 2026-01-11 00:22:37,636 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:23:16] 2026-01-11 00:22:40,533 | INFO     | job.realtimelogging is not enabled
[2026-01-10 19:23:16] 2026-01-11 00:22:41,538 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:23:16] 2026-01-11 00:23:09,947 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:23:16] 2026-01-11 00:23:11,337 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140553477355328)>', '<ExcThread(monitor, started 140553031231232)>']
[2026-01-10 19:23:16] 2026-01-11 00:23:11,445 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:23:16] 2026-01-11 00:23:11,445 | INFO     | [monitor] control thread has ended
[2026-01-10 19:23:16] 2026-01-11 00:23:16,362 | INFO     | all workflow threads have been joined
[2026-01-10 19:23:16] 2026-01-11 00:23:16,362 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:23:16] 2026-01-11 00:23:16,363 | INFO     | traces error code: 0
[2026-01-10 19:23:16] 2026-01-11 00:23:16,363 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:23:16] 2026-01-11 00:23:16,426 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:23:16] 2026-01-11 00:23:16,428 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:23:16] 2026-01-11 00:23:16,431 [wrapper] pilotpid: 1639439
[2026-01-10 19:23:16] 2026-01-11 00:23:16,433 [wrapper] Pilot exit status: 0
[2026-01-10 19:23:16] 2026-01-11 00:23:16,440 [wrapper] pandaids: 6965803378
[2026-01-10 19:23:16] 2026-01-11 00:23:16,484 [wrapper] cleanup supervisor_pilot 2603456 1639440
[2026-01-10 19:23:16] 2026-01-11 00:23:16,487 [wrapper] Test setup, not cleaning
[2026-01-10 19:23:16] 2026-01-11 00:23:16,489 [wrapper] apfmon messages muted
[2026-01-10 19:23:16] 2026-01-11 00:23:16,491 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:23:16] 2026-01-11 00:23:16,493 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:23:16]  *** Error codes and diagnostics ***
[2026-01-10 19:23:16]     "exeErrorCode": 0,
[2026-01-10 19:23:16]     "exeErrorDiag": "",
[2026-01-10 19:23:16]     "pilotErrorCode": 0,
[2026-01-10 19:23:16]     "pilotErrorDiag": "",
[2026-01-10 19:23:16]  *** Listing of results directory ***
[2026-01-10 19:23:16] total 439392
[2026-01-10 19:23:16] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:23:16] -rwx------ 1 boincer umatlas     36322 Jan 10 18:05 runpilot2-wrapper.sh
[2026-01-10 19:23:16] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 19:23:16] -rw-r--r-- 1 boincer umatlas       100 Jan 10 18:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:23:16] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 18:09 run_atlas
[2026-01-10 19:23:16] -rw-r--r-- 1 boincer umatlas       105 Jan 10 18:09 job.xml
[2026-01-10 19:23:16] -rw-r--r-- 2 boincer umatlas 396184497 Jan 10 18:09 EVNT.47962006._000013.pool.root.1
[2026-01-10 19:23:16] drwxrwx--x 2 boincer umatlas      4096 Jan 10 18:09 shared
[2026-01-10 19:23:16] -rw-r--r-- 2 boincer umatlas    592607 Jan 10 18:09 input.tar.gz
[2026-01-10 19:23:16] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 18:09 start_atlas.sh
[2026-01-10 19:23:16] -rw-r--r-- 1 boincer umatlas         0 Jan 10 18:09 boinc_lockfile
[2026-01-10 19:23:16] -rw-r--r-- 1 boincer umatlas      2890 Jan 10 18:09 pandaJob.out
[2026-01-10 19:23:16] -rw------- 1 boincer umatlas        57 Jan 10 18:09 setup.sh.local
[2026-01-10 19:23:16] -rw------- 1 boincer umatlas    989548 Jan 10 18:10 agis_schedconf.cvmfs.json
[2026-01-10 19:23:16] -rw------- 1 boincer umatlas   1516240 Jan 10 18:10 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:23:16] drwx------ 5 boincer umatlas      4096 Jan 10 18:10 pilot3
[2026-01-10 19:23:16] -rw-r--r-- 1 boincer umatlas       529 Jan 10 19:14 boinc_task_state.xml
[2026-01-10 19:23:16] -rw-r--r-- 1 boincer umatlas      6012 Jan 10 19:21 init_data.xml
[2026-01-10 19:23:16] -rw------- 1 boincer umatlas        95 Jan 10 19:21 pilot_heartbeat.json
[2026-01-10 19:23:16] -rw------- 1 boincer umatlas  46123026 Jan 10 19:22 HITS.47962010._002830.pool.root.1
[2026-01-10 19:23:16] -rw------- 1 boincer umatlas      1049 Jan 10 19:22 memory_monitor_summary.json
[2026-01-10 19:23:16] -rw------- 1 boincer umatlas   1197198 Jan 10 19:22 log.47962010._002830.job.log.tgz.1
[2026-01-10 19:23:16] -rw------- 1 boincer umatlas      8579 Jan 10 19:22 heartbeat.json
[2026-01-10 19:23:16] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 19:23 boinc_mmap_file
[2026-01-10 19:23:16] -rw-r--r-- 1 boincer umatlas        27 Jan 10 19:23 wrapper_checkpoint.txt
[2026-01-10 19:23:16] -rw------- 1 boincer umatlas      4811 Jan 10 19:23 pilotlog.txt
[2026-01-10 19:23:16] -rw------- 1 boincer umatlas    656663 Jan 10 19:23 log.47962010._002830.job.log.1
[2026-01-10 19:23:16] -rw------- 1 boincer umatlas       353 Jan 10 19:23 output.list
[2026-01-10 19:23:16] -rw-r--r-- 1 boincer umatlas       620 Jan 10 19:23 runtime_log
[2026-01-10 19:23:16] -rw------- 1 boincer umatlas   1873920 Jan 10 19:23 result.tar.gz
[2026-01-10 19:23:16] -rw-r--r-- 1 boincer umatlas      9337 Jan 10 19:23 runtime_log.err
[2026-01-10 19:23:16] -rw------- 1 boincer umatlas       656 Jan 10 19:23 8pJLDmJCxy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCfhKDm5fG2Dm.diag
[2026-01-10 19:23:16] -rw-r--r-- 1 boincer umatlas     21943 Jan 10 19:23 stderr.txt
[2026-01-10 19:23:16] HITS file was successfully produced:
[2026-01-10 19:23:16] -rw------- 1 boincer umatlas 46123026 Jan 10 19:22 shared/HITS.pool.root.1
[2026-01-10 19:23:16]  *** Contents of shared directory: ***
[2026-01-10 19:23:16] total 434376
[2026-01-10 19:23:16] -rw-r--r-- 2 boincer umatlas 396184497 Jan 10 18:09 ATLAS.root_0
[2026-01-10 19:23:16] -rw-r--r-- 2 boincer umatlas    592607 Jan 10 18:09 input.tar.gz
[2026-01-10 19:23:16] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 18:09 start_atlas.sh
[2026-01-10 19:23:16] -rw------- 1 boincer umatlas  46123026 Jan 10 19:22 HITS.pool.root.1
[2026-01-10 19:23:16] -rw------- 1 boincer umatlas   1873920 Jan 10 19:23 result.tar.gz
19:23:18 (1625299): run_atlas exited; CPU time 29299.057268
19:23:18 (1625299): called boinc_finish(0)

</stderr_txt>
]]>

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