Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:09:28 (1582382): wrapper (7.7.26015): starting
18:09:28 (1582382): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 18:09:28] Arguments: --nthreads 8
[2026-01-10 18:09:28] Threads: 8
[2026-01-10 18:09:28] Checking for CVMFS
[2026-01-10 18:09:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:09:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:09:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:09:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:09:28] 2.10.1.0 4440 317312 156672 154994 0 19 15671085 18432001 200 130560 2 334690853 99.988 12541725 7098 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-01-10 18:09:28] CVMFS is ok
[2026-01-10 18:09:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:09:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:09:28] Further information can be found at the LHC@home message board.
[2026-01-10 18:09:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:09:28] Checking for apptainer binary...
[2026-01-10 18:09:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:09:28] Running /usr/bin/apptainer --version
[2026-01-10 18:09:28] apptainer version 1.1.9-1.el8
[2026-01-10 18:09:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:09:29] c-16-31.aglt2.org
[2026-01-10 18:09:29] apptainer works
[2026-01-10 18:09:29] Set ATHENA_PROC_NUMBER=8
[2026-01-10 18:09:29] Set ATHENA_CORE_NUMBER=8
[2026-01-10 18:09:29] Starting ATLAS job with PandaID=6965803448
[2026-01-10 18:09:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:17:50]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:17:50]  status=None
[2026-01-10 19:17:50]  status_code=0
[2026-01-10 19:17:50]  storage_token=
[2026-01-10 19:17:50]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6965803448/log.47962010._002900.job.log.tgz.1
[2026-01-10 19:17:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/83/64/log.47962010._002900.job.log.tgz.1
[2026-01-10 19:17:50]  workdir=None
[2026-01-10 19:17:50] ]
[2026-01-10 19:17:50] 2026-01-11 00:17:09,040 | INFO     | transferring file log.47962010._002900.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6965803448/log.47962010._002900.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 19:17:50] 2026-01-11 00:17:09,040 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6965803448/log.47962010._002900.job.log.tgz.1 /tmp/boinchome/slots/2/log.47962010._002900.job
[2026-01-10 19:17:50] 2026-01-11 00:17:09,054 | INFO     | adding to output.list: log.47962010._002900.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/83/64/log.47962010._002900.job.log.tgz.
[2026-01-10 19:17:50] 2026-01-11 00:17:09,055 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 19:17:50] 2026-01-11 00:17:09,055 | INFO     | summary of transferred files:
[2026-01-10 19:17:50] 2026-01-11 00:17:09,055 | INFO     |  -- lfn=log.47962010._002900.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 19:17:50] 2026-01-11 00:17:09,055 | INFO     | stage-out finished correctly
[2026-01-10 19:17:50] 2026-01-11 00:17:09,335 | INFO     | PID=1594905 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:17:50] 2026-01-11 00:17:09,335 | INFO     | .. there are 5 such processes running
[2026-01-10 19:17:50] 2026-01-11 00:17:10,335 | INFO     | time since job start (4052s) is within the limit (349056.0s)
[2026-01-10 19:17:50] 2026-01-11 00:17:10,335 | INFO     | 4054s have passed since pilot start - server update state is 'RUNNING'
[2026-01-10 19:17:50] 2026-01-11 00:17:10,509 | WARNING  | process 1630236 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 19:17:50] 2026-01-11 00:17:10,509 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965803448/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:17:50] 2026-01-11 00:17:10,557 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 19:17:50] 2026-01-11 00:17:10,773 | INFO     | number of running child processes to parent process 1630236: 1
[2026-01-10 19:17:50] 2026-01-11 00:17:10,773 | INFO     | maximum number of monitored processes: 14
[2026-01-10 19:17:50] 2026-01-11 00:17:12,341 | INFO     | time since job start (4054s) is within the limit (349056.0s)
[2026-01-10 19:17:50] 2026-01-11 00:17:12,366 | INFO     | job 6965803448 has state=finished
[2026-01-10 19:17:50] 2026-01-11 00:17:12,366 | INFO     | preparing for final server update for job 6965803448 in state='finished'
[2026-01-10 19:17:50] 2026-01-11 00:17:12,367 | INFO     | this job has now completed (state=finished)
[2026-01-10 19:17:50] 2026-01-11 00:17:12,367 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 19:17:50] 2026-01-11 00:17:12,367 | INFO     | log transfer has been attempted: DONE
[2026-01-10 19:17:50] 2026-01-11 00:17:12,367 | INFO     | job 6965803448 has finished - writing final server update
[2026-01-10 19:17:50] 2026-01-11 00:17:12,368 | INFO     | total number of processed events: 50 (read)
[2026-01-10 19:17:50] 2026-01-11 00:17:12,369 | INFO     | executing command: lscpu
[2026-01-10 19:17:50] 2026-01-11 00:17:12,421 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 19:17:50] 2026-01-11 00:17:13,276 | INFO     | monitor loop #299: job 0:6965803448 is in state 'finished'
[2026-01-10 19:17:50] 2026-01-11 00:17:13,276 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:17:50] 2026-01-11 00:17:14,346 | INFO     | time since job start (4056s) is within the limit (349056.0s)
[2026-01-10 19:17:50] 2026-01-11 00:17:15,779 | INFO     | monitor loop #300: job 0:6965803448 is in state 'finished'
[2026-01-10 19:17:50] 2026-01-11 00:17:15,779 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:17:50] 2026-01-11 00:17:16,351 | INFO     | time since job start (4058s) is within the limit (349056.0s)
[2026-01-10 19:17:50] 2026-01-11 00:17:16,666 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 19:17:50] 2026-01-11 00:17:16,684 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 3202.1353
[2026-01-10 19:17:50] 2026-01-11 00:17:16,699 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965803448/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:17:50] 2026-01-11 00:17:16,700 | INFO     | extracted standard info from prmon json
[2026-01-10 19:17:50] 2026-01-11 00:17:16,700 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:17:50] 2026-01-11 00:17:16,700 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:17:50] 2026-01-11 00:17:16,702 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:17:50] 2026-01-11 00:17:16,702 | INFO     | sum of square deviations: 63666310.0
[2026-01-10 19:17:50] 2026-01-11 00:17:16,702 | INFO     | sum of deviations: 2852338283.9999995
[2026-01-10 19:17:50] 2026-01-11 00:17:16,702 | INFO     | mean x: 1768088674.0
[2026-01-10 19:17:50] 2026-01-11 00:17:16,702 | INFO     | mean y: 2551530.4576271186
[2026-01-10 19:17:50] 2026-01-11 00:17:16,703 | INFO     | intersect: -79210253709.18944
[2026-01-10 19:17:50] 2026-01-11 00:17:16,703 | INFO     | chi2: 0.13146547115745133
[2026-01-10 19:17:50] 2026-01-11 00:17:16,703 | INFO     | current memory leak: 44.80 B/s (using 59 data points, chi2=0.13)
[2026-01-10 19:17:50] 2026-01-11 00:17:16,703 | INFO     | could have reported an average CPU frequency of 3125 MHz (6 samples)
[2026-01-10 19:17:50] 2026-01-11 00:17:16,703 | INFO     | ..............................
[2026-01-10 19:17:50] 2026-01-11 00:17:16,703 | INFO     | . Timing measurements:
[2026-01-10 19:17:50] 2026-01-11 00:17:16,704 | INFO     | . get job = 0 s
[2026-01-10 19:17:50] 2026-01-11 00:17:16,704 | INFO     | . initial setup = 2 s
[2026-01-10 19:17:50] 2026-01-11 00:17:16,704 | INFO     | . payload setup = 4 s
[2026-01-10 19:17:50] 2026-01-11 00:17:16,704 | INFO     | . stage-in = 0 s
[2026-01-10 19:17:50] 2026-01-11 00:17:16,704 | INFO     | . payload execution = 4028 s
[2026-01-10 19:17:50] 2026-01-11 00:17:16,704 | INFO     | . stage-out = 0 s
[2026-01-10 19:17:50] 2026-01-11 00:17:16,704 | INFO     | . log creation = 0 s
[2026-01-10 19:17:50] 2026-01-11 00:17:16,704 | INFO     | ..............................
[2026-01-10 19:17:50] 2026-01-11 00:17:16,768 | INFO     | 
[2026-01-10 19:17:50] 2026-01-11 00:17:16,769 | INFO     | job summary report
[2026-01-10 19:17:50] 2026-01-11 00:17:16,769 | INFO     | --------------------------------------------------
[2026-01-10 19:17:50] 2026-01-11 00:17:16,769 | INFO     | PanDA job id: 6965803448
[2026-01-10 19:17:50] 2026-01-11 00:17:16,769 | INFO     | task id: 47962010
[2026-01-10 19:17:50] 2026-01-11 00:17:16,769 | INFO     | errors: (none)
[2026-01-10 19:17:50] 2026-01-11 00:17:16,769 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:17:50] 2026-01-11 00:17:16,769 | INFO     | pilot state: finished 
[2026-01-10 19:17:50] 2026-01-11 00:17:16,769 | INFO     | transexitcode: 0
[2026-01-10 19:17:50] 2026-01-11 00:17:16,769 | INFO     | exeerrorcode: 0
[2026-01-10 19:17:50] 2026-01-11 00:17:16,770 | INFO     | exeerrordiag: 
[2026-01-10 19:17:50] 2026-01-11 00:17:16,770 | INFO     | exitcode: 0
[2026-01-10 19:17:50] 2026-01-11 00:17:16,770 | INFO     | exitmsg: OK
[2026-01-10 19:17:50] 2026-01-11 00:17:16,770 | INFO     | cpuconsumptiontime: 29321 s
[2026-01-10 19:17:50] 2026-01-11 00:17:16,770 | INFO     | nevents: 50
[2026-01-10 19:17:50] 2026-01-11 00:17:16,770 | INFO     | neventsw: 0
[2026-01-10 19:17:50] 2026-01-11 00:17:16,770 | INFO     | pid: 1630236
[2026-01-10 19:17:50] 2026-01-11 00:17:16,770 | INFO     | pgrp: 1630236
[2026-01-10 19:17:50] 2026-01-11 00:17:16,770 | INFO     | corecount: 8
[2026-01-10 19:17:50] 2026-01-11 00:17:16,770 | INFO     | event service: False
[2026-01-10 19:17:50] 2026-01-11 00:17:16,770 | INFO     | sizes: {0: 2284400, 1: 2284599, 4: 2284861, 11: 2284889, 4036: 2311654, 4037: 2320648, 4038: 2320832, 4044: 2321078}
[2026-01-10 19:17:50] 2026-01-11 00:17:16,771 | INFO     | --------------------------------------------------
[2026-01-10 19:17:50] 2026-01-11 00:17:16,771 | INFO     | 
[2026-01-10 19:17:50] 2026-01-11 00:17:16,771 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 19:17:50] 2026-01-11 00:17:16,787 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:17:50] 2026-01-11 00:17:16,788 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:17:50] 2026-01-11 00:17:16,788 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:17:50] 2026-01-11 00:17:16,788 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:17:50] 2026-01-11 00:17:16,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:17:50] 2026-01-11 00:17:16,788 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:17:50] 2026-01-11 00:17:16,788 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:17:50] 2026-01-11 00:17:16,788 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:17:50] 2026-01-11 00:17:16,788 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:17:50] 2026-01-11 00:17:16,788 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:17:50] 2026-01-11 00:17:16,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:17:50] 2026-01-11 00:17:16,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:17:50] 2026-01-11 00:17:16,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:17:50] 2026-01-11 00:17:16,789 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:17:50] 2026-01-11 00:17:16,789 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:17:50] 2026-01-11 00:17:16,789 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:17:50] 2026-01-11 00:17:16,789 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:17:50] 2026-01-11 00:17:16,789 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:17:50] 2026-01-11 00:17:16,789 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:17:50] 2026-01-11 00:17:16,790 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:17:50] 2026-01-11 00:17:16,790 | INFO     | job 6965803448 has completed (purged errors)
[2026-01-10 19:17:50] 2026-01-11 00:17:16,790 | INFO     | overall cleanup function is called
[2026-01-10 19:17:50] 2026-01-11 00:17:17,802 | INFO     | --- collectZombieJob: --- 10, [1630236]
[2026-01-10 19:17:50] 2026-01-11 00:17:17,802 | INFO     | zombie collector waiting for pid 1630236
[2026-01-10 19:17:50] 2026-01-11 00:17:17,803 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:17:50] 2026-01-11 00:17:17,803 | INFO     | collected zombie processes
[2026-01-10 19:17:50] 2026-01-11 00:17:17,803 | INFO     | will attempt to kill all subprocesses of pid=1630236
[2026-01-10 19:17:50] 2026-01-11 00:17:18,011 | INFO     | process IDs to be killed: [1630236] (in reverse order)
[2026-01-10 19:17:50] 2026-01-11 00:17:18,087 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:17:50] 2026-01-11 00:17:18,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:17:50] 2026-01-11 00:17:18,100 | INFO     | did not find any defunct processes belonging to 1630236
[2026-01-10 19:17:50] 2026-01-11 00:17:18,110 | INFO     | did not find any defunct processes belonging to 1630236
[2026-01-10 19:17:50] 2026-01-11 00:17:18,110 | INFO     | ready for new job
[2026-01-10 19:17:50] 2026-01-11 00:17:18,110 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:17:50] 2026-01-11 00:17:18,112 | INFO     | ***************************************
[2026-01-10 19:17:50] 2026-01-11 00:17:18,112 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:17:50] 2026-01-11 00:17:18,112 | INFO     | ***************************************
[2026-01-10 19:17:50] 2026-01-11 00:17:18,112 | INFO     | 
[2026-01-10 19:17:50] 2026-01-11 00:17:18,125 | INFO     | architecture information:
[2026-01-10 19:17:50] 2026-01-11 00:17:18,125 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:17:50] 2026-01-11 00:17:18,134 | INFO     | cat /etc/os-release:
[2026-01-10 19:17:50] NAME="CentOS Linux"
[2026-01-10 19:17:50] VERSION="7 (Core)"
[2026-01-10 19:17:50] ID="centos"
[2026-01-10 19:17:50] ID_LIKE="rhel fedora"
[2026-01-10 19:17:50] VERSION_ID="7"
[2026-01-10 19:17:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:17:50] ANSI_COLOR="0;31"
[2026-01-10 19:17:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:17:50] HOME_URL="https://www.centos.org/"
[2026-01-10 19:17:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:17:50] 
[2026-01-10 19:17:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:17:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:17:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:17:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:17:50] 
[2026-01-10 19:17:50] 2026-01-11 00:17:18,135 | INFO     | ***************************************
[2026-01-10 19:17:50] 2026-01-11 00:17:18,637 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 19:17:50] 2026-01-11 00:17:18,650 | INFO     | sufficient remaining disk space (102036930560 B)
[2026-01-10 19:17:50] 2026-01-11 00:17:18,650 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:17:50] 2026-01-11 00:17:18,650 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:17:50] 2026-01-11 00:17:18,651 | INFO     | update_server=False
[2026-01-10 19:17:50] 2026-01-11 00:17:18,651 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:17:50] 2026-01-11 00:17:18,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:17:50] 2026-01-11 00:17:18,678 | INFO     | all payload control threads have been joined
[2026-01-10 19:17:50] 2026-01-11 00:17:19,287 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:17:50] 2026-01-11 00:17:19,287 | INFO     | aborting loop
[2026-01-10 19:17:50] 2026-01-11 00:17:19,500 | INFO     | all job control threads have been joined
[2026-01-10 19:17:50] 2026-01-11 00:17:19,641 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:17:50] 2026-01-11 00:17:19,656 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:17:50] 2026-01-11 00:17:19,656 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:17:50] 2026-01-11 00:17:19,683 | INFO     | [payload] control thread has finished
[2026-01-10 19:17:50] 2026-01-11 00:17:19,705 | INFO     | all data control threads have been joined
[2026-01-10 19:17:50] 2026-01-11 00:17:19,958 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:17:50] 2026-01-11 00:17:20,286 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:17:50] 2026-01-11 00:17:20,292 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:17:50] 2026-01-11 00:17:20,322 | INFO     | [job] validate thread has finished
[2026-01-10 19:17:50] 2026-01-11 00:17:20,505 | INFO     | [job] control thread has finished
[2026-01-10 19:17:50] 2026-01-11 00:17:20,710 | INFO     | [data] control thread has finished
[2026-01-10 19:17:50] 2026-01-11 00:17:20,724 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:17:50] 2026-01-11 00:17:20,867 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:17:50] 2026-01-11 00:17:21,011 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:17:50] 2026-01-11 00:17:21,091 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:17:50] 2026-01-11 00:17:21,126 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:17:50] 2026-01-11 00:17:21,646 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:17:50] 2026-01-11 00:17:25,131 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:17:50] 2026-01-11 00:17:29,395 | INFO     | job.realtimelogging is not enabled
[2026-01-10 19:17:50] 2026-01-11 00:17:30,400 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:17:50] 2026-01-11 00:17:44,686 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:17:50] 2026-01-11 00:17:45,288 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140441948419904)>', '<ExcThread(monitor, started 140441513084672)>']
[2026-01-10 19:17:50] 2026-01-11 00:17:49,684 | INFO     | PID=1594905 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:17:50] 2026-01-11 00:17:49,685 | INFO     | .. there are 5 such processes running
[2026-01-10 19:17:50] 2026-01-11 00:17:49,685 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:17:50] 2026-01-11 00:17:49,685 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:17:50] 2026-01-11 00:17:49,685 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:17:50] 2026-01-11 00:17:49,685 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:17:50] 2026-01-11 00:17:49,685 | INFO     | [monitor] control thread has ended
[2026-01-10 19:17:50] 2026-01-11 00:17:50,313 | INFO     | all workflow threads have been joined
[2026-01-10 19:17:50] 2026-01-11 00:17:50,313 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:17:50] 2026-01-11 00:17:50,314 | INFO     | traces error code: 0
[2026-01-10 19:17:50] 2026-01-11 00:17:50,314 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:17:50] 2026-01-11 00:17:50,388 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:17:50] 2026-01-11 00:17:50,390 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:17:50] 2026-01-11 00:17:50,392 [wrapper] pilotpid: 1594905
[2026-01-10 19:17:50] 2026-01-11 00:17:50,394 [wrapper] Pilot exit status: 0
[2026-01-10 19:17:50] 2026-01-11 00:17:50,402 [wrapper] pandaids: 6965803448
[2026-01-10 19:17:50] 2026-01-11 00:17:50,444 [wrapper] cleanup supervisor_pilot 2599158 1594906
[2026-01-10 19:17:50] 2026-01-11 00:17:50,446 [wrapper] Test setup, not cleaning
[2026-01-10 19:17:50] 2026-01-11 00:17:50,448 [wrapper] apfmon messages muted
[2026-01-10 19:17:50] 2026-01-11 00:17:50,450 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:17:50] 2026-01-11 00:17:50,452 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:17:50]  *** Error codes and diagnostics ***
[2026-01-10 19:17:50]     "exeErrorCode": 0,
[2026-01-10 19:17:50]     "exeErrorDiag": "",
[2026-01-10 19:17:50]     "pilotErrorCode": 0,
[2026-01-10 19:17:50]     "pilotErrorDiag": "",
[2026-01-10 19:17:50]  *** Listing of results directory ***
[2026-01-10 19:17:50] total 435504
[2026-01-10 19:17:50] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:17:50] -rwx------ 1 boincer umatlas     36322 Jan 10 18:04 runpilot2-wrapper.sh
[2026-01-10 19:17:50] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 19:17:50] -rw-r--r-- 1 boincer umatlas       100 Jan 10 18:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:17:50] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 18:09 run_atlas
[2026-01-10 19:17:50] -rw-r--r-- 1 boincer umatlas       105 Jan 10 18:09 job.xml
[2026-01-10 19:17:50] -rw-r--r-- 2 boincer umatlas 393319043 Jan 10 18:09 EVNT.47962006._000127.pool.root.1
[2026-01-10 19:17:50] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 18:09 start_atlas.sh
[2026-01-10 19:17:50] drwxrwx--x 2 boincer umatlas      4096 Jan 10 18:09 shared
[2026-01-10 19:17:50] -rw-r--r-- 2 boincer umatlas    592613 Jan 10 18:09 input.tar.gz
[2026-01-10 19:17:50] -rw-r--r-- 1 boincer umatlas         0 Jan 10 18:09 boinc_lockfile
[2026-01-10 19:17:50] -rw-r--r-- 1 boincer umatlas      2891 Jan 10 18:09 pandaJob.out
[2026-01-10 19:17:50] -rw------- 1 boincer umatlas        57 Jan 10 18:09 setup.sh.local
[2026-01-10 19:17:50] -rw------- 1 boincer umatlas    989548 Jan 10 18:09 agis_schedconf.cvmfs.json
[2026-01-10 19:17:50] -rw------- 1 boincer umatlas   1516240 Jan 10 18:09 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:17:50] drwx------ 5 boincer umatlas      4096 Jan 10 18:09 pilot3
[2026-01-10 19:17:50] -rw-r--r-- 1 boincer umatlas       529 Jan 10 19:10 boinc_task_state.xml
[2026-01-10 19:17:50] -rw-r--r-- 1 boincer umatlas      6012 Jan 10 19:13 init_data.xml
[2026-01-10 19:17:50] -rw------- 1 boincer umatlas  45089367 Jan 10 19:16 HITS.47962010._002900.pool.root.1
[2026-01-10 19:17:50] -rw------- 1 boincer umatlas      1047 Jan 10 19:17 memory_monitor_summary.json
[2026-01-10 19:17:50] -rw------- 1 boincer umatlas        95 Jan 10 19:17 pilot_heartbeat.json
[2026-01-10 19:17:50] -rw------- 1 boincer umatlas   1198001 Jan 10 19:17 log.47962010._002900.job.log.tgz.1
[2026-01-10 19:17:50] -rw------- 1 boincer umatlas      8593 Jan 10 19:17 heartbeat.json
[2026-01-10 19:17:50] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 19:17 boinc_mmap_file
[2026-01-10 19:17:50] -rw-r--r-- 1 boincer umatlas        27 Jan 10 19:17 wrapper_checkpoint.txt
[2026-01-10 19:17:50] -rw------- 1 boincer umatlas      4896 Jan 10 19:17 pilotlog.txt
[2026-01-10 19:17:50] -rw------- 1 boincer umatlas    616385 Jan 10 19:17 log.47962010._002900.job.log.1
[2026-01-10 19:17:50] -rw------- 1 boincer umatlas       353 Jan 10 19:17 output.list
[2026-01-10 19:17:50] -rw-r--r-- 1 boincer umatlas       620 Jan 10 19:17 runtime_log
[2026-01-10 19:17:50] -rw------- 1 boincer umatlas   1832960 Jan 10 19:17 result.tar.gz
[2026-01-10 19:17:50] -rw-r--r-- 1 boincer umatlas      9337 Jan 10 19:17 runtime_log.err
[2026-01-10 19:17:50] -rw------- 1 boincer umatlas       655 Jan 10 19:17 mrkLDm2Bxy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzwmKDmAdpUUo.diag
[2026-01-10 19:17:50] -rw-r--r-- 1 boincer umatlas     21061 Jan 10 19:17 stderr.txt
[2026-01-10 19:17:50] HITS file was successfully produced:
[2026-01-10 19:17:50] -rw------- 1 boincer umatlas 45089367 Jan 10 19:16 shared/HITS.pool.root.1
[2026-01-10 19:17:50]  *** Contents of shared directory: ***
[2026-01-10 19:17:50] total 430528
[2026-01-10 19:17:50] -rw-r--r-- 2 boincer umatlas 393319043 Jan 10 18:09 ATLAS.root_0
[2026-01-10 19:17:50] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 18:09 start_atlas.sh
[2026-01-10 19:17:50] -rw-r--r-- 2 boincer umatlas    592613 Jan 10 18:09 input.tar.gz
[2026-01-10 19:17:50] -rw------- 1 boincer umatlas  45089367 Jan 10 19:16 HITS.pool.root.1
[2026-01-10 19:17:50] -rw------- 1 boincer umatlas   1832960 Jan 10 19:17 result.tar.gz
19:17:52 (1582382): run_atlas exited; CPU time 29351.507657
19:17:52 (1582382): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN