Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:09:29 (30242): wrapper (7.7.26015): starting
18:09:29 (30242): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 18:09:29] Arguments: --nthreads 8
[2026-01-10 18:09:29] Threads: 8
[2026-01-10 18:09:29] Checking for CVMFS
[2026-01-10 18:09:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:09:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:09:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:09:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:09:30] 2.11.2.0 2864 144590 92024 154994 0 1 16461386 20275201 1 130560 0 42639660 99.864 8455098 37378 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 18:09:30] CVMFS is ok
[2026-01-10 18:09:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:09:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:09:30] Further information can be found at the LHC@home message board.
[2026-01-10 18:09:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:09:30] Checking for apptainer binary...
[2026-01-10 18:09:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:09:30] Running /usr/bin/apptainer --version
[2026-01-10 18:09:30] apptainer version 1.3.2-1.el7
[2026-01-10 18:09:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:09:31] c-115-17.aglt2.org
[2026-01-10 18:09:31] apptainer works
[2026-01-10 18:09:31] Set ATHENA_PROC_NUMBER=8
[2026-01-10 18:09:31] Set ATHENA_CORE_NUMBER=8
[2026-01-10 18:09:31] Starting ATLAS job with PandaID=6965803355
[2026-01-10 18:09:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:04:14]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:04:14]  lfn=log.47962010._002807.job.log.tgz.1
[2026-01-10 19:04:14]  mtime=0
[2026-01-10 19:04:14]  protocol_id=None
[2026-01-10 19:04:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 19:04:14]  replicas=None
[2026-01-10 19:04:14]  scope=mc16_13TeV
[2026-01-10 19:04:14]  status=None
[2026-01-10 19:04:14]  status_code=0
[2026-01-10 19:04:14]  storage_token=
[2026-01-10 19:04:14]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6965803355/log.47962010._002807.job.log.tgz.1
[2026-01-10 19:04:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/4e/f2/log.47962010._002807.job.log.tgz.1
[2026-01-10 19:04:14]  workdir=None
[2026-01-10 19:04:14] ]
[2026-01-10 19:04:14] 2026-01-11 00:03:33,945 | INFO     | transferring file log.47962010._002807.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6965803355/log.47962010._002807.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 19:04:14] 2026-01-11 00:03:33,945 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6965803355/log.47962010._002807.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._002807.job
[2026-01-10 19:04:14] 2026-01-11 00:03:33,971 | INFO     | adding to output.list: log.47962010._002807.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/4e/f2/log.47962010._002807.job.log.tgz.
[2026-01-10 19:04:14] 2026-01-11 00:03:33,973 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 19:04:14] 2026-01-11 00:03:33,973 | INFO     | summary of transferred files:
[2026-01-10 19:04:14] 2026-01-11 00:03:33,973 | INFO     |  -- lfn=log.47962010._002807.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 19:04:14] 2026-01-11 00:03:33,973 | INFO     | stage-out finished correctly
[2026-01-10 19:04:14] 2026-01-11 00:03:34,834 | INFO     | time since job start (3224s) is within the limit (349056.0s)
[2026-01-10 19:04:14] 2026-01-11 00:03:35,392 | INFO     | monitor loop #246: job 0:6965803355 is in state 'finished'
[2026-01-10 19:04:14] 2026-01-11 00:03:35,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:04:14] 2026-01-11 00:03:35,489 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 19:04:14] 2026-01-11 00:03:35,927 | INFO     | job 6965803355 has state=finished
[2026-01-10 19:04:14] 2026-01-11 00:03:35,927 | INFO     | preparing for final server update for job 6965803355 in state='finished'
[2026-01-10 19:04:14] 2026-01-11 00:03:35,928 | INFO     | this job has now completed (state=finished)
[2026-01-10 19:04:14] 2026-01-11 00:03:35,928 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 19:04:14] 2026-01-11 00:03:35,928 | INFO     | log transfer has been attempted: DONE
[2026-01-10 19:04:14] 2026-01-11 00:03:35,929 | INFO     | job 6965803355 has finished - writing final server update
[2026-01-10 19:04:14] 2026-01-11 00:03:35,929 | INFO     | total number of processed events: 50 (read)
[2026-01-10 19:04:14] 2026-01-11 00:03:35,930 | INFO     | executing command: lscpu
[2026-01-10 19:04:14] 2026-01-11 00:03:35,959 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 19:04:14] 2026-01-11 00:03:36,839 | INFO     | time since job start (3226s) is within the limit (349056.0s)
[2026-01-10 19:04:14] 2026-01-11 00:03:37,896 | INFO     | monitor loop #247: job 0:6965803355 is in state 'finished'
[2026-01-10 19:04:14] 2026-01-11 00:03:37,896 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:04:14] 2026-01-11 00:03:37,952 | INFO     | PID=1588 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 19:04:14] 2026-01-11 00:03:38,953 | INFO     | time since job start (3228s) is within the limit (349056.0s)
[2026-01-10 19:04:14] 2026-01-11 00:03:40,400 | INFO     | monitor loop #248: job 0:6965803355 is in state 'finished'
[2026-01-10 19:04:14] 2026-01-11 00:03:40,400 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:04:14] 2026-01-11 00:03:40,959 | INFO     | time since job start (3230s) is within the limit (349056.0s)
[2026-01-10 19:04:14] 2026-01-11 00:03:42,568 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 19:04:14] 2026-01-11 00:03:42,571 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2026-01-10 19:04:14] 2026-01-11 00:03:42,573 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965803355/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:04:14] 2026-01-11 00:03:42,574 | INFO     | extracted standard info from prmon json
[2026-01-10 19:04:14] 2026-01-11 00:03:42,574 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:04:14] 2026-01-11 00:03:42,575 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:04:14] 2026-01-11 00:03:42,576 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:04:14] 2026-01-11 00:03:42,577 | INFO     | sum of square deviations: 30164356.369565222
[2026-01-10 19:04:14] 2026-01-11 00:03:42,577 | INFO     | sum of deviations: -7652860760.456522
[2026-01-10 19:04:14] 2026-01-11 00:03:42,577 | INFO     | mean x: 1768088300.7608695
[2026-01-10 19:04:14] 2026-01-11 00:03:42,577 | INFO     | mean y: 2694204.413043478
[2026-01-10 19:04:14] 2026-01-11 00:03:42,578 | INFO     | intersect: 448576282585.9422
[2026-01-10 19:04:14] 2026-01-11 00:03:42,578 | INFO     | chi2: 0.8186316122866115
[2026-01-10 19:04:14] 2026-01-11 00:03:42,578 | INFO     | current memory leak: -253.71 B/s (using 46 data points, chi2=0.82)
[2026-01-10 19:04:14] 2026-01-11 00:03:42,578 | INFO     | could have reported an average CPU frequency of 1908 MHz (5 samples)
[2026-01-10 19:04:14] 2026-01-11 00:03:42,579 | INFO     | ..............................
[2026-01-10 19:04:14] 2026-01-11 00:03:42,579 | INFO     | . Timing measurements:
[2026-01-10 19:04:14] 2026-01-11 00:03:42,579 | INFO     | . get job = 0 s
[2026-01-10 19:04:14] 2026-01-11 00:03:42,579 | INFO     | . initial setup = 2 s
[2026-01-10 19:04:14] 2026-01-11 00:03:42,579 | INFO     | . payload setup = 10 s
[2026-01-10 19:04:14] 2026-01-11 00:03:42,579 | INFO     | . stage-in = 0 s
[2026-01-10 19:04:14] 2026-01-11 00:03:42,579 | INFO     | . payload execution = 3191 s
[2026-01-10 19:04:14] 2026-01-11 00:03:42,579 | INFO     | . stage-out = 0 s
[2026-01-10 19:04:14] 2026-01-11 00:03:42,580 | INFO     | . log creation = 0 s
[2026-01-10 19:04:14] 2026-01-11 00:03:42,580 | INFO     | ..............................
[2026-01-10 19:04:14] 2026-01-11 00:03:42,660 | INFO     | 
[2026-01-10 19:04:14] 2026-01-11 00:03:42,660 | INFO     | job summary report
[2026-01-10 19:04:14] 2026-01-11 00:03:42,660 | INFO     | --------------------------------------------------
[2026-01-10 19:04:14] 2026-01-11 00:03:42,661 | INFO     | PanDA job id: 6965803355
[2026-01-10 19:04:14] 2026-01-11 00:03:42,661 | INFO     | task id: 47962010
[2026-01-10 19:04:14] 2026-01-11 00:03:42,661 | INFO     | errors: (none)
[2026-01-10 19:04:14] 2026-01-11 00:03:42,661 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:04:14] 2026-01-11 00:03:42,661 | INFO     | pilot state: finished 
[2026-01-10 19:04:14] 2026-01-11 00:03:42,661 | INFO     | transexitcode: 0
[2026-01-10 19:04:14] 2026-01-11 00:03:42,661 | INFO     | exeerrorcode: 0
[2026-01-10 19:04:14] 2026-01-11 00:03:42,661 | INFO     | exeerrordiag: 
[2026-01-10 19:04:14] 2026-01-11 00:03:42,662 | INFO     | exitcode: 0
[2026-01-10 19:04:14] 2026-01-11 00:03:42,662 | INFO     | exitmsg: OK
[2026-01-10 19:04:14] 2026-01-11 00:03:42,662 | INFO     | cpuconsumptiontime: 19661 s
[2026-01-10 19:04:14] 2026-01-11 00:03:42,662 | INFO     | nevents: 50
[2026-01-10 19:04:14] 2026-01-11 00:03:42,662 | INFO     | neventsw: 0
[2026-01-10 19:04:14] 2026-01-11 00:03:42,662 | INFO     | pid: 8187
[2026-01-10 19:04:14] 2026-01-11 00:03:42,663 | INFO     | pgrp: 8187
[2026-01-10 19:04:14] 2026-01-11 00:03:42,663 | INFO     | corecount: 8
[2026-01-10 19:04:14] 2026-01-11 00:03:42,663 | INFO     | event service: False
[2026-01-10 19:04:14] 2026-01-11 00:03:42,663 | INFO     | sizes: {0: 2284396, 1: 2284595, 7: 2284857, 11: 2284885, 3204: 2311147, 3206: 2320141, 3208: 2320325, 3215: 2320603}
[2026-01-10 19:04:14] 2026-01-11 00:03:42,663 | INFO     | --------------------------------------------------
[2026-01-10 19:04:14] 2026-01-11 00:03:42,664 | INFO     | 
[2026-01-10 19:04:14] 2026-01-11 00:03:42,664 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 19:04:14] 2026-01-11 00:03:42,693 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:04:14] 2026-01-11 00:03:42,694 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:04:14] 2026-01-11 00:03:42,694 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:04:14] 2026-01-11 00:03:42,694 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:04:14] 2026-01-11 00:03:42,694 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:04:14] 2026-01-11 00:03:42,695 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:04:14] 2026-01-11 00:03:42,695 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:04:14] 2026-01-11 00:03:42,695 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:04:14] 2026-01-11 00:03:42,695 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:04:14] 2026-01-11 00:03:42,696 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:04:14] 2026-01-11 00:03:42,696 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:04:14] 2026-01-11 00:03:42,696 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:04:14] 2026-01-11 00:03:42,696 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:04:14] 2026-01-11 00:03:42,696 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:04:14] 2026-01-11 00:03:42,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:04:14] 2026-01-11 00:03:42,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:04:14] 2026-01-11 00:03:42,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:04:14] 2026-01-11 00:03:42,697 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:04:14] 2026-01-11 00:03:42,698 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:04:14] 2026-01-11 00:03:42,698 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:04:14] 2026-01-11 00:03:42,698 | INFO     | job 6965803355 has completed (purged errors)
[2026-01-10 19:04:14] 2026-01-11 00:03:42,698 | INFO     | overall cleanup function is called
[2026-01-10 19:04:14] 2026-01-11 00:03:43,714 | INFO     | --- collectZombieJob: --- 10, [8187]
[2026-01-10 19:04:14] 2026-01-11 00:03:43,714 | INFO     | zombie collector waiting for pid 8187
[2026-01-10 19:04:14] 2026-01-11 00:03:43,715 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:04:14] 2026-01-11 00:03:43,715 | INFO     | collected zombie processes
[2026-01-10 19:04:14] 2026-01-11 00:03:43,715 | INFO     | will attempt to kill all subprocesses of pid=8187
[2026-01-10 19:04:14] 2026-01-11 00:03:43,808 | INFO     | process IDs to be killed: [8187] (in reverse order)
[2026-01-10 19:04:14] 2026-01-11 00:03:43,860 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:04:14] 2026-01-11 00:03:43,860 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:04:14] 2026-01-11 00:03:43,866 | INFO     | did not find any defunct processes belonging to 8187
[2026-01-10 19:04:14] 2026-01-11 00:03:43,868 | INFO     | did not find any defunct processes belonging to 8187
[2026-01-10 19:04:14] 2026-01-11 00:03:43,869 | INFO     | ready for new job
[2026-01-10 19:04:14] 2026-01-11 00:03:43,869 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:04:14] 2026-01-11 00:03:43,870 | INFO     | ***************************************
[2026-01-10 19:04:14] 2026-01-11 00:03:43,870 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:04:14] 2026-01-11 00:03:43,870 | INFO     | ***************************************
[2026-01-10 19:04:14] 2026-01-11 00:03:43,871 | INFO     | 
[2026-01-10 19:04:14] 2026-01-11 00:03:43,871 | INFO     | architecture information:
[2026-01-10 19:04:14] 2026-01-11 00:03:43,872 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:04:14] 2026-01-11 00:03:43,891 | INFO     | cat /etc/os-release:
[2026-01-10 19:04:14] NAME="CentOS Linux"
[2026-01-10 19:04:14] VERSION="7 (Core)"
[2026-01-10 19:04:14] ID="centos"
[2026-01-10 19:04:14] ID_LIKE="rhel fedora"
[2026-01-10 19:04:14] VERSION_ID="7"
[2026-01-10 19:04:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:04:14] ANSI_COLOR="0;31"
[2026-01-10 19:04:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:04:14] HOME_URL="https://www.centos.org/"
[2026-01-10 19:04:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:04:14] 
[2026-01-10 19:04:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:04:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:04:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:04:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:04:14] 
[2026-01-10 19:04:14] 2026-01-11 00:03:43,892 | INFO     | ***************************************
[2026-01-10 19:04:14] 2026-01-11 00:03:44,395 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 19:04:14] 2026-01-11 00:03:44,416 | INFO     | sufficient remaining disk space (18375245824 B)
[2026-01-10 19:04:14] 2026-01-11 00:03:44,416 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:04:14] 2026-01-11 00:03:44,417 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:04:14] 2026-01-11 00:03:44,417 | INFO     | update_server=False
[2026-01-10 19:04:14] 2026-01-11 00:03:44,417 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:04:14] 2026-01-11 00:03:44,417 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:04:14] 2026-01-11 00:03:44,418 | INFO     | aborting loop
[2026-01-10 19:04:14] 2026-01-11 00:03:44,418 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:04:14] 2026-01-11 00:03:44,577 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:04:14] 2026-01-11 00:03:45,337 | INFO     | all job control threads have been joined
[2026-01-10 19:04:14] 2026-01-11 00:03:45,419 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:04:14] 2026-01-11 00:03:45,422 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:04:14] 2026-01-11 00:03:45,423 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:04:14] 2026-01-11 00:03:45,489 | INFO     | all data control threads have been joined
[2026-01-10 19:04:14] 2026-01-11 00:03:45,694 | INFO     | all payload control threads have been joined
[2026-01-10 19:04:14] 2026-01-11 00:03:45,756 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:04:14] 2026-01-11 00:03:45,933 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:04:14] 2026-01-11 00:03:45,940 | INFO     | [job] validate thread has finished
[2026-01-10 19:04:14] 2026-01-11 00:03:46,075 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:04:14] 2026-01-11 00:03:46,253 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:04:14] 2026-01-11 00:03:46,256 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:04:14] 2026-01-11 00:03:46,297 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:04:14] 2026-01-11 00:03:46,343 | INFO     | [job] control thread has finished
[2026-01-10 19:04:14] 2026-01-11 00:03:46,404 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:04:14] 2026-01-11 00:03:46,495 | INFO     | [data] control thread has finished
[2026-01-10 19:04:14] 2026-01-11 00:03:46,582 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:04:14] 2026-01-11 00:03:46,638 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:04:14] 2026-01-11 00:03:46,700 | INFO     | [payload] control thread has finished
[2026-01-10 19:04:14] 2026-01-11 00:03:50,081 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:04:14] 2026-01-11 00:03:54,100 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:04:14] 2026-01-11 00:03:54,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140579749160768)>', '<ExcThread(monitor, started 140579002361600)>']
[2026-01-10 19:04:14] 2026-01-11 00:03:59,599 | INFO     | all workflow threads have been joined
[2026-01-10 19:04:14] 2026-01-11 00:03:59,599 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:04:14] 2026-01-11 00:03:59,599 | INFO     | traces error code: 0
[2026-01-10 19:04:14] 2026-01-11 00:03:59,600 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:04:14] 2026-01-11 00:04:14,157 | INFO     | PID=1588 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 19:04:14] 2026-01-11 00:04:14,157 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:04:14] 2026-01-11 00:04:14,157 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:04:14] 2026-01-11 00:04:14,157 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:04:14] 2026-01-11 00:04:14,158 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:04:14] 2026-01-11 00:04:14,158 | INFO     | [monitor] control thread has ended
[2026-01-10 19:04:14] 2026-01-11 00:04:14,264 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:04:14] 2026-01-11 00:04:14,270 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:04:14] 2026-01-11 00:04:14,275 [wrapper] pilotpid: 1588
[2026-01-10 19:04:14] 2026-01-11 00:04:14,280 [wrapper] Pilot exit status: 0
[2026-01-10 19:04:14] 2026-01-11 00:04:14,305 [wrapper] pandaids: 6965803355
[2026-01-10 19:04:14] 2026-01-11 00:04:14,347 [wrapper] cleanup supervisor_pilot   819 1589
[2026-01-10 19:04:14] 2026-01-11 00:04:14,352 [wrapper] Test setup, not cleaning
[2026-01-10 19:04:14] 2026-01-11 00:04:14,357 [wrapper] apfmon messages muted
[2026-01-10 19:04:14] 2026-01-11 00:04:14,362 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:04:14] 2026-01-11 00:04:14,366 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:04:14]  *** Error codes and diagnostics ***
[2026-01-10 19:04:14]     "exeErrorCode": 0,
[2026-01-10 19:04:14]     "exeErrorDiag": "",
[2026-01-10 19:04:14]     "pilotErrorCode": 0,
[2026-01-10 19:04:14]     "pilotErrorDiag": "",
[2026-01-10 19:04:14]  *** Listing of results directory ***
[2026-01-10 19:04:14] total 430524
[2026-01-10 19:04:14] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:04:14] -rwx------ 1 boincer umatlas     36322 Jan 10 18:05 runpilot2-wrapper.sh
[2026-01-10 19:04:14] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 19:04:14] -rw-r--r-- 1 boincer umatlas       100 Jan 10 18:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:04:14] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 18:09 run_atlas
[2026-01-10 19:04:14] -rw-r--r-- 1 boincer umatlas       105 Jan 10 18:09 job.xml
[2026-01-10 19:04:14] -rw-r--r-- 2 boincer umatlas 391949667 Jan 10 18:09 EVNT.47962006._000105.pool.root.1
[2026-01-10 19:04:14] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 18:09 start_atlas.sh
[2026-01-10 19:04:14] drwxrwx--x 2 boincer umatlas      4096 Jan 10 18:09 shared
[2026-01-10 19:04:14] -rw-r--r-- 2 boincer umatlas    592610 Jan 10 18:09 input.tar.gz
[2026-01-10 19:04:14] -rw-r--r-- 1 boincer umatlas         0 Jan 10 18:09 boinc_lockfile
[2026-01-10 19:04:14] -rw-r--r-- 1 boincer umatlas      2889 Jan 10 18:09 pandaJob.out
[2026-01-10 19:04:14] -rw------- 1 boincer umatlas        57 Jan 10 18:09 setup.sh.local
[2026-01-10 19:04:14] -rw------- 1 boincer umatlas    989548 Jan 10 18:09 agis_schedconf.cvmfs.json
[2026-01-10 19:04:14] -rw------- 1 boincer umatlas   1516240 Jan 10 18:09 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:04:14] drwx------ 5 boincer umatlas      4096 Jan 10 18:09 pilot3
[2026-01-10 19:04:14] -rw-r--r-- 1 boincer umatlas       529 Jan 10 18:51 boinc_task_state.xml
[2026-01-10 19:04:14] -rw-r--r-- 1 boincer umatlas      5910 Jan 10 18:55 init_data.xml
[2026-01-10 19:04:14] -rw------- 1 boincer umatlas  41617388 Jan 10 19:03 HITS.47962010._002807.pool.root.1
[2026-01-10 19:04:14] -rw------- 1 boincer umatlas        95 Jan 10 19:03 pilot_heartbeat.json
[2026-01-10 19:04:14] -rw------- 1 boincer umatlas      1049 Jan 10 19:03 memory_monitor_summary.json
[2026-01-10 19:04:14] -rw------- 1 boincer umatlas   1191827 Jan 10 19:03 log.47962010._002807.job.log.tgz.1
[2026-01-10 19:04:14] -rw------- 1 boincer umatlas      8607 Jan 10 19:03 heartbeat.json
[2026-01-10 19:04:14] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 19:03 boinc_mmap_file
[2026-01-10 19:04:14] -rw-r--r-- 1 boincer umatlas        27 Jan 10 19:03 wrapper_checkpoint.txt
[2026-01-10 19:04:14] -rw------- 1 boincer umatlas       744 Jan 10 19:04 pilotlog.txt
[2026-01-10 19:04:14] -rw------- 1 boincer umatlas    497621 Jan 10 19:04 log.47962010._002807.job.log.1
[2026-01-10 19:04:14] -rw------- 1 boincer umatlas       353 Jan 10 19:04 output.list
[2026-01-10 19:04:14] -rw-r--r-- 1 boincer umatlas       620 Jan 10 19:04 runtime_log
[2026-01-10 19:04:14] -rw------- 1 boincer umatlas   1710080 Jan 10 19:04 result.tar.gz
[2026-01-10 19:04:14] -rw-r--r-- 1 boincer umatlas      9342 Jan 10 19:04 runtime_log.err
[2026-01-10 19:04:14] -rw------- 1 boincer umatlas       659 Jan 10 19:04 ep2KDmJCxy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0ehKDm0mEiJn.diag
[2026-01-10 19:04:14] -rw-r--r-- 1 boincer umatlas     21837 Jan 10 19:04 stderr.txt
[2026-01-10 19:04:14] HITS file was successfully produced:
[2026-01-10 19:04:14] -rw------- 1 boincer umatlas 41617388 Jan 10 19:03 shared/HITS.pool.root.1
[2026-01-10 19:04:14]  *** Contents of shared directory: ***
[2026-01-10 19:04:14] total 425676
[2026-01-10 19:04:14] -rw-r--r-- 2 boincer umatlas 391949667 Jan 10 18:09 ATLAS.root_0
[2026-01-10 19:04:14] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 18:09 start_atlas.sh
[2026-01-10 19:04:14] -rw-r--r-- 2 boincer umatlas    592610 Jan 10 18:09 input.tar.gz
[2026-01-10 19:04:14] -rw------- 1 boincer umatlas  41617388 Jan 10 19:03 HITS.pool.root.1
[2026-01-10 19:04:14] -rw------- 1 boincer umatlas   1710080 Jan 10 19:04 result.tar.gz
19:04:15 (30242): run_atlas exited; CPU time 19510.486905
19:04:15 (30242): called boinc_finish(0)

</stderr_txt>
]]>

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