Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:10:16 (9750): wrapper (7.7.26015): starting
18:10:16 (9750): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 18:10:16] Arguments: --nthreads 8
[2026-01-10 18:10:16] Threads: 8
[2026-01-10 18:10:16] Checking for CVMFS
[2026-01-10 18:10:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:10:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:10:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:10:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:10:17] 2.11.2.0 2847 138741 81080 154996 3 1 16415157 20275201 1 130560 0 37167973 99.825 9137870 26559 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 18:10:17] CVMFS is ok
[2026-01-10 18:10:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:10:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:10:17] Further information can be found at the LHC@home message board.
[2026-01-10 18:10:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:10:17] Checking for apptainer binary...
[2026-01-10 18:10:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:10:17] Running /usr/bin/apptainer --version
[2026-01-10 18:10:17] apptainer version 1.3.2-1.el7
[2026-01-10 18:10:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:10:19] c-204-19.aglt2.org
[2026-01-10 18:10:19] apptainer works
[2026-01-10 18:10:19] Set ATHENA_PROC_NUMBER=8
[2026-01-10 18:10:19] Set ATHENA_CORE_NUMBER=8
[2026-01-10 18:10:19] Starting ATLAS job with PandaID=6965803348
[2026-01-10 18:10:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:05:50]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:05:50]  protocol_id=None
[2026-01-10 19:05:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 19:05:50]  replicas=None
[2026-01-10 19:05:50]  scope=mc16_13TeV
[2026-01-10 19:05:50]  status=None
[2026-01-10 19:05:50]  status_code=0
[2026-01-10 19:05:50]  storage_token=
[2026-01-10 19:05:50]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6965803348/log.47962010._002800.job.log.tgz.1
[2026-01-10 19:05:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/f1/e4/log.47962010._002800.job.log.tgz.1
[2026-01-10 19:05:50]  workdir=None
[2026-01-10 19:05:50] ]
[2026-01-10 19:05:50] 2026-01-11 00:04:43,678 | INFO     | monitor loop #248: job 0:6965803348 is in state 'stageout'
[2026-01-10 19:05:50] 2026-01-11 00:04:43,684 | WARNING  | aborting job monitor tasks since payload process 20216 is not running
[2026-01-10 19:05:50] 2026-01-11 00:04:43,700 | INFO     | transferring file log.47962010._002800.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6965803348/log.47962010._002800.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 19:05:50] 2026-01-11 00:04:43,701 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6965803348/log.47962010._002800.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._002800.job
[2026-01-10 19:05:50] 2026-01-11 00:04:43,728 | INFO     | adding to output.list: log.47962010._002800.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/f1/e4/log.47962010._002800.job.log.tgz.
[2026-01-10 19:05:50] 2026-01-11 00:04:43,729 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 19:05:50] 2026-01-11 00:04:43,729 | INFO     | summary of transferred files:
[2026-01-10 19:05:50] 2026-01-11 00:04:43,730 | INFO     |  -- lfn=log.47962010._002800.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 19:05:50] 2026-01-11 00:04:43,730 | INFO     | stage-out finished correctly
[2026-01-10 19:05:50] 2026-01-11 00:04:43,822 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 19:05:50] 2026-01-11 00:04:45,574 | INFO     | time since job start (3246s) is within the limit (349056.0s)
[2026-01-10 19:05:50] 2026-01-11 00:04:45,584 | INFO     | job 6965803348 has state=finished
[2026-01-10 19:05:50] 2026-01-11 00:04:45,585 | INFO     | preparing for final server update for job 6965803348 in state='finished'
[2026-01-10 19:05:50] 2026-01-11 00:04:45,585 | INFO     | this job has now completed (state=finished)
[2026-01-10 19:05:50] 2026-01-11 00:04:45,586 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 19:05:50] 2026-01-11 00:04:45,586 | INFO     | log transfer has been attempted: DONE
[2026-01-10 19:05:50] 2026-01-11 00:04:45,586 | INFO     | job 6965803348 has finished - writing final server update
[2026-01-10 19:05:50] 2026-01-11 00:04:45,587 | INFO     | total number of processed events: 50 (read)
[2026-01-10 19:05:50] 2026-01-11 00:04:45,588 | INFO     | executing command: lscpu
[2026-01-10 19:05:50] 2026-01-11 00:04:45,617 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 19:05:50] 2026-01-11 00:04:46,192 | INFO     | monitor loop #249: job 0:6965803348 is in state 'finished'
[2026-01-10 19:05:50] 2026-01-11 00:04:46,193 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:05:50] 2026-01-11 00:04:47,579 | INFO     | time since job start (3248s) is within the limit (349056.0s)
[2026-01-10 19:05:50] 2026-01-11 00:04:48,696 | INFO     | monitor loop #250: job 0:6965803348 is in state 'finished'
[2026-01-10 19:05:50] 2026-01-11 00:04:48,696 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:05:50] 2026-01-11 00:04:49,584 | INFO     | time since job start (3250s) is within the limit (349056.0s)
[2026-01-10 19:05:50] 2026-01-11 00:04:51,199 | INFO     | monitor loop #251: job 0:6965803348 is in state 'finished'
[2026-01-10 19:05:50] 2026-01-11 00:04:51,199 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:05:50] 2026-01-11 00:04:51,589 | INFO     | time since job start (3252s) is within the limit (349056.0s)
[2026-01-10 19:05:50] 2026-01-11 00:04:52,305 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 19:05:50] 2026-01-11 00:04:52,309 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2026-01-10 19:05:50] 2026-01-11 00:04:52,312 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965803348/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:05:50] 2026-01-11 00:04:52,313 | INFO     | extracted standard info from prmon json
[2026-01-10 19:05:50] 2026-01-11 00:04:52,314 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:05:50] 2026-01-11 00:04:52,314 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:05:50] 2026-01-11 00:04:52,316 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:05:50] 2026-01-11 00:04:52,316 | INFO     | sum of square deviations: 30156977.6521739
[2026-01-10 19:05:50] 2026-01-11 00:04:52,317 | INFO     | sum of deviations: -1639078467.0434783
[2026-01-10 19:05:50] 2026-01-11 00:04:52,317 | INFO     | mean x: 1768088349.9130435
[2026-01-10 19:05:50] 2026-01-11 00:04:52,317 | INFO     | mean y: 2494504.2391304346
[2026-01-10 19:05:50] 2026-01-11 00:04:52,317 | INFO     | intersect: 96100836174.8938
[2026-01-10 19:05:50] 2026-01-11 00:04:52,317 | INFO     | chi2: 0.31005298095738787
[2026-01-10 19:05:50] 2026-01-11 00:04:52,317 | INFO     | current memory leak: -54.35 B/s (using 46 data points, chi2=0.31)
[2026-01-10 19:05:50] 2026-01-11 00:04:52,318 | INFO     | could have reported an average CPU frequency of 1819 MHz (5 samples)
[2026-01-10 19:05:50] 2026-01-11 00:04:52,318 | INFO     | ..............................
[2026-01-10 19:05:50] 2026-01-11 00:04:52,318 | INFO     | . Timing measurements:
[2026-01-10 19:05:50] 2026-01-11 00:04:52,318 | INFO     | . get job = 0 s
[2026-01-10 19:05:50] 2026-01-11 00:04:52,318 | INFO     | . initial setup = 3 s
[2026-01-10 19:05:50] 2026-01-11 00:04:52,318 | INFO     | . payload setup = 9 s
[2026-01-10 19:05:50] 2026-01-11 00:04:52,319 | INFO     | . stage-in = 0 s
[2026-01-10 19:05:50] 2026-01-11 00:04:52,319 | INFO     | . payload execution = 3212 s
[2026-01-10 19:05:50] 2026-01-11 00:04:52,319 | INFO     | . stage-out = 0 s
[2026-01-10 19:05:50] 2026-01-11 00:04:52,319 | INFO     | . log creation = 0 s
[2026-01-10 19:05:50] 2026-01-11 00:04:52,319 | INFO     | ..............................
[2026-01-10 19:05:50] 2026-01-11 00:04:52,604 | INFO     | 
[2026-01-10 19:05:50] 2026-01-11 00:04:52,604 | INFO     | job summary report
[2026-01-10 19:05:50] 2026-01-11 00:04:52,604 | INFO     | --------------------------------------------------
[2026-01-10 19:05:50] 2026-01-11 00:04:52,605 | INFO     | PanDA job id: 6965803348
[2026-01-10 19:05:50] 2026-01-11 00:04:52,605 | INFO     | task id: 47962010
[2026-01-10 19:05:50] 2026-01-11 00:04:52,605 | INFO     | errors: (none)
[2026-01-10 19:05:50] 2026-01-11 00:04:52,605 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:05:50] 2026-01-11 00:04:52,606 | INFO     | pilot state: finished 
[2026-01-10 19:05:50] 2026-01-11 00:04:52,606 | INFO     | transexitcode: 0
[2026-01-10 19:05:50] 2026-01-11 00:04:52,606 | INFO     | exeerrorcode: 0
[2026-01-10 19:05:50] 2026-01-11 00:04:52,607 | INFO     | exeerrordiag: 
[2026-01-10 19:05:50] 2026-01-11 00:04:52,607 | INFO     | exitcode: 0
[2026-01-10 19:05:50] 2026-01-11 00:04:52,607 | INFO     | exitmsg: OK
[2026-01-10 19:05:50] 2026-01-11 00:04:52,607 | INFO     | cpuconsumptiontime: 20825 s
[2026-01-10 19:05:50] 2026-01-11 00:04:52,607 | INFO     | nevents: 50
[2026-01-10 19:05:50] 2026-01-11 00:04:52,608 | INFO     | neventsw: 0
[2026-01-10 19:05:50] 2026-01-11 00:04:52,608 | INFO     | pid: 20216
[2026-01-10 19:05:50] 2026-01-11 00:04:52,608 | INFO     | pgrp: 20216
[2026-01-10 19:05:50] 2026-01-11 00:04:52,608 | INFO     | corecount: 8
[2026-01-10 19:05:50] 2026-01-11 00:04:52,608 | INFO     | event service: False
[2026-01-10 19:05:50] 2026-01-11 00:04:52,608 | INFO     | sizes: {0: 2284565, 7: 2284827, 11: 2284855, 3226: 2311117, 3227: 2320167, 3235: 2320389}
[2026-01-10 19:05:50] 2026-01-11 00:04:52,609 | INFO     | --------------------------------------------------
[2026-01-10 19:05:50] 2026-01-11 00:04:52,609 | INFO     | 
[2026-01-10 19:05:50] 2026-01-11 00:04:52,610 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 19:05:50] 2026-01-11 00:04:52,636 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:05:50] 2026-01-11 00:04:52,637 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:05:50] 2026-01-11 00:04:52,637 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:05:50] 2026-01-11 00:04:52,637 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:05:50] 2026-01-11 00:04:52,637 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:05:50] 2026-01-11 00:04:52,638 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:05:50] 2026-01-11 00:04:52,638 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:05:50] 2026-01-11 00:04:52,638 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:05:50] 2026-01-11 00:04:52,638 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:05:50] 2026-01-11 00:04:52,638 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:05:50] 2026-01-11 00:04:52,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:05:50] 2026-01-11 00:04:52,639 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:05:50] 2026-01-11 00:04:52,639 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:05:50] 2026-01-11 00:04:52,639 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:05:50] 2026-01-11 00:04:52,639 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:05:50] 2026-01-11 00:04:52,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:05:50] 2026-01-11 00:04:52,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:05:50] 2026-01-11 00:04:52,640 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:05:50] 2026-01-11 00:04:52,640 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:05:50] 2026-01-11 00:04:52,640 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:05:50] 2026-01-11 00:04:52,641 | INFO     | job 6965803348 has completed (purged errors)
[2026-01-10 19:05:50] 2026-01-11 00:04:52,641 | INFO     | overall cleanup function is called
[2026-01-10 19:05:50] 2026-01-11 00:04:52,733 | INFO     | PID=13730 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 19:05:50] 2026-01-11 00:04:53,660 | INFO     | --- collectZombieJob: --- 10, [20216]
[2026-01-10 19:05:50] 2026-01-11 00:04:53,660 | INFO     | zombie collector waiting for pid 20216
[2026-01-10 19:05:50] 2026-01-11 00:04:53,660 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:05:50] 2026-01-11 00:04:53,660 | INFO     | collected zombie processes
[2026-01-10 19:05:50] 2026-01-11 00:04:53,660 | INFO     | will attempt to kill all subprocesses of pid=20216
[2026-01-10 19:05:50] 2026-01-11 00:04:53,750 | INFO     | process IDs to be killed: [20216] (in reverse order)
[2026-01-10 19:05:50] 2026-01-11 00:04:53,810 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:05:50] 2026-01-11 00:04:53,810 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:05:50] 2026-01-11 00:04:53,814 | INFO     | did not find any defunct processes belonging to 20216
[2026-01-10 19:05:50] 2026-01-11 00:04:53,818 | INFO     | did not find any defunct processes belonging to 20216
[2026-01-10 19:05:50] 2026-01-11 00:04:53,818 | INFO     | ready for new job
[2026-01-10 19:05:50] 2026-01-11 00:04:53,818 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:05:50] 2026-01-11 00:04:53,820 | INFO     | ***************************************
[2026-01-10 19:05:50] 2026-01-11 00:04:53,820 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:05:50] 2026-01-11 00:04:53,820 | INFO     | ***************************************
[2026-01-10 19:05:50] 2026-01-11 00:04:53,820 | INFO     | 
[2026-01-10 19:05:50] 2026-01-11 00:04:53,821 | INFO     | architecture information:
[2026-01-10 19:05:50] 2026-01-11 00:04:53,822 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:05:50] 2026-01-11 00:04:53,840 | INFO     | cat /etc/os-release:
[2026-01-10 19:05:50] NAME="CentOS Linux"
[2026-01-10 19:05:50] VERSION="7 (Core)"
[2026-01-10 19:05:50] ID="centos"
[2026-01-10 19:05:50] ID_LIKE="rhel fedora"
[2026-01-10 19:05:50] VERSION_ID="7"
[2026-01-10 19:05:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:05:50] ANSI_COLOR="0;31"
[2026-01-10 19:05:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:05:50] HOME_URL="https://www.centos.org/"
[2026-01-10 19:05:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:05:50] 
[2026-01-10 19:05:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:05:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:05:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:05:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:05:50] 
[2026-01-10 19:05:50] 2026-01-11 00:04:53,841 | INFO     | ***************************************
[2026-01-10 19:05:50] 2026-01-11 00:04:54,344 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 19:05:50] 2026-01-11 00:04:54,363 | INFO     | sufficient remaining disk space (18341691392 B)
[2026-01-10 19:05:50] 2026-01-11 00:04:54,364 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:05:50] 2026-01-11 00:04:54,364 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:05:50] 2026-01-11 00:04:54,364 | INFO     | update_server=False
[2026-01-10 19:05:50] 2026-01-11 00:04:54,364 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:05:50] 2026-01-11 00:04:54,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:05:50] 2026-01-11 00:04:54,365 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:05:50] 2026-01-11 00:04:54,416 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:05:50] 2026-01-11 00:04:54,425 | INFO     | all job control threads have been joined
[2026-01-10 19:05:50] 2026-01-11 00:04:54,707 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:05:50] 2026-01-11 00:04:54,707 | INFO     | aborting loop
[2026-01-10 19:05:50] 2026-01-11 00:04:54,898 | INFO     | all data control threads have been joined
[2026-01-10 19:05:50] 2026-01-11 00:04:55,369 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:05:50] 2026-01-11 00:04:55,370 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:05:50] 2026-01-11 00:04:55,428 | INFO     | [job] control thread has finished
[2026-01-10 19:05:50] 2026-01-11 00:04:55,562 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:05:50] 2026-01-11 00:04:55,643 | INFO     | all payload control threads have been joined
[2026-01-10 19:05:50] 2026-01-11 00:04:55,697 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:05:50] 2026-01-11 00:04:55,713 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:05:50] 2026-01-11 00:04:55,722 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:05:50] 2026-01-11 00:04:55,878 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:05:50] 2026-01-11 00:04:55,904 | INFO     | [data] control thread has finished
[2026-01-10 19:05:50] 2026-01-11 00:04:56,145 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:05:50] 2026-01-11 00:04:56,371 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:05:50] 2026-01-11 00:04:56,516 | INFO     | [job] validate thread has finished
[2026-01-10 19:05:50] 2026-01-11 00:04:56,649 | INFO     | [payload] control thread has finished
[2026-01-10 19:05:50] 2026-01-11 00:04:56,746 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:05:50] 2026-01-11 00:04:56,765 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:05:50] 2026-01-11 00:04:58,422 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:05:50] 2026-01-11 00:05:24,933 | INFO     | PID=13730 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 19:05:50] 2026-01-11 00:05:24,934 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:05:50] 2026-01-11 00:05:24,934 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:05:50] 2026-01-11 00:05:24,934 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:05:50] 2026-01-11 00:05:44,220 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:05:50] 2026-01-11 00:05:44,734 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139887836149568)>', '<ExcThread(monitor, started 139887260976896)>']
[2026-01-10 19:05:50] 2026-01-11 00:05:45,017 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:05:50] 2026-01-11 00:05:45,017 | INFO     | [monitor] control thread has ended
[2026-01-10 19:05:50] 2026-01-11 00:05:49,749 | INFO     | all workflow threads have been joined
[2026-01-10 19:05:50] 2026-01-11 00:05:49,749 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:05:50] 2026-01-11 00:05:49,749 | INFO     | traces error code: 0
[2026-01-10 19:05:50] 2026-01-11 00:05:49,750 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:05:50] 2026-01-11 00:05:49,868 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:05:50] 2026-01-11 00:05:49,873 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:05:50] 2026-01-11 00:05:49,878 [wrapper] pilotpid: 13730
[2026-01-10 19:05:50] 2026-01-11 00:05:49,882 [wrapper] Pilot exit status: 0
[2026-01-10 19:05:50] 2026-01-11 00:05:49,900 [wrapper] pandaids: 6965803348
[2026-01-10 19:05:50] 2026-01-11 00:05:49,954 [wrapper] cleanup supervisor_pilot 11757 13731
[2026-01-10 19:05:50] 2026-01-11 00:05:49,959 [wrapper] Test setup, not cleaning
[2026-01-10 19:05:50] 2026-01-11 00:05:49,963 [wrapper] apfmon messages muted
[2026-01-10 19:05:50] 2026-01-11 00:05:49,967 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:05:50] 2026-01-11 00:05:49,971 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:05:50]  *** Error codes and diagnostics ***
[2026-01-10 19:05:50]     "exeErrorCode": 0,
[2026-01-10 19:05:50]     "exeErrorDiag": "",
[2026-01-10 19:05:50]     "pilotErrorCode": 0,
[2026-01-10 19:05:50]     "pilotErrorDiag": "",
[2026-01-10 19:05:50]  *** Listing of results directory ***
[2026-01-10 19:05:50] total 433368
[2026-01-10 19:05:50] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:05:50] -rwx------ 1 boincer umatlas     36322 Jan 10 18:05 runpilot2-wrapper.sh
[2026-01-10 19:05:50] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 19:05:50] -rw-r--r-- 1 boincer umatlas       100 Jan 10 18:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:05:50] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 18:10 run_atlas
[2026-01-10 19:05:50] -rw-r--r-- 1 boincer umatlas       105 Jan 10 18:10 job.xml
[2026-01-10 19:05:50] -rw-r--r-- 2 boincer umatlas 391949667 Jan 10 18:10 EVNT.47962006._000105.pool.root.1
[2026-01-10 19:05:50] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 19:05:50] drwxrwx--x 2 boincer umatlas      4096 Jan 10 18:10 shared
[2026-01-10 19:05:50] -rw-r--r-- 2 boincer umatlas    592605 Jan 10 18:10 input.tar.gz
[2026-01-10 19:05:50] -rw-r--r-- 1 boincer umatlas         0 Jan 10 18:10 boinc_lockfile
[2026-01-10 19:05:50] -rw-r--r-- 1 boincer umatlas      2888 Jan 10 18:10 pandaJob.out
[2026-01-10 19:05:50] -rw------- 1 boincer umatlas        57 Jan 10 18:10 setup.sh.local
[2026-01-10 19:05:50] -rw------- 1 boincer umatlas    989548 Jan 10 18:10 agis_schedconf.cvmfs.json
[2026-01-10 19:05:50] -rw------- 1 boincer umatlas   1516240 Jan 10 18:10 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:05:50] drwx------ 5 boincer umatlas      4096 Jan 10 18:10 pilot3
[2026-01-10 19:05:50] -rw-r--r-- 1 boincer umatlas       529 Jan 10 18:54 boinc_task_state.xml
[2026-01-10 19:05:50] -rw-r--r-- 1 boincer umatlas      5909 Jan 10 19:01 init_data.xml
[2026-01-10 19:05:50] -rw------- 1 boincer umatlas  44517494 Jan 10 19:04 HITS.47962010._002800.pool.root.1
[2026-01-10 19:05:50] -rw------- 1 boincer umatlas      1049 Jan 10 19:04 memory_monitor_summary.json
[2026-01-10 19:05:50] -rw------- 1 boincer umatlas   1194537 Jan 10 19:04 log.47962010._002800.job.log.tgz.1
[2026-01-10 19:05:50] -rw------- 1 boincer umatlas      8621 Jan 10 19:04 heartbeat.json
[2026-01-10 19:05:50] -rw------- 1 boincer umatlas        95 Jan 10 19:05 pilot_heartbeat.json
[2026-01-10 19:05:50] -rw-r--r-- 1 boincer umatlas        27 Jan 10 19:05 wrapper_checkpoint.txt
[2026-01-10 19:05:50] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 19:05 boinc_mmap_file
[2026-01-10 19:05:50] -rw------- 1 boincer umatlas      4746 Jan 10 19:05 pilotlog.txt
[2026-01-10 19:05:50] -rw------- 1 boincer umatlas    500650 Jan 10 19:05 log.47962010._002800.job.log.1
[2026-01-10 19:05:50] -rw------- 1 boincer umatlas       353 Jan 10 19:05 output.list
[2026-01-10 19:05:50] -rw-r--r-- 1 boincer umatlas       620 Jan 10 19:05 runtime_log
[2026-01-10 19:05:50] -rw------- 1 boincer umatlas   1710080 Jan 10 19:05 result.tar.gz
[2026-01-10 19:05:50] -rw-r--r-- 1 boincer umatlas      9342 Jan 10 19:05 runtime_log.err
[2026-01-10 19:05:50] -rw------- 1 boincer umatlas       659 Jan 10 19:05 RgxKDmJCxy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwehKDm9vm4Go.diag
[2026-01-10 19:05:50] -rw-r--r-- 1 boincer umatlas     21970 Jan 10 19:05 stderr.txt
[2026-01-10 19:05:50] HITS file was successfully produced:
[2026-01-10 19:05:50] -rw------- 1 boincer umatlas 44517494 Jan 10 19:04 shared/HITS.pool.root.1
[2026-01-10 19:05:50]  *** Contents of shared directory: ***
[2026-01-10 19:05:50] total 428508
[2026-01-10 19:05:50] -rw-r--r-- 2 boincer umatlas 391949667 Jan 10 18:10 ATLAS.root_0
[2026-01-10 19:05:50] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 19:05:50] -rw-r--r-- 2 boincer umatlas    592605 Jan 10 18:10 input.tar.gz
[2026-01-10 19:05:50] -rw------- 1 boincer umatlas  44517494 Jan 10 19:04 HITS.pool.root.1
[2026-01-10 19:05:50] -rw------- 1 boincer umatlas   1710080 Jan 10 19:05 result.tar.gz
19:05:51 (9750): run_atlas exited; CPU time 20558.772253
19:05:51 (9750): called boinc_finish(0)

</stderr_txt>
]]>

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