Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:10:25 (211250): wrapper (7.7.26015): starting
18:10:25 (211250): wrapper: running run_atlas (--nthreads 10)
[2026-01-10 18:10:25] Arguments: --nthreads 10
[2026-01-10 18:10:25] Threads: 10
[2026-01-10 18:10:25] Checking for CVMFS
[2026-01-10 18:10:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:10:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:10:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:10:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:10:25] 2.13.3.0 12460 95492 216636 154996 2 67 28437098 32935937 23963 16776704 0 918411902 99.638 884301293 36112 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 18:10:25] CVMFS is ok
[2026-01-10 18:10:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:10:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:10:25] Further information can be found at the LHC@home message board.
[2026-01-10 18:10:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:10:25] Checking for apptainer binary...
[2026-01-10 18:10:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:10:25] Running /usr/bin/apptainer --version
[2026-01-10 18:10:25] apptainer version 1.4.5-2.el9
[2026-01-10 18:10:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:10:26] c7-6-31.aglt2.org
[2026-01-10 18:10:26] apptainer works
[2026-01-10 18:10:26] Set ATHENA_PROC_NUMBER=10
[2026-01-10 18:10:26] Set ATHENA_CORE_NUMBER=10
[2026-01-10 18:10:26] Starting ATLAS job with PandaID=6965803361
[2026-01-10 18:10:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:09:55]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:09:55]  scope=mc16_13TeV
[2026-01-10 19:09:55]  status=None
[2026-01-10 19:09:55]  status_code=0
[2026-01-10 19:09:55]  storage_token=
[2026-01-10 19:09:55]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6965803361/log.47962010._002813.job.log.tgz.1
[2026-01-10 19:09:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/81/ff/log.47962010._002813.job.log.tgz.1
[2026-01-10 19:09:55]  workdir=None
[2026-01-10 19:09:55] ]
[2026-01-10 19:09:55] 2026-01-11 00:09:15,002 | INFO     | transferring file log.47962010._002813.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6965803361/log.47962010._002813.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 19:09:55] 2026-01-11 00:09:15,003 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6965803361/log.47962010._002813.job.log.tgz.1 /tmp/boinchome/slots/2/log.47962010._002813.job
[2026-01-10 19:09:55] 2026-01-11 00:09:15,022 | INFO     | adding to output.list: log.47962010._002813.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/81/ff/log.47962010._002813.job.log.tgz.
[2026-01-10 19:09:55] 2026-01-11 00:09:15,022 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 19:09:55] 2026-01-11 00:09:15,022 | INFO     | summary of transferred files:
[2026-01-10 19:09:55] 2026-01-11 00:09:15,022 | INFO     |  -- lfn=log.47962010._002813.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 19:09:55] 2026-01-11 00:09:15,022 | INFO     | stage-out finished correctly
[2026-01-10 19:09:55] 2026-01-11 00:09:15,383 | WARNING  | process 249955 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 19:09:55] 2026-01-11 00:09:15,383 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965803361/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:09:55] 2026-01-11 00:09:15,589 | INFO     | time since job start (3517s) is within the limit (349056.0s)
[2026-01-10 19:09:55] 2026-01-11 00:09:15,785 | INFO     | number of running child processes to parent process 249955: 1
[2026-01-10 19:09:55] 2026-01-11 00:09:15,785 | INFO     | maximum number of monitored processes: 15
[2026-01-10 19:09:55] 2026-01-11 00:09:17,593 | INFO     | time since job start (3519s) is within the limit (349056.0s)
[2026-01-10 19:09:55] 2026-01-11 00:09:17,924 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 19:09:55] 2026-01-11 00:09:18,288 | INFO     | monitor loop #255: job 0:6965803361 is in state 'finished'
[2026-01-10 19:09:55] 2026-01-11 00:09:18,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:09:55] 2026-01-11 00:09:19,083 | INFO     | job 6965803361 has state=finished
[2026-01-10 19:09:55] 2026-01-11 00:09:19,085 | INFO     | preparing for final server update for job 6965803361 in state='finished'
[2026-01-10 19:09:55] 2026-01-11 00:09:19,085 | INFO     | this job has now completed (state=finished)
[2026-01-10 19:09:55] 2026-01-11 00:09:19,085 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 19:09:55] 2026-01-11 00:09:19,086 | INFO     | log transfer has been attempted: DONE
[2026-01-10 19:09:55] 2026-01-11 00:09:19,086 | INFO     | job 6965803361 has finished - writing final server update
[2026-01-10 19:09:55] 2026-01-11 00:09:19,086 | INFO     | total number of processed events: 50 (read)
[2026-01-10 19:09:55] 2026-01-11 00:09:19,086 | INFO     | executing command: lscpu
[2026-01-10 19:09:55] 2026-01-11 00:09:19,135 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 19:09:55] 2026-01-11 00:09:19,599 | INFO     | time since job start (3521s) is within the limit (349056.0s)
[2026-01-10 19:09:55] 2026-01-11 00:09:20,791 | INFO     | monitor loop #256: job 0:6965803361 is in state 'finished'
[2026-01-10 19:09:55] 2026-01-11 00:09:20,791 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:09:55] 2026-01-11 00:09:21,605 | INFO     | time since job start (3523s) is within the limit (349056.0s)
[2026-01-10 19:09:55] 2026-01-11 00:09:23,128 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 19:09:55] 2026-01-11 00:09:23,136 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3440.3446041666652
[2026-01-10 19:09:55] 2026-01-11 00:09:23,145 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965803361/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:09:55] 2026-01-11 00:09:23,145 | INFO     | extracted standard info from prmon json
[2026-01-10 19:09:55] 2026-01-11 00:09:23,146 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:09:55] 2026-01-11 00:09:23,146 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:09:55] 2026-01-11 00:09:23,147 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:09:55] 2026-01-11 00:09:23,147 | INFO     | sum of square deviations: 41108268.823529385
[2026-01-10 19:09:55] 2026-01-11 00:09:23,147 | INFO     | sum of deviations: 4680566713.52941
[2026-01-10 19:09:55] 2026-01-11 00:09:23,147 | INFO     | mean x: 1768088498.9411764
[2026-01-10 19:09:55] 2026-01-11 00:09:23,147 | INFO     | mean y: 2670445.843137255
[2026-01-10 19:09:55] 2026-01-11 00:09:23,147 | INFO     | intersect: -201310992511.94757
[2026-01-10 19:09:55] 2026-01-11 00:09:23,147 | INFO     | chi2: 0.20805178900095905
[2026-01-10 19:09:55] 2026-01-11 00:09:23,147 | INFO     | current memory leak: 113.86 B/s (using 51 data points, chi2=0.21)
[2026-01-10 19:09:55] 2026-01-11 00:09:23,147 | INFO     | could have reported an average CPU frequency of 3392 MHz (5 samples)
[2026-01-10 19:09:55] 2026-01-11 00:09:23,147 | INFO     | ..............................
[2026-01-10 19:09:55] 2026-01-11 00:09:23,148 | INFO     | . Timing measurements:
[2026-01-10 19:09:55] 2026-01-11 00:09:23,148 | INFO     | . get job = 0 s
[2026-01-10 19:09:55] 2026-01-11 00:09:23,148 | INFO     | . initial setup = 2 s
[2026-01-10 19:09:55] 2026-01-11 00:09:23,148 | INFO     | . payload setup = 7 s
[2026-01-10 19:09:55] 2026-01-11 00:09:23,148 | INFO     | . stage-in = 0 s
[2026-01-10 19:09:55] 2026-01-11 00:09:23,148 | INFO     | . payload execution = 3488 s
[2026-01-10 19:09:55] 2026-01-11 00:09:23,148 | INFO     | . stage-out = 0 s
[2026-01-10 19:09:55] 2026-01-11 00:09:23,148 | INFO     | . log creation = 0 s
[2026-01-10 19:09:55] 2026-01-11 00:09:23,148 | INFO     | ..............................
[2026-01-10 19:09:55] 2026-01-11 00:09:23,191 | INFO     | 
[2026-01-10 19:09:55] 2026-01-11 00:09:23,191 | INFO     | job summary report
[2026-01-10 19:09:55] 2026-01-11 00:09:23,192 | INFO     | --------------------------------------------------
[2026-01-10 19:09:55] 2026-01-11 00:09:23,192 | INFO     | PanDA job id: 6965803361
[2026-01-10 19:09:55] 2026-01-11 00:09:23,192 | INFO     | task id: 47962010
[2026-01-10 19:09:55] 2026-01-11 00:09:23,192 | INFO     | errors: (none)
[2026-01-10 19:09:55] 2026-01-11 00:09:23,192 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:09:55] 2026-01-11 00:09:23,192 | INFO     | pilot state: finished 
[2026-01-10 19:09:55] 2026-01-11 00:09:23,192 | INFO     | transexitcode: 0
[2026-01-10 19:09:55] 2026-01-11 00:09:23,192 | INFO     | exeerrorcode: 0
[2026-01-10 19:09:55] 2026-01-11 00:09:23,192 | INFO     | exeerrordiag: 
[2026-01-10 19:09:55] 2026-01-11 00:09:23,192 | INFO     | exitcode: 0
[2026-01-10 19:09:55] 2026-01-11 00:09:23,192 | INFO     | exitmsg: OK
[2026-01-10 19:09:55] 2026-01-11 00:09:23,192 | INFO     | cpuconsumptiontime: 11587 s
[2026-01-10 19:09:55] 2026-01-11 00:09:23,193 | INFO     | nevents: 50
[2026-01-10 19:09:55] 2026-01-11 00:09:23,193 | INFO     | neventsw: 0
[2026-01-10 19:09:55] 2026-01-11 00:09:23,193 | INFO     | pid: 249955
[2026-01-10 19:09:55] 2026-01-11 00:09:23,193 | INFO     | pgrp: 249955
[2026-01-10 19:09:55] 2026-01-11 00:09:23,193 | INFO     | corecount: 10
[2026-01-10 19:09:55] 2026-01-11 00:09:23,193 | INFO     | event service: False
[2026-01-10 19:09:55] 2026-01-11 00:09:23,193 | INFO     | sizes: {0: 2284567, 5: 2284829, 11: 2284885, 3499: 2311224, 3500: 2320218, 3503: 2320274, 3508: 2320680}
[2026-01-10 19:09:55] 2026-01-11 00:09:23,193 | INFO     | --------------------------------------------------
[2026-01-10 19:09:55] 2026-01-11 00:09:23,193 | INFO     | 
[2026-01-10 19:09:55] 2026-01-11 00:09:23,193 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 19:09:55] 2026-01-11 00:09:23,217 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:09:55] 2026-01-11 00:09:23,217 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:09:55] 2026-01-11 00:09:23,218 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:09:55] 2026-01-11 00:09:23,218 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:09:55] 2026-01-11 00:09:23,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:09:55] 2026-01-11 00:09:23,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:09:55] 2026-01-11 00:09:23,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:09:55] 2026-01-11 00:09:23,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:09:55] 2026-01-11 00:09:23,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:09:55] 2026-01-11 00:09:23,218 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:09:55] 2026-01-11 00:09:23,218 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:09:55] 2026-01-11 00:09:23,218 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:09:55] 2026-01-11 00:09:23,218 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:09:55] 2026-01-11 00:09:23,218 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:09:55] 2026-01-11 00:09:23,218 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:09:55] 2026-01-11 00:09:23,218 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:09:55] 2026-01-11 00:09:23,218 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:09:55] 2026-01-11 00:09:23,218 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:09:55] 2026-01-11 00:09:23,219 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:09:55] 2026-01-11 00:09:23,219 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:09:55] 2026-01-11 00:09:23,219 | INFO     | job 6965803361 has completed (purged errors)
[2026-01-10 19:09:55] 2026-01-11 00:09:23,219 | INFO     | overall cleanup function is called
[2026-01-10 19:09:55] 2026-01-11 00:09:24,234 | INFO     | --- collectZombieJob: --- 10, [249955]
[2026-01-10 19:09:55] 2026-01-11 00:09:24,234 | INFO     | zombie collector waiting for pid 249955
[2026-01-10 19:09:55] 2026-01-11 00:09:24,235 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:09:55] 2026-01-11 00:09:24,235 | INFO     | collected zombie processes
[2026-01-10 19:09:55] 2026-01-11 00:09:24,235 | INFO     | will attempt to kill all subprocesses of pid=249955
[2026-01-10 19:09:55] 2026-01-11 00:09:24,695 | INFO     | process IDs to be killed: [249955] (in reverse order)
[2026-01-10 19:09:55] 2026-01-11 00:09:24,832 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:09:55] 2026-01-11 00:09:24,832 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:09:55] 2026-01-11 00:09:24,853 | INFO     | did not find any defunct processes belonging to 249955
[2026-01-10 19:09:55] 2026-01-11 00:09:24,874 | INFO     | did not find any defunct processes belonging to 249955
[2026-01-10 19:09:55] 2026-01-11 00:09:24,874 | INFO     | ready for new job
[2026-01-10 19:09:55] 2026-01-11 00:09:24,874 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:09:55] 2026-01-11 00:09:24,876 | INFO     | ***************************************
[2026-01-10 19:09:55] 2026-01-11 00:09:24,876 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:09:55] 2026-01-11 00:09:24,876 | INFO     | ***************************************
[2026-01-10 19:09:55] 2026-01-11 00:09:24,876 | INFO     | 
[2026-01-10 19:09:55] 2026-01-11 00:09:24,880 | INFO     | architecture information:
[2026-01-10 19:09:55] 2026-01-11 00:09:24,881 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:09:55] 2026-01-11 00:09:24,897 | INFO     | cat /etc/os-release:
[2026-01-10 19:09:55] NAME="CentOS Linux"
[2026-01-10 19:09:55] VERSION="7 (Core)"
[2026-01-10 19:09:55] ID="centos"
[2026-01-10 19:09:55] ID_LIKE="rhel fedora"
[2026-01-10 19:09:55] VERSION_ID="7"
[2026-01-10 19:09:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:09:55] ANSI_COLOR="0;31"
[2026-01-10 19:09:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:09:55] HOME_URL="https://www.centos.org/"
[2026-01-10 19:09:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:09:55] 
[2026-01-10 19:09:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:09:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:09:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:09:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:09:55] 
[2026-01-10 19:09:55] 2026-01-11 00:09:24,898 | INFO     | ***************************************
[2026-01-10 19:09:55] 2026-01-11 00:09:25,400 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 19:09:55] 2026-01-11 00:09:25,421 | INFO     | sufficient remaining disk space (76385615872 B)
[2026-01-10 19:09:55] 2026-01-11 00:09:25,421 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:09:55] 2026-01-11 00:09:25,421 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:09:55] 2026-01-11 00:09:25,421 | INFO     | update_server=False
[2026-01-10 19:09:55] 2026-01-11 00:09:25,421 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:09:55] 2026-01-11 00:09:25,577 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:09:55] 2026-01-11 00:09:25,801 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 19:09:55] 2026-01-11 00:09:25,801 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 19:09:55] 2026-01-11 00:09:25,801 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:09:55] 2026-01-11 00:09:25,802 | INFO     | will abort loop
[2026-01-10 19:09:55] 2026-01-11 00:09:26,120 | INFO     | all payload control threads have been joined
[2026-01-10 19:09:55] 2026-01-11 00:09:26,293 | INFO     | all data control threads have been joined
[2026-01-10 19:09:55] 2026-01-11 00:09:26,426 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:09:55] 2026-01-11 00:09:26,429 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:09:55] 2026-01-11 00:09:26,559 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:09:55] 2026-01-11 00:09:26,605 | INFO     | all job control threads have been joined
[2026-01-10 19:09:55] 2026-01-11 00:09:26,807 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:09:55] 2026-01-11 00:09:26,960 | INFO     | [job] validate thread has finished
[2026-01-10 19:09:55] 2026-01-11 00:09:26,988 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:09:55] 2026-01-11 00:09:27,125 | INFO     | [payload] control thread has finished
[2026-01-10 19:09:55] 2026-01-11 00:09:27,279 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:09:55] 2026-01-11 00:09:27,298 | INFO     | [data] control thread has finished
[2026-01-10 19:09:55] 2026-01-11 00:09:27,477 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:09:55] 2026-01-11 00:09:27,583 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:09:55] 2026-01-11 00:09:27,610 | INFO     | [job] control thread has finished
[2026-01-10 19:09:55] 2026-01-11 00:09:27,793 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:09:55] 2026-01-11 00:09:28,201 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:09:55] 2026-01-11 00:09:28,509 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:09:55] 2026-01-11 00:09:29,207 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:09:55] 2026-01-11 00:09:32,515 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:09:55] 2026-01-11 00:09:35,883 | INFO     | job.realtimelogging is not enabled
[2026-01-10 19:09:55] 2026-01-11 00:09:36,888 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:09:55] 2026-01-11 00:09:43,962 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:09:55] 2026-01-11 00:09:44,003 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140484788762432)>', '<ExcThread(monitor, started 140484085282560)>']
[2026-01-10 19:09:55] 2026-01-11 00:09:49,028 | INFO     | all workflow threads have been joined
[2026-01-10 19:09:55] 2026-01-11 00:09:49,028 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:09:55] 2026-01-11 00:09:49,029 | INFO     | traces error code: 0
[2026-01-10 19:09:55] 2026-01-11 00:09:49,029 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:09:55] 2026-01-11 00:09:55,223 | INFO     | PID=221975 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 19:09:55] 2026-01-11 00:09:55,226 | INFO     | .. there are 25 such processes running
[2026-01-10 19:09:55] 2026-01-11 00:09:55,226 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:09:55] 2026-01-11 00:09:55,226 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:09:55] 2026-01-11 00:09:55,227 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:09:55] 2026-01-11 00:09:55,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:09:55] 2026-01-11 00:09:55,227 | INFO     | [monitor] control thread has ended
[2026-01-10 19:09:55] 2026-01-11 00:09:55,392 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:09:55] 2026-01-11 00:09:55,396 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:09:55] 2026-01-11 00:09:55,399 [wrapper] pilotpid: 221975
[2026-01-10 19:09:55] 2026-01-11 00:09:55,402 [wrapper] Pilot exit status: 0
[2026-01-10 19:09:55] 2026-01-11 00:09:55,418 [wrapper] pandaids: 6965803361
[2026-01-10 19:09:55] 2026-01-11 00:09:55,528 [wrapper] cleanup supervisor_pilot  609359 221976
[2026-01-10 19:09:55] 2026-01-11 00:09:55,531 [wrapper] Test setup, not cleaning
[2026-01-10 19:09:55] 2026-01-11 00:09:55,534 [wrapper] apfmon messages muted
[2026-01-10 19:09:55] 2026-01-11 00:09:55,539 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:09:55] 2026-01-11 00:09:55,545 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:09:55]  *** Error codes and diagnostics ***
[2026-01-10 19:09:55]     "exeErrorCode": 0,
[2026-01-10 19:09:55]     "exeErrorDiag": "",
[2026-01-10 19:09:55]     "pilotErrorCode": 0,
[2026-01-10 19:09:55]     "pilotErrorDiag": "",
[2026-01-10 19:09:55]  *** Listing of results directory ***
[2026-01-10 19:09:55] total 435344
[2026-01-10 19:09:55] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:09:55] -rwx------. 1 boincer umatlas     36322 Jan 10 18:05 runpilot2-wrapper.sh
[2026-01-10 19:09:55] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 19:09:55] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:09:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:10 run_atlas
[2026-01-10 19:09:55] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:10 job.xml
[2026-01-10 19:09:55] -rw-r--r--. 2 boincer umatlas 391949667 Jan 10 18:10 EVNT.47962006._000105.pool.root.1
[2026-01-10 19:09:55] -rw-r--r--. 2 boincer umatlas    592614 Jan 10 18:10 input.tar.gz
[2026-01-10 19:09:55] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 19:09:55] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:10 shared
[2026-01-10 19:09:55] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:10 boinc_lockfile
[2026-01-10 19:09:55] -rw-r--r--. 1 boincer umatlas      2889 Jan 10 18:10 pandaJob.out
[2026-01-10 19:09:55] -rw-------. 1 boincer umatlas        57 Jan 10 18:10 setup.sh.local
[2026-01-10 19:09:55] -rw-------. 1 boincer umatlas    989548 Jan 10 18:10 agis_schedconf.cvmfs.json
[2026-01-10 19:09:55] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:10 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:09:55] drwx------. 5 boincer umatlas      4096 Jan 10 18:10 pilot3
[2026-01-10 19:09:55] -rw-r--r--. 1 boincer umatlas      6942 Jan 10 19:01 init_data.xml
[2026-01-10 19:09:55] -rw-r--r--. 1 boincer umatlas       529 Jan 10 19:04 boinc_task_state.xml
[2026-01-10 19:09:55] -rw-------. 1 boincer umatlas  46088461 Jan 10 19:09 HITS.47962010._002813.pool.root.1
[2026-01-10 19:09:55] -rw-------. 1 boincer umatlas      1038 Jan 10 19:09 memory_monitor_summary.json
[2026-01-10 19:09:55] -rw-------. 1 boincer umatlas   1384321 Jan 10 19:09 log.47962010._002813.job.log.tgz.1
[2026-01-10 19:09:55] -rw-------. 1 boincer umatlas      8528 Jan 10 19:09 heartbeat.json
[2026-01-10 19:09:55] -rw-r--r--. 1 boincer umatlas        27 Jan 10 19:09 wrapper_checkpoint.txt
[2026-01-10 19:09:55] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 19:09 boinc_mmap_file
[2026-01-10 19:09:55] -rw-------. 1 boincer umatlas       822 Jan 10 19:09 pilotlog.txt
[2026-01-10 19:09:55] -rw-------. 1 boincer umatlas        95 Jan 10 19:09 pilot_heartbeat.json
[2026-01-10 19:09:55] -rw-------. 1 boincer umatlas    536272 Jan 10 19:09 log.47962010._002813.job.log.1
[2026-01-10 19:09:55] -rw-------. 1 boincer umatlas       353 Jan 10 19:09 output.list
[2026-01-10 19:09:55] -rw-r--r--. 1 boincer umatlas       620 Jan 10 19:09 runtime_log
[2026-01-10 19:09:55] -rw-------. 1 boincer umatlas   1935360 Jan 10 19:09 result.tar.gz
[2026-01-10 19:09:55] -rw-r--r--. 1 boincer umatlas      9339 Jan 10 19:09 runtime_log.err
[2026-01-10 19:09:55] -rw-------. 1 boincer umatlas       651 Jan 10 19:09 G67KDmJCxy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4ehKDmi0IJMm.diag
[2026-01-10 19:09:55] -rw-r--r--. 1 boincer umatlas     21289 Jan 10 19:09 stderr.txt
[2026-01-10 19:09:55] HITS file was successfully produced:
[2026-01-10 19:09:55] -rw-------. 1 boincer umatlas 46088461 Jan 10 19:09 shared/HITS.pool.root.1
[2026-01-10 19:09:55]  *** Contents of shared directory: ***
[2026-01-10 19:09:55] total 430272
[2026-01-10 19:09:55] -rw-r--r--. 2 boincer umatlas 391949667 Jan 10 18:10 ATLAS.root_0
[2026-01-10 19:09:55] -rw-r--r--. 2 boincer umatlas    592614 Jan 10 18:10 input.tar.gz
[2026-01-10 19:09:55] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 19:09:55] -rw-------. 1 boincer umatlas  46088461 Jan 10 19:09 HITS.pool.root.1
[2026-01-10 19:09:55] -rw-------. 1 boincer umatlas   1935360 Jan 10 19:09 result.tar.gz
19:09:56 (211250): run_atlas exited; CPU time 11557.458894
19:09:56 (211250): called boinc_finish(0)

</stderr_txt>
]]>

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