Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:10:04 (18071): wrapper (7.7.26015): starting
18:10:04 (18071): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 18:10:04] Arguments: --nthreads 12
[2026-01-10 18:10:04] Threads: 12
[2026-01-10 18:10:04] Checking for CVMFS
[2026-01-10 18:10:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:10:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:10:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:10:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:10:04] 2.11.2.0 2947 353077 97104 154996 4 1 14613885 20275201 1 130560 1 150111417 99.954 20656855 14810 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 18:10:04] CVMFS is ok
[2026-01-10 18:10:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:10:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:10:04] Further information can be found at the LHC@home message board.
[2026-01-10 18:10:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:10:04] Checking for apptainer binary...
[2026-01-10 18:10:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:10:04] Running /usr/bin/apptainer --version
[2026-01-10 18:10:04] apptainer version 1.3.2-1.el7
[2026-01-10 18:10:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:10:06] c-205-18.aglt2.org
[2026-01-10 18:10:06] apptainer works
[2026-01-10 18:10:06] Set ATHENA_PROC_NUMBER=12
[2026-01-10 18:10:06] Set ATHENA_CORE_NUMBER=12
[2026-01-10 18:10:06] Starting ATLAS job with PandaID=6965803338
[2026-01-10 18:10:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 18:46:34]  *** The last 200 lines of the pilot log: ***
[2026-01-10 18:46:34]  guid=7fb77c28-cc07-4da4-8b14-6fd8bb652ee6
[2026-01-10 18:46:34]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-10 18:46:34]  is_altstaged=None
[2026-01-10 18:46:34]  is_tar=False
[2026-01-10 18:46:34]  lfn=log.47962010._002790.job.log.tgz.1
[2026-01-10 18:46:34]  mtime=0
[2026-01-10 18:46:34]  protocol_id=None
[2026-01-10 18:46:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 18:46:34]  replicas=None
[2026-01-10 18:46:34]  scope=mc16_13TeV
[2026-01-10 18:46:34]  status=None
[2026-01-10 18:46:34]  status_code=0
[2026-01-10 18:46:34]  storage_token=
[2026-01-10 18:46:34]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6965803338/log.47962010._002790.job.log.tgz.1
[2026-01-10 18:46:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/da/f2/log.47962010._002790.job.log.tgz.1
[2026-01-10 18:46:34]  workdir=None
[2026-01-10 18:46:34] ]
[2026-01-10 18:46:34] 2026-01-10 23:45:56,787 | INFO     | transferring file log.47962010._002790.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6965803338/log.47962010._002790.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 18:46:34] 2026-01-10 23:45:56,787 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6965803338/log.47962010._002790.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._002790.job
[2026-01-10 18:46:34] 2026-01-10 23:45:56,810 | INFO     | adding to output.list: log.47962010._002790.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/da/f2/log.47962010._002790.job.log.tgz.
[2026-01-10 18:46:34] 2026-01-10 23:45:56,811 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 18:46:34] 2026-01-10 23:45:56,811 | INFO     | summary of transferred files:
[2026-01-10 18:46:34] 2026-01-10 23:45:56,811 | INFO     |  -- lfn=log.47962010._002790.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 18:46:34] 2026-01-10 23:45:56,812 | INFO     | stage-out finished correctly
[2026-01-10 18:46:34] 2026-01-10 23:45:56,893 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 18:46:34] 2026-01-10 23:45:57,270 | INFO     | time since job start (2135s) is within the limit (349056.0s)
[2026-01-10 18:46:34] 2026-01-10 23:45:57,508 | INFO     | job 6965803338 has state=finished
[2026-01-10 18:46:34] 2026-01-10 23:45:57,509 | INFO     | preparing for final server update for job 6965803338 in state='finished'
[2026-01-10 18:46:34] 2026-01-10 23:45:57,509 | INFO     | this job has now completed (state=finished)
[2026-01-10 18:46:34] 2026-01-10 23:45:57,509 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 18:46:34] 2026-01-10 23:45:57,510 | INFO     | log transfer has been attempted: DONE
[2026-01-10 18:46:34] 2026-01-10 23:45:57,510 | INFO     | job 6965803338 has finished - writing final server update
[2026-01-10 18:46:34] 2026-01-10 23:45:57,510 | INFO     | total number of processed events: 50 (read)
[2026-01-10 18:46:34] 2026-01-10 23:45:57,528 | INFO     | executing command: lscpu
[2026-01-10 18:46:34] 2026-01-10 23:45:57,553 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 18:46:34] 2026-01-10 23:45:59,272 | INFO     | time since job start (2137s) is within the limit (349056.0s)
[2026-01-10 18:46:34] 2026-01-10 23:46:01,278 | INFO     | time since job start (2139s) is within the limit (349056.0s)
[2026-01-10 18:46:34] 2026-01-10 23:46:02,038 | WARNING  | process 28150 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 18:46:34] 2026-01-10 23:46:02,038 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965803338/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 18:46:34] 2026-01-10 23:46:02,124 | INFO     | number of running child processes to parent process 28150: 1
[2026-01-10 18:46:34] 2026-01-10 23:46:02,124 | INFO     | maximum number of monitored processes: 18
[2026-01-10 18:46:34] 2026-01-10 23:46:02,899 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 18:46:34] 2026-01-10 23:46:02,903 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2026-01-10 18:46:34] 2026-01-10 23:46:02,905 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965803338/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 18:46:34] 2026-01-10 23:46:02,906 | INFO     | extracted standard info from prmon json
[2026-01-10 18:46:34] 2026-01-10 23:46:02,906 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 18:46:34] 2026-01-10 23:46:02,907 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 18:46:34] 2026-01-10 23:46:02,908 | INFO     | fitting pss+swap vs Time
[2026-01-10 18:46:34] 2026-01-10 23:46:02,908 | INFO     | sum of square deviations: 6798756.857142857
[2026-01-10 18:46:34] 2026-01-10 23:46:02,909 | INFO     | sum of deviations: -2332597657.714286
[2026-01-10 18:46:34] 2026-01-10 23:46:02,909 | INFO     | mean x: 1768087780.5714285
[2026-01-10 18:46:34] 2026-01-10 23:46:02,909 | INFO     | mean y: 2815957.8571428573
[2026-01-10 18:46:34] 2026-01-10 23:46:02,909 | INFO     | intersect: 606619216904.92
[2026-01-10 18:46:34] 2026-01-10 23:46:02,909 | INFO     | chi2: 0.3941584122633162
[2026-01-10 18:46:34] 2026-01-10 23:46:02,909 | INFO     | current memory leak: -343.09 B/s (using 28 data points, chi2=0.39)
[2026-01-10 18:46:34] 2026-01-10 23:46:02,910 | INFO     | could have reported an average CPU frequency of 1817 MHz (5 samples)
[2026-01-10 18:46:34] 2026-01-10 23:46:02,910 | INFO     | ..............................
[2026-01-10 18:46:34] 2026-01-10 23:46:02,910 | INFO     | . Timing measurements:
[2026-01-10 18:46:34] 2026-01-10 23:46:02,910 | INFO     | . get job = 0 s
[2026-01-10 18:46:34] 2026-01-10 23:46:02,910 | INFO     | . initial setup = 2 s
[2026-01-10 18:46:34] 2026-01-10 23:46:02,910 | INFO     | . payload setup = 8 s
[2026-01-10 18:46:34] 2026-01-10 23:46:02,910 | INFO     | . stage-in = 0 s
[2026-01-10 18:46:34] 2026-01-10 23:46:02,911 | INFO     | . payload execution = 2105 s
[2026-01-10 18:46:34] 2026-01-10 23:46:02,911 | INFO     | . stage-out = 0 s
[2026-01-10 18:46:34] 2026-01-10 23:46:02,911 | INFO     | . log creation = 0 s
[2026-01-10 18:46:34] 2026-01-10 23:46:02,911 | INFO     | ..............................
[2026-01-10 18:46:34] 2026-01-10 23:46:03,083 | INFO     | 
[2026-01-10 18:46:34] 2026-01-10 23:46:03,084 | INFO     | job summary report
[2026-01-10 18:46:34] 2026-01-10 23:46:03,084 | INFO     | --------------------------------------------------
[2026-01-10 18:46:34] 2026-01-10 23:46:03,084 | INFO     | PanDA job id: 6965803338
[2026-01-10 18:46:34] 2026-01-10 23:46:03,084 | INFO     | task id: 47962010
[2026-01-10 18:46:34] 2026-01-10 23:46:03,084 | INFO     | errors: (none)
[2026-01-10 18:46:34] 2026-01-10 23:46:03,085 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 18:46:34] 2026-01-10 23:46:03,085 | INFO     | pilot state: finished 
[2026-01-10 18:46:34] 2026-01-10 23:46:03,085 | INFO     | transexitcode: 0
[2026-01-10 18:46:34] 2026-01-10 23:46:03,085 | INFO     | exeerrorcode: 0
[2026-01-10 18:46:34] 2026-01-10 23:46:03,085 | INFO     | exeerrordiag: 
[2026-01-10 18:46:34] 2026-01-10 23:46:03,085 | INFO     | exitcode: 0
[2026-01-10 18:46:34] 2026-01-10 23:46:03,086 | INFO     | exitmsg: OK
[2026-01-10 18:46:34] 2026-01-10 23:46:03,086 | INFO     | cpuconsumptiontime: 18893 s
[2026-01-10 18:46:34] 2026-01-10 23:46:03,086 | INFO     | nevents: 50
[2026-01-10 18:46:34] 2026-01-10 23:46:03,086 | INFO     | neventsw: 0
[2026-01-10 18:46:34] 2026-01-10 23:46:03,086 | INFO     | pid: 28150
[2026-01-10 18:46:34] 2026-01-10 23:46:03,086 | INFO     | pgrp: 28150
[2026-01-10 18:46:34] 2026-01-10 23:46:03,087 | INFO     | corecount: 12
[2026-01-10 18:46:34] 2026-01-10 23:46:03,087 | INFO     | event service: False
[2026-01-10 18:46:34] 2026-01-10 23:46:03,087 | INFO     | sizes: {0: 2284569, 5: 2284831, 11: 2284887, 2117: 2309381, 2118: 2318431, 2124: 2318653}
[2026-01-10 18:46:34] 2026-01-10 23:46:03,087 | INFO     | --------------------------------------------------
[2026-01-10 18:46:34] 2026-01-10 23:46:03,087 | INFO     | 
[2026-01-10 18:46:34] 2026-01-10 23:46:03,087 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 18:46:34] 2026-01-10 23:46:03,109 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 18:46:34] 2026-01-10 23:46:03,109 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 18:46:34] 2026-01-10 23:46:03,110 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 18:46:34] 2026-01-10 23:46:03,110 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 18:46:34] 2026-01-10 23:46:03,110 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 18:46:34] 2026-01-10 23:46:03,110 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 18:46:34] 2026-01-10 23:46:03,110 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 18:46:34] 2026-01-10 23:46:03,111 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 18:46:34] 2026-01-10 23:46:03,111 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 18:46:34] 2026-01-10 23:46:03,111 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 18:46:34] 2026-01-10 23:46:03,111 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 18:46:34] 2026-01-10 23:46:03,111 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 18:46:34] 2026-01-10 23:46:03,111 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 18:46:34] 2026-01-10 23:46:03,112 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 18:46:34] 2026-01-10 23:46:03,112 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 18:46:34] 2026-01-10 23:46:03,112 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 18:46:34] 2026-01-10 23:46:03,112 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 18:46:34] 2026-01-10 23:46:03,112 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 18:46:34] 2026-01-10 23:46:03,112 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 18:46:34] 2026-01-10 23:46:03,113 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 18:46:34] 2026-01-10 23:46:03,113 | INFO     | job 6965803338 has completed (purged errors)
[2026-01-10 18:46:34] 2026-01-10 23:46:03,113 | INFO     | overall cleanup function is called
[2026-01-10 18:46:34] 2026-01-10 23:46:04,129 | INFO     | --- collectZombieJob: --- 10, [28150]
[2026-01-10 18:46:34] 2026-01-10 23:46:04,129 | INFO     | zombie collector waiting for pid 28150
[2026-01-10 18:46:34] 2026-01-10 23:46:04,129 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 18:46:34] 2026-01-10 23:46:04,129 | INFO     | collected zombie processes
[2026-01-10 18:46:34] 2026-01-10 23:46:04,129 | INFO     | will attempt to kill all subprocesses of pid=28150
[2026-01-10 18:46:34] 2026-01-10 23:46:04,221 | INFO     | process IDs to be killed: [28150] (in reverse order)
[2026-01-10 18:46:34] 2026-01-10 23:46:04,276 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 18:46:34] 2026-01-10 23:46:04,277 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 18:46:34] 2026-01-10 23:46:04,280 | INFO     | did not find any defunct processes belonging to 28150
[2026-01-10 18:46:34] 2026-01-10 23:46:04,282 | INFO     | did not find any defunct processes belonging to 28150
[2026-01-10 18:46:34] 2026-01-10 23:46:04,282 | INFO     | ready for new job
[2026-01-10 18:46:34] 2026-01-10 23:46:04,282 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 18:46:34] 2026-01-10 23:46:04,283 | INFO     | ***************************************
[2026-01-10 18:46:34] 2026-01-10 23:46:04,283 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 18:46:34] 2026-01-10 23:46:04,283 | INFO     | ***************************************
[2026-01-10 18:46:34] 2026-01-10 23:46:04,283 | INFO     | 
[2026-01-10 18:46:34] 2026-01-10 23:46:04,284 | INFO     | architecture information:
[2026-01-10 18:46:34] 2026-01-10 23:46:04,285 | INFO     | executing command: cat /etc/os-release
[2026-01-10 18:46:34] 2026-01-10 23:46:04,301 | INFO     | cat /etc/os-release:
[2026-01-10 18:46:34] NAME="CentOS Linux"
[2026-01-10 18:46:34] VERSION="7 (Core)"
[2026-01-10 18:46:34] ID="centos"
[2026-01-10 18:46:34] ID_LIKE="rhel fedora"
[2026-01-10 18:46:34] VERSION_ID="7"
[2026-01-10 18:46:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 18:46:34] ANSI_COLOR="0;31"
[2026-01-10 18:46:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 18:46:34] HOME_URL="https://www.centos.org/"
[2026-01-10 18:46:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 18:46:34] 
[2026-01-10 18:46:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 18:46:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 18:46:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 18:46:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 18:46:34] 
[2026-01-10 18:46:34] 2026-01-10 23:46:04,301 | INFO     | ***************************************
[2026-01-10 18:46:34] 2026-01-10 23:46:04,804 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 18:46:34] 2026-01-10 23:46:04,822 | INFO     | sufficient remaining disk space (29150412800 B)
[2026-01-10 18:46:34] 2026-01-10 23:46:04,822 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 18:46:34] 2026-01-10 23:46:04,822 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 18:46:34] 2026-01-10 23:46:04,823 | INFO     | update_server=False
[2026-01-10 18:46:34] 2026-01-10 23:46:04,823 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 18:46:34] 2026-01-10 23:46:04,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 18:46:34] 2026-01-10 23:46:04,903 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 18:46:34] 2026-01-10 23:46:04,981 | INFO     | all payload control threads have been joined
[2026-01-10 18:46:34] 2026-01-10 23:46:05,633 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 18:46:34] 2026-01-10 23:46:05,633 | INFO     | aborting loop
[2026-01-10 18:46:34] 2026-01-10 23:46:05,814 | INFO     | all data control threads have been joined
[2026-01-10 18:46:34] 2026-01-10 23:46:05,824 | INFO     | [job] retrieve thread has finished
[2026-01-10 18:46:34] 2026-01-10 23:46:05,826 | INFO     | [job] queue monitor thread has finished
[2026-01-10 18:46:34] 2026-01-10 23:46:05,897 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 18:46:34] 2026-01-10 23:46:05,927 | INFO     | [payload] failed_post thread has finished
[2026-01-10 18:46:34] 2026-01-10 23:46:05,986 | INFO     | [payload] control thread has finished
[2026-01-10 18:46:34] 2026-01-10 23:46:05,987 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 18:46:34] 2026-01-10 23:46:06,282 | INFO     | all job control threads have been joined
[2026-01-10 18:46:34] 2026-01-10 23:46:06,364 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 18:46:34] 2026-01-10 23:46:06,534 | INFO     | [data] copytool_in thread has finished
[2026-01-10 18:46:34] 2026-01-10 23:46:06,570 | INFO     | [payload] validate_post thread has finished
[2026-01-10 18:46:34] 2026-01-10 23:46:06,638 | INFO     | [job] job monitor thread has finished
[2026-01-10 18:46:34] 2026-01-10 23:46:06,819 | INFO     | [data] control thread has finished
[2026-01-10 18:46:34] 2026-01-10 23:46:06,909 | INFO     | [data] copytool_out thread has finished
[2026-01-10 18:46:34] 2026-01-10 23:46:06,991 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 18:46:34] 2026-01-10 23:46:07,062 | INFO     | [job] validate thread has finished
[2026-01-10 18:46:34] 2026-01-10 23:46:07,287 | INFO     | [job] control thread has finished
[2026-01-10 18:46:34] 2026-01-10 23:46:07,490 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 18:46:34] 2026-01-10 23:46:11,496 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 18:46:34] 2026-01-10 23:46:25,268 | INFO     | [monitor] cgroup control has ended
[2026-01-10 18:46:34] 2026-01-10 23:46:27,316 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139652498560832)>', '<ExcThread(monitor, started 139651901798144)>']
[2026-01-10 18:46:34] 2026-01-10 23:46:32,342 | INFO     | all workflow threads have been joined
[2026-01-10 18:46:34] 2026-01-10 23:46:32,342 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 18:46:34] 2026-01-10 23:46:32,343 | INFO     | traces error code: 0
[2026-01-10 18:46:34] 2026-01-10 23:46:32,343 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 18:46:34] 2026-01-10 23:46:34,481 | INFO     | PID=21765 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 18:46:34] 2026-01-10 23:46:34,481 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 18:46:34] 2026-01-10 23:46:34,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 18:46:34] 2026-01-10 23:46:34,481 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 18:46:34] 2026-01-10 23:46:34,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 18:46:34] 2026-01-10 23:46:34,481 | INFO     | [monitor] control thread has ended
[2026-01-10 18:46:34] 2026-01-10 23:46:34,578 [wrapper] ==== pilot stdout END ====
[2026-01-10 18:46:34] 2026-01-10 23:46:34,582 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 18:46:34] 2026-01-10 23:46:34,586 [wrapper] pilotpid: 21765
[2026-01-10 18:46:34] 2026-01-10 23:46:34,589 [wrapper] Pilot exit status: 0
[2026-01-10 18:46:34] 2026-01-10 23:46:34,603 [wrapper] pandaids: 6965803338
[2026-01-10 18:46:34] 2026-01-10 23:46:34,647 [wrapper] cleanup supervisor_pilot  9802 21766
[2026-01-10 18:46:34] 2026-01-10 23:46:34,651 [wrapper] Test setup, not cleaning
[2026-01-10 18:46:34] 2026-01-10 23:46:34,655 [wrapper] apfmon messages muted
[2026-01-10 18:46:34] 2026-01-10 23:46:34,659 [wrapper] ==== wrapper stdout END ====
[2026-01-10 18:46:34] 2026-01-10 23:46:34,663 [wrapper] ==== wrapper stderr END ====
[2026-01-10 18:46:34]  *** Error codes and diagnostics ***
[2026-01-10 18:46:34]     "exeErrorCode": 0,
[2026-01-10 18:46:34]     "exeErrorDiag": "",
[2026-01-10 18:46:34]     "pilotErrorCode": 0,
[2026-01-10 18:46:34]     "pilotErrorDiag": "",
[2026-01-10 18:46:34]  *** Listing of results directory ***
[2026-01-10 18:46:34] total 435204
[2026-01-10 18:46:34] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 18:46:34] -rwx------ 1 boincer umatlas     36322 Jan 10 18:05 runpilot2-wrapper.sh
[2026-01-10 18:46:34] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 18:46:34] -rw-r--r-- 1 boincer umatlas       100 Jan 10 18:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 18:46:34] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 18:09 run_atlas
[2026-01-10 18:46:34] -rw-r--r-- 1 boincer umatlas       105 Jan 10 18:09 job.xml
[2026-01-10 18:46:34] -rw-r--r-- 2 boincer umatlas 392436403 Jan 10 18:10 EVNT.47962006._000092.pool.root.1
[2026-01-10 18:46:34] -rw-r--r-- 2 boincer umatlas    592613 Jan 10 18:10 input.tar.gz
[2026-01-10 18:46:34] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 18:46:34] drwxrwx--x 2 boincer umatlas      4096 Jan 10 18:10 shared
[2026-01-10 18:46:34] -rw-r--r-- 1 boincer umatlas         0 Jan 10 18:10 boinc_lockfile
[2026-01-10 18:46:34] -rw-r--r-- 1 boincer umatlas      2890 Jan 10 18:10 pandaJob.out
[2026-01-10 18:46:34] -rw------- 1 boincer umatlas        57 Jan 10 18:10 setup.sh.local
[2026-01-10 18:46:34] -rw------- 1 boincer umatlas    989548 Jan 10 18:10 agis_schedconf.cvmfs.json
[2026-01-10 18:46:34] -rw------- 1 boincer umatlas   1516240 Jan 10 18:10 agis_ddmendpoints.agis.ALL.json
[2026-01-10 18:46:34] drwx------ 5 boincer umatlas      4096 Jan 10 18:10 pilot3
[2026-01-10 18:46:34] -rw-r--r-- 1 boincer umatlas       529 Jan 10 18:36 boinc_task_state.xml
[2026-01-10 18:46:34] -rw-r--r-- 1 boincer umatlas      5952 Jan 10 18:45 init_data.xml
[2026-01-10 18:46:34] -rw------- 1 boincer umatlas        95 Jan 10 18:45 pilot_heartbeat.json
[2026-01-10 18:46:34] -rw------- 1 boincer umatlas  45424544 Jan 10 18:45 HITS.47962010._002790.pool.root.1
[2026-01-10 18:46:34] -rw------- 1 boincer umatlas      1049 Jan 10 18:45 memory_monitor_summary.json
[2026-01-10 18:46:34] -rw------- 1 boincer umatlas   1589288 Jan 10 18:45 log.47962010._002790.job.log.tgz.1
[2026-01-10 18:46:34] -rw------- 1 boincer umatlas      7938 Jan 10 18:46 heartbeat.json
[2026-01-10 18:46:34] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 18:46 boinc_mmap_file
[2026-01-10 18:46:34] -rw-r--r-- 1 boincer umatlas        27 Jan 10 18:46 wrapper_checkpoint.txt
[2026-01-10 18:46:34] -rw------- 1 boincer umatlas       745 Jan 10 18:46 pilotlog.txt
[2026-01-10 18:46:34] -rw------- 1 boincer umatlas    351995 Jan 10 18:46 log.47962010._002790.job.log.1
[2026-01-10 18:46:34] -rw------- 1 boincer umatlas       353 Jan 10 18:46 output.list
[2026-01-10 18:46:34] -rw-r--r-- 1 boincer umatlas       620 Jan 10 18:46 runtime_log
[2026-01-10 18:46:34] -rw------- 1 boincer umatlas   1955840 Jan 10 18:46 result.tar.gz
[2026-01-10 18:46:34] -rw------- 1 boincer umatlas       659 Jan 10 18:46 SVsKDmJCxy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsehKDmhTiOYm.diag
[2026-01-10 18:46:34] -rw-r--r-- 1 boincer umatlas      9344 Jan 10 18:46 runtime_log.err
[2026-01-10 18:46:34] -rw-r--r-- 1 boincer umatlas     21447 Jan 10 18:46 stderr.txt
[2026-01-10 18:46:34] HITS file was successfully produced:
[2026-01-10 18:46:34] -rw------- 1 boincer umatlas 45424544 Jan 10 18:45 shared/HITS.pool.root.1
[2026-01-10 18:46:34]  *** Contents of shared directory: ***
[2026-01-10 18:46:34] total 430112
[2026-01-10 18:46:34] -rw-r--r-- 2 boincer umatlas 392436403 Jan 10 18:10 ATLAS.root_0
[2026-01-10 18:46:34] -rw-r--r-- 2 boincer umatlas    592613 Jan 10 18:10 input.tar.gz
[2026-01-10 18:46:34] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 18:46:34] -rw------- 1 boincer umatlas  45424544 Jan 10 18:45 HITS.pool.root.1
[2026-01-10 18:46:34] -rw------- 1 boincer umatlas   1955840 Jan 10 18:46 result.tar.gz
18:46:36 (18071): run_atlas exited; CPU time 18505.311091
18:46:36 (18071): called boinc_finish(0)

</stderr_txt>
]]>

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