Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:10:22 (28477): wrapper (7.7.26015): starting
18:10:22 (28477): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 18:10:22] Arguments: --nthreads 8
[2026-01-10 18:10:22] Threads: 8
[2026-01-10 18:10:22] Checking for CVMFS
[2026-01-10 18:10:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:10:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:10:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:10:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:10:22] 2.11.2.0 4697 183107 127776 154996 3 1 16759556 18432000 1 130560 0 123220459 99.980 7134162 34232 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 18:10:22] CVMFS is ok
[2026-01-10 18:10:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:10:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:10:22] Further information can be found at the LHC@home message board.
[2026-01-10 18:10:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:10:22] Checking for apptainer binary...
[2026-01-10 18:10:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:10:22] Running /usr/bin/apptainer --version
[2026-01-10 18:10:22] apptainer version 1.3.2-1.el7
[2026-01-10 18:10:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:10:24] c-206-21.aglt2.org
[2026-01-10 18:10:24] apptainer works
[2026-01-10 18:10:24] Set ATHENA_PROC_NUMBER=8
[2026-01-10 18:10:24] Set ATHENA_CORE_NUMBER=8
[2026-01-10 18:10:24] Starting ATLAS job with PandaID=6965803328
[2026-01-10 18:10:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:24:49]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:24:49]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-10 19:24:49]  is_altstaged=None
[2026-01-10 19:24:49]  is_tar=False
[2026-01-10 19:24:49]  lfn=log.47962010._002780.job.log.tgz.1
[2026-01-10 19:24:49]  mtime=0
[2026-01-10 19:24:49]  protocol_id=None
[2026-01-10 19:24:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 19:24:49]  replicas=None
[2026-01-10 19:24:49]  scope=mc16_13TeV
[2026-01-10 19:24:49]  status=None
[2026-01-10 19:24:49]  status_code=0
[2026-01-10 19:24:49]  storage_token=
[2026-01-10 19:24:49]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6965803328/log.47962010._002780.job.log.tgz.1
[2026-01-10 19:24:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/d1/e0/log.47962010._002780.job.log.tgz.1
[2026-01-10 19:24:49]  workdir=None
[2026-01-10 19:24:49] ]
[2026-01-10 19:24:49] 2026-01-11 00:23:46,431 | INFO     | transferring file log.47962010._002780.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6965803328/log.47962010._002780.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 19:24:49] 2026-01-11 00:23:46,431 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6965803328/log.47962010._002780.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._002780.job
[2026-01-10 19:24:49] 2026-01-11 00:23:46,472 | INFO     | adding to output.list: log.47962010._002780.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/d1/e0/log.47962010._002780.job.log.tgz.
[2026-01-10 19:24:49] 2026-01-11 00:23:46,473 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 19:24:49] 2026-01-11 00:23:46,473 | INFO     | summary of transferred files:
[2026-01-10 19:24:49] 2026-01-11 00:23:46,473 | INFO     |  -- lfn=log.47962010._002780.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 19:24:49] 2026-01-11 00:23:46,473 | INFO     | stage-out finished correctly
[2026-01-10 19:24:49] 2026-01-11 00:23:47,148 | INFO     | time since job start (4390s) is within the limit (349056.0s)
[2026-01-10 19:24:49] 2026-01-11 00:23:48,515 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 19:24:49] 2026-01-11 00:23:48,598 | INFO     | job 6965803328 has state=finished
[2026-01-10 19:24:49] 2026-01-11 00:23:48,598 | INFO     | preparing for final server update for job 6965803328 in state='finished'
[2026-01-10 19:24:49] 2026-01-11 00:23:48,598 | INFO     | this job has now completed (state=finished)
[2026-01-10 19:24:49] 2026-01-11 00:23:48,598 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 19:24:49] 2026-01-11 00:23:48,599 | INFO     | log transfer has been attempted: DONE
[2026-01-10 19:24:49] 2026-01-11 00:23:48,599 | INFO     | job 6965803328 has finished - writing final server update
[2026-01-10 19:24:49] 2026-01-11 00:23:48,599 | INFO     | total number of processed events: 50 (read)
[2026-01-10 19:24:49] 2026-01-11 00:23:48,600 | INFO     | executing command: lscpu
[2026-01-10 19:24:49] 2026-01-11 00:23:48,626 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 19:24:49] 2026-01-11 00:23:48,718 | INFO     | monitor loop #323: job 0:6965803328 is in state 'finished'
[2026-01-10 19:24:49] 2026-01-11 00:23:48,718 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:24:49] 2026-01-11 00:23:49,154 | INFO     | time since job start (4392s) is within the limit (349056.0s)
[2026-01-10 19:24:49] 2026-01-11 00:23:51,159 | INFO     | time since job start (4394s) is within the limit (349056.0s)
[2026-01-10 19:24:49] 2026-01-11 00:23:51,221 | INFO     | monitor loop #324: job 0:6965803328 is in state 'finished'
[2026-01-10 19:24:49] 2026-01-11 00:23:51,222 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:24:49] 2026-01-11 00:23:53,164 | INFO     | time since job start (4396s) is within the limit (349056.0s)
[2026-01-10 19:24:49] 2026-01-11 00:23:53,270 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 19:24:49] 2026-01-11 00:23:53,277 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1729.0416666666667
[2026-01-10 19:24:49] 2026-01-11 00:23:53,281 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965803328/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:24:49] 2026-01-11 00:23:53,282 | INFO     | extracted standard info from prmon json
[2026-01-10 19:24:49] 2026-01-11 00:23:53,283 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:24:49] 2026-01-11 00:23:53,283 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:24:49] 2026-01-11 00:23:53,285 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:24:49] 2026-01-11 00:23:53,285 | INFO     | sum of square deviations: 85116000.21538448
[2026-01-10 19:24:49] 2026-01-11 00:23:53,285 | INFO     | sum of deviations: 2061974402.3230755
[2026-01-10 19:24:49] 2026-01-11 00:23:53,285 | INFO     | mean x: 1768088923.523077
[2026-01-10 19:24:49] 2026-01-11 00:23:53,285 | INFO     | mean y: 2500831.7846153844
[2026-01-10 19:24:49] 2026-01-11 00:23:53,286 | INFO     | intersect: -42830269647.444115
[2026-01-10 19:24:49] 2026-01-11 00:23:53,286 | INFO     | chi2: 0.21370110521922359
[2026-01-10 19:24:49] 2026-01-11 00:23:53,286 | INFO     | current memory leak: 24.23 B/s (using 65 data points, chi2=0.21)
[2026-01-10 19:24:49] 2026-01-11 00:23:53,286 | INFO     | could have reported an average CPU frequency of 2052 MHz (6 samples)
[2026-01-10 19:24:49] 2026-01-11 00:23:53,286 | INFO     | ..............................
[2026-01-10 19:24:49] 2026-01-11 00:23:53,286 | INFO     | . Timing measurements:
[2026-01-10 19:24:49] 2026-01-11 00:23:53,287 | INFO     | . get job = 0 s
[2026-01-10 19:24:49] 2026-01-11 00:23:53,287 | INFO     | . initial setup = 2 s
[2026-01-10 19:24:49] 2026-01-11 00:23:53,287 | INFO     | . payload setup = 7 s
[2026-01-10 19:24:49] 2026-01-11 00:23:53,287 | INFO     | . stage-in = 0 s
[2026-01-10 19:24:49] 2026-01-11 00:23:53,287 | INFO     | . payload execution = 4361 s
[2026-01-10 19:24:49] 2026-01-11 00:23:53,287 | INFO     | . stage-out = 0 s
[2026-01-10 19:24:49] 2026-01-11 00:23:53,287 | INFO     | . log creation = 0 s
[2026-01-10 19:24:49] 2026-01-11 00:23:53,287 | INFO     | ..............................
[2026-01-10 19:24:49] 2026-01-11 00:23:53,369 | INFO     | 
[2026-01-10 19:24:49] 2026-01-11 00:23:53,369 | INFO     | job summary report
[2026-01-10 19:24:49] 2026-01-11 00:23:53,369 | INFO     | --------------------------------------------------
[2026-01-10 19:24:49] 2026-01-11 00:23:53,369 | INFO     | PanDA job id: 6965803328
[2026-01-10 19:24:49] 2026-01-11 00:23:53,369 | INFO     | task id: 47962010
[2026-01-10 19:24:49] 2026-01-11 00:23:53,369 | INFO     | errors: (none)
[2026-01-10 19:24:49] 2026-01-11 00:23:53,370 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:24:49] 2026-01-11 00:23:53,370 | INFO     | pilot state: finished 
[2026-01-10 19:24:49] 2026-01-11 00:23:53,370 | INFO     | transexitcode: 0
[2026-01-10 19:24:49] 2026-01-11 00:23:53,370 | INFO     | exeerrorcode: 0
[2026-01-10 19:24:49] 2026-01-11 00:23:53,370 | INFO     | exeerrordiag: 
[2026-01-10 19:24:49] 2026-01-11 00:23:53,370 | INFO     | exitcode: 0
[2026-01-10 19:24:49] 2026-01-11 00:23:53,370 | INFO     | exitmsg: OK
[2026-01-10 19:24:49] 2026-01-11 00:23:53,370 | INFO     | cpuconsumptiontime: 30854 s
[2026-01-10 19:24:49] 2026-01-11 00:23:53,370 | INFO     | nevents: 50
[2026-01-10 19:24:49] 2026-01-11 00:23:53,370 | INFO     | neventsw: 0
[2026-01-10 19:24:49] 2026-01-11 00:23:53,371 | INFO     | pid: 17930
[2026-01-10 19:24:49] 2026-01-11 00:23:53,371 | INFO     | pgrp: 17930
[2026-01-10 19:24:49] 2026-01-11 00:23:53,371 | INFO     | corecount: 8
[2026-01-10 19:24:49] 2026-01-11 00:23:53,371 | INFO     | event service: False
[2026-01-10 19:24:49] 2026-01-11 00:23:53,371 | INFO     | sizes: {0: 2284569, 1: 2284569, 5: 2284859, 11: 2284915, 4372: 2311736, 4373: 2311735, 4374: 2320913, 4376: 2320969, 4380: 2321215}
[2026-01-10 19:24:49] 2026-01-11 00:23:53,371 | INFO     | --------------------------------------------------
[2026-01-10 19:24:49] 2026-01-11 00:23:53,371 | INFO     | 
[2026-01-10 19:24:49] 2026-01-11 00:23:53,371 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 19:24:49] 2026-01-11 00:23:53,392 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:24:49] 2026-01-11 00:23:53,392 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:24:49] 2026-01-11 00:23:53,393 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:24:49] 2026-01-11 00:23:53,393 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:24:49] 2026-01-11 00:23:53,393 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:24:49] 2026-01-11 00:23:53,393 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:24:49] 2026-01-11 00:23:53,393 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:24:49] 2026-01-11 00:23:53,393 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:24:49] 2026-01-11 00:23:53,393 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:24:49] 2026-01-11 00:23:53,393 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:24:49] 2026-01-11 00:23:53,394 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:24:49] 2026-01-11 00:23:53,394 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:24:49] 2026-01-11 00:23:53,394 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:24:49] 2026-01-11 00:23:53,394 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:24:49] 2026-01-11 00:23:53,394 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:24:49] 2026-01-11 00:23:53,394 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:24:49] 2026-01-11 00:23:53,394 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:24:49] 2026-01-11 00:23:53,394 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:24:49] 2026-01-11 00:23:53,394 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:24:49] 2026-01-11 00:23:53,395 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:24:49] 2026-01-11 00:23:53,395 | INFO     | job 6965803328 has completed (purged errors)
[2026-01-10 19:24:49] 2026-01-11 00:23:53,395 | INFO     | overall cleanup function is called
[2026-01-10 19:24:49] 2026-01-11 00:23:54,402 | INFO     | --- collectZombieJob: --- 10, [17930]
[2026-01-10 19:24:49] 2026-01-11 00:23:54,403 | INFO     | zombie collector waiting for pid 17930
[2026-01-10 19:24:49] 2026-01-11 00:23:54,403 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:24:49] 2026-01-11 00:23:54,403 | INFO     | collected zombie processes
[2026-01-10 19:24:49] 2026-01-11 00:23:54,403 | INFO     | will attempt to kill all subprocesses of pid=17930
[2026-01-10 19:24:49] 2026-01-11 00:23:54,516 | INFO     | process IDs to be killed: [17930] (in reverse order)
[2026-01-10 19:24:49] 2026-01-11 00:23:54,564 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:24:49] 2026-01-11 00:23:54,564 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:24:49] 2026-01-11 00:23:54,567 | INFO     | did not find any defunct processes belonging to 17930
[2026-01-10 19:24:49] 2026-01-11 00:23:54,570 | INFO     | did not find any defunct processes belonging to 17930
[2026-01-10 19:24:49] 2026-01-11 00:23:54,570 | INFO     | ready for new job
[2026-01-10 19:24:49] 2026-01-11 00:23:54,570 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:24:49] 2026-01-11 00:23:54,571 | INFO     | ***************************************
[2026-01-10 19:24:49] 2026-01-11 00:23:54,571 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:24:49] 2026-01-11 00:23:54,571 | INFO     | ***************************************
[2026-01-10 19:24:49] 2026-01-11 00:23:54,571 | INFO     | 
[2026-01-10 19:24:49] 2026-01-11 00:23:54,572 | INFO     | architecture information:
[2026-01-10 19:24:49] 2026-01-11 00:23:54,573 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:24:49] 2026-01-11 00:23:54,588 | INFO     | cat /etc/os-release:
[2026-01-10 19:24:49] NAME="CentOS Linux"
[2026-01-10 19:24:49] VERSION="7 (Core)"
[2026-01-10 19:24:49] ID="centos"
[2026-01-10 19:24:49] ID_LIKE="rhel fedora"
[2026-01-10 19:24:49] VERSION_ID="7"
[2026-01-10 19:24:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:24:49] ANSI_COLOR="0;31"
[2026-01-10 19:24:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:24:49] HOME_URL="https://www.centos.org/"
[2026-01-10 19:24:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:24:49] 
[2026-01-10 19:24:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:24:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:24:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:24:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:24:49] 
[2026-01-10 19:24:49] 2026-01-11 00:23:54,589 | INFO     | ***************************************
[2026-01-10 19:24:49] 2026-01-11 00:23:55,091 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 19:24:49] 2026-01-11 00:23:55,106 | INFO     | sufficient remaining disk space (28237103104 B)
[2026-01-10 19:24:49] 2026-01-11 00:23:55,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:24:49] 2026-01-11 00:23:55,106 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:24:49] 2026-01-11 00:23:55,106 | INFO     | update_server=False
[2026-01-10 19:24:49] 2026-01-11 00:23:55,106 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:24:49] 2026-01-11 00:23:55,107 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:24:49] 2026-01-11 00:23:55,107 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-10 19:24:49] 2026-01-11 00:23:55,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:24:49] 2026-01-11 00:23:55,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:24:49] 2026-01-11 00:23:55,108 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:24:49] 2026-01-11 00:23:55,108 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:24:49] 2026-01-11 00:23:55,108 | INFO     | aborting loop
[2026-01-10 19:24:49] 2026-01-11 00:23:55,109 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:24:49] 2026-01-11 00:23:55,109 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:24:49] 2026-01-11 00:23:56,112 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:24:49] 2026-01-11 00:23:56,113 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:24:49] 2026-01-11 00:23:56,114 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:24:49] 2026-01-11 00:23:56,128 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:24:49] 2026-01-11 00:23:56,190 | INFO     | all data control threads have been joined
[2026-01-10 19:24:49] 2026-01-11 00:23:56,197 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:24:49] 2026-01-11 00:23:56,234 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:24:49] 2026-01-11 00:23:56,276 | INFO     | all payload control threads have been joined
[2026-01-10 19:24:49] 2026-01-11 00:23:56,581 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:24:49] 2026-01-11 00:23:56,789 | INFO     | all job control threads have been joined
[2026-01-10 19:24:49] 2026-01-11 00:23:56,926 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:24:49] 2026-01-11 00:23:57,030 | INFO     | [job] validate thread has finished
[2026-01-10 19:24:49] 2026-01-11 00:23:57,114 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:24:49] 2026-01-11 00:23:57,138 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:24:49] 2026-01-11 00:23:57,196 | INFO     | [data] control thread has finished
[2026-01-10 19:24:49] 2026-01-11 00:23:57,282 | INFO     | [payload] control thread has finished
[2026-01-10 19:24:49] 2026-01-11 00:23:57,697 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:24:49] 2026-01-11 00:23:57,795 | INFO     | [job] control thread has finished
[2026-01-10 19:24:49] 2026-01-11 00:23:59,114 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:24:49] 2026-01-11 00:24:44,156 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:24:49] 2026-01-11 00:24:44,163 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140398324221760)>', '<ExcThread(monitor, started 140397875537664)>']
[2026-01-10 19:24:49] 2026-01-11 00:24:44,349 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:24:49] 2026-01-11 00:24:44,349 | INFO     | [monitor] control thread has ended
[2026-01-10 19:24:49] 2026-01-11 00:24:49,189 | INFO     | all workflow threads have been joined
[2026-01-10 19:24:49] 2026-01-11 00:24:49,197 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:24:49] 2026-01-11 00:24:49,198 | INFO     | traces error code: 0
[2026-01-10 19:24:49] 2026-01-11 00:24:49,198 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:24:49] 2026-01-11 00:24:49,291 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:24:49] 2026-01-11 00:24:49,295 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:24:49] 2026-01-11 00:24:49,300 [wrapper] pilotpid: 32185
[2026-01-10 19:24:49] 2026-01-11 00:24:49,304 [wrapper] Pilot exit status: 0
[2026-01-10 19:24:49] 2026-01-11 00:24:49,317 [wrapper] pandaids: 6965803328
[2026-01-10 19:24:49] 2026-01-11 00:24:49,361 [wrapper] cleanup supervisor_pilot  2557 32186
[2026-01-10 19:24:49] 2026-01-11 00:24:49,365 [wrapper] Test setup, not cleaning
[2026-01-10 19:24:49] 2026-01-11 00:24:49,369 [wrapper] apfmon messages muted
[2026-01-10 19:24:49] 2026-01-11 00:24:49,373 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:24:49] 2026-01-11 00:24:49,377 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:24:49]  *** Error codes and diagnostics ***
[2026-01-10 19:24:49]     "exeErrorCode": 0,
[2026-01-10 19:24:49]     "exeErrorDiag": "",
[2026-01-10 19:24:49]     "pilotErrorCode": 0,
[2026-01-10 19:24:49]     "pilotErrorDiag": "",
[2026-01-10 19:24:49]  *** Listing of results directory ***
[2026-01-10 19:24:49] total 434008
[2026-01-10 19:24:49] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:24:49] -rwx------ 1 boincer umatlas     36322 Jan 10 18:05 runpilot2-wrapper.sh
[2026-01-10 19:24:49] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 19:24:49] -rw-r--r-- 1 boincer umatlas       100 Jan 10 18:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:24:49] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 18:10 run_atlas
[2026-01-10 19:24:49] -rw-r--r-- 1 boincer umatlas       105 Jan 10 18:10 job.xml
[2026-01-10 19:24:49] -rw-r--r-- 2 boincer umatlas 392436403 Jan 10 18:10 EVNT.47962006._000092.pool.root.1
[2026-01-10 19:24:49] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 19:24:49] drwxrwx--x 2 boincer umatlas      4096 Jan 10 18:10 shared
[2026-01-10 19:24:49] -rw-r--r-- 2 boincer umatlas    592611 Jan 10 18:10 input.tar.gz
[2026-01-10 19:24:49] -rw-r--r-- 1 boincer umatlas         0 Jan 10 18:10 boinc_lockfile
[2026-01-10 19:24:49] -rw-r--r-- 1 boincer umatlas      2890 Jan 10 18:10 pandaJob.out
[2026-01-10 19:24:49] -rw------- 1 boincer umatlas        57 Jan 10 18:10 setup.sh.local
[2026-01-10 19:24:49] -rw------- 1 boincer umatlas    989548 Jan 10 18:10 agis_schedconf.cvmfs.json
[2026-01-10 19:24:49] -rw------- 1 boincer umatlas   1516240 Jan 10 18:10 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:24:49] drwx------ 5 boincer umatlas      4096 Jan 10 18:10 pilot3
[2026-01-10 19:24:49] -rw-r--r-- 1 boincer umatlas       529 Jan 10 19:17 boinc_task_state.xml
[2026-01-10 19:24:49] -rw-r--r-- 1 boincer umatlas      5951 Jan 10 19:18 init_data.xml
[2026-01-10 19:24:49] -rw------- 1 boincer umatlas        95 Jan 10 19:23 pilot_heartbeat.json
[2026-01-10 19:24:49] -rw------- 1 boincer umatlas  44347322 Jan 10 19:23 HITS.47962010._002780.pool.root.1
[2026-01-10 19:24:49] -rw------- 1 boincer umatlas      1050 Jan 10 19:23 memory_monitor_summary.json
[2026-01-10 19:24:49] -rw------- 1 boincer umatlas   1201771 Jan 10 19:23 log.47962010._002780.job.log.tgz.1
[2026-01-10 19:24:49] -rw------- 1 boincer umatlas      8593 Jan 10 19:23 heartbeat.json
[2026-01-10 19:24:49] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 19:24 boinc_mmap_file
[2026-01-10 19:24:49] -rw-r--r-- 1 boincer umatlas        27 Jan 10 19:24 wrapper_checkpoint.txt
[2026-01-10 19:24:49] -rw------- 1 boincer umatlas      4552 Jan 10 19:24 pilotlog.txt
[2026-01-10 19:24:49] -rw------- 1 boincer umatlas    659038 Jan 10 19:24 log.47962010._002780.job.log.1
[2026-01-10 19:24:49] -rw------- 1 boincer umatlas       353 Jan 10 19:24 output.list
[2026-01-10 19:24:49] -rw-r--r-- 1 boincer umatlas       620 Jan 10 19:24 runtime_log
[2026-01-10 19:24:49] -rw------- 1 boincer umatlas   1884160 Jan 10 19:24 result.tar.gz
[2026-01-10 19:24:49] -rw-r--r-- 1 boincer umatlas      9342 Jan 10 19:24 runtime_log.err
[2026-01-10 19:24:49] -rw------- 1 boincer umatlas       658 Jan 10 19:24 EukKDmJCxy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmehKDmr7GYBn.diag
[2026-01-10 19:24:49] -rw-r--r-- 1 boincer umatlas     21472 Jan 10 19:24 stderr.txt
[2026-01-10 19:24:49] HITS file was successfully produced:
[2026-01-10 19:24:49] -rw------- 1 boincer umatlas 44347322 Jan 10 19:23 shared/HITS.pool.root.1
[2026-01-10 19:24:49]  *** Contents of shared directory: ***
[2026-01-10 19:24:49] total 428988
[2026-01-10 19:24:49] -rw-r--r-- 2 boincer umatlas 392436403 Jan 10 18:10 ATLAS.root_0
[2026-01-10 19:24:49] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 19:24:49] -rw-r--r-- 2 boincer umatlas    592611 Jan 10 18:10 input.tar.gz
[2026-01-10 19:24:49] -rw------- 1 boincer umatlas  44347322 Jan 10 19:23 HITS.pool.root.1
[2026-01-10 19:24:49] -rw------- 1 boincer umatlas   1884160 Jan 10 19:24 result.tar.gz
19:24:50 (28477): run_atlas exited; CPU time 30723.389273
19:24:50 (28477): called boinc_finish(0)

</stderr_txt>
]]>

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