Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:10:32 (908858): wrapper (7.7.26015): starting
18:10:32 (908858): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 18:10:32] Arguments: --nthreads 11
[2026-01-10 18:10:32] Threads: 11
[2026-01-10 18:10:32] Checking for CVMFS
[2026-01-10 18:10:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:10:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:10:32] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:10:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:10:32] 2.13.3.0 7347 24957 161816 154994 0 340 27981568 40960000 18647 16776704 0 41172321 99.794 18801691 40347 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 18:10:32] CVMFS is ok
[2026-01-10 18:10:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:10:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:10:32] Further information can be found at the LHC@home message board.
[2026-01-10 18:10:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:10:32] Checking for apptainer binary...
[2026-01-10 18:10:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:10:32] Running /usr/bin/apptainer --version
[2026-01-10 18:10:32] apptainer version 1.4.5-2.el9
[2026-01-10 18:10:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:10:32] c-212-2.aglt2.org
[2026-01-10 18:10:32] apptainer works
[2026-01-10 18:10:33] Set ATHENA_PROC_NUMBER=11
[2026-01-10 18:10:33] Set ATHENA_CORE_NUMBER=11
[2026-01-10 18:10:33] Starting ATLAS job with PandaID=6965803364
[2026-01-10 18:10:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:17:58]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:17:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/22/80/log.47962010._002816.job.log.tgz.1
[2026-01-10 19:17:58]  workdir=None
[2026-01-10 19:17:58] ]
[2026-01-10 19:17:58] 2026-01-11 00:16:52,880 | INFO     | transferring file log.47962010._002816.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6965803364/log.47962010._002816.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 19:17:58] 2026-01-11 00:16:52,881 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6965803364/log.47962010._002816.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._002816.job
[2026-01-10 19:17:58] 2026-01-11 00:16:52,899 | INFO     | adding to output.list: log.47962010._002816.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/22/80/log.47962010._002816.job.log.tgz.
[2026-01-10 19:17:58] 2026-01-11 00:16:52,900 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 19:17:58] 2026-01-11 00:16:52,900 | INFO     | summary of transferred files:
[2026-01-10 19:17:58] 2026-01-11 00:16:52,900 | INFO     |  -- lfn=log.47962010._002816.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 19:17:58] 2026-01-11 00:16:52,900 | INFO     | stage-out finished correctly
[2026-01-10 19:17:58] 2026-01-11 00:16:54,418 | INFO     | time since job start (3969s) is within the limit (349056.0s)
[2026-01-10 19:17:58] 2026-01-11 00:16:55,548 | WARNING  | process 926100 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 19:17:58] 2026-01-11 00:16:55,548 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965803364/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:17:58] 2026-01-11 00:16:55,900 | INFO     | number of running child processes to parent process 926100: 1
[2026-01-10 19:17:58] 2026-01-11 00:16:55,900 | INFO     | maximum number of monitored processes: 16
[2026-01-10 19:17:58] 2026-01-11 00:16:56,217 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 19:17:58] 2026-01-11 00:16:56,428 | INFO     | time since job start (3971s) is within the limit (349056.0s)
[2026-01-10 19:17:58] 2026-01-11 00:16:57,860 | INFO     | PID=912526 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:17:58] 2026-01-11 00:16:57,860 | INFO     | .. there are 13 such processes running
[2026-01-10 19:17:58] 2026-01-11 00:16:58,403 | INFO     | monitor loop #288: job 0:6965803364 is in state 'finished'
[2026-01-10 19:17:58] 2026-01-11 00:16:58,403 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:17:58] 2026-01-11 00:16:58,861 | INFO     | time since job start (3973s) is within the limit (349056.0s)
[2026-01-10 19:17:58] 2026-01-11 00:16:59,110 | INFO     | job 6965803364 has state=finished
[2026-01-10 19:17:58] 2026-01-11 00:16:59,110 | INFO     | preparing for final server update for job 6965803364 in state='finished'
[2026-01-10 19:17:58] 2026-01-11 00:16:59,110 | INFO     | this job has now completed (state=finished)
[2026-01-10 19:17:58] 2026-01-11 00:16:59,110 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 19:17:58] 2026-01-11 00:16:59,111 | INFO     | log transfer has been attempted: DONE
[2026-01-10 19:17:58] 2026-01-11 00:16:59,111 | INFO     | job 6965803364 has finished - writing final server update
[2026-01-10 19:17:58] 2026-01-11 00:16:59,111 | INFO     | total number of processed events: 50 (read)
[2026-01-10 19:17:58] 2026-01-11 00:16:59,123 | INFO     | executing command: lscpu
[2026-01-10 19:17:58] 2026-01-11 00:16:59,191 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 19:17:58] 2026-01-11 00:17:00,867 | INFO     | time since job start (3975s) is within the limit (349056.0s)
[2026-01-10 19:17:58] 2026-01-11 00:17:00,907 | INFO     | monitor loop #289: job 0:6965803364 is in state 'finished'
[2026-01-10 19:17:58] 2026-01-11 00:17:00,907 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:17:58] 2026-01-11 00:17:02,874 | INFO     | time since job start (3977s) is within the limit (349056.0s)
[2026-01-10 19:17:58] 2026-01-11 00:17:03,411 | INFO     | monitor loop #290: job 0:6965803364 is in state 'finished'
[2026-01-10 19:17:58] 2026-01-11 00:17:03,411 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:17:58] 2026-01-11 00:17:03,543 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 19:17:58] 2026-01-11 00:17:03,549 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3209.1752604166654
[2026-01-10 19:17:58] 2026-01-11 00:17:03,563 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965803364/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:17:58] 2026-01-11 00:17:03,564 | INFO     | extracted standard info from prmon json
[2026-01-10 19:17:58] 2026-01-11 00:17:03,564 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:17:58] 2026-01-11 00:17:03,564 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:17:58] 2026-01-11 00:17:03,566 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:17:58] 2026-01-11 00:17:03,566 | INFO     | sum of square deviations: 60476164.43103448
[2026-01-10 19:17:58] 2026-01-11 00:17:03,567 | INFO     | sum of deviations: 6650918568.258619
[2026-01-10 19:17:58] 2026-01-11 00:17:03,567 | INFO     | mean x: 1768088715.4655173
[2026-01-10 19:17:58] 2026-01-11 00:17:03,567 | INFO     | mean y: 2782188.879310345
[2026-01-10 19:17:58] 2026-01-11 00:17:03,567 | INFO     | intersect: -194444305827.562
[2026-01-10 19:17:58] 2026-01-11 00:17:03,567 | INFO     | chi2: 0.24400091957659117
[2026-01-10 19:17:58] 2026-01-11 00:17:03,567 | INFO     | current memory leak: 109.98 B/s (using 58 data points, chi2=0.24)
[2026-01-10 19:17:58] 2026-01-11 00:17:03,568 | INFO     | could have reported an average CPU frequency of 3163 MHz (6 samples)
[2026-01-10 19:17:58] 2026-01-11 00:17:03,568 | INFO     | ..............................
[2026-01-10 19:17:58] 2026-01-11 00:17:03,568 | INFO     | . Timing measurements:
[2026-01-10 19:17:58] 2026-01-11 00:17:03,568 | INFO     | . get job = 0 s
[2026-01-10 19:17:58] 2026-01-11 00:17:03,568 | INFO     | . initial setup = 2 s
[2026-01-10 19:17:58] 2026-01-11 00:17:03,568 | INFO     | . payload setup = 5 s
[2026-01-10 19:17:58] 2026-01-11 00:17:03,568 | INFO     | . stage-in = 0 s
[2026-01-10 19:17:58] 2026-01-11 00:17:03,568 | INFO     | . payload execution = 3941 s
[2026-01-10 19:17:58] 2026-01-11 00:17:03,568 | INFO     | . stage-out = 0 s
[2026-01-10 19:17:58] 2026-01-11 00:17:03,568 | INFO     | . log creation = 0 s
[2026-01-10 19:17:58] 2026-01-11 00:17:03,568 | INFO     | ..............................
[2026-01-10 19:17:58] 2026-01-11 00:17:03,644 | INFO     | 
[2026-01-10 19:17:58] 2026-01-11 00:17:03,645 | INFO     | job summary report
[2026-01-10 19:17:58] 2026-01-11 00:17:03,645 | INFO     | --------------------------------------------------
[2026-01-10 19:17:58] 2026-01-11 00:17:03,645 | INFO     | PanDA job id: 6965803364
[2026-01-10 19:17:58] 2026-01-11 00:17:03,645 | INFO     | task id: 47962010
[2026-01-10 19:17:58] 2026-01-11 00:17:03,645 | INFO     | errors: (none)
[2026-01-10 19:17:58] 2026-01-11 00:17:03,645 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:17:58] 2026-01-11 00:17:03,645 | INFO     | pilot state: finished 
[2026-01-10 19:17:58] 2026-01-11 00:17:03,645 | INFO     | transexitcode: 0
[2026-01-10 19:17:58] 2026-01-11 00:17:03,645 | INFO     | exeerrorcode: 0
[2026-01-10 19:17:58] 2026-01-11 00:17:03,645 | INFO     | exeerrordiag: 
[2026-01-10 19:17:58] 2026-01-11 00:17:03,645 | INFO     | exitcode: 0
[2026-01-10 19:17:58] 2026-01-11 00:17:03,645 | INFO     | exitmsg: OK
[2026-01-10 19:17:58] 2026-01-11 00:17:03,645 | INFO     | cpuconsumptiontime: 11779 s
[2026-01-10 19:17:58] 2026-01-11 00:17:03,645 | INFO     | nevents: 50
[2026-01-10 19:17:58] 2026-01-11 00:17:03,645 | INFO     | neventsw: 0
[2026-01-10 19:17:58] 2026-01-11 00:17:03,645 | INFO     | pid: 926100
[2026-01-10 19:17:58] 2026-01-11 00:17:03,645 | INFO     | pgrp: 926100
[2026-01-10 19:17:58] 2026-01-11 00:17:03,646 | INFO     | corecount: 11
[2026-01-10 19:17:58] 2026-01-11 00:17:03,646 | INFO     | event service: False
[2026-01-10 19:17:58] 2026-01-11 00:17:03,646 | INFO     | sizes: {0: 2284569, 4: 2284831, 11: 2284859, 3951: 2311559, 3952: 2320553, 3956: 2320609, 3963: 2320983}
[2026-01-10 19:17:58] 2026-01-11 00:17:03,646 | INFO     | --------------------------------------------------
[2026-01-10 19:17:58] 2026-01-11 00:17:03,646 | INFO     | 
[2026-01-10 19:17:58] 2026-01-11 00:17:03,646 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 19:17:58] 2026-01-11 00:17:03,669 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:17:58] 2026-01-11 00:17:03,669 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:17:58] 2026-01-11 00:17:03,669 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:17:58] 2026-01-11 00:17:03,669 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:17:58] 2026-01-11 00:17:03,669 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:17:58] 2026-01-11 00:17:03,669 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:17:58] 2026-01-11 00:17:03,669 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:17:58] 2026-01-11 00:17:03,669 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:17:58] 2026-01-11 00:17:03,669 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:17:58] 2026-01-11 00:17:03,669 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:17:58] 2026-01-11 00:17:03,669 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:17:58] 2026-01-11 00:17:03,670 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:17:58] 2026-01-11 00:17:03,670 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:17:58] 2026-01-11 00:17:03,670 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:17:58] 2026-01-11 00:17:03,670 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:17:58] 2026-01-11 00:17:03,670 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:17:58] 2026-01-11 00:17:03,670 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:17:58] 2026-01-11 00:17:03,670 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:17:58] 2026-01-11 00:17:03,670 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:17:58] 2026-01-11 00:17:03,670 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:17:58] 2026-01-11 00:17:03,670 | INFO     | job 6965803364 has completed (purged errors)
[2026-01-10 19:17:58] 2026-01-11 00:17:03,670 | INFO     | overall cleanup function is called
[2026-01-10 19:17:58] 2026-01-11 00:17:04,688 | INFO     | --- collectZombieJob: --- 10, [926100]
[2026-01-10 19:17:58] 2026-01-11 00:17:04,688 | INFO     | zombie collector waiting for pid 926100
[2026-01-10 19:17:58] 2026-01-11 00:17:04,688 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:17:58] 2026-01-11 00:17:04,688 | INFO     | collected zombie processes
[2026-01-10 19:17:58] 2026-01-11 00:17:04,688 | INFO     | will attempt to kill all subprocesses of pid=926100
[2026-01-10 19:17:58] 2026-01-11 00:17:05,016 | INFO     | process IDs to be killed: [926100] (in reverse order)
[2026-01-10 19:17:58] 2026-01-11 00:17:05,132 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:17:58] 2026-01-11 00:17:05,133 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:17:58] 2026-01-11 00:17:05,147 | INFO     | did not find any defunct processes belonging to 926100
[2026-01-10 19:17:58] 2026-01-11 00:17:05,161 | INFO     | did not find any defunct processes belonging to 926100
[2026-01-10 19:17:58] 2026-01-11 00:17:05,162 | INFO     | ready for new job
[2026-01-10 19:17:58] 2026-01-11 00:17:05,162 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:17:58] 2026-01-11 00:17:05,164 | INFO     | ***************************************
[2026-01-10 19:17:58] 2026-01-11 00:17:05,164 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:17:58] 2026-01-11 00:17:05,164 | INFO     | ***************************************
[2026-01-10 19:17:58] 2026-01-11 00:17:05,164 | INFO     | 
[2026-01-10 19:17:58] 2026-01-11 00:17:05,169 | INFO     | architecture information:
[2026-01-10 19:17:58] 2026-01-11 00:17:05,170 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:17:58] 2026-01-11 00:17:05,191 | INFO     | cat /etc/os-release:
[2026-01-10 19:17:58] NAME="CentOS Linux"
[2026-01-10 19:17:58] VERSION="7 (Core)"
[2026-01-10 19:17:58] ID="centos"
[2026-01-10 19:17:58] ID_LIKE="rhel fedora"
[2026-01-10 19:17:58] VERSION_ID="7"
[2026-01-10 19:17:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:17:58] ANSI_COLOR="0;31"
[2026-01-10 19:17:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:17:58] HOME_URL="https://www.centos.org/"
[2026-01-10 19:17:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:17:58] 
[2026-01-10 19:17:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:17:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:17:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:17:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:17:58] 
[2026-01-10 19:17:58] 2026-01-11 00:17:05,192 | INFO     | ***************************************
[2026-01-10 19:17:58] 2026-01-11 00:17:05,693 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 19:17:58] 2026-01-11 00:17:05,713 | INFO     | sufficient remaining disk space (129608187904 B)
[2026-01-10 19:17:58] 2026-01-11 00:17:05,713 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:17:58] 2026-01-11 00:17:05,713 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:17:58] 2026-01-11 00:17:05,713 | INFO     | update_server=False
[2026-01-10 19:17:58] 2026-01-11 00:17:05,713 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:17:58] 2026-01-11 00:17:05,915 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 19:17:58] 2026-01-11 00:17:05,915 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 19:17:58] 2026-01-11 00:17:05,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:17:58] 2026-01-11 00:17:05,915 | INFO     | will abort loop
[2026-01-10 19:17:58] 2026-01-11 00:17:05,967 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:17:58] 2026-01-11 00:17:06,394 | INFO     | all payload control threads have been joined
[2026-01-10 19:17:58] 2026-01-11 00:17:06,621 | INFO     | all data control threads have been joined
[2026-01-10 19:17:58] 2026-01-11 00:17:06,718 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:17:58] 2026-01-11 00:17:06,736 | INFO     | all job control threads have been joined
[2026-01-10 19:17:58] 2026-01-11 00:17:06,806 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:17:58] 2026-01-11 00:17:06,918 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:17:58] 2026-01-11 00:17:06,921 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:17:58] 2026-01-11 00:17:07,230 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:17:58] 2026-01-11 00:17:07,399 | INFO     | [payload] control thread has finished
[2026-01-10 19:17:58] 2026-01-11 00:17:07,416 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:17:58] 2026-01-11 00:17:07,627 | INFO     | [data] control thread has finished
[2026-01-10 19:17:58] 2026-01-11 00:17:07,685 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:17:58] 2026-01-11 00:17:07,742 | INFO     | [job] control thread has finished
[2026-01-10 19:17:58] 2026-01-11 00:17:07,842 | INFO     | [job] validate thread has finished
[2026-01-10 19:17:58] 2026-01-11 00:17:07,858 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:17:58] 2026-01-11 00:17:07,973 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:17:58] 2026-01-11 00:17:08,116 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:17:58] 2026-01-11 00:17:08,660 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:17:58] 2026-01-11 00:17:09,662 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:17:58] 2026-01-11 00:17:10,811 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:17:58] 2026-01-11 00:17:15,976 | INFO     | job.realtimelogging is not enabled
[2026-01-10 19:17:58] 2026-01-11 00:17:16,982 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:17:58] 2026-01-11 00:17:36,333 | INFO     | PID=912526 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 19:17:58] 2026-01-11 00:17:36,334 | INFO     | .. there are 13 such processes running
[2026-01-10 19:17:58] 2026-01-11 00:17:36,334 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:17:58] 2026-01-11 00:17:36,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:17:58] 2026-01-11 00:17:36,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:17:58] 2026-01-11 00:17:51,709 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:17:58] 2026-01-11 00:17:53,120 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140150753539904)>', '<ExcThread(monitor, started 140150369654528)>']
[2026-01-10 19:17:58] 2026-01-11 00:17:53,401 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:17:58] 2026-01-11 00:17:53,401 | INFO     | [monitor] control thread has ended
[2026-01-10 19:17:58] 2026-01-11 00:17:58,147 | INFO     | all workflow threads have been joined
[2026-01-10 19:17:58] 2026-01-11 00:17:58,147 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:17:58] 2026-01-11 00:17:58,147 | INFO     | traces error code: 0
[2026-01-10 19:17:58] 2026-01-11 00:17:58,148 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:17:58] 2026-01-11 00:17:58,350 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:17:58] 2026-01-11 00:17:58,354 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:17:58] 2026-01-11 00:17:58,356 [wrapper] pilotpid: 912526
[2026-01-10 19:17:58] 2026-01-11 00:17:58,359 [wrapper] Pilot exit status: 0
[2026-01-10 19:17:58] 2026-01-11 00:17:58,370 [wrapper] pandaids: 6965803364
[2026-01-10 19:17:58] 2026-01-11 00:17:58,454 [wrapper] cleanup supervisor_pilot 1053623 912527
[2026-01-10 19:17:58] 2026-01-11 00:17:58,458 [wrapper] Test setup, not cleaning
[2026-01-10 19:17:58] 2026-01-11 00:17:58,462 [wrapper] apfmon messages muted
[2026-01-10 19:17:58] 2026-01-11 00:17:58,465 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:17:58] 2026-01-11 00:17:58,468 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:17:58]  *** Error codes and diagnostics ***
[2026-01-10 19:17:58]     "exeErrorCode": 0,
[2026-01-10 19:17:58]     "exeErrorDiag": "",
[2026-01-10 19:17:58]     "pilotErrorCode": 0,
[2026-01-10 19:17:58]     "pilotErrorDiag": "",
[2026-01-10 19:17:58]  *** Listing of results directory ***
[2026-01-10 19:17:58] total 440364
[2026-01-10 19:17:58] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 19:17:58] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:03 queuedata.json
[2026-01-10 19:17:58] -rwx------. 1 boincer umatlas     36322 Jan 10 18:04 runpilot2-wrapper.sh
[2026-01-10 19:17:58] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:17:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:10 run_atlas
[2026-01-10 19:17:58] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:10 job.xml
[2026-01-10 19:17:58] -rw-r--r--. 2 boincer umatlas 396184497 Jan 10 18:10 EVNT.47962006._000013.pool.root.1
[2026-01-10 19:17:58] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 19:17:58] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:10 shared
[2026-01-10 19:17:58] -rw-r--r--. 2 boincer umatlas    592619 Jan 10 18:10 input.tar.gz
[2026-01-10 19:17:58] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:10 boinc_lockfile
[2026-01-10 19:17:58] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 18:10 pandaJob.out
[2026-01-10 19:17:58] -rw-------. 1 boincer umatlas        57 Jan 10 18:10 setup.sh.local
[2026-01-10 19:17:58] -rw-------. 1 boincer umatlas    989548 Jan 10 18:10 agis_schedconf.cvmfs.json
[2026-01-10 19:17:58] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:10 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:17:58] drwx------. 5 boincer umatlas      4096 Jan 10 18:10 pilot3
[2026-01-10 19:17:58] -rw-r--r--. 1 boincer umatlas       530 Jan 10 19:11 boinc_task_state.xml
[2026-01-10 19:17:58] -rw-r--r--. 1 boincer umatlas      6956 Jan 10 19:13 init_data.xml
[2026-01-10 19:17:58] -rw-------. 1 boincer umatlas  46574347 Jan 10 19:16 HITS.47962010._002816.pool.root.1
[2026-01-10 19:17:58] -rw-------. 1 boincer umatlas      1034 Jan 10 19:16 memory_monitor_summary.json
[2026-01-10 19:17:58] -rw-------. 1 boincer umatlas   1528054 Jan 10 19:16 log.47962010._002816.job.log.tgz.1
[2026-01-10 19:17:58] -rw-------. 1 boincer umatlas        95 Jan 10 19:16 pilot_heartbeat.json
[2026-01-10 19:17:58] -rw-------. 1 boincer umatlas      8520 Jan 10 19:17 heartbeat.json
[2026-01-10 19:17:58] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 19:17 boinc_mmap_file
[2026-01-10 19:17:58] -rw-r--r--. 1 boincer umatlas        27 Jan 10 19:17 wrapper_checkpoint.txt
[2026-01-10 19:17:58] -rw-------. 1 boincer umatlas      5082 Jan 10 19:17 pilotlog.txt
[2026-01-10 19:17:58] -rw-------. 1 boincer umatlas    597882 Jan 10 19:17 log.47962010._002816.job.log.1
[2026-01-10 19:17:58] -rw-------. 1 boincer umatlas       353 Jan 10 19:17 output.list
[2026-01-10 19:17:58] -rw-r--r--. 1 boincer umatlas       620 Jan 10 19:17 runtime_log
[2026-01-10 19:17:58] -rw-------. 1 boincer umatlas   2150400 Jan 10 19:17 result.tar.gz
[2026-01-10 19:17:58] -rw-r--r--. 1 boincer umatlas      9339 Jan 10 19:17 runtime_log.err
[2026-01-10 19:17:58] -rw-------. 1 boincer umatlas       653 Jan 10 19:17 mTfKDm2Bxy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUwmKDmbaatJm.diag
[2026-01-10 19:17:58] -rw-r--r--. 1 boincer umatlas     22455 Jan 10 19:17 stderr.txt
[2026-01-10 19:17:58] HITS file was successfully produced:
[2026-01-10 19:17:58] -rw-------. 1 boincer umatlas 46574347 Jan 10 19:16 shared/HITS.pool.root.1
[2026-01-10 19:17:58]  *** Contents of shared directory: ***
[2026-01-10 19:17:58] total 435084
[2026-01-10 19:17:58] -rw-r--r--. 2 boincer umatlas 396184497 Jan 10 18:10 ATLAS.root_0
[2026-01-10 19:17:58] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 19:17:58] -rw-r--r--. 2 boincer umatlas    592619 Jan 10 18:10 input.tar.gz
[2026-01-10 19:17:58] -rw-------. 1 boincer umatlas  46574347 Jan 10 19:16 HITS.pool.root.1
[2026-01-10 19:17:58] -rw-------. 1 boincer umatlas   2150400 Jan 10 19:17 result.tar.gz
19:18:00 (908858): run_atlas exited; CPU time 11702.137813
19:18:00 (908858): called boinc_finish(0)

</stderr_txt>
]]>

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