Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:10:51 (914640): wrapper (7.7.26015): starting
18:10:51 (914640): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 18:10:51] Arguments: --nthreads 11
[2026-01-10 18:10:51] Threads: 11
[2026-01-10 18:10:51] Checking for CVMFS
[2026-01-10 18:10:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:10:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:10:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:10:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:10:51] 2.13.3.0 7347 24958 154828 154996 3 25 27987068 40960000 18739 16776704 0 41187648 99.794 18803028 40347 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 18:10:51] CVMFS is ok
[2026-01-10 18:10:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:10:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:10:51] Further information can be found at the LHC@home message board.
[2026-01-10 18:10:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:10:51] Checking for apptainer binary...
[2026-01-10 18:10:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:10:51] Running /usr/bin/apptainer --version
[2026-01-10 18:10:51] apptainer version 1.4.5-2.el9
[2026-01-10 18:10:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:10:51] c-212-2.aglt2.org
[2026-01-10 18:10:51] apptainer works
[2026-01-10 18:10:51] Set ATHENA_PROC_NUMBER=11
[2026-01-10 18:10:51] Set ATHENA_CORE_NUMBER=11
[2026-01-10 18:10:51] Starting ATLAS job with PandaID=6965803375
[2026-01-10 18:10:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 18:59:12]  *** The last 200 lines of the pilot log: ***
[2026-01-10 18:59:12]  storage_token=
[2026-01-10 18:59:12]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6965803375/log.47962010._002827.job.log.tgz.1
[2026-01-10 18:59:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/3c/e1/log.47962010._002827.job.log.tgz.1
[2026-01-10 18:59:12]  workdir=None
[2026-01-10 18:59:12] ]
[2026-01-10 18:59:12] 2026-01-10 23:58:05,756 | INFO     | transferring file log.47962010._002827.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6965803375/log.47962010._002827.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 18:59:12] 2026-01-10 23:58:05,756 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6965803375/log.47962010._002827.job.log.tgz.1 /tmp/boinchome/slots/1/log.47962010._002827.job
[2026-01-10 18:59:12] 2026-01-10 23:58:05,776 | INFO     | adding to output.list: log.47962010._002827.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/3c/e1/log.47962010._002827.job.log.tgz.
[2026-01-10 18:59:12] 2026-01-10 23:58:05,777 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 18:59:12] 2026-01-10 23:58:05,777 | INFO     | summary of transferred files:
[2026-01-10 18:59:12] 2026-01-10 23:58:05,777 | INFO     |  -- lfn=log.47962010._002827.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 18:59:12] 2026-01-10 23:58:05,778 | INFO     | stage-out finished correctly
[2026-01-10 18:59:12] 2026-01-10 23:58:05,936 | INFO     | PID=919293 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 18:59:12] 2026-01-10 23:58:05,936 | INFO     | .. there are 14 such processes running
[2026-01-10 18:59:12] 2026-01-10 23:58:06,937 | INFO     | time since job start (2825s) is within the limit (349056.0s)
[2026-01-10 18:59:12] 2026-01-10 23:58:07,017 | WARNING  | process 941256 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 18:59:12] 2026-01-10 23:58:07,019 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965803375/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 18:59:12] 2026-01-10 23:58:07,019 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965803375/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 18:59:12] 2026-01-10 23:58:07,020 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-10 18:59:12] 2026-01-10 23:58:07,020 | WARNING  | maxPSS not found in memory monitor output
[2026-01-10 18:59:12] 2026-01-10 23:58:07,331 | INFO     | number of running child processes to parent process 941256: 1
[2026-01-10 18:59:12] 2026-01-10 23:58:07,331 | INFO     | maximum number of monitored processes: 16
[2026-01-10 18:59:12] 2026-01-10 23:58:08,946 | INFO     | time since job start (2827s) is within the limit (349056.0s)
[2026-01-10 18:59:12] 2026-01-10 23:58:09,072 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 18:59:12] 2026-01-10 23:58:09,141 | INFO     | job 6965803375 has state=finished
[2026-01-10 18:59:12] 2026-01-10 23:58:09,141 | INFO     | preparing for final server update for job 6965803375 in state='finished'
[2026-01-10 18:59:12] 2026-01-10 23:58:09,141 | INFO     | this job has now completed (state=finished)
[2026-01-10 18:59:12] 2026-01-10 23:58:09,142 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 18:59:12] 2026-01-10 23:58:09,142 | INFO     | log transfer has been attempted: DONE
[2026-01-10 18:59:12] 2026-01-10 23:58:09,142 | INFO     | job 6965803375 has finished - writing final server update
[2026-01-10 18:59:12] 2026-01-10 23:58:09,142 | INFO     | total number of processed events: 50 (read)
[2026-01-10 18:59:12] 2026-01-10 23:58:09,143 | INFO     | executing command: lscpu
[2026-01-10 18:59:12] 2026-01-10 23:58:09,208 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 18:59:12] 2026-01-10 23:58:09,835 | INFO     | monitor loop #205: job 0:6965803375 is in state 'finished'
[2026-01-10 18:59:12] 2026-01-10 23:58:09,836 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:59:12] 2026-01-10 23:58:10,951 | INFO     | time since job start (2829s) is within the limit (349056.0s)
[2026-01-10 18:59:12] 2026-01-10 23:58:12,340 | INFO     | monitor loop #206: job 0:6965803375 is in state 'finished'
[2026-01-10 18:59:12] 2026-01-10 23:58:12,340 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:59:12] 2026-01-10 23:58:12,957 | INFO     | time since job start (2831s) is within the limit (349056.0s)
[2026-01-10 18:59:12] 2026-01-10 23:58:13,176 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 18:59:12] 2026-01-10 23:58:13,181 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3110.262989583333
[2026-01-10 18:59:12] 2026-01-10 23:58:13,195 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965803375/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 18:59:12] 2026-01-10 23:58:13,195 | INFO     | extracted standard info from prmon json
[2026-01-10 18:59:12] 2026-01-10 23:58:13,195 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 18:59:12] 2026-01-10 23:58:13,195 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 18:59:12] 2026-01-10 23:58:13,197 | INFO     | fitting pss+swap vs Time
[2026-01-10 18:59:12] 2026-01-10 23:58:13,197 | INFO     | sum of square deviations: 18367055.43589743
[2026-01-10 18:59:12] 2026-01-10 23:58:13,197 | INFO     | sum of deviations: 738478019.9230764
[2026-01-10 18:59:12] 2026-01-10 23:58:13,197 | INFO     | mean x: 1768088152.7435896
[2026-01-10 18:59:12] 2026-01-10 23:58:13,197 | INFO     | mean y: 2749199.6923076925
[2026-01-10 18:59:12] 2026-01-10 23:58:13,197 | INFO     | intersect: -71086176439.17882
[2026-01-10 18:59:12] 2026-01-10 23:58:13,197 | INFO     | chi2: 0.27152579387864684
[2026-01-10 18:59:12] 2026-01-10 23:58:13,197 | INFO     | current memory leak: 40.21 B/s (using 39 data points, chi2=0.27)
[2026-01-10 18:59:12] 2026-01-10 23:58:13,198 | INFO     | could have reported an average CPU frequency of 3163 MHz (5 samples)
[2026-01-10 18:59:12] 2026-01-10 23:58:13,198 | INFO     | ..............................
[2026-01-10 18:59:12] 2026-01-10 23:58:13,198 | INFO     | . Timing measurements:
[2026-01-10 18:59:12] 2026-01-10 23:58:13,198 | INFO     | . get job = 0 s
[2026-01-10 18:59:12] 2026-01-10 23:58:13,198 | INFO     | . initial setup = 2 s
[2026-01-10 18:59:12] 2026-01-10 23:58:13,198 | INFO     | . payload setup = 5 s
[2026-01-10 18:59:12] 2026-01-10 23:58:13,198 | INFO     | . stage-in = 0 s
[2026-01-10 18:59:12] 2026-01-10 23:58:13,198 | INFO     | . payload execution = 2797 s
[2026-01-10 18:59:12] 2026-01-10 23:58:13,198 | INFO     | . stage-out = 0 s
[2026-01-10 18:59:12] 2026-01-10 23:58:13,198 | INFO     | . log creation = 0 s
[2026-01-10 18:59:12] 2026-01-10 23:58:13,198 | INFO     | ..............................
[2026-01-10 18:59:12] 2026-01-10 23:58:13,269 | INFO     | 
[2026-01-10 18:59:12] 2026-01-10 23:58:13,269 | INFO     | job summary report
[2026-01-10 18:59:12] 2026-01-10 23:58:13,269 | INFO     | --------------------------------------------------
[2026-01-10 18:59:12] 2026-01-10 23:58:13,269 | INFO     | PanDA job id: 6965803375
[2026-01-10 18:59:12] 2026-01-10 23:58:13,269 | INFO     | task id: 47962010
[2026-01-10 18:59:12] 2026-01-10 23:58:13,269 | INFO     | errors: (none)
[2026-01-10 18:59:12] 2026-01-10 23:58:13,270 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 18:59:12] 2026-01-10 23:58:13,270 | INFO     | pilot state: finished 
[2026-01-10 18:59:12] 2026-01-10 23:58:13,270 | INFO     | transexitcode: 0
[2026-01-10 18:59:12] 2026-01-10 23:58:13,270 | INFO     | exeerrorcode: 0
[2026-01-10 18:59:12] 2026-01-10 23:58:13,270 | INFO     | exeerrordiag: 
[2026-01-10 18:59:12] 2026-01-10 23:58:13,270 | INFO     | exitcode: 0
[2026-01-10 18:59:12] 2026-01-10 23:58:13,270 | INFO     | exitmsg: OK
[2026-01-10 18:59:12] 2026-01-10 23:58:13,270 | INFO     | cpuconsumptiontime: 12086 s
[2026-01-10 18:59:12] 2026-01-10 23:58:13,270 | INFO     | nevents: 50
[2026-01-10 18:59:12] 2026-01-10 23:58:13,270 | INFO     | neventsw: 0
[2026-01-10 18:59:12] 2026-01-10 23:58:13,270 | INFO     | pid: 941256
[2026-01-10 18:59:12] 2026-01-10 23:58:13,270 | INFO     | pgrp: 941256
[2026-01-10 18:59:12] 2026-01-10 23:58:13,270 | INFO     | corecount: 11
[2026-01-10 18:59:12] 2026-01-10 23:58:13,270 | INFO     | event service: False
[2026-01-10 18:59:12] 2026-01-10 23:58:13,270 | INFO     | sizes: {0: 2284455, 1: 2284597, 5: 2284859, 11: 2284915, 2807: 2311143, 2809: 2320137, 2812: 2320321, 2816: 2320599}
[2026-01-10 18:59:12] 2026-01-10 23:58:13,270 | INFO     | --------------------------------------------------
[2026-01-10 18:59:12] 2026-01-10 23:58:13,270 | INFO     | 
[2026-01-10 18:59:12] 2026-01-10 23:58:13,271 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 18:59:12] 2026-01-10 23:58:13,289 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 18:59:12] 2026-01-10 23:58:13,289 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 18:59:12] 2026-01-10 23:58:13,289 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 18:59:12] 2026-01-10 23:58:13,289 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 18:59:12] 2026-01-10 23:58:13,289 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 18:59:12] 2026-01-10 23:58:13,289 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 18:59:12] 2026-01-10 23:58:13,289 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 18:59:12] 2026-01-10 23:58:13,290 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 18:59:12] 2026-01-10 23:58:13,290 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 18:59:12] 2026-01-10 23:58:13,290 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 18:59:12] 2026-01-10 23:58:13,290 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 18:59:12] 2026-01-10 23:58:13,290 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 18:59:12] 2026-01-10 23:58:13,290 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 18:59:12] 2026-01-10 23:58:13,290 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 18:59:12] 2026-01-10 23:58:13,290 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 18:59:12] 2026-01-10 23:58:13,290 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 18:59:12] 2026-01-10 23:58:13,290 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 18:59:12] 2026-01-10 23:58:13,290 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 18:59:12] 2026-01-10 23:58:13,290 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 18:59:12] 2026-01-10 23:58:13,290 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 18:59:12] 2026-01-10 23:58:13,290 | INFO     | job 6965803375 has completed (purged errors)
[2026-01-10 18:59:12] 2026-01-10 23:58:13,290 | INFO     | overall cleanup function is called
[2026-01-10 18:59:12] 2026-01-10 23:58:14,310 | INFO     | --- collectZombieJob: --- 10, [941256]
[2026-01-10 18:59:12] 2026-01-10 23:58:14,310 | INFO     | zombie collector waiting for pid 941256
[2026-01-10 18:59:12] 2026-01-10 23:58:14,310 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 18:59:12] 2026-01-10 23:58:14,310 | INFO     | collected zombie processes
[2026-01-10 18:59:12] 2026-01-10 23:58:14,310 | INFO     | will attempt to kill all subprocesses of pid=941256
[2026-01-10 18:59:12] 2026-01-10 23:58:14,655 | INFO     | process IDs to be killed: [941256] (in reverse order)
[2026-01-10 18:59:12] 2026-01-10 23:58:14,776 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 18:59:12] 2026-01-10 23:58:14,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 18:59:12] 2026-01-10 23:58:14,789 | INFO     | did not find any defunct processes belonging to 941256
[2026-01-10 18:59:12] 2026-01-10 23:58:14,801 | INFO     | did not find any defunct processes belonging to 941256
[2026-01-10 18:59:12] 2026-01-10 23:58:14,801 | INFO     | ready for new job
[2026-01-10 18:59:12] 2026-01-10 23:58:14,801 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 18:59:12] 2026-01-10 23:58:14,802 | INFO     | ***************************************
[2026-01-10 18:59:12] 2026-01-10 23:58:14,803 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 18:59:12] 2026-01-10 23:58:14,803 | INFO     | ***************************************
[2026-01-10 18:59:12] 2026-01-10 23:58:14,803 | INFO     | 
[2026-01-10 18:59:12] 2026-01-10 23:58:14,807 | INFO     | architecture information:
[2026-01-10 18:59:12] 2026-01-10 23:58:14,808 | INFO     | executing command: cat /etc/os-release
[2026-01-10 18:59:12] 2026-01-10 23:58:14,831 | INFO     | cat /etc/os-release:
[2026-01-10 18:59:12] NAME="CentOS Linux"
[2026-01-10 18:59:12] VERSION="7 (Core)"
[2026-01-10 18:59:12] ID="centos"
[2026-01-10 18:59:12] ID_LIKE="rhel fedora"
[2026-01-10 18:59:12] VERSION_ID="7"
[2026-01-10 18:59:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 18:59:12] ANSI_COLOR="0;31"
[2026-01-10 18:59:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 18:59:12] HOME_URL="https://www.centos.org/"
[2026-01-10 18:59:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 18:59:12] 
[2026-01-10 18:59:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 18:59:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 18:59:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 18:59:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 18:59:12] 
[2026-01-10 18:59:12] 2026-01-10 23:58:14,831 | INFO     | ***************************************
[2026-01-10 18:59:12] 2026-01-10 23:58:15,336 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 18:59:12] 2026-01-10 23:58:15,357 | INFO     | sufficient remaining disk space (128781910016 B)
[2026-01-10 18:59:12] 2026-01-10 23:58:15,358 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 18:59:12] 2026-01-10 23:58:15,358 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 18:59:12] 2026-01-10 23:58:15,358 | INFO     | update_server=False
[2026-01-10 18:59:12] 2026-01-10 23:58:15,358 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 18:59:12] 2026-01-10 23:58:15,358 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 18:59:12] 2026-01-10 23:58:15,601 | INFO     | all payload control threads have been joined
[2026-01-10 18:59:12] 2026-01-10 23:58:15,848 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 18:59:12] 2026-01-10 23:58:15,848 | INFO     | aborting loop
[2026-01-10 18:59:12] 2026-01-10 23:58:16,093 | INFO     | all data control threads have been joined
[2026-01-10 18:59:12] 2026-01-10 23:58:16,363 | INFO     | [job] retrieve thread has finished
[2026-01-10 18:59:12] 2026-01-10 23:58:16,369 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 18:59:12] 2026-01-10 23:58:16,606 | INFO     | [payload] control thread has finished
[2026-01-10 18:59:12] 2026-01-10 23:58:16,639 | INFO     | [payload] failed_post thread has finished
[2026-01-10 18:59:12] 2026-01-10 23:58:16,854 | INFO     | [job] job monitor thread has finished
[2026-01-10 18:59:12] 2026-01-10 23:58:17,014 | INFO     | all job control threads have been joined
[2026-01-10 18:59:12] 2026-01-10 23:58:17,034 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 18:59:12] 2026-01-10 23:58:17,098 | INFO     | [data] control thread has finished
[2026-01-10 18:59:12] 2026-01-10 23:58:17,519 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 18:59:12] 2026-01-10 23:58:17,699 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 18:59:12] 2026-01-10 23:58:17,708 | INFO     | [job] validate thread has finished
[2026-01-10 18:59:12] 2026-01-10 23:58:17,834 | INFO     | [data] copytool_in thread has finished
[2026-01-10 18:59:12] 2026-01-10 23:58:17,924 | INFO     | [payload] validate_post thread has finished
[2026-01-10 18:59:12] 2026-01-10 23:58:18,020 | INFO     | [job] control thread has finished
[2026-01-10 18:59:12] 2026-01-10 23:58:18,288 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 18:59:12] 2026-01-10 23:58:18,374 | INFO     | [data] copytool_out thread has finished
[2026-01-10 18:59:12] 2026-01-10 23:58:19,294 | INFO     | [job] queue monitor thread has finished
[2026-01-10 18:59:12] 2026-01-10 23:58:19,364 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 18:59:12] 2026-01-10 23:58:25,819 | INFO     | job.realtimelogging is not enabled
[2026-01-10 18:59:12] 2026-01-10 23:58:26,819 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 18:59:12] 2026-01-10 23:58:46,432 | INFO     | PID=919293 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 18:59:12] 2026-01-10 23:58:46,432 | INFO     | .. there are 14 such processes running
[2026-01-10 18:59:12] 2026-01-10 23:58:46,432 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 18:59:12] 2026-01-10 23:58:46,432 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 18:59:12] 2026-01-10 23:58:46,432 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 18:59:12] 2026-01-10 23:59:06,201 | INFO     | [monitor] cgroup control has ended
[2026-01-10 18:59:12] 2026-01-10 23:59:07,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139892427089728)>', '<ExcThread(monitor, started 139891975382784)>']
[2026-01-10 18:59:12] 2026-01-10 23:59:07,547 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 18:59:12] 2026-01-10 23:59:07,547 | INFO     | [monitor] control thread has ended
[2026-01-10 18:59:12] 2026-01-10 23:59:12,239 | INFO     | all workflow threads have been joined
[2026-01-10 18:59:12] 2026-01-10 23:59:12,240 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 18:59:12] 2026-01-10 23:59:12,240 | INFO     | traces error code: 0
[2026-01-10 18:59:12] 2026-01-10 23:59:12,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 18:59:12] 2026-01-10 23:59:12,350 [wrapper] ==== pilot stdout END ====
[2026-01-10 18:59:12] 2026-01-10 23:59:12,353 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 18:59:12] 2026-01-10 23:59:12,355 [wrapper] pilotpid: 919293
[2026-01-10 18:59:12] 2026-01-10 23:59:12,359 [wrapper] Pilot exit status: 0
[2026-01-10 18:59:12] 2026-01-10 23:59:12,389 [wrapper] pandaids: 6965803375
[2026-01-10 18:59:12] 2026-01-10 23:59:12,487 [wrapper] cleanup supervisor_pilot 1033243 919294
[2026-01-10 18:59:12] 2026-01-10 23:59:12,496 [wrapper] Test setup, not cleaning
[2026-01-10 18:59:12] 2026-01-10 23:59:12,509 [wrapper] apfmon messages muted
[2026-01-10 18:59:12] 2026-01-10 23:59:12,511 [wrapper] ==== wrapper stdout END ====
[2026-01-10 18:59:12] 2026-01-10 23:59:12,514 [wrapper] ==== wrapper stderr END ====
[2026-01-10 18:59:12]  *** Error codes and diagnostics ***
[2026-01-10 18:59:12]     "exeErrorCode": 0,
[2026-01-10 18:59:12]     "exeErrorDiag": "",
[2026-01-10 18:59:12]     "pilotErrorCode": 0,
[2026-01-10 18:59:12]     "pilotErrorDiag": "",
[2026-01-10 18:59:12]  *** Listing of results directory ***
[2026-01-10 18:59:12] total 439796
[2026-01-10 18:59:12] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 18:59:12] -rwx------. 1 boincer umatlas     36322 Jan 10 18:04 runpilot2-wrapper.sh
[2026-01-10 18:59:12] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 18:59:12] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 18:59:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:10 run_atlas
[2026-01-10 18:59:12] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:10 job.xml
[2026-01-10 18:59:12] -rw-r--r--. 2 boincer umatlas 396184497 Jan 10 18:10 EVNT.47962006._000013.pool.root.1
[2026-01-10 18:59:12] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 18:59:12] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:10 shared
[2026-01-10 18:59:12] -rw-r--r--. 2 boincer umatlas    592611 Jan 10 18:10 input.tar.gz
[2026-01-10 18:59:12] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:10 boinc_lockfile
[2026-01-10 18:59:12] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 18:10 pandaJob.out
[2026-01-10 18:59:12] -rw-------. 1 boincer umatlas        57 Jan 10 18:10 setup.sh.local
[2026-01-10 18:59:12] -rw-------. 1 boincer umatlas    989548 Jan 10 18:10 agis_schedconf.cvmfs.json
[2026-01-10 18:59:12] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:11 agis_ddmendpoints.agis.ALL.json
[2026-01-10 18:59:12] drwx------. 5 boincer umatlas      4096 Jan 10 18:11 pilot3
[2026-01-10 18:59:12] -rw-r--r--. 1 boincer umatlas       529 Jan 10 18:51 boinc_task_state.xml
[2026-01-10 18:59:12] -rw-------. 1 boincer umatlas        95 Jan 10 18:57 pilot_heartbeat.json
[2026-01-10 18:59:12] -rw-------. 1 boincer umatlas  46372811 Jan 10 18:57 HITS.47962010._002827.pool.root.1
[2026-01-10 18:59:12] -rw-r--r--. 1 boincer umatlas      6956 Jan 10 18:57 init_data.xml
[2026-01-10 18:59:12] -rw-------. 1 boincer umatlas      1027 Jan 10 18:58 memory_monitor_summary.json
[2026-01-10 18:59:12] -rw-------. 1 boincer umatlas   1497775 Jan 10 18:58 log.47962010._002827.job.log.tgz.1
[2026-01-10 18:59:12] -rw-------. 1 boincer umatlas      8541 Jan 10 18:58 heartbeat.json
[2026-01-10 18:59:12] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 18:58 boinc_mmap_file
[2026-01-10 18:59:12] -rw-r--r--. 1 boincer umatlas        27 Jan 10 18:58 wrapper_checkpoint.txt
[2026-01-10 18:59:12] -rw-------. 1 boincer umatlas      4896 Jan 10 18:59 pilotlog.txt
[2026-01-10 18:59:12] -rw-------. 1 boincer umatlas    439985 Jan 10 18:59 log.47962010._002827.job.log.1
[2026-01-10 18:59:12] -rw-------. 1 boincer umatlas       353 Jan 10 18:59 output.list
[2026-01-10 18:59:12] -rw-r--r--. 1 boincer umatlas       620 Jan 10 18:59 runtime_log
[2026-01-10 18:59:12] -rw-------. 1 boincer umatlas   1955840 Jan 10 18:59 result.tar.gz
[2026-01-10 18:59:12] -rw-r--r--. 1 boincer umatlas      9339 Jan 10 18:59 runtime_log.err
[2026-01-10 18:59:12] -rw-------. 1 boincer umatlas       651 Jan 10 18:59 NNsKDm2Bxy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZwmKDm55004m.diag
[2026-01-10 18:59:12] -rw-r--r--. 1 boincer umatlas     22418 Jan 10 18:59 stderr.txt
[2026-01-10 18:59:12] HITS file was successfully produced:
[2026-01-10 18:59:12] -rw-------. 1 boincer umatlas 46372811 Jan 10 18:57 shared/HITS.pool.root.1
[2026-01-10 18:59:12]  *** Contents of shared directory: ***
[2026-01-10 18:59:12] total 434700
[2026-01-10 18:59:12] -rw-r--r--. 2 boincer umatlas 396184497 Jan 10 18:10 ATLAS.root_0
[2026-01-10 18:59:12] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 18:59:12] -rw-r--r--. 2 boincer umatlas    592611 Jan 10 18:10 input.tar.gz
[2026-01-10 18:59:12] -rw-------. 1 boincer umatlas  46372811 Jan 10 18:57 HITS.pool.root.1
[2026-01-10 18:59:12] -rw-------. 1 boincer umatlas   1955840 Jan 10 18:59 result.tar.gz
18:59:14 (914640): run_atlas exited; CPU time 12048.389829
18:59:14 (914640): called boinc_finish(0)

</stderr_txt>
]]>

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