Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:11:03 (922380): wrapper (7.7.26015): starting
18:11:03 (922380): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 18:11:03] Arguments: --nthreads 11
[2026-01-10 18:11:03] Threads: 11
[2026-01-10 18:11:03] Checking for CVMFS
[2026-01-10 18:11:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:11:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:11:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:11:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:11:04] 2.13.3.0 7347 24958 154948 154996 3 70 27987068 40960000 18873 16776704 0 41209393 99.794 18803028 40347 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 18:11:04] CVMFS is ok
[2026-01-10 18:11:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:11:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:11:04] Further information can be found at the LHC@home message board.
[2026-01-10 18:11:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:11:04] Checking for apptainer binary...
[2026-01-10 18:11:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:11:04] Running /usr/bin/apptainer --version
[2026-01-10 18:11:04] apptainer version 1.4.5-2.el9
[2026-01-10 18:11:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:11:04] c-212-2.aglt2.org
[2026-01-10 18:11:04] apptainer works
[2026-01-10 18:11:04] Set ATHENA_PROC_NUMBER=11
[2026-01-10 18:11:04] Set ATHENA_CORE_NUMBER=11
[2026-01-10 18:11:04] Starting ATLAS job with PandaID=6965803379
[2026-01-10 18:11:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 18:49:43]  *** The last 200 lines of the pilot log: ***
[2026-01-10 18:49:43]  status_code=0
[2026-01-10 18:49:43]  storage_token=
[2026-01-10 18:49:43]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6965803379/log.47962010._002831.job.log.tgz.1
[2026-01-10 18:49:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/92/25/log.47962010._002831.job.log.tgz.1
[2026-01-10 18:49:43]  workdir=None
[2026-01-10 18:49:43] ]
[2026-01-10 18:49:43] 2026-01-10 23:48:59,202 | INFO     | transferring file log.47962010._002831.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6965803379/log.47962010._002831.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 18:49:43] 2026-01-10 23:48:59,202 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6965803379/log.47962010._002831.job.log.tgz.1 /tmp/boinchome/slots/2/log.47962010._002831.job
[2026-01-10 18:49:43] 2026-01-10 23:48:59,224 | INFO     | adding to output.list: log.47962010._002831.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/92/25/log.47962010._002831.job.log.tgz.
[2026-01-10 18:49:43] 2026-01-10 23:48:59,225 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 18:49:43] 2026-01-10 23:48:59,225 | INFO     | summary of transferred files:
[2026-01-10 18:49:43] 2026-01-10 23:48:59,225 | INFO     |  -- lfn=log.47962010._002831.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 18:49:43] 2026-01-10 23:48:59,225 | INFO     | stage-out finished correctly
[2026-01-10 18:49:43] 2026-01-10 23:49:00,017 | INFO     | monitor loop #167: job 0:6965803379 is in state 'finished'
[2026-01-10 18:49:43] 2026-01-10 23:49:00,017 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:49:43] 2026-01-10 23:49:00,860 | INFO     | time since job start (2265s) is within the limit (349056.0s)
[2026-01-10 18:49:43] 2026-01-10 23:49:02,491 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 18:49:43] 2026-01-10 23:49:02,601 | INFO     | monitor loop #168: job 0:6965803379 is in state 'finished'
[2026-01-10 18:49:43] 2026-01-10 23:49:02,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:49:43] 2026-01-10 23:49:02,866 | INFO     | time since job start (2267s) is within the limit (349056.0s)
[2026-01-10 18:49:43] 2026-01-10 23:49:04,748 | INFO     | job 6965803379 has state=finished
[2026-01-10 18:49:43] 2026-01-10 23:49:04,748 | INFO     | preparing for final server update for job 6965803379 in state='finished'
[2026-01-10 18:49:43] 2026-01-10 23:49:04,748 | INFO     | this job has now completed (state=finished)
[2026-01-10 18:49:43] 2026-01-10 23:49:04,748 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 18:49:43] 2026-01-10 23:49:04,748 | INFO     | log transfer has been attempted: DONE
[2026-01-10 18:49:43] 2026-01-10 23:49:04,749 | INFO     | job 6965803379 has finished - writing final server update
[2026-01-10 18:49:43] 2026-01-10 23:49:04,749 | INFO     | total number of processed events: 50 (read)
[2026-01-10 18:49:43] 2026-01-10 23:49:04,767 | INFO     | executing command: lscpu
[2026-01-10 18:49:43] 2026-01-10 23:49:04,832 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 18:49:43] 2026-01-10 23:49:04,873 | INFO     | time since job start (2269s) is within the limit (349056.0s)
[2026-01-10 18:49:43] 2026-01-10 23:49:05,106 | INFO     | monitor loop #169: job 0:6965803379 is in state 'finished'
[2026-01-10 18:49:43] 2026-01-10 23:49:05,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:49:43] 2026-01-10 23:49:06,882 | INFO     | time since job start (2271s) is within the limit (349056.0s)
[2026-01-10 18:49:43] 2026-01-10 23:49:07,609 | INFO     | monitor loop #170: job 0:6965803379 is in state 'finished'
[2026-01-10 18:49:43] 2026-01-10 23:49:07,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:49:43] 2026-01-10 23:49:08,322 | INFO     | PID=934876 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 18:49:43] 2026-01-10 23:49:08,322 | INFO     | .. there are 15 such processes running
[2026-01-10 18:49:43] 2026-01-10 23:49:09,322 | INFO     | time since job start (2274s) is within the limit (349056.0s)
[2026-01-10 18:49:43] 2026-01-10 23:49:10,116 | INFO     | monitor loop #171: job 0:6965803379 is in state 'finished'
[2026-01-10 18:49:43] 2026-01-10 23:49:10,116 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:49:43] 2026-01-10 23:49:10,921 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 18:49:43] 2026-01-10 23:49:10,926 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3072.773052083334
[2026-01-10 18:49:43] 2026-01-10 23:49:10,940 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965803379/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 18:49:43] 2026-01-10 23:49:10,941 | INFO     | extracted standard info from prmon json
[2026-01-10 18:49:43] 2026-01-10 23:49:10,941 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 18:49:43] 2026-01-10 23:49:10,941 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 18:49:43] 2026-01-10 23:49:10,943 | INFO     | fitting pss+swap vs Time
[2026-01-10 18:49:43] 2026-01-10 23:49:10,943 | INFO     | sum of square deviations: 8356606.966666663
[2026-01-10 18:49:43] 2026-01-10 23:49:10,943 | INFO     | sum of deviations: -367576405.0333332
[2026-01-10 18:49:43] 2026-01-10 23:49:10,943 | INFO     | mean x: 1768087890.3666666
[2026-01-10 18:49:43] 2026-01-10 23:49:10,943 | INFO     | mean y: 2815155.3666666667
[2026-01-10 18:49:43] 2026-01-10 23:49:10,943 | INFO     | intersect: 77774498461.32317
[2026-01-10 18:49:43] 2026-01-10 23:49:10,943 | INFO     | chi2: 0.23642545430955803
[2026-01-10 18:49:43] 2026-01-10 23:49:10,943 | INFO     | current memory leak: -43.99 B/s (using 30 data points, chi2=0.24)
[2026-01-10 18:49:43] 2026-01-10 23:49:10,944 | INFO     | could have reported an average CPU frequency of 3156 MHz (5 samples)
[2026-01-10 18:49:43] 2026-01-10 23:49:10,944 | INFO     | ..............................
[2026-01-10 18:49:43] 2026-01-10 23:49:10,944 | INFO     | . Timing measurements:
[2026-01-10 18:49:43] 2026-01-10 23:49:10,944 | INFO     | . get job = 0 s
[2026-01-10 18:49:43] 2026-01-10 23:49:10,944 | INFO     | . initial setup = 2 s
[2026-01-10 18:49:43] 2026-01-10 23:49:10,944 | INFO     | . payload setup = 5 s
[2026-01-10 18:49:43] 2026-01-10 23:49:10,944 | INFO     | . stage-in = 0 s
[2026-01-10 18:49:43] 2026-01-10 23:49:10,944 | INFO     | . payload execution = 2239 s
[2026-01-10 18:49:43] 2026-01-10 23:49:10,944 | INFO     | . stage-out = 0 s
[2026-01-10 18:49:43] 2026-01-10 23:49:10,944 | INFO     | . log creation = 0 s
[2026-01-10 18:49:43] 2026-01-10 23:49:10,944 | INFO     | ..............................
[2026-01-10 18:49:43] 2026-01-10 23:49:11,019 | INFO     | 
[2026-01-10 18:49:43] 2026-01-10 23:49:11,019 | INFO     | job summary report
[2026-01-10 18:49:43] 2026-01-10 23:49:11,019 | INFO     | --------------------------------------------------
[2026-01-10 18:49:43] 2026-01-10 23:49:11,019 | INFO     | PanDA job id: 6965803379
[2026-01-10 18:49:43] 2026-01-10 23:49:11,019 | INFO     | task id: 47962010
[2026-01-10 18:49:43] 2026-01-10 23:49:11,019 | INFO     | errors: (none)
[2026-01-10 18:49:43] 2026-01-10 23:49:11,019 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 18:49:43] 2026-01-10 23:49:11,019 | INFO     | pilot state: finished 
[2026-01-10 18:49:43] 2026-01-10 23:49:11,019 | INFO     | transexitcode: 0
[2026-01-10 18:49:43] 2026-01-10 23:49:11,019 | INFO     | exeerrorcode: 0
[2026-01-10 18:49:43] 2026-01-10 23:49:11,019 | INFO     | exeerrordiag: 
[2026-01-10 18:49:43] 2026-01-10 23:49:11,019 | INFO     | exitcode: 0
[2026-01-10 18:49:43] 2026-01-10 23:49:11,019 | INFO     | exitmsg: OK
[2026-01-10 18:49:43] 2026-01-10 23:49:11,020 | INFO     | cpuconsumptiontime: 12199 s
[2026-01-10 18:49:43] 2026-01-10 23:49:11,020 | INFO     | nevents: 50
[2026-01-10 18:49:43] 2026-01-10 23:49:11,020 | INFO     | neventsw: 0
[2026-01-10 18:49:43] 2026-01-10 23:49:11,020 | INFO     | pid: 951897
[2026-01-10 18:49:43] 2026-01-10 23:49:11,020 | INFO     | pgrp: 951897
[2026-01-10 18:49:43] 2026-01-10 23:49:11,020 | INFO     | corecount: 11
[2026-01-10 18:49:43] 2026-01-10 23:49:11,020 | INFO     | event service: False
[2026-01-10 18:49:43] 2026-01-10 23:49:11,020 | INFO     | sizes: {0: 2284342, 1: 2284597, 5: 2284859, 11: 2284915, 2248: 2310811, 2250: 2319805, 2253: 2319989, 2261: 2320267}
[2026-01-10 18:49:43] 2026-01-10 23:49:11,020 | INFO     | --------------------------------------------------
[2026-01-10 18:49:43] 2026-01-10 23:49:11,020 | INFO     | 
[2026-01-10 18:49:43] 2026-01-10 23:49:11,020 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 18:49:43] 2026-01-10 23:49:11,039 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 18:49:43] 2026-01-10 23:49:11,039 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 18:49:43] 2026-01-10 23:49:11,039 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 18:49:43] 2026-01-10 23:49:11,039 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 18:49:43] 2026-01-10 23:49:11,039 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 18:49:43] 2026-01-10 23:49:11,039 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 18:49:43] 2026-01-10 23:49:11,039 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 18:49:43] 2026-01-10 23:49:11,039 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 18:49:43] 2026-01-10 23:49:11,040 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 18:49:43] 2026-01-10 23:49:11,040 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 18:49:43] 2026-01-10 23:49:11,040 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 18:49:43] 2026-01-10 23:49:11,040 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 18:49:43] 2026-01-10 23:49:11,040 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 18:49:43] 2026-01-10 23:49:11,040 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 18:49:43] 2026-01-10 23:49:11,040 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 18:49:43] 2026-01-10 23:49:11,040 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 18:49:43] 2026-01-10 23:49:11,040 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 18:49:43] 2026-01-10 23:49:11,040 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 18:49:43] 2026-01-10 23:49:11,040 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 18:49:43] 2026-01-10 23:49:11,040 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 18:49:43] 2026-01-10 23:49:11,040 | INFO     | job 6965803379 has completed (purged errors)
[2026-01-10 18:49:43] 2026-01-10 23:49:11,040 | INFO     | overall cleanup function is called
[2026-01-10 18:49:43] 2026-01-10 23:49:12,057 | INFO     | --- collectZombieJob: --- 10, [951897]
[2026-01-10 18:49:43] 2026-01-10 23:49:12,057 | INFO     | zombie collector waiting for pid 951897
[2026-01-10 18:49:43] 2026-01-10 23:49:12,057 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 18:49:43] 2026-01-10 23:49:12,057 | INFO     | collected zombie processes
[2026-01-10 18:49:43] 2026-01-10 23:49:12,057 | INFO     | will attempt to kill all subprocesses of pid=951897
[2026-01-10 18:49:43] 2026-01-10 23:49:12,435 | INFO     | process IDs to be killed: [951897] (in reverse order)
[2026-01-10 18:49:43] 2026-01-10 23:49:12,553 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 18:49:43] 2026-01-10 23:49:12,553 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 18:49:43] 2026-01-10 23:49:12,567 | INFO     | did not find any defunct processes belonging to 951897
[2026-01-10 18:49:43] 2026-01-10 23:49:12,581 | INFO     | did not find any defunct processes belonging to 951897
[2026-01-10 18:49:43] 2026-01-10 23:49:12,581 | INFO     | ready for new job
[2026-01-10 18:49:43] 2026-01-10 23:49:12,581 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 18:49:43] 2026-01-10 23:49:12,584 | INFO     | ***************************************
[2026-01-10 18:49:43] 2026-01-10 23:49:12,584 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 18:49:43] 2026-01-10 23:49:12,584 | INFO     | ***************************************
[2026-01-10 18:49:43] 2026-01-10 23:49:12,584 | INFO     | 
[2026-01-10 18:49:43] 2026-01-10 23:49:12,597 | INFO     | architecture information:
[2026-01-10 18:49:43] 2026-01-10 23:49:12,598 | INFO     | executing command: cat /etc/os-release
[2026-01-10 18:49:43] 2026-01-10 23:49:12,618 | INFO     | cat /etc/os-release:
[2026-01-10 18:49:43] NAME="CentOS Linux"
[2026-01-10 18:49:43] VERSION="7 (Core)"
[2026-01-10 18:49:43] ID="centos"
[2026-01-10 18:49:43] ID_LIKE="rhel fedora"
[2026-01-10 18:49:43] VERSION_ID="7"
[2026-01-10 18:49:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 18:49:43] ANSI_COLOR="0;31"
[2026-01-10 18:49:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 18:49:43] HOME_URL="https://www.centos.org/"
[2026-01-10 18:49:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 18:49:43] 
[2026-01-10 18:49:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 18:49:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 18:49:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 18:49:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 18:49:43] 
[2026-01-10 18:49:43] 2026-01-10 23:49:12,618 | INFO     | ***************************************
[2026-01-10 18:49:43] 2026-01-10 23:49:13,120 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 18:49:43] 2026-01-10 23:49:13,139 | INFO     | sufficient remaining disk space (127953534976 B)
[2026-01-10 18:49:43] 2026-01-10 23:49:13,139 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 18:49:43] 2026-01-10 23:49:13,139 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 18:49:43] 2026-01-10 23:49:13,139 | INFO     | update_server=False
[2026-01-10 18:49:43] 2026-01-10 23:49:13,139 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 18:49:43] 2026-01-10 23:49:13,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 18:49:43] 2026-01-10 23:49:13,318 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 18:49:43] 2026-01-10 23:49:13,475 | INFO     | all data control threads have been joined
[2026-01-10 18:49:43] 2026-01-10 23:49:13,630 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 18:49:43] 2026-01-10 23:49:13,630 | INFO     | aborting loop
[2026-01-10 18:49:43] 2026-01-10 23:49:13,935 | INFO     | all job control threads have been joined
[2026-01-10 18:49:43] 2026-01-10 23:49:14,145 | INFO     | [job] retrieve thread has finished
[2026-01-10 18:49:43] 2026-01-10 23:49:14,451 | INFO     | [data] copytool_in thread has finished
[2026-01-10 18:49:43] 2026-01-10 23:49:14,478 | INFO     | [data] control thread has finished
[2026-01-10 18:49:43] 2026-01-10 23:49:14,573 | INFO     | all payload control threads have been joined
[2026-01-10 18:49:43] 2026-01-10 23:49:14,639 | INFO     | [job] job monitor thread has finished
[2026-01-10 18:49:43] 2026-01-10 23:49:14,653 | INFO     | [payload] failed_post thread has finished
[2026-01-10 18:49:43] 2026-01-10 23:49:14,943 | INFO     | [job] control thread has finished
[2026-01-10 18:49:43] 2026-01-10 23:49:14,973 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 18:49:43] 2026-01-10 23:49:15,072 | INFO     | [payload] validate_post thread has finished
[2026-01-10 18:49:43] 2026-01-10 23:49:15,146 | INFO     | [data] copytool_out thread has finished
[2026-01-10 18:49:43] 2026-01-10 23:49:15,152 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 18:49:43] 2026-01-10 23:49:15,280 | INFO     | [job] validate thread has finished
[2026-01-10 18:49:43] 2026-01-10 23:49:15,313 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 18:49:43] 2026-01-10 23:49:15,436 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 18:49:43] 2026-01-10 23:49:15,578 | INFO     | [payload] control thread has finished
[2026-01-10 18:49:43] 2026-01-10 23:49:16,031 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 18:49:43] 2026-01-10 23:49:17,037 | INFO     | [job] queue monitor thread has finished
[2026-01-10 18:49:43] 2026-01-10 23:49:17,328 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 18:49:43] 2026-01-10 23:49:18,420 | INFO     | [monitor] cgroup control has ended
[2026-01-10 18:49:43] 2026-01-10 23:49:18,869 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140125335942976)>', '<ExcThread(monitor, started 140124960573184)>']
[2026-01-10 18:49:43] 2026-01-10 23:49:23,895 | INFO     | all workflow threads have been joined
[2026-01-10 18:49:43] 2026-01-10 23:49:23,895 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 18:49:43] 2026-01-10 23:49:23,895 | INFO     | traces error code: 0
[2026-01-10 18:49:43] 2026-01-10 23:49:23,895 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 18:49:43] 2026-01-10 23:49:42,920 | INFO     | PID=934876 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 18:49:43] 2026-01-10 23:49:42,921 | INFO     | .. there are 15 such processes running
[2026-01-10 18:49:43] 2026-01-10 23:49:42,921 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 18:49:43] 2026-01-10 23:49:42,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 18:49:43] 2026-01-10 23:49:42,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 18:49:43] 2026-01-10 23:49:42,922 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 18:49:43] 2026-01-10 23:49:42,922 | INFO     | [monitor] control thread has ended
[2026-01-10 18:49:43] 2026-01-10 23:49:43,154 [wrapper] ==== pilot stdout END ====
[2026-01-10 18:49:43] 2026-01-10 23:49:43,180 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 18:49:43] 2026-01-10 23:49:43,186 [wrapper] pilotpid: 934876
[2026-01-10 18:49:43] 2026-01-10 23:49:43,189 [wrapper] Pilot exit status: 0
[2026-01-10 18:49:43] 2026-01-10 23:49:43,200 [wrapper] pandaids: 6965803379
[2026-01-10 18:49:43] 2026-01-10 23:49:43,292 [wrapper] cleanup supervisor_pilot 1012576 934877
[2026-01-10 18:49:43] 2026-01-10 23:49:43,296 [wrapper] Test setup, not cleaning
[2026-01-10 18:49:43] 2026-01-10 23:49:43,298 [wrapper] apfmon messages muted
[2026-01-10 18:49:43] 2026-01-10 23:49:43,301 [wrapper] ==== wrapper stdout END ====
[2026-01-10 18:49:43] 2026-01-10 23:49:43,303 [wrapper] ==== wrapper stderr END ====
[2026-01-10 18:49:43]  *** Error codes and diagnostics ***
[2026-01-10 18:49:43]     "exeErrorCode": 0,
[2026-01-10 18:49:43]     "exeErrorDiag": "",
[2026-01-10 18:49:43]     "pilotErrorCode": 0,
[2026-01-10 18:49:43]     "pilotErrorDiag": "",
[2026-01-10 18:49:43]  *** Listing of results directory ***
[2026-01-10 18:49:43] total 440892
[2026-01-10 18:49:43] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 18:49:43] -rwx------. 1 boincer umatlas     36322 Jan 10 18:04 runpilot2-wrapper.sh
[2026-01-10 18:49:43] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 18:49:43] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 18:49:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:11 run_atlas
[2026-01-10 18:49:43] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:11 job.xml
[2026-01-10 18:49:43] -rw-r--r--. 2 boincer umatlas 396184497 Jan 10 18:11 EVNT.47962006._000013.pool.root.1
[2026-01-10 18:49:43] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:11 start_atlas.sh
[2026-01-10 18:49:43] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:11 shared
[2026-01-10 18:49:43] -rw-r--r--. 2 boincer umatlas    592611 Jan 10 18:11 input.tar.gz
[2026-01-10 18:49:43] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:11 boinc_lockfile
[2026-01-10 18:49:43] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 18:11 pandaJob.out
[2026-01-10 18:49:43] -rw-------. 1 boincer umatlas        57 Jan 10 18:11 setup.sh.local
[2026-01-10 18:49:43] -rw-------. 1 boincer umatlas    989548 Jan 10 18:11 agis_schedconf.cvmfs.json
[2026-01-10 18:49:43] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:11 agis_ddmendpoints.agis.ALL.json
[2026-01-10 18:49:43] drwx------. 5 boincer umatlas      4096 Jan 10 18:11 pilot3
[2026-01-10 18:49:43] -rw-r--r--. 1 boincer umatlas       529 Jan 10 18:42 boinc_task_state.xml
[2026-01-10 18:49:43] -rw-------. 1 boincer umatlas  47656221 Jan 10 18:48 HITS.47962010._002831.pool.root.1
[2026-01-10 18:49:43] -rw-------. 1 boincer umatlas        95 Jan 10 18:48 pilot_heartbeat.json
[2026-01-10 18:49:43] -rw-------. 1 boincer umatlas      1025 Jan 10 18:48 memory_monitor_summary.json
[2026-01-10 18:49:43] -rw-------. 1 boincer umatlas   1494696 Jan 10 18:48 log.47962010._002831.job.log.tgz.1
[2026-01-10 18:49:43] -rw-------. 1 boincer umatlas      8522 Jan 10 18:49 heartbeat.json
[2026-01-10 18:49:43] -rw-r--r--. 1 boincer umatlas        27 Jan 10 18:49 wrapper_checkpoint.txt
[2026-01-10 18:49:43] -rw-------. 1 boincer umatlas       822 Jan 10 18:49 pilotlog.txt
[2026-01-10 18:49:43] -rw-------. 1 boincer umatlas    366175 Jan 10 18:49 log.47962010._002831.job.log.1
[2026-01-10 18:49:43] -rw-r--r--. 1 boincer umatlas      6956 Jan 10 18:49 init_data.xml
[2026-01-10 18:49:43] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 18:49 boinc_mmap_file
[2026-01-10 18:49:43] -rw-------. 1 boincer umatlas       353 Jan 10 18:49 output.list
[2026-01-10 18:49:43] -rw-r--r--. 1 boincer umatlas       620 Jan 10 18:49 runtime_log
[2026-01-10 18:49:43] -rw-------. 1 boincer umatlas   1884160 Jan 10 18:49 result.tar.gz
[2026-01-10 18:49:43] -rw-r--r--. 1 boincer umatlas      9339 Jan 10 18:49 runtime_log.err
[2026-01-10 18:49:43] -rw-------. 1 boincer umatlas       652 Jan 10 18:49 RoxKDm2Bxy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbwmKDm5wdybn.diag
[2026-01-10 18:49:43] -rw-r--r--. 1 boincer umatlas     22322 Jan 10 18:49 stderr.txt
[2026-01-10 18:49:43] HITS file was successfully produced:
[2026-01-10 18:49:43] -rw-------. 1 boincer umatlas 47656221 Jan 10 18:48 shared/HITS.pool.root.1
[2026-01-10 18:49:43]  *** Contents of shared directory: ***
[2026-01-10 18:49:43] total 435876
[2026-01-10 18:49:43] -rw-r--r--. 2 boincer umatlas 396184497 Jan 10 18:11 ATLAS.root_0
[2026-01-10 18:49:43] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:11 start_atlas.sh
[2026-01-10 18:49:43] -rw-r--r--. 2 boincer umatlas    592611 Jan 10 18:11 input.tar.gz
[2026-01-10 18:49:43] -rw-------. 1 boincer umatlas  47656221 Jan 10 18:48 HITS.pool.root.1
[2026-01-10 18:49:43] -rw-------. 1 boincer umatlas   1884160 Jan 10 18:49 result.tar.gz
18:49:45 (922380): run_atlas exited; CPU time 12127.684553
18:49:45 (922380): called boinc_finish(0)

</stderr_txt>
]]>

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