Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:10:17 (3128504): wrapper (7.7.26015): starting
18:10:17 (3128504): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 18:10:17] Arguments: --nthreads 12
[2026-01-10 18:10:17] Threads: 12
[2026-01-10 18:10:17] Checking for CVMFS
[2026-01-10 18:10:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:10:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:10:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:10:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:10:19] 2.13.3.0 10164 24180 150164 154996 2 13 24454108 39288833 5007 16776704 0 10744211 99.683 8285007 37296 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 18:10:19] CVMFS is ok
[2026-01-10 18:10:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:10:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:10:19] Further information can be found at the LHC@home message board.
[2026-01-10 18:10:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:10:19] Checking for apptainer binary...
[2026-01-10 18:10:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:10:19] Running /usr/bin/apptainer --version
[2026-01-10 18:10:19] apptainer version 1.4.5-2.el9
[2026-01-10 18:10:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:10:21] c-210-14.aglt2.org
[2026-01-10 18:10:21] apptainer works
[2026-01-10 18:10:21] Set ATHENA_PROC_NUMBER=12
[2026-01-10 18:10:21] Set ATHENA_CORE_NUMBER=12
[2026-01-10 18:10:21] Starting ATLAS job with PandaID=6965803323
[2026-01-10 18:10:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 20:41:54]  *** The last 200 lines of the pilot log: ***
[2026-01-10 20:41:54] 2026-01-11 01:41:21,260 | INFO     | extracted standard info from prmon json
[2026-01-10 20:41:54] 2026-01-11 01:41:21,260 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 20:41:54] 2026-01-11 01:41:21,261 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 20:41:54] 2026-01-11 01:41:21,264 | INFO     | fitting pss+swap vs Time
[2026-01-10 20:41:54] 2026-01-11 01:41:21,265 | INFO     | sum of square deviations: 964329406.2534248
[2026-01-10 20:41:54] 2026-01-11 01:41:21,266 | INFO     | sum of deviations: 38504006097.32189
[2026-01-10 20:41:54] 2026-01-11 01:41:21,266 | INFO     | mean x: 1768091214.458904
[2026-01-10 20:41:54] 2026-01-11 01:41:21,266 | INFO     | mean y: 2881559.6369863013
[2026-01-10 20:41:54] 2026-01-11 01:41:21,266 | INFO     | intersect: -70593944027.8386
[2026-01-10 20:41:54] 2026-01-11 01:41:21,266 | INFO     | chi2: 5.1398820895182515
[2026-01-10 20:41:54] 2026-01-11 01:41:21,267 | INFO     | sum of square deviations: 868806729.9148947
[2026-01-10 20:41:54] 2026-01-11 01:41:21,267 | INFO     | sum of deviations: 73643843262.61699
[2026-01-10 20:41:54] 2026-01-11 01:41:21,268 | INFO     | mean x: 1768091062.1702127
[2026-01-10 20:41:54] 2026-01-11 01:41:21,268 | INFO     | mean y: 2937278.0992907803
[2026-01-10 20:41:54] 2026-01-11 01:41:21,268 | INFO     | intersect: -149868163592.92175
[2026-01-10 20:41:54] 2026-01-11 01:41:21,268 | INFO     | chi2: 3.16405671426016
[2026-01-10 20:41:54] 2026-01-11 01:41:21,268 | INFO     | current chi2=3.16405671426016 (change=38.441064227667546 %)
[2026-01-10 20:41:54] 2026-01-11 01:41:21,269 | INFO     | sum of square deviations: 779808421.6176479
[2026-01-10 20:41:54] 2026-01-11 01:41:21,269 | INFO     | sum of deviations: 85140825825.01465
[2026-01-10 20:41:54] 2026-01-11 01:41:21,269 | INFO     | mean x: 1768090909.8676472
[2026-01-10 20:41:54] 2026-01-11 01:41:21,270 | INFO     | mean y: 2956684.8897058824
[2026-01-10 20:41:54] 2026-01-11 01:41:21,270 | INFO     | intersect: -193040252424.80045
[2026-01-10 20:41:54] 2026-01-11 01:41:21,270 | INFO     | chi2: 2.741343937168298
[2026-01-10 20:41:54] 2026-01-11 01:41:21,270 | INFO     | current chi2=2.741343937168298 (change=13.35983565612866 %)
[2026-01-10 20:41:54] 2026-01-11 01:41:21,270 | INFO     | right removable region: 135
[2026-01-10 20:41:54] 2026-01-11 01:41:21,270 | INFO     | sum of square deviations: 868276029.9148947
[2026-01-10 20:41:54] 2026-01-11 01:41:21,271 | INFO     | sum of deviations: -7019870020.042543
[2026-01-10 20:41:54] 2026-01-11 01:41:21,271 | INFO     | mean x: 1768091367.1702127
[2026-01-10 20:41:54] 2026-01-11 01:41:21,271 | INFO     | mean y: 2953659.085106383
[2026-01-10 20:41:54] 2026-01-11 01:41:21,272 | INFO     | intersect: 14297683852.559141
[2026-01-10 20:41:54] 2026-01-11 01:41:21,272 | INFO     | chi2: 2.4863407840041596
[2026-01-10 20:41:54] 2026-01-11 01:41:21,272 | INFO     | current chi2=2.4863407840041596 (change=51.6265015286139 %)
[2026-01-10 20:41:54] 2026-01-11 01:41:21,272 | INFO     | sum of square deviations: 778978150.9338263
[2026-01-10 20:41:54] 2026-01-11 01:41:21,273 | INFO     | sum of deviations: -13288707010.404423
[2026-01-10 20:41:54] 2026-01-11 01:41:21,273 | INFO     | mean x: 1768091519.7279413
[2026-01-10 20:41:54] 2026-01-11 01:41:21,273 | INFO     | mean y: 2964356.4485294116
[2026-01-10 20:41:54] 2026-01-11 01:41:21,273 | INFO     | intersect: 30165107088.024635
[2026-01-10 20:41:54] 2026-01-11 01:41:21,274 | INFO     | chi2: 2.4448600851513578
[2026-01-10 20:41:54] 2026-01-11 01:41:21,274 | INFO     | current chi2=2.4448600851513578 (change=1.668343258481192 %)
[2026-01-10 20:41:54] 2026-01-11 01:41:21,274 | INFO     | left removable region: 20
[2026-01-10 20:41:54] 2026-01-11 01:41:21,274 | INFO     | sum of square deviations: 471202836.3826079
[2026-01-10 20:41:54] 2026-01-11 01:41:21,275 | INFO     | sum of deviations: 22628659266.834797
[2026-01-10 20:41:54] 2026-01-11 01:41:21,275 | INFO     | mean x: 1768091489.5565217
[2026-01-10 20:41:54] 2026-01-11 01:41:21,275 | INFO     | mean y: 3078786.486956522
[2026-01-10 20:41:54] 2026-01-11 01:41:21,275 | INFO     | intersect: -84906299469.62764
[2026-01-10 20:41:54] 2026-01-11 01:41:21,275 | INFO     | chi2: 0.03076482640164096
[2026-01-10 20:41:54] 2026-01-11 01:41:21,275 | INFO     | current memory leak: 48.02 B/s (using 115 data points, chi2=0.03)
[2026-01-10 20:41:54] 2026-01-11 01:41:21,276 | INFO     | could have reported an average CPU frequency of 2602 MHz (8 samples)
[2026-01-10 20:41:54] 2026-01-11 01:41:21,276 | INFO     | ..............................
[2026-01-10 20:41:54] 2026-01-11 01:41:21,276 | INFO     | . Timing measurements:
[2026-01-10 20:41:54] 2026-01-11 01:41:21,276 | INFO     | . get job = 0 s
[2026-01-10 20:41:54] 2026-01-11 01:41:21,277 | INFO     | . initial setup = 5 s
[2026-01-10 20:41:54] 2026-01-11 01:41:21,277 | INFO     | . payload setup = 25 s
[2026-01-10 20:41:54] 2026-01-11 01:41:21,277 | INFO     | . stage-in = 0 s
[2026-01-10 20:41:54] 2026-01-11 01:41:21,277 | INFO     | . payload execution = 8898 s
[2026-01-10 20:41:54] 2026-01-11 01:41:21,277 | INFO     | . stage-out = 0 s
[2026-01-10 20:41:54] 2026-01-11 01:41:21,277 | INFO     | . log creation = 0 s
[2026-01-10 20:41:54] 2026-01-11 01:41:21,277 | INFO     | ..............................
[2026-01-10 20:41:54] 2026-01-11 01:41:21,867 | INFO     | 
[2026-01-10 20:41:54] 2026-01-11 01:41:21,867 | INFO     | job summary report
[2026-01-10 20:41:54] 2026-01-11 01:41:21,867 | INFO     | --------------------------------------------------
[2026-01-10 20:41:54] 2026-01-11 01:41:21,867 | INFO     | PanDA job id: 6965803323
[2026-01-10 20:41:54] 2026-01-11 01:41:21,868 | INFO     | task id: 47962010
[2026-01-10 20:41:54] 2026-01-11 01:41:21,868 | INFO     | errors: (none)
[2026-01-10 20:41:54] 2026-01-11 01:41:21,868 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 20:41:54] 2026-01-11 01:41:21,868 | INFO     | pilot state: finished 
[2026-01-10 20:41:54] 2026-01-11 01:41:21,868 | INFO     | transexitcode: 0
[2026-01-10 20:41:54] 2026-01-11 01:41:21,868 | INFO     | exeerrorcode: 0
[2026-01-10 20:41:54] 2026-01-11 01:41:21,868 | INFO     | exeerrordiag: 
[2026-01-10 20:41:54] 2026-01-11 01:41:21,868 | INFO     | exitcode: 0
[2026-01-10 20:41:54] 2026-01-11 01:41:21,868 | INFO     | exitmsg: OK
[2026-01-10 20:41:54] 2026-01-11 01:41:21,868 | INFO     | cpuconsumptiontime: 19115 s
[2026-01-10 20:41:54] 2026-01-11 01:41:21,868 | INFO     | nevents: 50
[2026-01-10 20:41:54] 2026-01-11 01:41:21,869 | INFO     | neventsw: 0
[2026-01-10 20:41:54] 2026-01-11 01:41:21,869 | INFO     | pid: 3140139
[2026-01-10 20:41:54] 2026-01-11 01:41:21,869 | INFO     | pgrp: 3140139
[2026-01-10 20:41:54] 2026-01-11 01:41:21,869 | INFO     | corecount: 12
[2026-01-10 20:41:54] 2026-01-11 01:41:21,869 | INFO     | event service: False
[2026-01-10 20:41:54] 2026-01-11 01:41:21,869 | INFO     | sizes: {0: 2283741, 1: 2284426, 2: 2284454, 3: 2284653, 14: 2284653, 22: 2284943, 25: 2285099, 8926: 2313830, 8927: 2313829, 8928: 2322935, 8932: 2323125}
[2026-01-10 20:41:54] 2026-01-11 01:41:21,869 | INFO     | --------------------------------------------------
[2026-01-10 20:41:54] 2026-01-11 01:41:21,869 | INFO     | 
[2026-01-10 20:41:54] 2026-01-11 01:41:21,869 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 20:41:54] 2026-01-11 01:41:21,886 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 20:41:54] 2026-01-11 01:41:21,887 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 20:41:54] 2026-01-11 01:41:21,887 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 20:41:54] 2026-01-11 01:41:21,887 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 20:41:54] 2026-01-11 01:41:21,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 20:41:54] 2026-01-11 01:41:21,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 20:41:54] 2026-01-11 01:41:21,887 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 20:41:54] 2026-01-11 01:41:21,887 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 20:41:54] 2026-01-11 01:41:21,888 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 20:41:54] 2026-01-11 01:41:21,888 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 20:41:54] 2026-01-11 01:41:21,888 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 20:41:54] 2026-01-11 01:41:21,888 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 20:41:54] 2026-01-11 01:41:21,888 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 20:41:54] 2026-01-11 01:41:21,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 20:41:54] 2026-01-11 01:41:21,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 20:41:54] 2026-01-11 01:41:21,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 20:41:54] 2026-01-11 01:41:21,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 20:41:54] 2026-01-11 01:41:21,888 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 20:41:54] 2026-01-11 01:41:21,889 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 20:41:54] 2026-01-11 01:41:21,889 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 20:41:54] 2026-01-11 01:41:21,889 | INFO     | job 6965803323 has completed (purged errors)
[2026-01-10 20:41:54] 2026-01-11 01:41:21,889 | INFO     | overall cleanup function is called
[2026-01-10 20:41:54] 2026-01-11 01:41:22,807 | WARNING  | process 3140139 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 20:41:54] 2026-01-11 01:41:22,906 | INFO     | --- collectZombieJob: --- 10, [3140139]
[2026-01-10 20:41:54] 2026-01-11 01:41:22,906 | INFO     | zombie collector waiting for pid 3140139
[2026-01-10 20:41:54] 2026-01-11 01:41:22,907 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 20:41:54] 2026-01-11 01:41:22,907 | INFO     | collected zombie processes
[2026-01-10 20:41:54] 2026-01-11 01:41:22,907 | INFO     | will attempt to kill all subprocesses of pid=3140139
[2026-01-10 20:41:54] 2026-01-11 01:41:23,069 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 20:41:54] 2026-01-11 01:41:23,142 [wrapper] supervise_pilot (15 min periods counter: 11)
[2026-01-10 20:41:54] 2026-01-11 01:41:23,388 | INFO     | process IDs to be killed: [3140139] (in reverse order)
[2026-01-10 20:41:54] 2026-01-11 01:41:23,447 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 20:41:54] 2026-01-11 01:41:23,448 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 20:41:54] 2026-01-11 01:41:23,467 | INFO     | did not find any defunct processes belonging to 3140139
[2026-01-10 20:41:54] 2026-01-11 01:41:23,478 | INFO     | number of running child processes to parent process 3140139: 1
[2026-01-10 20:41:54] 2026-01-11 01:41:23,478 | INFO     | maximum number of monitored processes: 20
[2026-01-10 20:41:54] 2026-01-11 01:41:23,478 | INFO     | aborting job monitoring since job object (job id=6965803323) has expired
[2026-01-10 20:41:54] 2026-01-11 01:41:23,480 | INFO     | did not find any defunct processes belonging to 3140139
[2026-01-10 20:41:54] 2026-01-11 01:41:23,480 | INFO     | ready for new job
[2026-01-10 20:41:54] 2026-01-11 01:41:23,480 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 20:41:54] 2026-01-11 01:41:23,482 | INFO     | ***************************************
[2026-01-10 20:41:54] 2026-01-11 01:41:23,482 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 20:41:54] 2026-01-11 01:41:23,482 | INFO     | ***************************************
[2026-01-10 20:41:54] 2026-01-11 01:41:23,482 | INFO     | 
[2026-01-10 20:41:54] 2026-01-11 01:41:23,484 | INFO     | architecture information:
[2026-01-10 20:41:54] 2026-01-11 01:41:23,484 | INFO     | executing command: cat /etc/os-release
[2026-01-10 20:41:54] 2026-01-11 01:41:23,497 | INFO     | cat /etc/os-release:
[2026-01-10 20:41:54] NAME="CentOS Linux"
[2026-01-10 20:41:54] VERSION="7 (Core)"
[2026-01-10 20:41:54] ID="centos"
[2026-01-10 20:41:54] ID_LIKE="rhel fedora"
[2026-01-10 20:41:54] VERSION_ID="7"
[2026-01-10 20:41:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 20:41:54] ANSI_COLOR="0;31"
[2026-01-10 20:41:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 20:41:54] HOME_URL="https://www.centos.org/"
[2026-01-10 20:41:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 20:41:54] 
[2026-01-10 20:41:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 20:41:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 20:41:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 20:41:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 20:41:54] 
[2026-01-10 20:41:54] 2026-01-11 01:41:23,497 | INFO     | ***************************************
[2026-01-10 20:41:54] 2026-01-11 01:41:23,999 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 20:41:54] 2026-01-11 01:41:24,015 | INFO     | sufficient remaining disk space (53228863488 B)
[2026-01-10 20:41:54] 2026-01-11 01:41:24,015 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 20:41:54] 2026-01-11 01:41:24,015 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 20:41:54] 2026-01-11 01:41:24,016 | INFO     | update_server=False
[2026-01-10 20:41:54] 2026-01-11 01:41:24,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 20:41:54] 2026-01-11 01:41:24,016 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 20:41:54] 2026-01-11 01:41:24,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:41:54] 2026-01-11 01:41:24,017 | INFO     | will abort loop
[2026-01-10 20:41:54] 2026-01-11 01:41:24,335 | INFO     | all data control threads have been joined
[2026-01-10 20:41:54] 2026-01-11 01:41:24,836 | INFO     | all payload control threads have been joined
[2026-01-10 20:41:54] 2026-01-11 01:41:24,877 | INFO     | all job control threads have been joined
[2026-01-10 20:41:54] 2026-01-11 01:41:25,021 | INFO     | [job] retrieve thread has finished
[2026-01-10 20:41:54] 2026-01-11 01:41:25,022 | INFO     | [job] job monitor thread has finished
[2026-01-10 20:41:54] 2026-01-11 01:41:25,298 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 20:41:54] 2026-01-11 01:41:25,341 | INFO     | [data] control thread has finished
[2026-01-10 20:41:54] 2026-01-11 01:41:25,423 | INFO     | [payload] validate_post thread has finished
[2026-01-10 20:41:54] 2026-01-11 01:41:25,489 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 20:41:54] 2026-01-11 01:41:25,540 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 20:41:54] 2026-01-11 01:41:25,711 | INFO     | [payload] failed_post thread has finished
[2026-01-10 20:41:54] 2026-01-11 01:41:25,841 | INFO     | [payload] control thread has finished
[2026-01-10 20:41:54] 2026-01-11 01:41:25,883 | INFO     | [job] control thread has finished
[2026-01-10 20:41:54] 2026-01-11 01:41:25,971 | INFO     | [data] copytool_in thread has finished
[2026-01-10 20:41:54] 2026-01-11 01:41:26,027 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 20:41:54] 2026-01-11 01:41:26,036 | INFO     | [job] validate thread has finished
[2026-01-10 20:41:54] 2026-01-11 01:41:26,389 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:41:54] 2026-01-11 01:41:27,394 | INFO     | [job] queue monitor thread has finished
[2026-01-10 20:41:54] 2026-01-11 01:41:27,494 | INFO     | [data] copytool_out thread has finished
[2026-01-10 20:41:54] 2026-01-11 01:41:28,022 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 20:41:54] 2026-01-11 01:41:34,168 | INFO     | job.realtimelogging is not enabled
[2026-01-10 20:41:54] 2026-01-11 01:41:35,173 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 20:41:54] 2026-01-11 01:41:43,489 | INFO     | [monitor] cgroup control has ended
[2026-01-10 20:41:54] 2026-01-11 01:41:45,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140111773493056)>', '<ExcThread(monitor, started 140111387797248)>']
[2026-01-10 20:41:54] 2026-01-11 01:41:50,538 | INFO     | all workflow threads have been joined
[2026-01-10 20:41:54] 2026-01-11 01:41:50,539 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 20:41:54] 2026-01-11 01:41:50,539 | INFO     | traces error code: 0
[2026-01-10 20:41:54] 2026-01-11 01:41:50,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 20:41:54] 2026-01-11 01:41:54,269 | INFO     | PID=3132734 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 20:41:54] 2026-01-11 01:41:54,270 | INFO     | .. there are 6 such processes running
[2026-01-10 20:41:54] 2026-01-11 01:41:54,270 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 20:41:54] 2026-01-11 01:41:54,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 20:41:54] 2026-01-11 01:41:54,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 20:41:54] 2026-01-11 01:41:54,270 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 20:41:54] 2026-01-11 01:41:54,271 | INFO     | [monitor] control thread has ended
[2026-01-10 20:41:54] 2026-01-11 01:41:54,392 [wrapper] ==== pilot stdout END ====
[2026-01-10 20:41:54] 2026-01-11 01:41:54,395 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 20:41:54] 2026-01-11 01:41:54,398 [wrapper] pilotpid: 3132734
[2026-01-10 20:41:54] 2026-01-11 01:41:54,400 [wrapper] Pilot exit status: 0
[2026-01-10 20:41:54] 2026-01-11 01:41:54,409 [wrapper] pandaids: 6965803323
[2026-01-10 20:41:54] 2026-01-11 01:41:54,454 [wrapper] cleanup supervisor_pilot 3335703 3132735
[2026-01-10 20:41:54] 2026-01-11 01:41:54,457 [wrapper] Test setup, not cleaning
[2026-01-10 20:41:54] 2026-01-11 01:41:54,459 [wrapper] apfmon messages muted
[2026-01-10 20:41:54] 2026-01-11 01:41:54,462 [wrapper] ==== wrapper stdout END ====
[2026-01-10 20:41:54] 2026-01-11 01:41:54,465 [wrapper] ==== wrapper stderr END ====
[2026-01-10 20:41:54]  *** Error codes and diagnostics ***
[2026-01-10 20:41:54]     "exeErrorCode": 0,
[2026-01-10 20:41:54]     "exeErrorDiag": "",
[2026-01-10 20:41:54]     "pilotErrorCode": 0,
[2026-01-10 20:41:54]     "pilotErrorDiag": "",
[2026-01-10 20:41:54]  *** Listing of results directory ***
[2026-01-10 20:41:54] total 438732
[2026-01-10 20:41:54] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 20:41:54] -rwx------. 1 boincer umatlas     36322 Jan 10 18:05 runpilot2-wrapper.sh
[2026-01-10 20:41:54] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 20:41:54] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 20:41:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:10 run_atlas
[2026-01-10 20:41:54] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:10 job.xml
[2026-01-10 20:41:54] -rw-r--r--. 2 boincer umatlas 392691344 Jan 10 18:10 EVNT.47962006._000075.pool.root.1
[2026-01-10 20:41:54] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 20:41:54] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:10 shared
[2026-01-10 20:41:54] -rw-r--r--. 2 boincer umatlas    592612 Jan 10 18:10 input.tar.gz
[2026-01-10 20:41:54] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:10 boinc_lockfile
[2026-01-10 20:41:54] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 18:10 pandaJob.out
[2026-01-10 20:41:54] -rw-------. 1 boincer umatlas        57 Jan 10 18:10 setup.sh.local
[2026-01-10 20:41:54] -rw-------. 1 boincer umatlas    989548 Jan 10 18:11 agis_schedconf.cvmfs.json
[2026-01-10 20:41:54] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:11 agis_ddmendpoints.agis.ALL.json
[2026-01-10 20:41:54] drwx------. 5 boincer umatlas      4096 Jan 10 18:11 pilot3
[2026-01-10 20:41:54] -rw-r--r--. 1 boincer umatlas       530 Jan 10 20:28 boinc_task_state.xml
[2026-01-10 20:41:54] -rw-r--r--. 1 boincer umatlas      6660 Jan 10 20:38 init_data.xml
[2026-01-10 20:41:54] -rw-------. 1 boincer umatlas  46925605 Jan 10 20:41 HITS.47962010._002775.pool.root.1
[2026-01-10 20:41:54] -rw-------. 1 boincer umatlas      1033 Jan 10 20:41 memory_monitor_summary.json
[2026-01-10 20:41:54] -rw-------. 1 boincer umatlas   1690446 Jan 10 20:41 log.47962010._002775.job.log.tgz.1
[2026-01-10 20:41:54] -rw-------. 1 boincer umatlas      8571 Jan 10 20:41 heartbeat.json
[2026-01-10 20:41:54] -rw-------. 1 boincer umatlas        95 Jan 10 20:41 pilot_heartbeat.json
[2026-01-10 20:41:54] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 20:41 boinc_mmap_file
[2026-01-10 20:41:54] -rw-r--r--. 1 boincer umatlas        27 Jan 10 20:41 wrapper_checkpoint.txt
[2026-01-10 20:41:54] -rw-------. 1 boincer umatlas       822 Jan 10 20:41 pilotlog.txt
[2026-01-10 20:41:54] -rw-------. 1 boincer umatlas   1174129 Jan 10 20:41 log.47962010._002775.job.log.1
[2026-01-10 20:41:54] -rw-------. 1 boincer umatlas       353 Jan 10 20:41 output.list
[2026-01-10 20:41:54] -rw-r--r--. 1 boincer umatlas       620 Jan 10 20:41 runtime_log
[2026-01-10 20:41:54] -rw-------. 1 boincer umatlas   2887680 Jan 10 20:41 result.tar.gz
[2026-01-10 20:41:54] -rw-r--r--. 1 boincer umatlas      9344 Jan 10 20:41 runtime_log.err
[2026-01-10 20:41:54] -rw-------. 1 boincer umatlas       654 Jan 10 20:41 iLiKDmJCxy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkehKDmjmBoDm.diag
[2026-01-10 20:41:54] -rw-r--r--. 1 boincer umatlas     21200 Jan 10 20:41 stderr.txt
[2026-01-10 20:41:54] HITS file was successfully produced:
[2026-01-10 20:41:54] -rw-------. 1 boincer umatlas 46925605 Jan 10 20:41 shared/HITS.pool.root.1
[2026-01-10 20:41:54]  *** Contents of shared directory: ***
[2026-01-10 20:41:54] total 432736
[2026-01-10 20:41:54] -rw-r--r--. 2 boincer umatlas 392691344 Jan 10 18:10 ATLAS.root_0
[2026-01-10 20:41:54] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 20:41:54] -rw-r--r--. 2 boincer umatlas    592612 Jan 10 18:10 input.tar.gz
[2026-01-10 20:41:54] -rw-------. 1 boincer umatlas  46925605 Jan 10 20:41 HITS.pool.root.1
[2026-01-10 20:41:54] -rw-------. 1 boincer umatlas   2887680 Jan 10 20:41 result.tar.gz
20:41:55 (3128504): run_atlas exited; CPU time 19173.148527
20:41:55 (3128504): called boinc_finish(0)

</stderr_txt>
]]>

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