Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:48:47 (3951364): wrapper (7.7.26015): starting
19:48:47 (3951364): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 19:48:47] Arguments: --nthreads 11
[2026-01-10 19:48:47] Threads: 11
[2026-01-10 19:48:47] Checking for CVMFS
[2026-01-10 19:48:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 19:48:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 19:48:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 19:49:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 19:49:08] 2.13.3.0 10954 95589 399284 154998 3 164 28940917 32935937 12674 16776704 26 363334394 99.474 529784300 38292 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 19:49:08] CVMFS is ok
[2026-01-10 19:49:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 19:49:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 19:49:08] Further information can be found at the LHC@home message board.
[2026-01-10 19:49:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 19:49:08] Checking for apptainer binary...
[2026-01-10 19:49:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 19:49:08] Running /usr/bin/apptainer --version
[2026-01-10 19:49:08] apptainer version 1.4.5-2.el9
[2026-01-10 19:49:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 19:49:09] c7-11-13.aglt2.org
[2026-01-10 19:49:09] apptainer works
[2026-01-10 19:49:09] Set ATHENA_PROC_NUMBER=11
[2026-01-10 19:49:09] Set ATHENA_CORE_NUMBER=11
[2026-01-10 19:49:09] Starting ATLAS job with PandaID=6965803351
[2026-01-10 19:49:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 20:51:55]  *** The last 200 lines of the pilot log: ***
[2026-01-10 20:51:55] 2026-01-11 01:50:23,978 | INFO     |  -- lfn=log.47962010._002803.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 20:51:55] 2026-01-11 01:50:23,978 | INFO     | stage-out finished correctly
[2026-01-10 20:51:55] 2026-01-11 01:50:25,082 | INFO     | monitor loop #262: job 0:6965803351 is in state 'finished'
[2026-01-10 20:51:55] 2026-01-11 01:50:25,082 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:51:55] 2026-01-11 01:50:25,506 | INFO     | time since job start (3644s) is within the limit (349056.0s)
[2026-01-10 20:51:55] 2026-01-11 01:50:26,231 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 20:51:55] 2026-01-11 01:50:26,697 | INFO     | job 6965803351 has state=finished
[2026-01-10 20:51:55] 2026-01-11 01:50:26,697 | INFO     | preparing for final server update for job 6965803351 in state='finished'
[2026-01-10 20:51:55] 2026-01-11 01:50:26,697 | INFO     | this job has now completed (state=finished)
[2026-01-10 20:51:55] 2026-01-11 01:50:26,698 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 20:51:55] 2026-01-11 01:50:26,698 | INFO     | log transfer has been attempted: DONE
[2026-01-10 20:51:55] 2026-01-11 01:50:26,698 | INFO     | job 6965803351 has finished - writing final server update
[2026-01-10 20:51:55] 2026-01-11 01:50:26,698 | INFO     | total number of processed events: 50 (read)
[2026-01-10 20:51:55] 2026-01-11 01:50:26,698 | INFO     | executing command: lscpu
[2026-01-10 20:51:55] 2026-01-11 01:50:26,806 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 20:51:55] 2026-01-11 01:50:27,536 | INFO     | time since job start (3646s) is within the limit (349056.0s)
[2026-01-10 20:51:55] 2026-01-11 01:50:27,589 | INFO     | monitor loop #263: job 0:6965803351 is in state 'finished'
[2026-01-10 20:51:55] 2026-01-11 01:50:27,589 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:51:55] 2026-01-11 01:50:29,543 | INFO     | time since job start (3648s) is within the limit (349056.0s)
[2026-01-10 20:51:55] 2026-01-11 01:50:30,094 | INFO     | monitor loop #264: job 0:6965803351 is in state 'finished'
[2026-01-10 20:51:55] 2026-01-11 01:50:30,094 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:51:55] 2026-01-11 01:50:31,550 | INFO     | time since job start (3650s) is within the limit (349056.0s)
[2026-01-10 20:51:55] 2026-01-11 01:50:32,603 | INFO     | monitor loop #265: job 0:6965803351 is in state 'finished'
[2026-01-10 20:51:55] 2026-01-11 01:50:32,607 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:51:55] 2026-01-11 01:50:33,564 | INFO     | time since job start (3652s) is within the limit (349056.0s)
[2026-01-10 20:51:55] 2026-01-11 01:50:35,112 | INFO     | monitor loop #266: job 0:6965803351 is in state 'finished'
[2026-01-10 20:51:55] 2026-01-11 01:50:35,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:51:55] 2026-01-11 01:50:35,571 | INFO     | time since job start (3654s) is within the limit (349056.0s)
[2026-01-10 20:51:55] 2026-01-11 01:50:37,578 | INFO     | time since job start (3656s) is within the limit (349056.0s)
[2026-01-10 20:51:55] 2026-01-11 01:50:37,619 | INFO     | monitor loop #267: job 0:6965803351 is in state 'finished'
[2026-01-10 20:51:55] 2026-01-11 01:50:37,619 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:51:55] 2026-01-11 01:50:39,585 | INFO     | time since job start (3658s) is within the limit (349056.0s)
[2026-01-10 20:51:55] 2026-01-11 01:50:40,137 | INFO     | monitor loop #268: job 0:6965803351 is in state 'finished'
[2026-01-10 20:51:55] 2026-01-11 01:50:40,137 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:51:55] 2026-01-11 01:50:41,592 | INFO     | time since job start (3660s) is within the limit (349056.0s)
[2026-01-10 20:51:55] 2026-01-11 01:50:42,641 | INFO     | monitor loop #269: job 0:6965803351 is in state 'finished'
[2026-01-10 20:51:55] 2026-01-11 01:50:42,641 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:51:55] 2026-01-11 01:50:43,603 | INFO     | time since job start (3662s) is within the limit (349056.0s)
[2026-01-10 20:51:55] 2026-01-11 01:50:44,818 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 20:51:55] 2026-01-11 01:50:44,892 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3292.851609374999
[2026-01-10 20:51:55] 2026-01-11 01:50:44,902 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965803351/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 20:51:55] 2026-01-11 01:50:44,903 | INFO     | extracted standard info from prmon json
[2026-01-10 20:51:55] 2026-01-11 01:50:44,903 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 20:51:55] 2026-01-11 01:50:44,903 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 20:51:55] 2026-01-11 01:50:44,904 | INFO     | fitting pss+swap vs Time
[2026-01-10 20:51:55] 2026-01-11 01:50:44,904 | INFO     | sum of square deviations: 43634539.07692311
[2026-01-10 20:51:55] 2026-01-11 01:50:44,905 | INFO     | sum of deviations: 2535882681.846154
[2026-01-10 20:51:55] 2026-01-11 01:50:44,905 | INFO     | mean x: 1768094501.3076923
[2026-01-10 20:51:55] 2026-01-11 01:50:44,905 | INFO     | mean y: 2817762.3846153845
[2026-01-10 20:51:55] 2026-01-11 01:50:44,905 | INFO     | intersect: -102752483899.66187
[2026-01-10 20:51:55] 2026-01-11 01:50:44,905 | INFO     | chi2: 0.8115370402813664
[2026-01-10 20:51:55] 2026-01-11 01:50:44,905 | INFO     | current memory leak: 58.12 B/s (using 52 data points, chi2=0.81)
[2026-01-10 20:51:55] 2026-01-11 01:50:44,905 | INFO     | could have reported an average CPU frequency of 3291 MHz (6 samples)
[2026-01-10 20:51:55] 2026-01-11 01:50:44,905 | INFO     | ..............................
[2026-01-10 20:51:55] 2026-01-11 01:50:44,905 | INFO     | . Timing measurements:
[2026-01-10 20:51:55] 2026-01-11 01:50:44,906 | INFO     | . get job = 0 s
[2026-01-10 20:51:55] 2026-01-11 01:50:44,906 | INFO     | . initial setup = 3 s
[2026-01-10 20:51:55] 2026-01-11 01:50:44,906 | INFO     | . payload setup = 15 s
[2026-01-10 20:51:55] 2026-01-11 01:50:44,906 | INFO     | . stage-in = 0 s
[2026-01-10 20:51:55] 2026-01-11 01:50:44,906 | INFO     | . payload execution = 3585 s
[2026-01-10 20:51:55] 2026-01-11 01:50:44,906 | INFO     | . stage-out = 0 s
[2026-01-10 20:51:55] 2026-01-11 01:50:44,906 | INFO     | . log creation = 0 s
[2026-01-10 20:51:55] 2026-01-11 01:50:44,906 | INFO     | ..............................
[2026-01-10 20:51:55] 2026-01-11 01:50:45,333 | INFO     | 
[2026-01-10 20:51:55] 2026-01-11 01:50:45,333 | INFO     | job summary report
[2026-01-10 20:51:55] 2026-01-11 01:50:45,333 | INFO     | --------------------------------------------------
[2026-01-10 20:51:55] 2026-01-11 01:50:45,333 | INFO     | PanDA job id: 6965803351
[2026-01-10 20:51:55] 2026-01-11 01:50:45,333 | INFO     | task id: 47962010
[2026-01-10 20:51:55] 2026-01-11 01:50:45,333 | INFO     | errors: (none)
[2026-01-10 20:51:55] 2026-01-11 01:50:45,333 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 20:51:55] 2026-01-11 01:50:45,333 | INFO     | pilot state: finished 
[2026-01-10 20:51:55] 2026-01-11 01:50:45,333 | INFO     | transexitcode: 0
[2026-01-10 20:51:55] 2026-01-11 01:50:45,333 | INFO     | exeerrorcode: 0
[2026-01-10 20:51:55] 2026-01-11 01:50:45,333 | INFO     | exeerrordiag: 
[2026-01-10 20:51:55] 2026-01-11 01:50:45,333 | INFO     | exitcode: 0
[2026-01-10 20:51:55] 2026-01-11 01:50:45,333 | INFO     | exitmsg: OK
[2026-01-10 20:51:55] 2026-01-11 01:50:45,334 | INFO     | cpuconsumptiontime: 11685 s
[2026-01-10 20:51:55] 2026-01-11 01:50:45,334 | INFO     | nevents: 50
[2026-01-10 20:51:55] 2026-01-11 01:50:45,334 | INFO     | neventsw: 0
[2026-01-10 20:51:55] 2026-01-11 01:50:45,334 | INFO     | pid: 3963896
[2026-01-10 20:51:55] 2026-01-11 01:50:45,334 | INFO     | pgrp: 3963896
[2026-01-10 20:51:55] 2026-01-11 01:50:45,334 | INFO     | corecount: 11
[2026-01-10 20:51:55] 2026-01-11 01:50:45,334 | INFO     | event service: False
[2026-01-10 20:51:55] 2026-01-11 01:50:45,334 | INFO     | sizes: {0: 2284567, 1: 2284595, 12: 2284595, 21: 2284885, 22: 2284913, 3605: 2311745, 3606: 2320739, 3609: 2320795, 3627: 2320819}
[2026-01-10 20:51:55] 2026-01-11 01:50:45,334 | INFO     | --------------------------------------------------
[2026-01-10 20:51:55] 2026-01-11 01:50:45,334 | INFO     | 
[2026-01-10 20:51:55] 2026-01-11 01:50:45,334 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 20:51:55] 2026-01-11 01:50:45,544 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 20:51:55] 2026-01-11 01:50:45,544 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 20:51:55] 2026-01-11 01:50:45,544 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 20:51:55] 2026-01-11 01:50:45,544 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 20:51:55] 2026-01-11 01:50:45,544 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 20:51:55] 2026-01-11 01:50:45,544 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 20:51:55] 2026-01-11 01:50:45,544 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 20:51:55] 2026-01-11 01:50:45,544 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 20:51:55] 2026-01-11 01:50:45,545 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 20:51:55] 2026-01-11 01:50:45,545 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 20:51:55] 2026-01-11 01:50:45,545 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 20:51:55] 2026-01-11 01:50:45,545 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 20:51:55] 2026-01-11 01:50:45,545 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 20:51:55] 2026-01-11 01:50:45,545 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 20:51:55] 2026-01-11 01:50:45,545 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 20:51:55] 2026-01-11 01:50:45,545 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 20:51:55] 2026-01-11 01:50:45,545 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 20:51:55] 2026-01-11 01:50:45,545 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 20:51:55] 2026-01-11 01:50:45,545 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 20:51:55] 2026-01-11 01:50:45,545 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 20:51:55] 2026-01-11 01:50:45,546 | INFO     | job 6965803351 has completed (purged errors)
[2026-01-10 20:51:55] 2026-01-11 01:50:45,546 | INFO     | overall cleanup function is called
[2026-01-10 20:51:55] 2026-01-11 01:50:45,613 | INFO     | PID=3955269 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 20:51:55] 2026-01-11 01:50:45,613 | INFO     | .. there are 10 such processes running
[2026-01-10 20:51:55] 2026-01-11 01:50:46,599 | INFO     | --- collectZombieJob: --- 10, [3963896]
[2026-01-10 20:51:55] 2026-01-11 01:50:46,599 | INFO     | zombie collector waiting for pid 3963896
[2026-01-10 20:51:55] 2026-01-11 01:50:46,599 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 20:51:55] 2026-01-11 01:50:46,599 | INFO     | collected zombie processes
[2026-01-10 20:51:55] 2026-01-11 01:50:46,599 | INFO     | will attempt to kill all subprocesses of pid=3963896
[2026-01-10 20:51:55] 2026-01-11 01:50:47,280 | INFO     | process IDs to be killed: [3963896] (in reverse order)
[2026-01-10 20:51:55] 2026-01-11 01:50:48,294 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 20:51:55] 2026-01-11 01:50:48,295 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 20:51:55] 2026-01-11 01:50:48,374 | INFO     | did not find any defunct processes belonging to 3963896
[2026-01-10 20:51:55] 2026-01-11 01:50:48,421 | INFO     | did not find any defunct processes belonging to 3963896
[2026-01-10 20:51:55] 2026-01-11 01:50:48,421 | INFO     | ready for new job
[2026-01-10 20:51:55] 2026-01-11 01:50:48,421 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 20:51:55] 2026-01-11 01:50:48,435 | INFO     | ***************************************
[2026-01-10 20:51:55] 2026-01-11 01:50:48,435 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 20:51:55] 2026-01-11 01:50:48,435 | INFO     | ***************************************
[2026-01-10 20:51:55] 2026-01-11 01:50:48,435 | INFO     | 
[2026-01-10 20:51:55] 2026-01-11 01:50:48,443 | INFO     | architecture information:
[2026-01-10 20:51:55] 2026-01-11 01:50:48,452 | INFO     | executing command: cat /etc/os-release
[2026-01-10 20:51:55] 2026-01-11 01:50:48,597 | INFO     | cat /etc/os-release:
[2026-01-10 20:51:55] NAME="CentOS Linux"
[2026-01-10 20:51:55] VERSION="7 (Core)"
[2026-01-10 20:51:55] ID="centos"
[2026-01-10 20:51:55] ID_LIKE="rhel fedora"
[2026-01-10 20:51:55] VERSION_ID="7"
[2026-01-10 20:51:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 20:51:55] ANSI_COLOR="0;31"
[2026-01-10 20:51:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 20:51:55] HOME_URL="https://www.centos.org/"
[2026-01-10 20:51:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 20:51:55] 
[2026-01-10 20:51:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 20:51:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 20:51:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 20:51:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 20:51:55] 
[2026-01-10 20:51:55] 2026-01-11 01:50:48,597 | INFO     | ***************************************
[2026-01-10 20:51:55] 2026-01-11 01:50:49,101 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 20:51:55] 2026-01-11 01:50:49,266 | INFO     | sufficient remaining disk space (95138349056 B)
[2026-01-10 20:51:55] 2026-01-11 01:50:49,266 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 20:51:55] 2026-01-11 01:50:49,266 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 20:51:55] 2026-01-11 01:50:49,266 | INFO     | update_server=False
[2026-01-10 20:51:55] 2026-01-11 01:50:49,267 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 20:51:55] 2026-01-11 01:50:49,267 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:51:55] 2026-01-11 01:50:49,267 | INFO     | aborting loop
[2026-01-10 20:51:55] 2026-01-11 01:50:49,660 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 20:51:55] 2026-01-11 01:50:49,962 | INFO     | all job control threads have been joined
[2026-01-10 20:51:55] 2026-01-11 01:50:50,041 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:51:55] 2026-01-11 01:50:50,159 | INFO     | all data control threads have been joined
[2026-01-10 20:51:55] 2026-01-11 01:50:50,272 | INFO     | [job] retrieve thread has finished
[2026-01-10 20:51:55] 2026-01-11 01:50:50,272 | INFO     | [job] job monitor thread has finished
[2026-01-10 20:51:55] 2026-01-11 01:50:50,291 | INFO     | [job] validate thread has finished
[2026-01-10 20:51:55] 2026-01-11 01:50:50,360 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 20:51:55] 2026-01-11 01:50:50,370 | INFO     | [data] copytool_in thread has finished
[2026-01-10 20:51:55] 2026-01-11 01:50:50,763 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 20:51:55] 2026-01-11 01:50:50,767 | INFO     | all payload control threads have been joined
[2026-01-10 20:51:55] 2026-01-11 01:50:50,967 | INFO     | [job] control thread has finished
[2026-01-10 20:51:55] 2026-01-11 01:50:51,047 | INFO     | [job] queue monitor thread has finished
[2026-01-10 20:51:55] 2026-01-11 01:50:51,165 | INFO     | [data] control thread has finished
[2026-01-10 20:51:55] 2026-01-11 01:50:51,192 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 20:51:55] 2026-01-11 01:50:51,284 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 20:51:55] 2026-01-11 01:50:51,342 | INFO     | [payload] failed_post thread has finished
[2026-01-10 20:51:55] 2026-01-11 01:50:51,587 | INFO     | [payload] validate_post thread has finished
[2026-01-10 20:51:55] 2026-01-11 01:50:51,653 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 20:51:55] 2026-01-11 01:50:51,667 | INFO     | [data] copytool_out thread has finished
[2026-01-10 20:51:55] 2026-01-11 01:50:51,773 | INFO     | [payload] control thread has finished
[2026-01-10 20:51:55] 2026-01-11 01:50:54,778 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 20:51:55] 2026-01-11 01:51:18,680 | INFO     | PID=3955269 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 20:51:55] 2026-01-11 01:51:18,680 | INFO     | .. there are 10 such processes running
[2026-01-10 20:51:55] 2026-01-11 01:51:18,681 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 20:51:55] 2026-01-11 01:51:18,681 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 20:51:55] 2026-01-11 01:51:18,681 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 20:51:55] 2026-01-11 01:51:46,428 | INFO     | [monitor] cgroup control has ended
[2026-01-10 20:51:55] 2026-01-11 01:51:47,903 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139758004967232)>', '<ExcThread(monitor, started 139757656975104)>']
[2026-01-10 20:51:55] 2026-01-11 01:51:48,864 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 20:51:55] 2026-01-11 01:51:48,864 | INFO     | [monitor] control thread has ended
[2026-01-10 20:51:55] 2026-01-11 01:51:52,930 | INFO     | all workflow threads have been joined
[2026-01-10 20:51:55] 2026-01-11 01:51:52,930 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 20:51:55] 2026-01-11 01:51:52,930 | INFO     | traces error code: 0
[2026-01-10 20:51:55] 2026-01-11 01:51:52,930 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 20:51:55] 2026-01-11 01:51:53,884 [wrapper] ==== pilot stdout END ====
[2026-01-10 20:51:55] 2026-01-11 01:51:53,912 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 20:51:55] 2026-01-11 01:51:53,926 [wrapper] pilotpid: 3955269
[2026-01-10 20:51:55] 2026-01-11 01:51:53,968 [wrapper] Pilot exit status: 0
[2026-01-10 20:51:55] 2026-01-11 01:51:54,103 [wrapper] pandaids: 6965803351
[2026-01-10 20:51:55] 2026-01-11 01:51:54,547 [wrapper] cleanup supervisor_pilot 4043464 3955270
[2026-01-10 20:51:55] 2026-01-11 01:51:54,555 [wrapper] Test setup, not cleaning
[2026-01-10 20:51:55] 2026-01-11 01:51:54,585 [wrapper] apfmon messages muted
[2026-01-10 20:51:55] 2026-01-11 01:51:54,620 [wrapper] ==== wrapper stdout END ====
[2026-01-10 20:51:55] 2026-01-11 01:51:54,669 [wrapper] ==== wrapper stderr END ====
[2026-01-10 20:51:55]  *** Error codes and diagnostics ***
[2026-01-10 20:51:55]     "exeErrorCode": 0,
[2026-01-10 20:51:55]     "exeErrorDiag": "",
[2026-01-10 20:51:55]     "pilotErrorCode": 0,
[2026-01-10 20:51:55]     "pilotErrorDiag": "",
[2026-01-10 20:51:55]  *** Listing of results directory ***
[2026-01-10 20:51:55] total 432956
[2026-01-10 20:51:55] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 20:51:55] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:03 queuedata.json
[2026-01-10 20:51:55] -rwx------. 1 boincer umatlas     36322 Jan 10 18:04 runpilot2-wrapper.sh
[2026-01-10 20:51:55] -rw-r--r--. 1 boincer umatlas       100 Jan 10 19:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 20:51:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 19:48 run_atlas
[2026-01-10 20:51:55] -rw-r--r--. 1 boincer umatlas       105 Jan 10 19:48 job.xml
[2026-01-10 20:51:55] -rw-r--r--. 2 boincer umatlas 391949667 Jan 10 19:48 EVNT.47962006._000105.pool.root.1
[2026-01-10 20:51:55] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 19:48 start_atlas.sh
[2026-01-10 20:51:55] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 19:48 shared
[2026-01-10 20:51:55] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 19:48 input.tar.gz
[2026-01-10 20:51:55] -rw-r--r--. 1 boincer umatlas         0 Jan 10 19:48 boinc_lockfile
[2026-01-10 20:51:55] -rw-r--r--. 1 boincer umatlas      2889 Jan 10 19:49 pandaJob.out
[2026-01-10 20:51:55] -rw-------. 1 boincer umatlas        57 Jan 10 19:49 setup.sh.local
[2026-01-10 20:51:55] -rw-------. 1 boincer umatlas    989540 Jan 10 19:49 agis_schedconf.cvmfs.json
[2026-01-10 20:51:55] -rw-------. 1 boincer umatlas   1516240 Jan 10 19:49 agis_ddmendpoints.agis.ALL.json
[2026-01-10 20:51:55] drwx------. 5 boincer umatlas      4096 Jan 10 19:49 pilot3
[2026-01-10 20:51:55] -rw-r--r--. 1 boincer umatlas       529 Jan 10 20:42 boinc_task_state.xml
[2026-01-10 20:51:55] -rw-r--r--. 1 boincer umatlas      6902 Jan 10 20:49 init_data.xml
[2026-01-10 20:51:55] -rw-------. 1 boincer umatlas  43381271 Jan 10 20:50 HITS.47962010._002803.pool.root.1
[2026-01-10 20:51:55] -rw-------. 1 boincer umatlas      1029 Jan 10 20:50 memory_monitor_summary.json
[2026-01-10 20:51:55] -rw-------. 1 boincer umatlas   1495481 Jan 10 20:50 log.47962010._002803.job.log.tgz.1
[2026-01-10 20:51:55] -rw-------. 1 boincer umatlas      8526 Jan 10 20:50 heartbeat.json
[2026-01-10 20:51:55] -rw-------. 1 boincer umatlas        95 Jan 10 20:51 pilot_heartbeat.json
[2026-01-10 20:51:55] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 20:51 boinc_mmap_file
[2026-01-10 20:51:55] -rw-r--r--. 1 boincer umatlas        27 Jan 10 20:51 wrapper_checkpoint.txt
[2026-01-10 20:51:55] -rw-------. 1 boincer umatlas      4824 Jan 10 20:51 pilotlog.txt
[2026-01-10 20:51:55] -rw-------. 1 boincer umatlas    550008 Jan 10 20:51 log.47962010._002803.job.log.1
[2026-01-10 20:51:55] -rw-------. 1 boincer umatlas       353 Jan 10 20:51 output.list
[2026-01-10 20:51:55] -rw-r--r--. 1 boincer umatlas       620 Jan 10 20:51 runtime_log
[2026-01-10 20:51:55] -rw-------. 1 boincer umatlas   2068480 Jan 10 20:51 result.tar.gz
[2026-01-10 20:51:55] -rw-------. 1 boincer umatlas       653 Jan 10 20:51 VuSKDm2Bxy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQwmKDmW189sn.diag
[2026-01-10 20:51:55] -rw-r--r--. 1 boincer umatlas      9344 Jan 10 20:51 runtime_log.err
[2026-01-10 20:51:55] -rw-r--r--. 1 boincer umatlas     22406 Jan 10 20:51 stderr.txt
[2026-01-10 20:51:55] HITS file was successfully produced:
[2026-01-10 20:51:55] -rw-------. 1 boincer umatlas 43381271 Jan 10 20:50 shared/HITS.pool.root.1
[2026-01-10 20:51:55]  *** Contents of shared directory: ***
[2026-01-10 20:51:55] total 427752
[2026-01-10 20:51:55] -rw-r--r--. 2 boincer umatlas 391949667 Jan 10 19:48 ATLAS.root_0
[2026-01-10 20:51:55] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 19:48 start_atlas.sh
[2026-01-10 20:51:55] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 19:48 input.tar.gz
[2026-01-10 20:51:55] -rw-------. 1 boincer umatlas  43381271 Jan 10 20:50 HITS.pool.root.1
[2026-01-10 20:51:55] -rw-------. 1 boincer umatlas   2068480 Jan 10 20:51 result.tar.gz
20:51:57 (3951364): run_atlas exited; CPU time 11592.310338
20:51:57 (3951364): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN