Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:39:56 (1449332): wrapper (7.7.26015): starting
18:39:56 (1449332): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 18:39:56] Arguments: --nthreads 9
[2026-01-10 18:39:56] Threads: 9
[2026-01-10 18:39:56] Checking for CVMFS
[2026-01-10 18:39:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:39:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:39:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:39:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:39:58] 2.13.3.0 10749 51836 496368 154997 2 283 21290195 32935936 56686 16776704 0 545488009 99.786 290962058 29009 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 18:39:58] CVMFS is ok
[2026-01-10 18:39:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:39:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:39:58] Further information can be found at the LHC@home message board.
[2026-01-10 18:39:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:39:58] Checking for apptainer binary...
[2026-01-10 18:39:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:39:58] Running /usr/bin/apptainer --version
[2026-01-10 18:39:59] apptainer version 1.4.5-2.el9
[2026-01-10 18:39:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:39:59] lc-12-33.aglt2.org
[2026-01-10 18:39:59] apptainer works
[2026-01-10 18:40:00] Set ATHENA_PROC_NUMBER=9
[2026-01-10 18:40:00] Set ATHENA_CORE_NUMBER=9
[2026-01-10 18:40:00] Starting ATLAS job with PandaID=6965803216
[2026-01-10 18:40:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 20:19:30]  *** The last 200 lines of the pilot log: ***
[2026-01-10 20:19:30]  workdir=None
[2026-01-10 20:19:30] ]
[2026-01-10 20:19:30] 2026-01-11 01:18:06,452 | INFO     | monitor loop #329: job 0:6965803216 is in state 'stageout'
[2026-01-10 20:19:30] 2026-01-11 01:18:06,453 | WARNING  | aborting job monitor tasks since payload process 1509574 is not running
[2026-01-10 20:19:30] 2026-01-11 01:18:06,499 | INFO     | transferring file log.47962010._002668.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6965803216/log.47962010._002668.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 20:19:30] 2026-01-11 01:18:06,499 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6965803216/log.47962010._002668.job.log.tgz.1 /tmp/boinchome/slots/3/log.47962010._002668.job
[2026-01-10 20:19:30] 2026-01-11 01:18:06,544 | INFO     | adding to output.list: log.47962010._002668.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/cb/38/log.47962010._002668.job.log.tgz.
[2026-01-10 20:19:30] 2026-01-11 01:18:06,545 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 20:19:30] 2026-01-11 01:18:06,545 | INFO     | summary of transferred files:
[2026-01-10 20:19:30] 2026-01-11 01:18:06,545 | INFO     |  -- lfn=log.47962010._002668.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 20:19:30] 2026-01-11 01:18:06,546 | INFO     | stage-out finished correctly
[2026-01-10 20:19:30] 2026-01-11 01:18:07,592 | INFO     | time since job start (5814s) is within the limit (349056.0s)
[2026-01-10 20:19:30] 2026-01-11 01:18:08,763 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 20:19:30] 2026-01-11 01:18:08,956 | INFO     | monitor loop #330: job 0:6965803216 is in state 'finished'
[2026-01-10 20:19:30] 2026-01-11 01:18:08,957 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:19:30] 2026-01-11 01:18:09,599 | INFO     | time since job start (5816s) is within the limit (349056.0s)
[2026-01-10 20:19:30] 2026-01-11 01:18:10,508 | INFO     | job 6965803216 has state=finished
[2026-01-10 20:19:30] 2026-01-11 01:18:10,509 | INFO     | preparing for final server update for job 6965803216 in state='finished'
[2026-01-10 20:19:30] 2026-01-11 01:18:10,509 | INFO     | this job has now completed (state=finished)
[2026-01-10 20:19:30] 2026-01-11 01:18:10,509 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 20:19:30] 2026-01-11 01:18:10,509 | INFO     | log transfer has been attempted: DONE
[2026-01-10 20:19:30] 2026-01-11 01:18:10,509 | INFO     | job 6965803216 has finished - writing final server update
[2026-01-10 20:19:30] 2026-01-11 01:18:10,509 | INFO     | total number of processed events: 50 (read)
[2026-01-10 20:19:30] 2026-01-11 01:18:10,512 | INFO     | executing command: lscpu
[2026-01-10 20:19:30] 2026-01-11 01:18:10,581 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 20:19:30] 2026-01-11 01:18:11,461 | INFO     | monitor loop #331: job 0:6965803216 is in state 'finished'
[2026-01-10 20:19:30] 2026-01-11 01:18:11,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:19:30] 2026-01-11 01:18:11,606 | INFO     | time since job start (5818s) is within the limit (349056.0s)
[2026-01-10 20:19:30] 2026-01-11 01:18:13,613 | INFO     | time since job start (5820s) is within the limit (349056.0s)
[2026-01-10 20:19:30] 2026-01-11 01:18:13,967 | INFO     | monitor loop #332: job 0:6965803216 is in state 'finished'
[2026-01-10 20:19:30] 2026-01-11 01:18:13,967 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:19:30] 2026-01-11 01:18:15,619 | INFO     | time since job start (5822s) is within the limit (349056.0s)
[2026-01-10 20:19:30] 2026-01-11 01:18:16,472 | INFO     | monitor loop #333: job 0:6965803216 is in state 'finished'
[2026-01-10 20:19:30] 2026-01-11 01:18:16,472 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:19:30] 2026-01-11 01:18:17,628 | INFO     | time since job start (5824s) is within the limit (349056.0s)
[2026-01-10 20:19:30] 2026-01-11 01:18:18,977 | INFO     | monitor loop #334: job 0:6965803216 is in state 'finished'
[2026-01-10 20:19:30] 2026-01-11 01:18:18,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:19:30] 2026-01-11 01:18:19,636 | INFO     | time since job start (5826s) is within the limit (349056.0s)
[2026-01-10 20:19:30] 2026-01-11 01:18:20,668 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 20:19:30] 2026-01-11 01:18:20,673 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3023.0476770833334
[2026-01-10 20:19:30] 2026-01-11 01:18:20,692 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965803216/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 20:19:30] 2026-01-11 01:18:20,693 | INFO     | extracted standard info from prmon json
[2026-01-10 20:19:30] 2026-01-11 01:18:20,693 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 20:19:30] 2026-01-11 01:18:20,693 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 20:19:30] 2026-01-11 01:18:20,696 | INFO     | fitting pss+swap vs Time
[2026-01-10 20:19:30] 2026-01-11 01:18:20,696 | INFO     | sum of square deviations: 197167258.98837242
[2026-01-10 20:19:30] 2026-01-11 01:18:20,696 | INFO     | sum of deviations: 44404985865.90699
[2026-01-10 20:19:30] 2026-01-11 01:18:20,697 | INFO     | mean x: 1768091528.988372
[2026-01-10 20:19:30] 2026-01-11 01:18:20,697 | INFO     | mean y: 2453015.906976744
[2026-01-10 20:19:30] 2026-01-11 01:18:20,697 | INFO     | intersect: -398197936628.8497
[2026-01-10 20:19:30] 2026-01-11 01:18:20,697 | INFO     | chi2: 4.040051302712064
[2026-01-10 20:19:30] 2026-01-11 01:18:20,697 | INFO     | current memory leak: 225.21 B/s (using 86 data points, chi2=4.04)
[2026-01-10 20:19:30] 2026-01-11 01:18:20,697 | INFO     | could have reported an average CPU frequency of 2975 MHz (7 samples)
[2026-01-10 20:19:30] 2026-01-11 01:18:20,698 | INFO     | ..............................
[2026-01-10 20:19:30] 2026-01-11 01:18:20,698 | INFO     | . Timing measurements:
[2026-01-10 20:19:30] 2026-01-11 01:18:20,698 | INFO     | . get job = 0 s
[2026-01-10 20:19:30] 2026-01-11 01:18:20,698 | INFO     | . initial setup = 9 s
[2026-01-10 20:19:30] 2026-01-11 01:18:20,698 | INFO     | . payload setup = 50 s
[2026-01-10 20:19:30] 2026-01-11 01:18:20,698 | INFO     | . stage-in = 0 s
[2026-01-10 20:19:30] 2026-01-11 01:18:20,699 | INFO     | . payload execution = 5684 s
[2026-01-10 20:19:30] 2026-01-11 01:18:20,699 | INFO     | . stage-out = 1 s
[2026-01-10 20:19:30] 2026-01-11 01:18:20,699 | INFO     | . log creation = 0 s
[2026-01-10 20:19:30] 2026-01-11 01:18:20,699 | INFO     | ..............................
[2026-01-10 20:19:30] 2026-01-11 01:18:21,202 | INFO     | 
[2026-01-10 20:19:30] 2026-01-11 01:18:21,203 | INFO     | job summary report
[2026-01-10 20:19:30] 2026-01-11 01:18:21,203 | INFO     | --------------------------------------------------
[2026-01-10 20:19:30] 2026-01-11 01:18:21,203 | INFO     | PanDA job id: 6965803216
[2026-01-10 20:19:30] 2026-01-11 01:18:21,203 | INFO     | task id: 47962010
[2026-01-10 20:19:30] 2026-01-11 01:18:21,203 | INFO     | errors: (none)
[2026-01-10 20:19:30] 2026-01-11 01:18:21,203 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 20:19:30] 2026-01-11 01:18:21,203 | INFO     | pilot state: finished 
[2026-01-10 20:19:30] 2026-01-11 01:18:21,203 | INFO     | transexitcode: 0
[2026-01-10 20:19:30] 2026-01-11 01:18:21,203 | INFO     | exeerrorcode: 0
[2026-01-10 20:19:30] 2026-01-11 01:18:21,203 | INFO     | exeerrordiag: 
[2026-01-10 20:19:30] 2026-01-11 01:18:21,203 | INFO     | exitcode: 0
[2026-01-10 20:19:30] 2026-01-11 01:18:21,203 | INFO     | exitmsg: OK
[2026-01-10 20:19:30] 2026-01-11 01:18:21,203 | INFO     | cpuconsumptiontime: 16245 s
[2026-01-10 20:19:30] 2026-01-11 01:18:21,203 | INFO     | nevents: 50
[2026-01-10 20:19:30] 2026-01-11 01:18:21,203 | INFO     | neventsw: 0
[2026-01-10 20:19:30] 2026-01-11 01:18:21,203 | INFO     | pid: 1509574
[2026-01-10 20:19:30] 2026-01-11 01:18:21,203 | INFO     | pgrp: 1509574
[2026-01-10 20:19:30] 2026-01-11 01:18:21,204 | INFO     | corecount: 9
[2026-01-10 20:19:30] 2026-01-11 01:18:21,204 | INFO     | event service: False
[2026-01-10 20:19:30] 2026-01-11 01:18:21,204 | INFO     | sizes: {0: 2284398, 1: 2284483, 2: 2284597, 3: 2284625, 14: 2284653, 26: 2284681, 32: 2285099, 37: 2285127, 5739: 2312426, 5741: 2321420, 5743: 2321476, 5755: 2322
[2026-01-10 20:19:30] 2026-01-11 01:18:21,204 | INFO     | --------------------------------------------------
[2026-01-10 20:19:30] 2026-01-11 01:18:21,204 | INFO     | 
[2026-01-10 20:19:30] 2026-01-11 01:18:21,204 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 20:19:30] 2026-01-11 01:18:21,260 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 20:19:30] 2026-01-11 01:18:21,260 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 20:19:30] 2026-01-11 01:18:21,260 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 20:19:30] 2026-01-11 01:18:21,260 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 20:19:30] 2026-01-11 01:18:21,260 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 20:19:30] 2026-01-11 01:18:21,261 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 20:19:30] 2026-01-11 01:18:21,261 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 20:19:30] 2026-01-11 01:18:21,261 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 20:19:30] 2026-01-11 01:18:21,261 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 20:19:30] 2026-01-11 01:18:21,261 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 20:19:30] 2026-01-11 01:18:21,261 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 20:19:30] 2026-01-11 01:18:21,261 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 20:19:30] 2026-01-11 01:18:21,261 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 20:19:30] 2026-01-11 01:18:21,261 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 20:19:30] 2026-01-11 01:18:21,261 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 20:19:30] 2026-01-11 01:18:21,261 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 20:19:30] 2026-01-11 01:18:21,262 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 20:19:30] 2026-01-11 01:18:21,262 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 20:19:30] 2026-01-11 01:18:21,262 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 20:19:30] 2026-01-11 01:18:21,262 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 20:19:30] 2026-01-11 01:18:21,262 | INFO     | job 6965803216 has completed (purged errors)
[2026-01-10 20:19:30] 2026-01-11 01:18:21,262 | INFO     | overall cleanup function is called
[2026-01-10 20:19:30] 2026-01-11 01:18:22,277 | INFO     | --- collectZombieJob: --- 10, [1509574]
[2026-01-10 20:19:30] 2026-01-11 01:18:22,278 | INFO     | zombie collector waiting for pid 1509574
[2026-01-10 20:19:30] 2026-01-11 01:18:22,278 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 20:19:30] 2026-01-11 01:18:22,278 | INFO     | collected zombie processes
[2026-01-10 20:19:30] 2026-01-11 01:18:22,278 | INFO     | will attempt to kill all subprocesses of pid=1509574
[2026-01-10 20:19:30] 2026-01-11 01:18:22,952 | INFO     | process IDs to be killed: [1509574] (in reverse order)
[2026-01-10 20:19:30] 2026-01-11 01:18:23,174 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 20:19:30] 2026-01-11 01:18:23,174 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 20:19:30] 2026-01-11 01:18:23,212 | INFO     | did not find any defunct processes belonging to 1509574
[2026-01-10 20:19:30] 2026-01-11 01:18:23,242 | INFO     | did not find any defunct processes belonging to 1509574
[2026-01-10 20:19:30] 2026-01-11 01:18:23,242 | INFO     | ready for new job
[2026-01-10 20:19:30] 2026-01-11 01:18:23,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 20:19:30] 2026-01-11 01:18:23,244 | INFO     | ***************************************
[2026-01-10 20:19:30] 2026-01-11 01:18:23,244 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 20:19:30] 2026-01-11 01:18:23,244 | INFO     | ***************************************
[2026-01-10 20:19:30] 2026-01-11 01:18:23,244 | INFO     | 
[2026-01-10 20:19:30] 2026-01-11 01:18:23,252 | INFO     | architecture information:
[2026-01-10 20:19:30] 2026-01-11 01:18:23,252 | INFO     | executing command: cat /etc/os-release
[2026-01-10 20:19:30] 2026-01-11 01:18:23,285 | INFO     | cat /etc/os-release:
[2026-01-10 20:19:30] NAME="CentOS Linux"
[2026-01-10 20:19:30] VERSION="7 (Core)"
[2026-01-10 20:19:30] ID="centos"
[2026-01-10 20:19:30] ID_LIKE="rhel fedora"
[2026-01-10 20:19:30] VERSION_ID="7"
[2026-01-10 20:19:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 20:19:30] ANSI_COLOR="0;31"
[2026-01-10 20:19:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 20:19:30] HOME_URL="https://www.centos.org/"
[2026-01-10 20:19:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 20:19:30] 
[2026-01-10 20:19:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 20:19:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 20:19:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 20:19:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 20:19:30] 
[2026-01-10 20:19:30] 2026-01-11 01:18:23,285 | INFO     | ***************************************
[2026-01-10 20:19:30] 2026-01-11 01:18:23,788 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 20:19:30] 2026-01-11 01:18:23,859 | INFO     | sufficient remaining disk space (76317458432 B)
[2026-01-10 20:19:30] 2026-01-11 01:18:23,859 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 20:19:30] 2026-01-11 01:18:23,859 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 20:19:30] 2026-01-11 01:18:23,859 | INFO     | update_server=False
[2026-01-10 20:19:30] 2026-01-11 01:18:23,859 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 20:19:30] 2026-01-11 01:18:23,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 20:19:30] 2026-01-11 01:18:24,005 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 20:19:30] 2026-01-11 01:18:24,006 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 20:19:30] 2026-01-11 01:18:24,009 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:19:30] 2026-01-11 01:18:24,010 | INFO     | will abort loop
[2026-01-10 20:19:30] 2026-01-11 01:18:24,720 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 20:19:30] 2026-01-11 01:18:24,865 | INFO     | [job] retrieve thread has finished
[2026-01-10 20:19:30] 2026-01-11 01:18:24,930 | INFO     | all data control threads have been joined
[2026-01-10 20:19:30] 2026-01-11 01:18:25,015 | INFO     | [job] job monitor thread has finished
[2026-01-10 20:19:30] 2026-01-11 01:18:25,187 | INFO     | all job control threads have been joined
[2026-01-10 20:19:30] 2026-01-11 01:18:25,244 | INFO     | [payload] validate_post thread has finished
[2026-01-10 20:19:30] 2026-01-11 01:18:25,292 | INFO     | all payload control threads have been joined
[2026-01-10 20:19:30] 2026-01-11 01:18:25,426 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 20:19:30] 2026-01-11 01:18:25,692 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 20:19:30] 2026-01-11 01:18:25,790 | INFO     | [data] copytool_in thread has finished
[2026-01-10 20:19:30] 2026-01-11 01:18:25,819 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:19:30] 2026-01-11 01:18:25,936 | INFO     | [data] control thread has finished
[2026-01-10 20:19:30] 2026-01-11 01:18:26,014 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 20:19:30] 2026-01-11 01:18:26,016 | INFO     | [job] validate thread has finished
[2026-01-10 20:19:30] 2026-01-11 01:18:26,023 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 20:19:30] 2026-01-11 01:18:26,193 | INFO     | [job] control thread has finished
[2026-01-10 20:19:30] 2026-01-11 01:18:26,278 | INFO     | [payload] failed_post thread has finished
[2026-01-10 20:19:30] 2026-01-11 01:18:26,308 | INFO     | [payload] control thread has finished
[2026-01-10 20:19:30] 2026-01-11 01:18:26,728 | INFO     | [data] copytool_out thread has finished
[2026-01-10 20:19:30] 2026-01-11 01:18:26,831 | INFO     | [job] queue monitor thread has finished
[2026-01-10 20:19:30] 2026-01-11 01:18:27,896 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 20:19:30] 2026-01-11 01:18:53,770 | INFO     | PID=1472801 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 20:19:30] 2026-01-11 01:18:53,771 | INFO     | .. there are 79 such processes running
[2026-01-10 20:19:30] 2026-01-11 01:18:53,772 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 20:19:30] 2026-01-11 01:18:53,772 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 20:19:30] 2026-01-11 01:18:53,772 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 20:19:30] 2026-01-11 01:19:23,277 | INFO     | [monitor] cgroup control has ended
[2026-01-10 20:19:30] 2026-01-11 01:19:24,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140428829464384)>', '<ExcThread(monitor, started 140428477179648)>']
[2026-01-10 20:19:30] 2026-01-11 01:19:24,956 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 20:19:30] 2026-01-11 01:19:24,956 | INFO     | [monitor] control thread has ended
[2026-01-10 20:19:30] 2026-01-11 01:19:29,332 | INFO     | all workflow threads have been joined
[2026-01-10 20:19:30] 2026-01-11 01:19:29,343 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 20:19:30] 2026-01-11 01:19:29,344 | INFO     | traces error code: 0
[2026-01-10 20:19:30] 2026-01-11 01:19:29,344 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 20:19:30] 2026-01-11 01:19:29,617 [wrapper] ==== pilot stdout END ====
[2026-01-10 20:19:30] 2026-01-11 01:19:29,637 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 20:19:30] 2026-01-11 01:19:29,648 [wrapper] pilotpid: 1472801
[2026-01-10 20:19:30] 2026-01-11 01:19:29,666 [wrapper] Pilot exit status: 0
[2026-01-10 20:19:30] 2026-01-11 01:19:29,714 [wrapper] pandaids: 6965803216
[2026-01-10 20:19:30] 2026-01-11 01:19:29,974 [wrapper] cleanup supervisor_pilot 2574733 1472802
[2026-01-10 20:19:30] 2026-01-11 01:19:29,996 [wrapper] Test setup, not cleaning
[2026-01-10 20:19:30] 2026-01-11 01:19:30,000 [wrapper] apfmon messages muted
[2026-01-10 20:19:30] 2026-01-11 01:19:30,008 [wrapper] ==== wrapper stdout END ====
[2026-01-10 20:19:30] 2026-01-11 01:19:30,020 [wrapper] ==== wrapper stderr END ====
[2026-01-10 20:19:30]  *** Error codes and diagnostics ***
[2026-01-10 20:19:30]     "exeErrorCode": 0,
[2026-01-10 20:19:30]     "exeErrorDiag": "",
[2026-01-10 20:19:30]     "pilotErrorCode": 0,
[2026-01-10 20:19:30]     "pilotErrorDiag": "",
[2026-01-10 20:19:30]  *** Listing of results directory ***
[2026-01-10 20:19:30] total 435788
[2026-01-10 20:19:30] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 20:19:30] -rwx------. 1 boincer umatlas     36322 Jan 10 18:05 runpilot2-wrapper.sh
[2026-01-10 20:19:30] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 20:19:30] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 20:19:30] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:39 run_atlas
[2026-01-10 20:19:30] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:39 job.xml
[2026-01-10 20:19:30] -rw-r--r--. 2 boincer umatlas 392179395 Jan 10 18:39 EVNT.47962006._000036.pool.root.1
[2026-01-10 20:19:30] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:39 start_atlas.sh
[2026-01-10 20:19:30] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:39 shared
[2026-01-10 20:19:30] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 18:39 input.tar.gz
[2026-01-10 20:19:30] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:39 boinc_lockfile
[2026-01-10 20:19:30] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 18:40 pandaJob.out
[2026-01-10 20:19:30] -rw-------. 1 boincer umatlas        57 Jan 10 18:40 setup.sh.local
[2026-01-10 20:19:30] -rw-------. 1 boincer umatlas    989548 Jan 10 18:41 agis_schedconf.cvmfs.json
[2026-01-10 20:19:30] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:41 agis_ddmendpoints.agis.ALL.json
[2026-01-10 20:19:30] drwx------. 5 boincer umatlas      4096 Jan 10 18:41 pilot3
[2026-01-10 20:19:30] -rw-r--r--. 1 boincer umatlas       529 Jan 10 20:09 boinc_task_state.xml
[2026-01-10 20:19:30] -rw-------. 1 boincer umatlas  46059297 Jan 10 20:17 HITS.47962010._002668.pool.root.1
[2026-01-10 20:19:30] -rw-------. 1 boincer umatlas      1047 Jan 10 20:18 memory_monitor_summary.json
[2026-01-10 20:19:30] -rw-------. 1 boincer umatlas   1328205 Jan 10 20:18 log.47962010._002668.job.log.tgz.1
[2026-01-10 20:19:30] -rw-------. 1 boincer umatlas      8580 Jan 10 20:18 heartbeat.json
[2026-01-10 20:19:30] -rw-r--r--. 1 boincer umatlas      6861 Jan 10 20:18 init_data.xml
[2026-01-10 20:19:30] -rw-------. 1 boincer umatlas        95 Jan 10 20:18 pilot_heartbeat.json
[2026-01-10 20:19:30] -rw-------. 1 boincer umatlas      5010 Jan 10 20:19 pilotlog.txt
[2026-01-10 20:19:30] -rw-r--r--. 1 boincer umatlas        27 Jan 10 20:19 wrapper_checkpoint.txt
[2026-01-10 20:19:30] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 20:19 boinc_mmap_file
[2026-01-10 20:19:30] -rw-------. 1 boincer umatlas    720493 Jan 10 20:19 log.47962010._002668.job.log.1
[2026-01-10 20:19:30] -rw-------. 1 boincer umatlas       353 Jan 10 20:19 output.list
[2026-01-10 20:19:30] -rw-r--r--. 1 boincer umatlas       620 Jan 10 20:19 runtime_log
[2026-01-10 20:19:30] -rw-------. 1 boincer umatlas   2068480 Jan 10 20:19 result.tar.gz
[2026-01-10 20:19:30] -rw-r--r--. 1 boincer umatlas      9342 Jan 10 20:19 runtime_log.err
[2026-01-10 20:19:30] -rw-------. 1 boincer umatlas       652 Jan 10 20:19 JYqNDmICxy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0dhKDmt7AlEn.diag
[2026-01-10 20:19:30] -rw-r--r--. 1 boincer umatlas     22457 Jan 10 20:19 stderr.txt
[2026-01-10 20:19:30] HITS file was successfully produced:
[2026-01-10 20:19:30] -rw-------. 1 boincer umatlas 46059297 Jan 10 20:17 shared/HITS.pool.root.1
[2026-01-10 20:19:30]  *** Contents of shared directory: ***
[2026-01-10 20:19:30] total 430584
[2026-01-10 20:19:30] -rw-r--r--. 2 boincer umatlas 392179395 Jan 10 18:39 ATLAS.root_0
[2026-01-10 20:19:30] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:39 start_atlas.sh
[2026-01-10 20:19:30] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 18:39 input.tar.gz
[2026-01-10 20:19:30] -rw-------. 1 boincer umatlas  46059297 Jan 10 20:17 HITS.pool.root.1
[2026-01-10 20:19:30] -rw-------. 1 boincer umatlas   2068480 Jan 10 20:19 result.tar.gz
20:19:31 (1449332): run_atlas exited; CPU time 16496.239937
20:19:31 (1449332): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN