Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:10:18 (207466): wrapper (7.7.26015): starting
18:10:18 (207466): wrapper: running run_atlas (--nthreads 10)
[2026-01-10 18:10:18] Arguments: --nthreads 10
[2026-01-10 18:10:18] Threads: 10
[2026-01-10 18:10:18] Checking for CVMFS
[2026-01-10 18:10:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:10:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:10:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:10:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:10:19] 2.13.3.0 12460 95491 216636 154996 2 65 28437014 32935936 23992 16776704 0 918402292 99.638 884301255 36112 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 18:10:19] CVMFS is ok
[2026-01-10 18:10:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:10:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:10:19] Further information can be found at the LHC@home message board.
[2026-01-10 18:10:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:10:19] Checking for apptainer binary...
[2026-01-10 18:10:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:10:19] Running /usr/bin/apptainer --version
[2026-01-10 18:10:19] apptainer version 1.4.5-2.el9
[2026-01-10 18:10:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:10:19] c7-6-31.aglt2.org
[2026-01-10 18:10:19] apptainer works
[2026-01-10 18:10:19] Set ATHENA_PROC_NUMBER=10
[2026-01-10 18:10:19] Set ATHENA_CORE_NUMBER=10
[2026-01-10 18:10:19] Starting ATLAS job with PandaID=6965803292
[2026-01-10 18:10:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 18:58:52]  *** The last 200 lines of the pilot log: ***
[2026-01-10 18:58:52]  is_tar=False
[2026-01-10 18:58:52]  lfn=log.47962010._002744.job.log.tgz.1
[2026-01-10 18:58:52]  mtime=0
[2026-01-10 18:58:52]  protocol_id=None
[2026-01-10 18:58:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 18:58:52]  replicas=None
[2026-01-10 18:58:52]  scope=mc16_13TeV
[2026-01-10 18:58:52]  status=None
[2026-01-10 18:58:52]  status_code=0
[2026-01-10 18:58:52]  storage_token=
[2026-01-10 18:58:52]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6965803292/log.47962010._002744.job.log.tgz.1
[2026-01-10 18:58:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/be/df/log.47962010._002744.job.log.tgz.1
[2026-01-10 18:58:52]  workdir=None
[2026-01-10 18:58:52] ]
[2026-01-10 18:58:52] 2026-01-10 23:58:12,151 | INFO     | transferring file log.47962010._002744.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6965803292/log.47962010._002744.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 18:58:52] 2026-01-10 23:58:12,151 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6965803292/log.47962010._002744.job.log.tgz.1 /tmp/boinchome/slots/1/log.47962010._002744.job
[2026-01-10 18:58:52] 2026-01-10 23:58:12,170 | INFO     | adding to output.list: log.47962010._002744.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/be/df/log.47962010._002744.job.log.tgz.
[2026-01-10 18:58:52] 2026-01-10 23:58:12,171 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 18:58:52] 2026-01-10 23:58:12,171 | INFO     | summary of transferred files:
[2026-01-10 18:58:52] 2026-01-10 23:58:12,171 | INFO     |  -- lfn=log.47962010._002744.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 18:58:52] 2026-01-10 23:58:12,171 | INFO     | stage-out finished correctly
[2026-01-10 18:58:52] 2026-01-10 23:58:12,177 | INFO     | time since job start (2861s) is within the limit (349056.0s)
[2026-01-10 18:58:52] 2026-01-10 23:58:12,241 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 18:58:52] 2026-01-10 23:58:13,502 | INFO     | job 6965803292 has state=finished
[2026-01-10 18:58:52] 2026-01-10 23:58:13,503 | INFO     | preparing for final server update for job 6965803292 in state='finished'
[2026-01-10 18:58:52] 2026-01-10 23:58:13,503 | INFO     | this job has now completed (state=finished)
[2026-01-10 18:58:52] 2026-01-10 23:58:13,503 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 18:58:52] 2026-01-10 23:58:13,503 | INFO     | log transfer has been attempted: DONE
[2026-01-10 18:58:52] 2026-01-10 23:58:13,503 | INFO     | job 6965803292 has finished - writing final server update
[2026-01-10 18:58:52] 2026-01-10 23:58:13,503 | INFO     | total number of processed events: 50 (read)
[2026-01-10 18:58:52] 2026-01-10 23:58:13,504 | INFO     | executing command: lscpu
[2026-01-10 18:58:52] 2026-01-10 23:58:13,566 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 18:58:52] 2026-01-10 23:58:14,193 | INFO     | time since job start (2863s) is within the limit (349056.0s)
[2026-01-10 18:58:52] 2026-01-10 23:58:16,198 | INFO     | time since job start (2865s) is within the limit (349056.0s)
[2026-01-10 18:58:52] 2026-01-10 23:58:18,049 | WARNING  | process 239943 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 18:58:52] 2026-01-10 23:58:18,049 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965803292/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 18:58:52] 2026-01-10 23:58:18,204 | INFO     | time since job start (2867s) is within the limit (349056.0s)
[2026-01-10 18:58:52] 2026-01-10 23:58:18,533 | INFO     | number of running child processes to parent process 239943: 1
[2026-01-10 18:58:52] 2026-01-10 23:58:18,533 | INFO     | maximum number of monitored processes: 15
[2026-01-10 18:58:52] 2026-01-10 23:58:18,991 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 18:58:52] 2026-01-10 23:58:19,003 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3294.0200104166674
[2026-01-10 18:58:52] 2026-01-10 23:58:19,015 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965803292/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 18:58:52] 2026-01-10 23:58:19,016 | INFO     | extracted standard info from prmon json
[2026-01-10 18:58:52] 2026-01-10 23:58:19,016 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 18:58:52] 2026-01-10 23:58:19,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 18:58:52] 2026-01-10 23:58:19,017 | INFO     | fitting pss+swap vs Time
[2026-01-10 18:58:52] 2026-01-10 23:58:19,018 | INFO     | sum of square deviations: 19849119.975
[2026-01-10 18:58:52] 2026-01-10 23:58:19,018 | INFO     | sum of deviations: 1820145458.124998
[2026-01-10 18:58:52] 2026-01-10 23:58:19,018 | INFO     | mean x: 1768088155.725
[2026-01-10 18:58:52] 2026-01-10 23:58:19,018 | INFO     | mean y: 2617867.375
[2026-01-10 18:58:52] 2026-01-10 23:58:19,018 | INFO     | intersect: -162129387494.1102
[2026-01-10 18:58:52] 2026-01-10 23:58:19,018 | INFO     | chi2: 0.1565304428738577
[2026-01-10 18:58:52] 2026-01-10 23:58:19,018 | INFO     | current memory leak: 91.70 B/s (using 40 data points, chi2=0.16)
[2026-01-10 18:58:52] 2026-01-10 23:58:19,018 | INFO     | could have reported an average CPU frequency of 3333 MHz (5 samples)
[2026-01-10 18:58:52] 2026-01-10 23:58:19,019 | INFO     | ..............................
[2026-01-10 18:58:52] 2026-01-10 23:58:19,019 | INFO     | . Timing measurements:
[2026-01-10 18:58:52] 2026-01-10 23:58:19,019 | INFO     | . get job = 0 s
[2026-01-10 18:58:52] 2026-01-10 23:58:19,019 | INFO     | . initial setup = 2 s
[2026-01-10 18:58:52] 2026-01-10 23:58:19,019 | INFO     | . payload setup = 7 s
[2026-01-10 18:58:52] 2026-01-10 23:58:19,019 | INFO     | . stage-in = 0 s
[2026-01-10 18:58:52] 2026-01-10 23:58:19,019 | INFO     | . payload execution = 2833 s
[2026-01-10 18:58:52] 2026-01-10 23:58:19,019 | INFO     | . stage-out = 0 s
[2026-01-10 18:58:52] 2026-01-10 23:58:19,019 | INFO     | . log creation = 0 s
[2026-01-10 18:58:52] 2026-01-10 23:58:19,019 | INFO     | ..............................
[2026-01-10 18:58:52] 2026-01-10 23:58:19,087 | INFO     | 
[2026-01-10 18:58:52] 2026-01-10 23:58:19,088 | INFO     | job summary report
[2026-01-10 18:58:52] 2026-01-10 23:58:19,088 | INFO     | --------------------------------------------------
[2026-01-10 18:58:52] 2026-01-10 23:58:19,089 | INFO     | PanDA job id: 6965803292
[2026-01-10 18:58:52] 2026-01-10 23:58:19,089 | INFO     | task id: 47962010
[2026-01-10 18:58:52] 2026-01-10 23:58:19,089 | INFO     | errors: (none)
[2026-01-10 18:58:52] 2026-01-10 23:58:19,089 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 18:58:52] 2026-01-10 23:58:19,089 | INFO     | pilot state: finished 
[2026-01-10 18:58:52] 2026-01-10 23:58:19,089 | INFO     | transexitcode: 0
[2026-01-10 18:58:52] 2026-01-10 23:58:19,089 | INFO     | exeerrorcode: 0
[2026-01-10 18:58:52] 2026-01-10 23:58:19,089 | INFO     | exeerrordiag: 
[2026-01-10 18:58:52] 2026-01-10 23:58:19,089 | INFO     | exitcode: 0
[2026-01-10 18:58:52] 2026-01-10 23:58:19,089 | INFO     | exitmsg: OK
[2026-01-10 18:58:52] 2026-01-10 23:58:19,089 | INFO     | cpuconsumptiontime: 10262 s
[2026-01-10 18:58:52] 2026-01-10 23:58:19,112 | INFO     | nevents: 50
[2026-01-10 18:58:52] 2026-01-10 23:58:19,112 | INFO     | neventsw: 0
[2026-01-10 18:58:52] 2026-01-10 23:58:19,112 | INFO     | pid: 239943
[2026-01-10 18:58:52] 2026-01-10 23:58:19,113 | INFO     | pgrp: 239943
[2026-01-10 18:58:52] 2026-01-10 23:58:19,113 | INFO     | corecount: 10
[2026-01-10 18:58:52] 2026-01-10 23:58:19,113 | INFO     | event service: False
[2026-01-10 18:58:52] 2026-01-10 23:58:19,113 | INFO     | sizes: {0: 2284569, 1: 2284569, 6: 2284859, 11: 2284887, 2844: 2310907, 2845: 2320085, 2852: 2320307}
[2026-01-10 18:58:52] 2026-01-10 23:58:19,113 | INFO     | --------------------------------------------------
[2026-01-10 18:58:52] 2026-01-10 23:58:19,113 | INFO     | 
[2026-01-10 18:58:52] 2026-01-10 23:58:19,113 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 18:58:52] 2026-01-10 23:58:19,146 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 18:58:52] 2026-01-10 23:58:19,146 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 18:58:52] 2026-01-10 23:58:19,146 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 18:58:52] 2026-01-10 23:58:19,146 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 18:58:52] 2026-01-10 23:58:19,147 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 18:58:52] 2026-01-10 23:58:19,147 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 18:58:52] 2026-01-10 23:58:19,147 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 18:58:52] 2026-01-10 23:58:19,147 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 18:58:52] 2026-01-10 23:58:19,147 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 18:58:52] 2026-01-10 23:58:19,147 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 18:58:52] 2026-01-10 23:58:19,147 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 18:58:52] 2026-01-10 23:58:19,147 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 18:58:52] 2026-01-10 23:58:19,147 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 18:58:52] 2026-01-10 23:58:19,147 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 18:58:52] 2026-01-10 23:58:19,147 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 18:58:52] 2026-01-10 23:58:19,147 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 18:58:52] 2026-01-10 23:58:19,147 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 18:58:52] 2026-01-10 23:58:19,148 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 18:58:52] 2026-01-10 23:58:19,148 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 18:58:52] 2026-01-10 23:58:19,148 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 18:58:52] 2026-01-10 23:58:19,148 | INFO     | job 6965803292 has completed (purged errors)
[2026-01-10 18:58:52] 2026-01-10 23:58:19,148 | INFO     | overall cleanup function is called
[2026-01-10 18:58:52] 2026-01-10 23:58:20,254 | INFO     | --- collectZombieJob: --- 10, [239943]
[2026-01-10 18:58:52] 2026-01-10 23:58:20,254 | INFO     | zombie collector waiting for pid 239943
[2026-01-10 18:58:52] 2026-01-10 23:58:20,255 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 18:58:52] 2026-01-10 23:58:20,255 | INFO     | collected zombie processes
[2026-01-10 18:58:52] 2026-01-10 23:58:20,255 | INFO     | will attempt to kill all subprocesses of pid=239943
[2026-01-10 18:58:52] 2026-01-10 23:58:20,761 | INFO     | process IDs to be killed: [239943] (in reverse order)
[2026-01-10 18:58:52] 2026-01-10 23:58:20,933 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 18:58:52] 2026-01-10 23:58:20,933 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 18:58:52] 2026-01-10 23:58:20,953 | INFO     | did not find any defunct processes belonging to 239943
[2026-01-10 18:58:52] 2026-01-10 23:58:20,974 | INFO     | did not find any defunct processes belonging to 239943
[2026-01-10 18:58:52] 2026-01-10 23:58:20,974 | INFO     | ready for new job
[2026-01-10 18:58:52] 2026-01-10 23:58:20,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 18:58:52] 2026-01-10 23:58:20,977 | INFO     | ***************************************
[2026-01-10 18:58:52] 2026-01-10 23:58:20,977 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 18:58:52] 2026-01-10 23:58:20,977 | INFO     | ***************************************
[2026-01-10 18:58:52] 2026-01-10 23:58:20,977 | INFO     | 
[2026-01-10 18:58:52] 2026-01-10 23:58:20,987 | INFO     | architecture information:
[2026-01-10 18:58:52] 2026-01-10 23:58:20,988 | INFO     | executing command: cat /etc/os-release
[2026-01-10 18:58:52] 2026-01-10 23:58:21,007 | INFO     | cat /etc/os-release:
[2026-01-10 18:58:52] NAME="CentOS Linux"
[2026-01-10 18:58:52] VERSION="7 (Core)"
[2026-01-10 18:58:52] ID="centos"
[2026-01-10 18:58:52] ID_LIKE="rhel fedora"
[2026-01-10 18:58:52] VERSION_ID="7"
[2026-01-10 18:58:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 18:58:52] ANSI_COLOR="0;31"
[2026-01-10 18:58:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 18:58:52] HOME_URL="https://www.centos.org/"
[2026-01-10 18:58:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 18:58:52] 
[2026-01-10 18:58:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 18:58:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 18:58:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 18:58:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 18:58:52] 
[2026-01-10 18:58:52] 2026-01-10 23:58:21,007 | INFO     | ***************************************
[2026-01-10 18:58:52] 2026-01-10 23:58:21,510 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 18:58:52] 2026-01-10 23:58:21,528 | INFO     | sufficient remaining disk space (75565629440 B)
[2026-01-10 18:58:52] 2026-01-10 23:58:21,529 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 18:58:52] 2026-01-10 23:58:21,529 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 18:58:52] 2026-01-10 23:58:21,529 | INFO     | update_server=False
[2026-01-10 18:58:52] 2026-01-10 23:58:21,529 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 18:58:52] 2026-01-10 23:58:21,611 | INFO     | all data control threads have been joined
[2026-01-10 18:58:52] 2026-01-10 23:58:22,041 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 18:58:52] 2026-01-10 23:58:22,041 | INFO     | aborting loop
[2026-01-10 18:58:52] 2026-01-10 23:58:22,438 | INFO     | all payload control threads have been joined
[2026-01-10 18:58:52] 2026-01-10 23:58:22,534 | INFO     | [job] retrieve thread has finished
[2026-01-10 18:58:52] 2026-01-10 23:58:22,616 | INFO     | [data] control thread has finished
[2026-01-10 18:58:52] 2026-01-10 23:58:22,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 18:58:52] 2026-01-10 23:58:22,822 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 18:58:52] 2026-01-10 23:58:22,925 | INFO     | all job control threads have been joined
[2026-01-10 18:58:52] 2026-01-10 23:58:22,946 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 18:58:52] 2026-01-10 23:58:23,029 | INFO     | [data] copytool_in thread has finished
[2026-01-10 18:58:52] 2026-01-10 23:58:23,058 | INFO     | [job] job monitor thread has finished
[2026-01-10 18:58:52] 2026-01-10 23:58:23,444 | INFO     | [payload] control thread has finished
[2026-01-10 18:58:52] 2026-01-10 23:58:23,644 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 18:58:52] 2026-01-10 23:58:23,677 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 18:58:52] 2026-01-10 23:58:23,742 | INFO     | [payload] validate_post thread has finished
[2026-01-10 18:58:52] 2026-01-10 23:58:23,861 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 18:58:52] 2026-01-10 23:58:23,881 | INFO     | [job] validate thread has finished
[2026-01-10 18:58:52] 2026-01-10 23:58:23,930 | INFO     | [job] control thread has finished
[2026-01-10 18:58:52] 2026-01-10 23:58:24,061 | INFO     | [payload] failed_post thread has finished
[2026-01-10 18:58:52] 2026-01-10 23:58:24,099 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 18:58:52] 2026-01-10 23:58:24,774 | INFO     | [data] copytool_out thread has finished
[2026-01-10 18:58:52] 2026-01-10 23:58:25,104 | INFO     | [job] queue monitor thread has finished
[2026-01-10 18:58:52] 2026-01-10 23:58:26,829 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 18:58:52] 2026-01-10 23:58:35,355 | INFO     | [monitor] cgroup control has ended
[2026-01-10 18:58:52] 2026-01-10 23:58:35,534 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140498086352704)>', '<ExcThread(monitor, started 140497154725632)>']
[2026-01-10 18:58:52] 2026-01-10 23:58:40,560 | INFO     | all workflow threads have been joined
[2026-01-10 18:58:52] 2026-01-10 23:58:40,560 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 18:58:52] 2026-01-10 23:58:40,561 | INFO     | traces error code: 0
[2026-01-10 18:58:52] 2026-01-10 23:58:40,562 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 18:58:52] 2026-01-10 23:58:50,304 | INFO     | 2872s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-10 18:58:52] 2026-01-10 23:58:51,794 | INFO     | PID=213130 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 18:58:52] 2026-01-10 23:58:51,794 | INFO     | .. there are 26 such processes running
[2026-01-10 18:58:52] 2026-01-10 23:58:51,794 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 18:58:52] 2026-01-10 23:58:51,794 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 18:58:52] 2026-01-10 23:58:51,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 18:58:52] 2026-01-10 23:58:51,794 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 18:58:52] 2026-01-10 23:58:51,794 | INFO     | [monitor] control thread has ended
[2026-01-10 18:58:52] 2026-01-10 23:58:52,107 [wrapper] ==== pilot stdout END ====
[2026-01-10 18:58:52] 2026-01-10 23:58:52,111 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 18:58:52] 2026-01-10 23:58:52,113 [wrapper] pilotpid: 213130
[2026-01-10 18:58:52] 2026-01-10 23:58:52,116 [wrapper] Pilot exit status: 0
[2026-01-10 18:58:52] 2026-01-10 23:58:52,158 [wrapper] pandaids: 6965803292
[2026-01-10 18:58:52] 2026-01-10 23:58:52,276 [wrapper] cleanup supervisor_pilot  609345 213131
[2026-01-10 18:58:52] 2026-01-10 23:58:52,281 [wrapper] Test setup, not cleaning
[2026-01-10 18:58:52] 2026-01-10 23:58:52,284 [wrapper] apfmon messages muted
[2026-01-10 18:58:52] 2026-01-10 23:58:52,286 [wrapper] ==== wrapper stdout END ====
[2026-01-10 18:58:52] 2026-01-10 23:58:52,289 [wrapper] ==== wrapper stderr END ====
[2026-01-10 18:58:52]  *** Error codes and diagnostics ***
[2026-01-10 18:58:52]     "exeErrorCode": 0,
[2026-01-10 18:58:52]     "exeErrorDiag": "",
[2026-01-10 18:58:52]     "pilotErrorCode": 0,
[2026-01-10 18:58:52]     "pilotErrorDiag": "",
[2026-01-10 18:58:52]  *** Listing of results directory ***
[2026-01-10 18:58:52] total 429724
[2026-01-10 18:58:52] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-10 18:58:52] -rwx------. 1 boincer umatlas     36322 Jan 10 18:05 runpilot2-wrapper.sh
[2026-01-10 18:58:52] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-10 18:58:52] -rw-r--r--. 1 boincer umatlas       100 Jan 10 18:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 18:58:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 18:10 run_atlas
[2026-01-10 18:58:52] -rw-r--r--. 1 boincer umatlas       105 Jan 10 18:10 job.xml
[2026-01-10 18:58:52] -rw-r--r--. 2 boincer umatlas 392755774 Jan 10 18:10 EVNT.47962006._000073.pool.root.1
[2026-01-10 18:58:52] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 18:58:52] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 18:10 shared
[2026-01-10 18:58:52] -rw-r--r--. 2 boincer umatlas    592614 Jan 10 18:10 input.tar.gz
[2026-01-10 18:58:52] -rw-r--r--. 1 boincer umatlas         0 Jan 10 18:10 boinc_lockfile
[2026-01-10 18:58:52] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 18:10 pandaJob.out
[2026-01-10 18:58:52] -rw-------. 1 boincer umatlas        57 Jan 10 18:10 setup.sh.local
[2026-01-10 18:58:52] -rw-------. 1 boincer umatlas    989548 Jan 10 18:10 agis_schedconf.cvmfs.json
[2026-01-10 18:58:52] -rw-------. 1 boincer umatlas   1516240 Jan 10 18:10 agis_ddmendpoints.agis.ALL.json
[2026-01-10 18:58:52] drwx------. 5 boincer umatlas      4096 Jan 10 18:10 pilot3
[2026-01-10 18:58:52] -rw-r--r--. 1 boincer umatlas       529 Jan 10 18:52 boinc_task_state.xml
[2026-01-10 18:58:52] -rw-------. 1 boincer umatlas  39718476 Jan 10 18:57 HITS.47962010._002744.pool.root.1
[2026-01-10 18:58:52] -rw-------. 1 boincer umatlas      1033 Jan 10 18:58 memory_monitor_summary.json
[2026-01-10 18:58:52] -rw-------. 1 boincer umatlas   1378491 Jan 10 18:58 log.47962010._002744.job.log.tgz.1
[2026-01-10 18:58:52] -rw-------. 1 boincer umatlas      8540 Jan 10 18:58 heartbeat.json
[2026-01-10 18:58:52] -rw-------. 1 boincer umatlas        95 Jan 10 18:58 pilot_heartbeat.json
[2026-01-10 18:58:52] -rw-r--r--. 1 boincer umatlas      6942 Jan 10 18:58 init_data.xml
[2026-01-10 18:58:52] -rw-r--r--. 1 boincer umatlas        26 Jan 10 18:58 wrapper_checkpoint.txt
[2026-01-10 18:58:52] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 18:58 boinc_mmap_file
[2026-01-10 18:58:52] -rw-------. 1 boincer umatlas       937 Jan 10 18:58 pilotlog.txt
[2026-01-10 18:58:52] -rw-------. 1 boincer umatlas    448006 Jan 10 18:58 log.47962010._002744.job.log.1
[2026-01-10 18:58:52] -rw-------. 1 boincer umatlas       353 Jan 10 18:58 output.list
[2026-01-10 18:58:52] -rw-r--r--. 1 boincer umatlas       620 Jan 10 18:58 runtime_log
[2026-01-10 18:58:52] -rw-------. 1 boincer umatlas   1843200 Jan 10 18:58 result.tar.gz
[2026-01-10 18:58:52] -rw-------. 1 boincer umatlas       652 Jan 10 18:58 VUOKDmJCxy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVehKDmZeLJQn.diag
[2026-01-10 18:58:52] -rw-r--r--. 1 boincer umatlas      9339 Jan 10 18:58 runtime_log.err
[2026-01-10 18:58:52] -rw-r--r--. 1 boincer umatlas     21654 Jan 10 18:58 stderr.txt
[2026-01-10 18:58:52] HITS file was successfully produced:
[2026-01-10 18:58:52] -rw-------. 1 boincer umatlas 39718476 Jan 10 18:57 shared/HITS.pool.root.1
[2026-01-10 18:58:52]  *** Contents of shared directory: ***
[2026-01-10 18:58:52] total 424740
[2026-01-10 18:58:52] -rw-r--r--. 2 boincer umatlas 392755774 Jan 10 18:10 ATLAS.root_0
[2026-01-10 18:58:52] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 18:10 start_atlas.sh
[2026-01-10 18:58:52] -rw-r--r--. 2 boincer umatlas    592614 Jan 10 18:10 input.tar.gz
[2026-01-10 18:58:52] -rw-------. 1 boincer umatlas  39718476 Jan 10 18:57 HITS.pool.root.1
[2026-01-10 18:58:52] -rw-------. 1 boincer umatlas   1843200 Jan 10 18:58 result.tar.gz
18:58:53 (207466): run_atlas exited; CPU time 10246.178764
18:58:53 (207466): called boinc_finish(0)

</stderr_txt>
]]>

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